Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358800 | XP_003610089.2 | 95.068 | 811 | 17 | 2 | 1 | 811 | 1 | 788 | 0.0 | 1576 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358800 | sp|Q7ZVR1|WDR75_DANRE | 25.562 | 845 | 497 | 25 | 3 | 811 | 13 | 761 | 9.20e-57 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358800 | G7JUE1 | 95.068 | 811 | 17 | 2 | 1 | 811 | 1 | 788 | 0.0 | 1576 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1358800 | Msa1361480 | 0.910663 | 1.456087e-82 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358800 | MtrunA17_Chr4g0072211 | 95.068 | 811 | 17 | 2 | 1 | 811 | 1 | 788 | 0.0 | 1576 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358800 | AT2G18900.1 | 55.006 | 829 | 327 | 9 | 2 | 811 | 3 | 804 | 0.0 | 914 |
| Msa1358800 | AT3G26480.1 | 42.080 | 827 | 380 | 17 | 1 | 806 | 2 | 750 | 0.0 | 611 |
| Msa1358800 | AT3G26480.2 | 43.018 | 709 | 324 | 15 | 1 | 689 | 2 | 650 | 0.0 | 547 |
Find 201 sgRNAs with CRISPR-Local
Find 521 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTTATTTGTTTGAAATTC+TGG | 0.092005 | tig0016540:-3808 | Msa1358800:CDS |
| TAGTCCCTGTGGGAAATTTC+TGG | 0.137918 | tig0016540:-6407 | Msa1358800:CDS |
| ACACATTTCTGCTTATTAAT+AGG | 0.159225 | tig0016540:-3596 | Msa1358800:CDS |
| ACTGAAACTCTCTGAATTTC+AGG | 0.167837 | tig0016540:+7652 | None:intergenic |
| TACCTCTTTCAATGTAATTA+TGG | 0.186644 | tig0016540:+7052 | None:intergenic |
| AGAGAGTACCATGGAGAAAA+TGG | 0.188882 | tig0016540:+7307 | None:intergenic |
| ATTTGGTGCTAAGAACTTTC+AGG | 0.214057 | tig0016540:-6206 | Msa1358800:CDS |
| GATGGAGTCTATTTGTATTC+AGG | 0.226447 | tig0016540:-6046 | Msa1358800:intron |
| AAACAGACGTTCCTTTGATT+TGG | 0.242307 | tig0016540:+1997 | None:intergenic |
| ACACTGCTTACATATTTAAA+TGG | 0.253048 | tig0016540:-787 | Msa1358800:CDS |
| TATATTAAAGATCTCTTCTA+TGG | 0.256739 | tig0016540:-5341 | Msa1358800:CDS |
| CACATTTCTGCTTATTAATA+GGG | 0.258757 | tig0016540:-3595 | Msa1358800:CDS |
| AGATCTTTAATATATGAATT+TGG | 0.260390 | tig0016540:+5350 | None:intergenic |
| TTGTTTGAAATTCTGGGATT+TGG | 0.264801 | tig0016540:-3801 | Msa1358800:CDS |
| GCAGCCTTTGACCGCTCTTC+TGG | 0.272718 | tig0016540:-4630 | Msa1358800:CDS |
| TCAAAGGAACGTCTGTTTAA+AGG | 0.285658 | tig0016540:-1992 | Msa1358800:CDS |
| ATCCTATTCCAGTGGCTTCC+TGG | 0.299526 | tig0016540:-1937 | Msa1358800:CDS |
| GGTGGACATTGAAAATCTTT+TGG | 0.303410 | tig0016540:+3769 | None:intergenic |
| TCTTTCAGATATGGGTTTGC+AGG | 0.310406 | tig0016540:-3416 | Msa1358800:intron |
| TATCTTCTTTCCGTATCTTA+TGG | 0.315540 | tig0016540:-2364 | Msa1358800:CDS |
| AACAGACGTTCCTTTGATTT+GGG | 0.332736 | tig0016540:+1998 | None:intergenic |
| AGACCTCCTATTCCTTCTTC+AGG | 0.339151 | tig0016540:+3827 | None:intergenic |
| GAGATAATGAGGTCTATATC+AGG | 0.346516 | tig0016540:-5319 | Msa1358800:CDS |
| GCAGAATTAGAGTCCACTTT+AGG | 0.348714 | tig0016540:+6346 | None:intergenic |
| AATCTGTGCAGAACAAAGTT+TGG | 0.352179 | tig0016540:+7109 | None:intergenic |
| CTGCACCACAGCTGTCTGTT+TGG | 0.361408 | tig0016540:-2339 | Msa1358800:CDS |
| AATGAGCTCATTGCTGTTGT+AGG | 0.369186 | tig0016540:-2855 | Msa1358800:CDS |
| TCTTATTTGTTTGAAATTCT+GGG | 0.369586 | tig0016540:-3807 | Msa1358800:CDS |
| TAGCAAACAAGCTGTAGAAT+TGG | 0.385555 | tig0016540:+4574 | None:intergenic |
| TGCTAATCGTGGACTTTATG+AGG | 0.385797 | tig0016540:-4556 | Msa1358800:intron |
| TTTGTCCTCCCTTCATCGTT+CGG | 0.388349 | tig0016540:+7591 | None:intergenic |
| TGACCGCTCTTCTGGTTTAG+TGG | 0.389101 | tig0016540:-4622 | Msa1358800:CDS |
| ATGGCTGTCAGCGCATCTTA+TGG | 0.392854 | tig0016540:-3531 | Msa1358800:CDS |
| TAGCTGCATCTTGGTCATAT+AGG | 0.395220 | tig0016540:-2303 | Msa1358800:CDS |
| AGGAAGGAGTTCTCGTGCTT+TGG | 0.397994 | tig0016540:-5586 | Msa1358800:CDS |
| CGAAGCGGAGATCCAATTCT+TGG | 0.399101 | tig0016540:+5533 | None:intergenic |
| ATTGGGAGGCTCATCTTTGT+TGG | 0.406726 | tig0016540:-2397 | Msa1358800:CDS |
| CTTGTTGGGCTTGAAGAAAA+TGG | 0.408572 | tig0016540:-691 | Msa1358800:intron |
| GACCAGGAAGCCACTGGAAT+AGG | 0.410097 | tig0016540:+1935 | None:intergenic |
| TGGGAAATTTCTGGGCATAA+AGG | 0.423011 | tig0016540:-6398 | Msa1358800:CDS |
| AGTCCCTGTGGGAAATTTCT+GGG | 0.428071 | tig0016540:-6406 | Msa1358800:CDS |
| GCAATGAGCTCATTCTTGTC+AGG | 0.429752 | tig0016540:+2864 | None:intergenic |
| TTACAAGTTTCCTCCCTTGA+CGG | 0.430747 | tig0016540:-7473 | Msa1358800:CDS |
| TCATATAGGATTCAAATAGA+AGG | 0.434901 | tig0016540:-2289 | Msa1358800:intron |
| TTCCATAATTACATTGAAAG+AGG | 0.437023 | tig0016540:-7054 | Msa1358800:intron |
| GTTTCATCCGACCCGTCATA+TGG | 0.439794 | tig0016540:-3550 | Msa1358800:CDS |
| ATCTGTGCAGAACAAAGTTT+GGG | 0.441289 | tig0016540:+7110 | None:intergenic |
| AACTTGTAAGGCGGTGGTGG+TGG | 0.441877 | tig0016540:+7487 | None:intergenic |
| ATGCCATGTGGAACATGATT+CGG | 0.443721 | tig0016540:+6108 | None:intergenic |
| GTAGGTAACAATGTTTGAAC+CGG | 0.444501 | tig0016540:+7415 | None:intergenic |
| CGACGGCACCATCCGCCATT+GGG | 0.450628 | tig0016540:-7375 | Msa1358800:CDS |
| GTGGCTGCAGGCGATGTAAC+CGG | 0.453400 | tig0016540:-6250 | Msa1358800:CDS |
| AACTTTGTTCTGCACAGATT+AGG | 0.455949 | tig0016540:-7106 | Msa1358800:CDS |
| ATCTTATGGTGGAGATTTCA+AGG | 0.457592 | tig0016540:-3517 | Msa1358800:intron |
| GTTGGATGTGCCATGCTGTT+GGG | 0.457899 | tig0016540:-3353 | Msa1358800:CDS |
| GTCTACTGACGGCTCTATGA+TGG | 0.459696 | tig0016540:-3870 | Msa1358800:CDS |
| ACCGAGGCAAATGAAGGATC+TGG | 0.461506 | tig0016540:+5494 | None:intergenic |
| AACTAAAATTCCGACTTGTC+TGG | 0.461815 | tig0016540:+3373 | None:intergenic |
| TCGACGGCACCATCCGCCAT+TGG | 0.462170 | tig0016540:-7376 | Msa1358800:CDS |
| TTCAGGTAGCTTGACTTCTA+CGG | 0.462358 | tig0016540:+3844 | None:intergenic |
| AGTTGGATGTGCCATGCTGT+TGG | 0.463893 | tig0016540:-3354 | Msa1358800:CDS |
| CAAACATTGTTACCTACTGT+TGG | 0.466565 | tig0016540:-7409 | Msa1358800:CDS |
| TCACGTGCTTCCTTGTCATA+TGG | 0.467300 | tig0016540:+739 | None:intergenic |
| ATGGAATGCAAGAACGGAAA+AGG | 0.471744 | tig0016540:+6288 | None:intergenic |
| GATGGTGCCGTCGAGGGAAG+AGG | 0.472827 | tig0016540:+7385 | None:intergenic |
| AAGCTACCTGAAGAAGGAAT+AGG | 0.474205 | tig0016540:-3833 | Msa1358800:CDS |
| ACTGATGAGGAATGTAAGCC+TGG | 0.474768 | tig0016540:-6151 | Msa1358800:CDS |
| TCCAGATCCTTCATTTGCCT+CGG | 0.479151 | tig0016540:-5495 | Msa1358800:intron |
| GAAGATAGCGACGGAGGTGC+CGG | 0.479976 | tig0016540:+7511 | None:intergenic |
| GAGAGTACCATGGAGAAAAT+GGG | 0.480340 | tig0016540:+7308 | None:intergenic |
| CATACCGTGACCTCGTCAAC+TGG | 0.480508 | tig0016540:+4046 | None:intergenic |
| CTATGCAGGATGATCTTGTT+GGG | 0.481211 | tig0016540:-705 | Msa1358800:CDS |
| AAGAAGAATGGAGGCGCCAA+GGG | 0.482949 | tig0016540:+7687 | None:intergenic |
| AAAAGCAATGCTCCCTCCCT+TGG | 0.482991 | tig0016540:+831 | None:intergenic |
| CGATACTGTTATTACATTGT+GGG | 0.484758 | tig0016540:-2889 | Msa1358800:CDS |
| CAAGAATTGGATCTCCGCTT+CGG | 0.485117 | tig0016540:-5532 | Msa1358800:CDS |
| GCTGTACAAACAGATAATTA+TGG | 0.491659 | tig0016540:-4600 | Msa1358800:CDS |
| CACTGAGCACCGAACGATGA+AGG | 0.491940 | tig0016540:-7600 | Msa1358800:exon |
| ACAAAGATGAGCCTCCCAAT+TGG | 0.495393 | tig0016540:+2400 | None:intergenic |
| TAGAAGACGGTCGCCGGAGT+TGG | 0.495515 | tig0016540:+7541 | None:intergenic |
| CCTCCATCTTTCTCCAACTC+CGG | 0.496290 | tig0016540:-7554 | Msa1358800:CDS |
| CCTTCAGATATATTAGAAAG+TGG | 0.496992 | tig0016540:-3624 | Msa1358800:CDS |
| TACAGCTTGTTTGCTAATCG+TGG | 0.498916 | tig0016540:-4567 | Msa1358800:CDS |
| GCAAAAGAGAAGAAGAAGAA+TGG | 0.501951 | tig0016540:+7675 | None:intergenic |
| GAAGAAGAATGGAGGCGCCA+AGG | 0.504741 | tig0016540:+7686 | None:intergenic |
| ACCTCCGTCATCGTCGTCCC+CGG | 0.504848 | tig0016540:-7434 | Msa1358800:CDS |
| AATCATGTTCCACATGGCAT+TGG | 0.506867 | tig0016540:-6105 | Msa1358800:CDS |
| ACTATGCAGGATGATCTTGT+TGG | 0.508221 | tig0016540:-706 | Msa1358800:CDS |
| GGAAACTTGTAAGGCGGTGG+TGG | 0.510621 | tig0016540:+7484 | None:intergenic |
| TGTCAAAGTTAGCTGCATCT+TGG | 0.514959 | tig0016540:-2312 | Msa1358800:CDS |
| AGCTGATGGTTCTGTGCTTG+CGG | 0.519424 | tig0016540:-2919 | Msa1358800:CDS |
| GAGGTCTATATCAGGGATCA+AGG | 0.523694 | tig0016540:-5311 | Msa1358800:intron |
| AAGAGCGGTCAAAGGCTGCT+TGG | 0.523886 | tig0016540:+4634 | None:intergenic |
| CTGAAACTCTCTGAATTTCA+GGG | 0.524346 | tig0016540:+7653 | None:intergenic |
| TATATGGAAAGTTCCTAAAG+TGG | 0.526039 | tig0016540:-6359 | Msa1358800:CDS |
| TTTATAATAGGTGGGAAGGA+AGG | 0.526948 | tig0016540:-5602 | Msa1358800:intron |
| GTCAAGGGAGGAAACTTGTA+AGG | 0.528574 | tig0016540:+7475 | None:intergenic |
| CACAGGGACTAACGATCAAA+GGG | 0.532091 | tig0016540:+6419 | None:intergenic |
| GAACGTCTGTTTAAAGGTGA+TGG | 0.533073 | tig0016540:-1986 | Msa1358800:CDS |
| ACCTGTGAGGTTCATAAACA+AGG | 0.536448 | tig0016540:+3747 | None:intergenic |
| TTCAGTGGTACTACCTCCCT+TGG | 0.537951 | tig0016540:-7703 | Msa1358800:five_prime_UTR |
| TCGCCGGAGTTGGAGAAAGA+TGG | 0.538335 | tig0016540:+7551 | None:intergenic |
| GCAGCCACAATCCTCTCAGT+TGG | 0.539224 | tig0016540:+6265 | None:intergenic |
| GTTACAGACCAGGAAGCCAC+TGG | 0.539338 | tig0016540:+1929 | None:intergenic |
| TGCTCTCATTCCCAAATCAA+AGG | 0.540226 | tig0016540:-2008 | Msa1358800:CDS |
| CCGATACTGTTATTACATTG+TGG | 0.540808 | tig0016540:-2890 | Msa1358800:CDS |
| CCACAATCCTCTCAGTTGGA+TGG | 0.541489 | tig0016540:+6269 | None:intergenic |
| ACTCTCACCGAGGCAAATGA+AGG | 0.542459 | tig0016540:+5488 | None:intergenic |
| CCCTTGTTTATGAACCTCAC+AGG | 0.543669 | tig0016540:-3748 | Msa1358800:intron |
| GGCTTCCTGGTCTGTAACGA+AGG | 0.545184 | tig0016540:-1924 | Msa1358800:intron |
| GAAGTCAAGCTACCTGAAGA+AGG | 0.545252 | tig0016540:-3839 | Msa1358800:CDS |
| CCACAGGGACTAACGATCAA+AGG | 0.545877 | tig0016540:+6418 | None:intergenic |
| ATGGCGGATGGTGCCGTCGA+GGG | 0.547907 | tig0016540:+7379 | None:intergenic |
| ACTGAGAGGATTGTGGCTGC+AGG | 0.549542 | tig0016540:-6262 | Msa1358800:CDS |
| ATATGATAAATCTAATGCAC+AGG | 0.550493 | tig0016540:+2042 | None:intergenic |
| CCTTTGATCGTTAGTCCCTG+TGG | 0.550626 | tig0016540:-6418 | Msa1358800:CDS |
| GACCGTCTTCTAGTCGGCTC+CGG | 0.551757 | tig0016540:-7530 | Msa1358800:CDS |
| TCTACTGACGGCTCTATGAT+GGG | 0.554140 | tig0016540:-3869 | Msa1358800:CDS |
| AGGAATGTAAGCCTGGGGTA+AGG | 0.555165 | tig0016540:-6144 | Msa1358800:CDS |
| CCACAATGTAATAACAGTAT+CGG | 0.556260 | tig0016540:+2890 | None:intergenic |
| TGAGCTTAATATGACTATGC+AGG | 0.557854 | tig0016540:-719 | Msa1358800:CDS |
| GCCGACTAGAAGACGGTCGC+CGG | 0.558169 | tig0016540:+7535 | None:intergenic |
| ATAGACTCCATCTGAAGAGA+AGG | 0.559080 | tig0016540:+6057 | None:intergenic |
| CAATACCTTCGTTACAGACC+AGG | 0.561180 | tig0016540:+1919 | None:intergenic |
| AGTATCGGTGTGACCGTCAA+GGG | 0.562310 | tig0016540:+7460 | None:intergenic |
| CCACTTTCTAATATATCTGA+AGG | 0.563084 | tig0016540:+3624 | None:intergenic |
| TATTCTTTCAGCCAATTGGG+AGG | 0.564177 | tig0016540:-2411 | Msa1358800:intron |
| TGCGCTGACAGCCATATGAC+GGG | 0.567458 | tig0016540:+3539 | None:intergenic |
| ACTGAGCACCGAACGATGAA+GGG | 0.571623 | tig0016540:-7599 | Msa1358800:exon |
| CTTTCAGATATGGGTTTGCA+GGG | 0.572213 | tig0016540:-3415 | Msa1358800:intron |
| TCCTTATTCAGGCCAAGGGA+GGG | 0.574416 | tig0016540:-843 | Msa1358800:intron |
| TGGTGCAGAACCATAAGATA+CGG | 0.575595 | tig0016540:+2354 | None:intergenic |
| ATGCGCTGACAGCCATATGA+CGG | 0.576443 | tig0016540:+3538 | None:intergenic |
| TCTCTTCTATGGAGATAATG+AGG | 0.579103 | tig0016540:-5330 | Msa1358800:CDS |
| CTCCTTATTCAGGCCAAGGG+AGG | 0.579287 | tig0016540:-844 | Msa1358800:intron |
| AGTTGGATGGAATGCAAGAA+CGG | 0.583563 | tig0016540:+6282 | None:intergenic |
| CATATTTCTTGAGAAGACAA+AGG | 0.583774 | tig0016540:+4672 | None:intergenic |
| CTTTGATCGTTAGTCCCTGT+GGG | 0.584126 | tig0016540:-6417 | Msa1358800:CDS |
| CTACCTGAAGAAGGAATAGG+AGG | 0.587849 | tig0016540:-3830 | Msa1358800:CDS |
| CAGTATCGGTGTGACCGTCA+AGG | 0.588682 | tig0016540:+7459 | None:intergenic |
| GGAGGAAACTTGTAAGGCGG+TGG | 0.590494 | tig0016540:+7481 | None:intergenic |
| CCATCCAACTGAGAGGATTG+TGG | 0.594328 | tig0016540:-6269 | Msa1358800:CDS |
| CAATGAGCTCATTCTTGTCA+GGG | 0.598664 | tig0016540:+2865 | None:intergenic |
| TATGCCCAGAAATTTCCCAC+AGG | 0.602180 | tig0016540:+6402 | None:intergenic |
| ACTCTCCTTATTCAGGCCAA+GGG | 0.605057 | tig0016540:-847 | Msa1358800:intron |
| TGAACCGGGGACGACGATGA+CGG | 0.610939 | tig0016540:+7430 | None:intergenic |
| TAGGTAACAATGTTTGAACC+GGG | 0.612008 | tig0016540:+7416 | None:intergenic |
| GGAGAAATCCCAATGGCGGA+TGG | 0.612056 | tig0016540:+7367 | None:intergenic |
| ATGGTGGAGTTGTCTACTGA+CGG | 0.612208 | tig0016540:-3881 | Msa1358800:CDS |
| TGTTGGACCTCTTCCCTCGA+CGG | 0.613084 | tig0016540:-7392 | Msa1358800:CDS |
| CAGAACATCAATGACTGATG+AGG | 0.616046 | tig0016540:-6164 | Msa1358800:CDS |
| AAGAATGGAGGCGCCAAGGG+AGG | 0.616686 | tig0016540:+7690 | None:intergenic |
| CGCAACAGATCCTATTCCAG+TGG | 0.616768 | tig0016540:-1945 | Msa1358800:CDS |
| TCAACCAGTTGACGAGGTCA+CGG | 0.618650 | tig0016540:-4050 | Msa1358800:intron |
| CAAACCCTTATATGCTTCAG+TGG | 0.619467 | tig0016540:-7718 | None:intergenic |
| TGCCGGAGCCGACTAGAAGA+CGG | 0.620612 | tig0016540:+7528 | None:intergenic |
| TAAACCAGAAGAGCGGTCAA+AGG | 0.622616 | tig0016540:+4626 | None:intergenic |
| AGATAATGAGGTCTATATCA+GGG | 0.622880 | tig0016540:-5318 | Msa1358800:CDS |
| GAGGGAAGAGGTCCAACAGT+AGG | 0.627330 | tig0016540:+7397 | None:intergenic |
| GATACCATCGTTATTGTCAC+CGG | 0.628026 | tig0016540:-7204 | Msa1358800:CDS |
| AATGGCGGATGGTGCCGTCG+AGG | 0.629512 | tig0016540:+7378 | None:intergenic |
| GTGCTTTGGCAGCTAGACAC+CGG | 0.633010 | tig0016540:-5572 | Msa1358800:CDS |
| AGCAGAAAGACCAGACAAGT+CGG | 0.638688 | tig0016540:-3383 | Msa1358800:CDS |
| ATGCCCAGAAATTTCCCACA+GGG | 0.639581 | tig0016540:+6403 | None:intergenic |
| AAAGAGAAGAAGAAGAATGG+AGG | 0.640277 | tig0016540:+7678 | None:intergenic |
| ATCGGTGTGACCGTCAAGGG+AGG | 0.641445 | tig0016540:+7463 | None:intergenic |
| TTGCATTCCATCCAACTGAG+AGG | 0.642642 | tig0016540:-6276 | Msa1358800:CDS |
| GCTGTCAGCGCATCTTATGG+TGG | 0.643757 | tig0016540:-3528 | Msa1358800:CDS |
| TCTCTTTGATCCATATGACA+AGG | 0.644718 | tig0016540:-749 | Msa1358800:CDS |
| TCCGGCGACCGTCTTCTAGT+CGG | 0.645660 | tig0016540:-7536 | Msa1358800:CDS |
| GGACTAACGATCAAAGGGTG+AGG | 0.649796 | tig0016540:+6424 | None:intergenic |
| CCGGAGTTGGAGAAAGATGG+AGG | 0.653982 | tig0016540:+7554 | None:intergenic |
| GATGACGGAGGTGACAGTAT+CGG | 0.656068 | tig0016540:+7445 | None:intergenic |
| CCTGTGAGGTTCATAAACAA+GGG | 0.660359 | tig0016540:+3748 | None:intergenic |
| ACTTATATGACCCAACAGCA+TGG | 0.661286 | tig0016540:+3343 | None:intergenic |
| CTGATGAGGAATGTAAGCCT+GGG | 0.661805 | tig0016540:-6150 | Msa1358800:CDS |
| ATGCCGAATCATGTTCCACA+TGG | 0.664291 | tig0016540:-6111 | Msa1358800:CDS |
| TCTTCCGGTGACAATAACGA+TGG | 0.670887 | tig0016540:+7200 | None:intergenic |
| ATTTCTTGAGAAGACAAAGG+AGG | 0.675737 | tig0016540:+4675 | None:intergenic |
| CTGACAGCCATATGACGGGT+CGG | 0.676520 | tig0016540:+3543 | None:intergenic |
| GTGAGGTTCATAAACAAGGG+TGG | 0.679854 | tig0016540:+3751 | None:intergenic |
| GGTGGAGAAGATAGCGACGG+AGG | 0.680579 | tig0016540:+7505 | None:intergenic |
| GAGCACCGAACGATGAAGGG+AGG | 0.689052 | tig0016540:-7596 | Msa1358800:exon |
| GAAGGGAGAAATCCCAATGG+CGG | 0.691311 | tig0016540:+7363 | None:intergenic |
| AAATTATCAACCAGTTGACG+AGG | 0.695676 | tig0016540:-4056 | Msa1358800:CDS |
| GTCAGTAGACAACTCCACCA+TGG | 0.700569 | tig0016540:+3883 | None:intergenic |
| GGTGGTGGAGAAGATAGCGA+CGG | 0.700715 | tig0016540:+7502 | None:intergenic |
| ACCGGGGACGACGATGACGG+AGG | 0.701693 | tig0016540:+7433 | None:intergenic |
| AAGGGAGGAAACTTGTAAGG+CGG | 0.703168 | tig0016540:+7478 | None:intergenic |
| ATACTCCAAACAGACAGCTG+TGG | 0.705773 | tig0016540:+2334 | None:intergenic |
| GAATCTATGAAATACCGAAG+CGG | 0.706779 | tig0016540:+5518 | None:intergenic |
| TGAGAAGGGAGAAATCCCAA+TGG | 0.715811 | tig0016540:+7360 | None:intergenic |
| GTTGCAGGTAGTAGTGACCA+TGG | 0.717858 | tig0016540:-3900 | Msa1358800:intron |
| TGTTGTAGGAGAGACTCCAT+CGG | 0.719054 | tig0016540:-2841 | Msa1358800:intron |
| AGGTAACAATGTTTGAACCG+GGG | 0.733423 | tig0016540:+7417 | None:intergenic |
| GGTCGGATGAAACGTAATAG+CGG | 0.734607 | tig0016540:+3560 | None:intergenic |
| ATCAGAGTGCCAATGCCATG+TGG | 0.739934 | tig0016540:+6096 | None:intergenic |
| AATCCGTTGACACACCTGTG+AGG | 0.748408 | tig0016540:+3734 | None:intergenic |
| CAGCCACTAAACCAGAAGAG+CGG | 0.753592 | tig0016540:+4619 | None:intergenic |
| TGATGAGGAATGTAAGCCTG+GGG | 0.761336 | tig0016540:-6149 | Msa1358800:CDS |
| GCAGGTAGTAGTGACCATGG+TGG | 0.771993 | tig0016540:-3897 | Msa1358800:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAATTTTCTACTTAATT+AGG | - | tig0016540:2550-2569 | Msa1358800:intron | 10.0% |
| !!! | TATAAATTTTCTACTTAATT+AGG | - | tig0016540:2550-2569 | Msa1358800:intron | 10.0% |
| !!! | TTTCTTTTTGATTATTAATT+TGG | - | tig0016540:3326-3345 | Msa1358800:intron | 10.0% |
| !! | ATAAAAGAAAATTAATGAAA+AGG | + | tig0016540:3506-3525 | None:intergenic | 10.0% |
| !!! | CATTTAATATTTTATTTTGT+AGG | - | tig0016540:4406-4425 | Msa1358800:intron | 10.0% |
| !!! | AATAAAAGTATATAAAATGA+AGG | + | tig0016540:4624-4643 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTGTTTAAATCAT+AGG | - | tig0016540:6161-6180 | Msa1358800:CDS | 10.0% |
| !!! | AAAAACACTTTAAAATAAAA+AGG | - | tig0016540:6273-6292 | Msa1358800:CDS | 10.0% |
| !! | ATGAAATAAAGTAAAAAAAA+AGG | - | tig0016540:6562-6581 | Msa1358800:intron | 10.0% |
| !! | TTGTAATTAAAATTAAAAAC+AGG | - | tig0016540:6592-6611 | Msa1358800:intron | 10.0% |
| !!! | ATTTTTGTTATGAATATTGT+AGG | - | tig0016540:476-495 | Msa1358800:CDS | 15.0% |
| !! | TCTAAAAATTAAAATTCTTC+CGG | + | tig0016540:1476-1495 | None:intergenic | 15.0% |
| !!! | ATTTTAATTTTTAGAGGATT+TGG | - | tig0016540:1481-1500 | Msa1358800:intron | 15.0% |
| !!! | TTGTTTTTTATAATAATTCG+AGG | + | tig0016540:1695-1714 | None:intergenic | 15.0% |
| !! | ATTATAAAAAACAATTGAAC+TGG | - | tig0016540:1701-1720 | Msa1358800:intron | 15.0% |
| !! | ATAATTAATGAAATCCTAAT+TGG | + | tig0016540:1871-1890 | None:intergenic | 15.0% |
| !!! | ATAATGTTTTAAACTAATCA+AGG | - | tig0016540:2306-2325 | Msa1358800:CDS | 15.0% |
| !!! | TAATGTTTTAAACTAATCAA+GGG | - | tig0016540:2307-2326 | Msa1358800:CDS | 15.0% |
| !! | AGATCTTTAATATATGAATT+TGG | + | tig0016540:2357-2376 | None:intergenic | 15.0% |
| !! | AAGTAGAAAATTTATAATGA+TGG | + | tig0016540:2546-2565 | None:intergenic | 15.0% |
| !! | AAGTAGAAAATTTATAATGA+TGG | + | tig0016540:2546-2565 | None:intergenic | 15.0% |
| !! | AATATATCTACAAATATGTA+CGG | + | tig0016540:4057-4076 | None:intergenic | 15.0% |
| !!! | TCAAAAAAAGTATCTAAAAA+GGG | + | tig0016540:4225-4244 | None:intergenic | 15.0% |
| !!! | TTCAAAAAAAGTATCTAAAA+AGG | + | tig0016540:4226-4245 | None:intergenic | 15.0% |
| !! | ATTTAATGAATTTAGACATT+AGG | - | tig0016540:5942-5961 | Msa1358800:intron | 15.0% |
| !! | ATTAAATTAAAAGACAATTC+TGG | + | tig0016540:6759-6778 | None:intergenic | 15.0% |
| !! | TGAATGATTGTATAATGTTA+GGG | - | tig0016540:745-764 | Msa1358800:CDS | 20.0% |
| !!! | TGTTCATGTAAAATTGATTT+TGG | - | tig0016540:958-977 | Msa1358800:intron | 20.0% |
| !!! | AAAATTGATTTTGATATGCT+TGG | + | tig0016540:1107-1126 | None:intergenic | 20.0% |
| !! | ATAAATGTTGACAACTTAAT+AGG | + | tig0016540:1192-1211 | None:intergenic | 20.0% |
| !!! | GGAAGAATTTTAATTTTTAG+AGG | - | tig0016540:1475-1494 | Msa1358800:intron | 20.0% |
| !! | ATTATTCAAAACAGTTTGAA+TGG | + | tig0016540:1927-1946 | None:intergenic | 20.0% |
| !!! | AATAATTTTCTGCTCAATAA+AGG | + | tig0016540:2047-2066 | None:intergenic | 20.0% |
| !! | TTTATTGAGCAGAAAATTAT+TGG | - | tig0016540:2046-2065 | Msa1358800:CDS | 20.0% |
| !!! | AAGAAATTTTTACCAAGAAT+TGG | - | tig0016540:2159-2178 | Msa1358800:intron | 20.0% |
| !! | TATATTAAAGATCTCTTCTA+TGG | - | tig0016540:2363-2382 | Msa1358800:CDS | 20.0% |
| !! | ATTATGAATAGACCAAATAA+AGG | + | tig0016540:2425-2444 | None:intergenic | 20.0% |
| !! | TCTATTCATAATATTGTTTC+TGG | - | tig0016540:2433-2452 | Msa1358800:intron | 20.0% |
| !!! | CTATTCATAATATTGTTTCT+GGG | - | tig0016540:2434-2453 | Msa1358800:intron | 20.0% |
| !! | AGTGTGTCTTAAAATATATT+TGG | - | tig0016540:2467-2486 | Msa1358800:intron | 20.0% |
| !! | TAAAATTGTAAGACCAAATA+AGG | + | tig0016540:2695-2714 | None:intergenic | 20.0% |
| !! | ATAAAAACTGTTATGCTAAA+TGG | - | tig0016540:2861-2880 | Msa1358800:CDS | 20.0% |
| !!! | TTGATTATTAATTTGGTGTT+TGG | - | tig0016540:3333-3352 | Msa1358800:intron | 20.0% |
| !! | ATCATATTTAGAAGCAAAAT+GGG | + | tig0016540:3692-3711 | None:intergenic | 20.0% |
| !!! | TCTTATTTGTTTGAAATTCT+GGG | - | tig0016540:3897-3916 | Msa1358800:intron | 20.0% |
| !! | TTAAATGTAGCAATTAAAGT+AGG | + | tig0016540:4393-4412 | None:intergenic | 20.0% |
| !!! | TTTTCCTGTAATAAAAATGT+AGG | - | tig0016540:4556-4575 | Msa1358800:intron | 20.0% |
| !!! | TAATCCTACATTTTTATTAC+AGG | + | tig0016540:4563-4582 | None:intergenic | 20.0% |
| !! | TAATAAAAATGTAGGATTAG+CGG | - | tig0016540:4564-4583 | Msa1358800:CDS | 20.0% |
| !!! | CATTCTAAAAATATAACAGA+AGG | + | tig0016540:5190-5209 | None:intergenic | 20.0% |
| !! | AATAAAAAATTAGACCAACA+GGG | + | tig0016540:5277-5296 | None:intergenic | 20.0% |
| !! | ATTCTCATGAAATATAATTG+AGG | + | tig0016540:6201-6220 | None:intergenic | 20.0% |
| !! | TTCATACAAATCTTACAAAA+AGG | + | tig0016540:6498-6517 | None:intergenic | 20.0% |
| !!! | TCATTCTAATCAGATTATTT+TGG | - | tig0016540:6712-6731 | Msa1358800:intron | 20.0% |
| !! | ATAATAACAGAAAGAAAAAG+TGG | + | tig0016540:7128-7147 | None:intergenic | 20.0% |
| !!! | ACTTTTTCTTTCTGTTATTA+TGG | - | tig0016540:7127-7146 | Msa1358800:CDS | 20.0% |
| !!! | AATAACTAGCAAAATTCTTT+TGG | + | tig0016540:7691-7710 | None:intergenic | 20.0% |
| !!! | TATTTTGATGCATTTGAGAA+GGG | + | tig0016540:361-380 | None:intergenic | 25.0% |
| !!! | TTATTTTGATGCATTTGAGA+AGG | + | tig0016540:362-381 | None:intergenic | 25.0% |
| !! | TTTTCACTAATTTCTTCTTC+CGG | + | tig0016540:522-541 | None:intergenic | 25.0% |
| ! | TTCCATAATTACATTGAAAG+AGG | - | tig0016540:650-669 | Msa1358800:intron | 25.0% |
| ! | TACCTCTTTCAATGTAATTA+TGG | + | tig0016540:655-674 | None:intergenic | 25.0% |
| !!! | TTTAGGTTTTATTGTTGTTG+TGG | - | tig0016540:716-735 | Msa1358800:CDS | 25.0% |
| ! | GTGAATGATTGTATAATGTT+AGG | - | tig0016540:744-763 | Msa1358800:CDS | 25.0% |
| ! | ACACACTAATTCAAATTACT+TGG | + | tig0016540:802-821 | None:intergenic | 25.0% |
| ! | GTAATTTGAATTAGTGTGTT+TGG | - | tig0016540:803-822 | Msa1358800:CDS | 25.0% |
| !!! | AGATTGATTTTGGTTAAAAG+TGG | - | tig0016540:840-859 | Msa1358800:intron | 25.0% |
| ! | GACAGTTAATCTATTATGTT+TGG | - | tig0016540:987-1006 | Msa1358800:intron | 25.0% |
| !! | TCTAACTTACACTAGAATTT+TGG | + | tig0016540:1062-1081 | None:intergenic | 25.0% |
| ! | TTTGCAATTATTCTTCTGTT+TGG | - | tig0016540:1758-1777 | Msa1358800:intron | 25.0% |
| !! | ACTTTTCCAATTATCTTGTA+AGG | - | tig0016540:1788-1807 | Msa1358800:intron | 25.0% |
| ! | CAAAATCCTTACAAGATAAT+TGG | + | tig0016540:1797-1816 | None:intergenic | 25.0% |
| ! | TGTATATCTTAAACTCTTAG+CGG | - | tig0016540:1948-1967 | Msa1358800:CDS | 25.0% |
| ! | TGCTAAATGAATATAAGAGA+AGG | - | tig0016540:1997-2016 | Msa1358800:CDS | 25.0% |
| !! | TTGTGCCATCATTTTATAAT+AGG | - | tig0016540:2090-2109 | Msa1358800:intron | 25.0% |
| ! | TGGTAAAAATTTCTTCTTTC+CGG | + | tig0016540:2154-2173 | None:intergenic | 25.0% |
| ! | TCATATATTCGACTACATAA+AGG | + | tig0016540:2244-2263 | None:intergenic | 25.0% |
| !! | AATATATGATTGTTAGTCTG+TGG | - | tig0016540:2255-2274 | Msa1358800:intron | 25.0% |
| !! | ATATATGATTGTTAGTCTGT+GGG | - | tig0016540:2256-2275 | Msa1358800:intron | 25.0% |
| ! | CACTCTTCATATACAAAATA+TGG | + | tig0016540:2802-2821 | None:intergenic | 25.0% |
| ! | TTATATATTCTCAGCAAAGT+TGG | + | tig0016540:2845-2864 | None:intergenic | 25.0% |
| !! | ATAAGAAATGCATTTGTTGA+AGG | - | tig0016540:2974-2993 | Msa1358800:intron | 25.0% |
| ! | CATCATATTTAGAAGCAAAA+TGG | + | tig0016540:3693-3712 | None:intergenic | 25.0% |
| ! | CATTTATTCATCAAATAACG+TGG | - | tig0016540:3782-3801 | Msa1358800:CDS | 25.0% |
| !!! | GTCTTATTTGTTTGAAATTC+TGG | - | tig0016540:3896-3915 | Msa1358800:CDS | 25.0% |
| ! | ACACATTTCTGCTTATTAAT+AGG | - | tig0016540:4108-4127 | Msa1358800:intron | 25.0% |
| ! | CACATTTCTGCTTATTAATA+GGG | - | tig0016540:4109-4128 | Msa1358800:intron | 25.0% |
| !!! | GATACTTTTTTTGAATGCTT+AGG | - | tig0016540:4231-4250 | Msa1358800:intron | 25.0% |
| !!! | TACTTTTATTTACCGTCATT+TGG | - | tig0016540:4634-4653 | Msa1358800:CDS | 25.0% |
| !!! | CATTGCTTTATTTCTGTAAA+GGG | + | tig0016540:4748-4767 | None:intergenic | 25.0% |
| !!! | TCATTGCTTTATTTCTGTAA+AGG | + | tig0016540:4749-4768 | None:intergenic | 25.0% |
| ! | CAAAATAATCACACAAGTAA+TGG | + | tig0016540:5021-5040 | None:intergenic | 25.0% |
| !!! | TTACTTGTGTGATTATTTTG+TGG | - | tig0016540:5021-5040 | Msa1358800:intron | 25.0% |
| ! | AAACAATAAGAAAGAAAGCA+TGG | - | tig0016540:5146-5165 | Msa1358800:intron | 25.0% |
| ! | GAATAAAAAATTAGACCAAC+AGG | + | tig0016540:5278-5297 | None:intergenic | 25.0% |
| !! | TTTTTATTCTTTCAGCCAAT+TGG | - | tig0016540:5289-5308 | Msa1358800:intron | 25.0% |
| !! | TTTTATTCTTTCAGCCAATT+GGG | - | tig0016540:5290-5309 | Msa1358800:intron | 25.0% |
| ! | TCATATAGGATTCAAATAGA+AGG | - | tig0016540:5415-5434 | Msa1358800:intron | 25.0% |
| ! | GAAAAAATATCAACATGGTA+GGG | + | tig0016540:5499-5518 | None:intergenic | 25.0% |
| ! | TTATCAATAAAAAGACAGAG+AGG | + | tig0016540:5521-5540 | None:intergenic | 25.0% |
| ! | ATATGATAAATCTAATGCAC+AGG | + | tig0016540:5665-5684 | None:intergenic | 25.0% |
| !! | GCTTGTGTTATAAAGATTTT+TGG | + | tig0016540:6059-6078 | None:intergenic | 25.0% |
| ! | TCATGAAATATAATTGAGGT+CGG | + | tig0016540:6197-6216 | None:intergenic | 25.0% |
| !!! | GGTTTTAAGAAAATAACTGT+TGG | - | tig0016540:6294-6313 | Msa1358800:CDS | 25.0% |
| ! | TATGCATATATACCAAAACA+TGG | + | tig0016540:6669-6688 | None:intergenic | 25.0% |
| ! | TTAACCATGAATGAAATTTG+TGG | - | tig0016540:6810-6829 | Msa1358800:intron | 25.0% |
| ! | ACACTGCTTACATATTTAAA+TGG | - | tig0016540:6917-6936 | Msa1358800:intron | 25.0% |
| ! | CATAAATTCAGAACACAATT+TGG | + | tig0016540:7347-7366 | None:intergenic | 25.0% |
| !! | CAAATTGTGTTCTGAATTTA+TGG | - | tig0016540:7345-7364 | Msa1358800:CDS | 25.0% |
| ! | AAACAAATATCCTACAACAA+CGG | + | tig0016540:7427-7446 | None:intergenic | 25.0% |
| !! | TTGTAGGATATTTGTTTCTT+TGG | - | tig0016540:7430-7449 | Msa1358800:CDS | 25.0% |
| AATGAATTCGAGTGTATGTT+TGG | - | tig0016540:901-920 | Msa1358800:intron | 30.0% | |
| !!! | TACACCTCTAGAATCAATTT+TGG | - | tig0016540:1126-1145 | Msa1358800:intron | 30.0% |
| ! | TTAGCCAAAATTGATTCTAG+AGG | + | tig0016540:1133-1152 | None:intergenic | 30.0% |
| !!! | AATTTTGGCTAAGCAAAAAG+TGG | - | tig0016540:1141-1160 | Msa1358800:intron | 30.0% |
| AAAAACGCACACTTCATATA+TGG | - | tig0016540:1329-1348 | Msa1358800:intron | 30.0% | |
| TATATGGAAAGTTCCTAAAG+TGG | - | tig0016540:1345-1364 | Msa1358800:intron | 30.0% | |
| ! | AAAGGTTTTTGTATGATGCA+GGG | + | tig0016540:1401-1420 | None:intergenic | 30.0% |
| ! | AAAAGGTTTTTGTATGATGC+AGG | + | tig0016540:1402-1421 | None:intergenic | 30.0% |
| TTATAATAATTCGAGGCGTA+TGG | + | tig0016540:1688-1707 | None:intergenic | 30.0% | |
| CAACAATATTTGCTCCAATT+AGG | - | tig0016540:1854-1873 | Msa1358800:intron | 30.0% | |
| TGAATATAAGAGAAGGTTGA+TGG | - | tig0016540:2004-2023 | Msa1358800:CDS | 30.0% | |
| ! | TGCCATCATTTTATAATAGG+TGG | - | tig0016540:2093-2112 | Msa1358800:intron | 30.0% |
| ! | GCCATCATTTTATAATAGGT+GGG | - | tig0016540:2094-2113 | Msa1358800:intron | 30.0% |
| TCCCACCTATTATAAAATGA+TGG | + | tig0016540:2098-2117 | None:intergenic | 30.0% | |
| ! | TCATTTTATAATAGGTGGGA+AGG | - | tig0016540:2098-2117 | Msa1358800:intron | 30.0% |
| AGATAATGAGGTCTATATCA+GGG | - | tig0016540:2386-2405 | Msa1358800:CDS | 30.0% | |
| ! | TCAAGGTTAGTTCCTTTATT+TGG | - | tig0016540:2410-2429 | Msa1358800:intron | 30.0% |
| !! | CATAATATTGTTTCTGGGAT+CGG | - | tig0016540:2439-2458 | Msa1358800:intron | 30.0% |
| GTCACTCTTCATATCAAATA+CGG | + | tig0016540:2612-2631 | None:intergenic | 30.0% | |
| TAAGACCAAATAAGGATATG+TGG | + | tig0016540:2687-2706 | None:intergenic | 30.0% | |
| ! | CTTGCAAGATCATTTTCAAA+AGG | + | tig0016540:2894-2913 | None:intergenic | 30.0% |
| AAATGATCTTGCAAGAACAA+TGG | - | tig0016540:2899-2918 | Msa1358800:CDS | 30.0% | |
| AATGATCTTGCAAGAACAAT+GGG | - | tig0016540:2900-2919 | Msa1358800:CDS | 30.0% | |
| CATATTTCTTGAGAAGACAA+AGG | + | tig0016540:3035-3054 | None:intergenic | 30.0% | |
| GCTGTACAAACAGATAATTA+TGG | - | tig0016540:3104-3123 | Msa1358800:intron | 30.0% | |
| !! | TATTAATTTGGTGTTTGGTC+TGG | - | tig0016540:3338-3357 | Msa1358800:intron | 30.0% |
| ! | TTCCTTTAAAAACACTCCTT+GGG | - | tig0016540:3530-3549 | Msa1358800:CDS | 30.0% |
| GTTATCAAAGTTTAAAGGCA+AGG | + | tig0016540:3561-3580 | None:intergenic | 30.0% | |
| AGGCTGTTATCAAAGTTTAA+AGG | + | tig0016540:3566-3585 | None:intergenic | 30.0% | |
| !! | AAAATGTTGAAGTTTGTTGC+AGG | - | tig0016540:3609-3628 | Msa1358800:CDS | 30.0% |
| !! | TTGTTTGAAATTCTGGGATT+TGG | - | tig0016540:3903-3922 | Msa1358800:intron | 30.0% |
| CCACTTTCTAATATATCTGA+AGG | + | tig0016540:4083-4102 | None:intergenic | 30.0% | |
| CCTTCAGATATATTAGAAAG+TGG | - | tig0016540:4080-4099 | Msa1358800:intron | 30.0% | |
| ! | TGAATGCTTAGGAATTTTTC+TGG | - | tig0016540:4242-4261 | Msa1358800:intron | 30.0% |
| CCACAATGTAATAACAGTAT+CGG | + | tig0016540:4817-4836 | None:intergenic | 30.0% | |
| CGATACTGTTATTACATTGT+GGG | - | tig0016540:4815-4834 | Msa1358800:intron | 30.0% | |
| ! | TACATTAAAGCATCAAACAC+AGG | - | tig0016540:5116-5135 | Msa1358800:intron | 30.0% |
| !! | ATGCCTATAAATGTTGCTTT+GGG | - | tig0016540:5211-5230 | Msa1358800:intron | 30.0% |
| TATCTTCTTTCCGTATCTTA+TGG | - | tig0016540:5340-5359 | Msa1358800:CDS | 30.0% | |
| GGAAAAAATATCAACATGGT+AGG | + | tig0016540:5500-5519 | None:intergenic | 30.0% | |
| GAGAGGAAAAAATATCAACA+TGG | + | tig0016540:5504-5523 | None:intergenic | 30.0% | |
| TAACCTATGACTCATTGAAT+GGG | - | tig0016540:5592-5611 | Msa1358800:CDS | 30.0% | |
| ! | AAAACAACTTTCAAAAGCAC+TGG | + | tig0016540:5911-5930 | None:intergenic | 30.0% |
| ATTAACACAATAGTACACGT+TGG | + | tig0016540:5999-6018 | None:intergenic | 30.0% | |
| ! | TGTTAATTTCTGAGAAGCAT+GGG | - | tig0016540:6012-6031 | Msa1358800:intron | 30.0% |
| GAAACAAAGTGAATACAAGA+TGG | + | tig0016540:6476-6495 | None:intergenic | 30.0% | |
| !!! | TAATCAGATTATTTTGGAGC+TGG | - | tig0016540:6718-6737 | Msa1358800:intron | 30.0% |
| AACACCACAAATTTCATTCA+TGG | + | tig0016540:6817-6836 | None:intergenic | 30.0% | |
| !! | TTCCTTTTTAATTCAAACGC+GGG | + | tig0016540:7238-7257 | None:intergenic | 30.0% |
| !! | GTTCCTTTTTAATTCAAACG+CGG | + | tig0016540:7239-7258 | None:intergenic | 30.0% |
| ! | TTTTCTCTGGTGTATCAAAT+AGG | - | tig0016540:7272-7291 | Msa1358800:intron | 30.0% |
| TAGCATATGTAGAAAGAGTT+TGG | - | tig0016540:7596-7615 | Msa1358800:exon | 30.0% | |
| !! | CTAAAGATTTCAGCTTTAGA+TGG | - | tig0016540:7623-7642 | Msa1358800:five_prime_UTR | 30.0% |
| !!! | TAGCAAAATTCTTTTGGAGT+GGG | + | tig0016540:7685-7704 | None:intergenic | 30.0% |
| AAAGAGAAGAAGAAGAATGG+AGG | + | tig0016540:29-48 | None:intergenic | 35.0% | |
| GCAAAAGAGAAGAAGAAGAA+TGG | + | tig0016540:32-51 | None:intergenic | 35.0% | |
| CTGAAACTCTCTGAATTTCA+GGG | + | tig0016540:54-73 | None:intergenic | 35.0% | |
| ACTGAAACTCTCTGAATTTC+AGG | + | tig0016540:55-74 | None:intergenic | 35.0% | |
| TAGGTAACAATGTTTGAACC+GGG | + | tig0016540:291-310 | None:intergenic | 35.0% | |
| GTAGGTAACAATGTTTGAAC+CGG | + | tig0016540:292-311 | None:intergenic | 35.0% | |
| CAAACATTGTTACCTACTGT+TGG | - | tig0016540:295-314 | Msa1358800:three_prime_UTR | 35.0% | |
| ! | TGGAGAAAATGGGAAGTTTT+AGG | + | tig0016540:389-408 | None:intergenic | 35.0% |
| ! | AAAACTTCCCATTTTCTCCA+TGG | - | tig0016540:389-408 | Msa1358800:CDS | 35.0% |
| ATCTGTGCAGAACAAAGTTT+GGG | + | tig0016540:597-616 | None:intergenic | 35.0% | |
| AATCTGTGCAGAACAAAGTT+TGG | + | tig0016540:598-617 | None:intergenic | 35.0% | |
| AACTTTGTTCTGCACAGATT+AGG | - | tig0016540:598-617 | Msa1358800:intron | 35.0% | |
| !!! | AGGTTTTATTGTTGTTGTGG+AGG | - | tig0016540:719-738 | Msa1358800:CDS | 35.0% |
| !! | GCTGTGACAAAGATTGATTT+TGG | - | tig0016540:830-849 | Msa1358800:CDS | 35.0% |
| !! | ATTTGGTGCTAAGAACTTTC+AGG | - | tig0016540:1498-1517 | Msa1358800:intron | 35.0% |
| ! | CTTTTATCCTTCTCTTCAGA+TGG | - | tig0016540:1640-1659 | Msa1358800:intron | 35.0% |
| GATGGAGTCTATTTGTATTC+AGG | - | tig0016540:1658-1677 | Msa1358800:intron | 35.0% | |
| AACCAAGTCTTTCAAAAAGC+AGG | - | tig0016540:1972-1991 | Msa1358800:CDS | 35.0% | |
| !! | ATATAAGAGAAGGTTGATGG+TGG | - | tig0016540:2007-2026 | Msa1358800:CDS | 35.0% |
| TTTATAATAGGTGGGAAGGA+AGG | - | tig0016540:2102-2121 | Msa1358800:intron | 35.0% | |
| GAATCTATGAAATACCGAAG+CGG | + | tig0016540:2189-2208 | None:intergenic | 35.0% | |
| !! | TAAAGAGCTAGTTTGCTGTT+GGG | + | tig0016540:2287-2306 | None:intergenic | 35.0% |
| !! | ATAAAGAGCTAGTTTGCTGT+TGG | + | tig0016540:2288-2307 | None:intergenic | 35.0% |
| TCTCTTCTATGGAGATAATG+AGG | - | tig0016540:2374-2393 | Msa1358800:CDS | 35.0% | |
| GAGATAATGAGGTCTATATC+AGG | - | tig0016540:2385-2404 | Msa1358800:CDS | 35.0% | |
| TATTCTCAGCATGTTAGTTG+TGG | + | tig0016540:2649-2668 | None:intergenic | 35.0% | |
| GTATGCCACATATCCTTATT+TGG | - | tig0016540:2679-2698 | Msa1358800:intron | 35.0% | |
| ATTTCTTGAGAAGACAAAGG+AGG | + | tig0016540:3032-3051 | None:intergenic | 35.0% | |
| TAGCAAACAAGCTGTAGAAT+TGG | + | tig0016540:3133-3152 | None:intergenic | 35.0% | |
| !!! | CAAGGAGTGTTTTTAAAGGA+AGG | + | tig0016540:3531-3550 | None:intergenic | 35.0% |
| ! | CTTCCTTTAAAAACACTCCT+TGG | - | tig0016540:3529-3548 | Msa1358800:CDS | 35.0% |
| !!! | ATCCCAAGGAGTGTTTTTAA+AGG | + | tig0016540:3535-3554 | None:intergenic | 35.0% |
| AGCCTTCAAAATTGAACACA+TGG | - | tig0016540:3581-3600 | Msa1358800:CDS | 35.0% | |
| GCCTTCAAAATTGAACACAT+GGG | - | tig0016540:3582-3601 | Msa1358800:CDS | 35.0% | |
| ! | ACCCATGTGTTCAATTTTGA+AGG | + | tig0016540:3586-3605 | None:intergenic | 35.0% |
| AAATTATCAACCAGTTGACG+AGG | - | tig0016540:3648-3667 | Msa1358800:intron | 35.0% | |
| ! | GGTGGACATTGAAAATCTTT+TGG | + | tig0016540:3938-3957 | None:intergenic | 35.0% |
| ! | ATCTTATGGTGGAGATTTCA+AGG | - | tig0016540:4187-4206 | Msa1358800:intron | 35.0% |
| TTCTTGCTCTCTTTCAGATA+TGG | - | tig0016540:4279-4298 | Msa1358800:intron | 35.0% | |
| TCTTGCTCTCTTTCAGATAT+GGG | - | tig0016540:4280-4299 | Msa1358800:intron | 35.0% | |
| ! | AACTAAAATTCCGACTTGTC+TGG | + | tig0016540:4334-4353 | None:intergenic | 35.0% |
| !! | AGACAAGTCGGAATTTTAGT+TGG | - | tig0016540:4333-4352 | Msa1358800:intron | 35.0% |
| !!! | GAAGGCAAAGCTTTAAGTTT+TGG | + | tig0016540:4456-4475 | None:intergenic | 35.0% |
| ! | TAAAAATGTAGGATTAGCGG+TGG | - | tig0016540:4567-4586 | Msa1358800:CDS | 35.0% |
| TCTTACTGAAGATACACCAA+GGG | + | tig0016540:4661-4680 | None:intergenic | 35.0% | |
| ATCTTACTGAAGATACACCA+AGG | + | tig0016540:4662-4681 | None:intergenic | 35.0% | |
| CCGATACTGTTATTACATTG+TGG | - | tig0016540:4814-4833 | Msa1358800:intron | 35.0% | |
| AGAGTTCAAAAAATCACCGA+TGG | + | tig0016540:4882-4901 | None:intergenic | 35.0% | |
| TGGAGTCTTCATGAAGATTA+TGG | - | tig0016540:5041-5060 | Msa1358800:intron | 35.0% | |
| ATGAAGATTATGGCTGCTAT+TGG | - | tig0016540:5051-5070 | Msa1358800:intron | 35.0% | |
| GCAGCAATGCTTACATTTAT+TGG | - | tig0016540:5076-5095 | Msa1358800:intron | 35.0% | |
| ! | CATGCCTATAAATGTTGCTT+TGG | - | tig0016540:5210-5229 | Msa1358800:intron | 35.0% |
| GAACCCAAAGCAACATTTAT+AGG | + | tig0016540:5217-5236 | None:intergenic | 35.0% | |
| !! | TGCTTTGGGTTCTGTATTTT+AGG | - | tig0016540:5225-5244 | Msa1358800:intron | 35.0% |
| !! | GCTTTGGGTTCTGTATTTTA+GGG | - | tig0016540:5226-5245 | Msa1358800:intron | 35.0% |
| ATACGGGGAAATACAAAGAA+CGG | + | tig0016540:5560-5579 | None:intergenic | 35.0% | |
| TTACAAACAAGGACTATACG+GGG | + | tig0016540:5575-5594 | None:intergenic | 35.0% | |
| GTTACAAACAAGGACTATAC+GGG | + | tig0016540:5576-5595 | None:intergenic | 35.0% | |
| GGTTACAAACAAGGACTATA+CGG | + | tig0016540:5577-5596 | None:intergenic | 35.0% | |
| TGAGTCATAGGTTACAAACA+AGG | + | tig0016540:5586-5605 | None:intergenic | 35.0% | |
| GTAACCTATGACTCATTGAA+TGG | - | tig0016540:5591-5610 | Msa1358800:CDS | 35.0% | |
| AACCTATGACTCATTGAATG+GGG | - | tig0016540:5593-5612 | Msa1358800:CDS | 35.0% | |
| ! | AACAGACGTTCCTTTGATTT+GGG | + | tig0016540:5709-5728 | None:intergenic | 35.0% |
| AAACAGACGTTCCTTTGATT+TGG | + | tig0016540:5710-5729 | None:intergenic | 35.0% | |
| TCAAAGGAACGTCTGTTTAA+AGG | - | tig0016540:5712-5731 | Msa1358800:intron | 35.0% | |
| ! | GTGTTAATTTCTGAGAAGCA+TGG | - | tig0016540:6011-6030 | Msa1358800:intron | 35.0% |
| ATTGTCTGAGAGATAGAAAC+TGG | - | tig0016540:6383-6402 | Msa1358800:CDS | 35.0% | |
| TTGTCTGAGAGATAGAAACT+GGG | - | tig0016540:6384-6403 | Msa1358800:CDS | 35.0% | |
| CATGGTTAAAGAATCCATTC+CGG | + | tig0016540:6799-6818 | None:intergenic | 35.0% | |
| TTGTCTTACTCTCCTTATTC+AGG | - | tig0016540:6850-6869 | Msa1358800:intron | 35.0% | |
| !!! | GGGAGCATTGCTTTTATTAA+AGG | - | tig0016540:6881-6900 | Msa1358800:intron | 35.0% |
| TCTCTTTGATCCATATGACA+AGG | - | tig0016540:6955-6974 | Msa1358800:intron | 35.0% | |
| TGAGCTTAATATGACTATGC+AGG | - | tig0016540:6985-7004 | Msa1358800:intron | 35.0% | |
| TCCACAATTTCAGGACAATT+TGG | - | tig0016540:7187-7206 | Msa1358800:CDS | 35.0% | |
| TCCAAATTGTCCTGAAATTG+TGG | + | tig0016540:7191-7210 | None:intergenic | 35.0% | |
| ! | AAGACATCATCAGTTTTCTC+TGG | - | tig0016540:7259-7278 | Msa1358800:intron | 35.0% |
| CTTGGGAAACCATATTTAGT+GGG | - | tig0016540:7296-7315 | Msa1358800:intron | 35.0% | |
| ATGTGATGACCCACTAAATA+TGG | + | tig0016540:7308-7327 | None:intergenic | 35.0% | |
| ! | TTCAGAACACAATTTGGTGA+GGG | + | tig0016540:7341-7360 | None:intergenic | 35.0% |
| ! | ATTCAGAACACAATTTGGTG+AGG | + | tig0016540:7342-7361 | None:intergenic | 35.0% |
| TGAATTTATGGAGTCTCTGA+TGG | - | tig0016540:7357-7376 | Msa1358800:CDS | 35.0% | |
| AGAATGACATACTACATGCA+TGG | - | tig0016540:7399-7418 | Msa1358800:CDS | 35.0% | |
| !!! | AGCAAAATTCTTTTGGAGTG+GGG | + | tig0016540:7684-7703 | None:intergenic | 35.0% |
| !! | CTAGCAAAATTCTTTTGGAG+TGG | + | tig0016540:7686-7705 | None:intergenic | 35.0% |
| TTACAAGTTTCCTCCCTTGA+CGG | - | tig0016540:231-250 | Msa1358800:three_prime_UTR | 40.0% | |
| AGGTAACAATGTTTGAACCG+GGG | + | tig0016540:290-309 | None:intergenic | 40.0% | |
| !! | GAGAGTACCATGGAGAAAAT+GGG | + | tig0016540:399-418 | None:intergenic | 40.0% |
| !! | AGAGAGTACCATGGAGAAAA+TGG | + | tig0016540:400-419 | None:intergenic | 40.0% |
| GATACCATCGTTATTGTCAC+CGG | - | tig0016540:500-519 | Msa1358800:CDS | 40.0% | |
| GGTTAAAAGTGGTGTATGCT+TGG | - | tig0016540:851-870 | Msa1358800:intron | 40.0% | |
| !!! | CGAGTGTATGTTTGGTTTTG+CGG | - | tig0016540:909-928 | Msa1358800:intron | 40.0% |
| !!! | TTTGGTTTTGCGGTGACAAA+AGG | - | tig0016540:919-938 | Msa1358800:intron | 40.0% |
| ! | TGGGAAATTTCTGGGCATAA+AGG | - | tig0016540:1306-1325 | Msa1358800:intron | 40.0% |
| GCAGAATTAGAGTCCACTTT+AGG | + | tig0016540:1361-1380 | None:intergenic | 40.0% | |
| ATGGAATGCAAGAACGGAAA+AGG | + | tig0016540:1419-1438 | None:intergenic | 40.0% | |
| AGTTGGATGGAATGCAAGAA+CGG | + | tig0016540:1425-1444 | None:intergenic | 40.0% | |
| CAGAACATCAATGACTGATG+AGG | - | tig0016540:1540-1559 | Msa1358800:intron | 40.0% | |
| ATGCCATGTGGAACATGATT+CGG | + | tig0016540:1599-1618 | None:intergenic | 40.0% | |
| AATCATGTTCCACATGGCAT+TGG | - | tig0016540:1599-1618 | Msa1358800:intron | 40.0% | |
| ATAGACTCCATCTGAAGAGA+AGG | + | tig0016540:1650-1669 | None:intergenic | 40.0% | |
| TCCTGTGTCACATGTATTAG+AGG | - | tig0016540:1820-1839 | Msa1358800:intron | 40.0% | |
| TGTGTCACATGTATTAGAGG+CGG | - | tig0016540:1823-1842 | Msa1358800:intron | 40.0% | |
| !!! | CACCTGCTTTTTGAAAGACT+TGG | + | tig0016540:1977-1996 | None:intergenic | 40.0% |
| ! | ATTCTCAGCAAAGTTGGTTG+TGG | + | tig0016540:2839-2858 | None:intergenic | 40.0% |
| ! | TACAGCTTGTTTGCTAATCG+TGG | - | tig0016540:3137-3156 | Msa1358800:intron | 40.0% |
| TGCTAATCGTGGACTTTATG+AGG | - | tig0016540:3148-3167 | Msa1358800:intron | 40.0% | |
| TTGATGTTCAAAAGCCCACT+TGG | - | tig0016540:3178-3197 | Msa1358800:intron | 40.0% | |
| TGATGTTCAAAAGCCCACTT+GGG | - | tig0016540:3179-3198 | Msa1358800:intron | 40.0% | |
| ! | ATTCTCTCCGGTGTCAATTT+AGG | - | tig0016540:3263-3282 | Msa1358800:intron | 40.0% |
| TCATCAAATAACGTGGTTGC+AGG | - | tig0016540:3789-3808 | Msa1358800:CDS | 40.0% | |
| TTCAGGTAGCTTGACTTCTA+CGG | + | tig0016540:3863-3882 | None:intergenic | 40.0% | |
| AAGCTACCTGAAGAAGGAAT+AGG | - | tig0016540:3871-3890 | Msa1358800:CDS | 40.0% | |
| CCTGTGAGGTTCATAAACAA+GGG | + | tig0016540:3959-3978 | None:intergenic | 40.0% | |
| ACCTGTGAGGTTCATAAACA+AGG | + | tig0016540:3960-3979 | None:intergenic | 40.0% | |
| TCTTTCAGATATGGGTTTGC+AGG | - | tig0016540:4288-4307 | Msa1358800:intron | 40.0% | |
| CTTTCAGATATGGGTTTGCA+GGG | - | tig0016540:4289-4308 | Msa1358800:intron | 40.0% | |
| ACTTATATGACCCAACAGCA+TGG | + | tig0016540:4364-4383 | None:intergenic | 40.0% | |
| TGGTGAAACTTGCATACTGA+AGG | + | tig0016540:4474-4493 | None:intergenic | 40.0% | |
| ACTGTTGGGCTGTAATAAAG+TGG | - | tig0016540:4511-4530 | Msa1358800:intron | 40.0% | |
| CTTACTGAAGATACACCAAG+GGG | + | tig0016540:4660-4679 | None:intergenic | 40.0% | |
| CAATGAGCTCATTCTTGTCA+GGG | + | tig0016540:4842-4861 | None:intergenic | 40.0% | |
| ! | AATGAGCTCATTGCTGTTGT+AGG | - | tig0016540:4849-4868 | Msa1358800:intron | 40.0% |
| TGTTTGTGCGTTTCTTCACA+CGG | - | tig0016540:4925-4944 | Msa1358800:intron | 40.0% | |
| AAGATTATGGCTGCTATTGG+AGG | - | tig0016540:5054-5073 | Msa1358800:intron | 40.0% | |
| ATGAGGACAGGTACAACTTA+AGG | + | tig0016540:5254-5273 | None:intergenic | 40.0% | |
| AAATTAGACCAACAGGGATG+AGG | + | tig0016540:5271-5290 | None:intergenic | 40.0% | |
| TATTCTTTCAGCCAATTGGG+AGG | - | tig0016540:5293-5312 | Msa1358800:intron | 40.0% | |
| TGGTGCAGAACCATAAGATA+CGG | + | tig0016540:5353-5372 | None:intergenic | 40.0% | |
| TGTCAAAGTTAGCTGCATCT+TGG | - | tig0016540:5392-5411 | Msa1358800:intron | 40.0% | |
| TAGCTGCATCTTGGTCATAT+AGG | - | tig0016540:5401-5420 | Msa1358800:intron | 40.0% | |
| TACCCCATTCAATGAGTCAT+AGG | + | tig0016540:5598-5617 | None:intergenic | 40.0% | |
| TGCTCTCATTCCCAAATCAA+AGG | - | tig0016540:5696-5715 | Msa1358800:intron | 40.0% | |
| GAACGTCTGTTTAAAGGTGA+TGG | - | tig0016540:5718-5737 | Msa1358800:intron | 40.0% | |
| TTTCTGTGTTGCATCGTGTT+TGG | - | tig0016540:6080-6099 | Msa1358800:CDS | 40.0% | |
| TCTTTGTGTTGCATCGTGTT+TGG | - | tig0016540:6121-6140 | Msa1358800:CDS | 40.0% | |
| CATCGTGTTTGGTAAAGAGA+AGG | - | tig0016540:6132-6151 | Msa1358800:CDS | 40.0% | |
| ! | AGCTTGCACTTATTTCTTCG+CGG | + | tig0016540:6353-6372 | None:intergenic | 40.0% |
| TACCAAAACATGGACAAGAG+TGG | + | tig0016540:6659-6678 | None:intergenic | 40.0% | |
| !!! | ATTTTTAGCCAGTCTAGTGC+CGG | - | tig0016540:6777-6796 | Msa1358800:intron | 40.0% |
| ACTATGCAGGATGATCTTGT+TGG | - | tig0016540:6998-7017 | Msa1358800:intron | 40.0% | |
| CTATGCAGGATGATCTTGTT+GGG | - | tig0016540:6999-7018 | Msa1358800:intron | 40.0% | |
| CTTGTTGGGCTTGAAGAAAA+TGG | - | tig0016540:7013-7032 | Msa1358800:intron | 40.0% | |
| TTGGGCTTGAAGAAAATGGT+GGG | - | tig0016540:7017-7036 | Msa1358800:intron | 40.0% | |
| TTCCTCTTCTCCACAATTTC+AGG | - | tig0016540:7178-7197 | Msa1358800:CDS | 40.0% | |
| TGCCCGCGTTTGAATTAAAA+AGG | - | tig0016540:7233-7252 | Msa1358800:intron | 40.0% | |
| TGGTGTATCAAATAGGCCTT+GGG | - | tig0016540:7279-7298 | Msa1358800:intron | 40.0% | |
| CCACTAAATATGGTTTCCCA+AGG | + | tig0016540:7298-7317 | None:intergenic | 40.0% | |
| CCTTGGGAAACCATATTTAG+TGG | - | tig0016540:7295-7314 | Msa1358800:intron | 40.0% | |
| ! | TCAGAACACAATTTGGTGAG+GGG | + | tig0016540:7340-7359 | None:intergenic | 40.0% |
| AACAGAGCAGAAGATTCGTA+AGG | - | tig0016540:7472-7491 | Msa1358800:CDS | 40.0% | |
| AGCAGAAGATTCGTAAGGAT+TGG | - | tig0016540:7477-7496 | Msa1358800:CDS | 40.0% | |
| GCAGAAGATTCGTAAGGATT+GGG | - | tig0016540:7478-7497 | Msa1358800:CDS | 40.0% | |
| GGGTTTACACATGTCTCATA+GGG | + | tig0016540:7521-7540 | None:intergenic | 40.0% | |
| AGGGTTTACACATGTCTCAT+AGG | + | tig0016540:7522-7541 | None:intergenic | 40.0% | |
| CTTGATGGGAACTGTTTGTA+TGG | - | tig0016540:7572-7591 | Msa1358800:CDS | 40.0% | |
| !!! | AAAATTCTTTTGGAGTGGGG+GGG | + | tig0016540:7681-7700 | None:intergenic | 40.0% |
| !!! | CAAAATTCTTTTGGAGTGGG+GGG | + | tig0016540:7682-7701 | None:intergenic | 40.0% |
| !!! | GCAAAATTCTTTTGGAGTGG+GGG | + | tig0016540:7683-7702 | None:intergenic | 40.0% |
| ! | AAACGCAGCGTTTTGTAGCT+TGG | + | tig0016540:79-98 | None:intergenic | 45.0% |
| TTTGTCCTCCCTTCATCGTT+CGG | + | tig0016540:116-135 | None:intergenic | 45.0% | |
| AAGGGAGGAAACTTGTAAGG+CGG | + | tig0016540:229-248 | None:intergenic | 45.0% | |
| GTCAAGGGAGGAAACTTGTA+AGG | + | tig0016540:232-251 | None:intergenic | 45.0% | |
| TGAGAAGGGAGAAATCCCAA+TGG | + | tig0016540:347-366 | None:intergenic | 45.0% | |
| TCTTCCGGTGACAATAACGA+TGG | + | tig0016540:507-526 | None:intergenic | 45.0% | |
| CACAGGGACTAACGATCAAA+GGG | + | tig0016540:1288-1307 | None:intergenic | 45.0% | |
| CTTTGATCGTTAGTCCCTGT+GGG | - | tig0016540:1287-1306 | Msa1358800:intron | 45.0% | |
| TAGTCCCTGTGGGAAATTTC+TGG | - | tig0016540:1297-1316 | Msa1358800:intron | 45.0% | |
| AGTCCCTGTGGGAAATTTCT+GGG | - | tig0016540:1298-1317 | Msa1358800:intron | 45.0% | |
| ATGCCCAGAAATTTCCCACA+GGG | + | tig0016540:1304-1323 | None:intergenic | 45.0% | |
| TATGCCCAGAAATTTCCCAC+AGG | + | tig0016540:1305-1324 | None:intergenic | 45.0% | |
| TTGCATTCCATCCAACTGAG+AGG | - | tig0016540:1428-1447 | Msa1358800:intron | 45.0% | |
| ACTGATGAGGAATGTAAGCC+TGG | - | tig0016540:1553-1572 | Msa1358800:intron | 45.0% | |
| CTGATGAGGAATGTAAGCCT+GGG | - | tig0016540:1554-1573 | Msa1358800:intron | 45.0% | |
| TGATGAGGAATGTAAGCCTG+GGG | - | tig0016540:1555-1574 | Msa1358800:intron | 45.0% | |
| ! | TCATCATTTTGCCTTACCCC+AGG | + | tig0016540:1574-1593 | None:intergenic | 45.0% |
| ATGCCGAATCATGTTCCACA+TGG | - | tig0016540:1593-1612 | Msa1358800:intron | 45.0% | |
| AACTGGACAATGATTGTCCG+CGG | - | tig0016540:1718-1737 | Msa1358800:intron | 45.0% | |
| GCCTCTAATACATGTGACAC+AGG | + | tig0016540:1824-1843 | None:intergenic | 45.0% | |
| CAAGAATTGGATCTCCGCTT+CGG | - | tig0016540:2172-2191 | Msa1358800:intron | 45.0% | |
| TCCAGATCCTTCATTTGCCT+CGG | - | tig0016540:2209-2228 | Msa1358800:intron | 45.0% | |
| GAGGTCTATATCAGGGATCA+AGG | - | tig0016540:2393-2412 | Msa1358800:CDS | 45.0% | |
| CATGCAAACTTGCATCACGT+TGG | - | tig0016540:2573-2592 | Msa1358800:intron | 45.0% | |
| GGCTGGAAAAAAGGAATGTC+AGG | + | tig0016540:3011-3030 | None:intergenic | 45.0% | |
| GACAAAGGAGGCTGGAAAAA+AGG | + | tig0016540:3020-3039 | None:intergenic | 45.0% | |
| TAAACCAGAAGAGCGGTCAA+AGG | + | tig0016540:3081-3100 | None:intergenic | 45.0% | |
| ! | TCTCCGGTGTCAATTTAGGT+GGG | - | tig0016540:3267-3286 | Msa1358800:intron | 45.0% |
| TAGCCCACCTAAATTGACAC+CGG | + | tig0016540:3273-3292 | None:intergenic | 45.0% | |
| TAGGGTCTAGTCAGTGATTC+AGG | - | tig0016540:3389-3408 | Msa1358800:CDS | 45.0% | |
| AGGGTCTAGTCAGTGATTCA+GGG | - | tig0016540:3390-3409 | Msa1358800:CDS | 45.0% | |
| TAGTCAGTGATTCAGGGAAC+TGG | - | tig0016540:3396-3415 | Msa1358800:CDS | 45.0% | |
| GTGATTCAGGGAACTGGTTA+AGG | - | tig0016540:3402-3421 | Msa1358800:CDS | 45.0% | |
| TAAAGGCAAGGCAAATCCCA+AGG | + | tig0016540:3549-3568 | None:intergenic | 45.0% | |
| ! | ATGGTGGAGTTGTCTACTGA+CGG | - | tig0016540:3823-3842 | Msa1358800:CDS | 45.0% |
| TCTACTGACGGCTCTATGAT+GGG | - | tig0016540:3835-3854 | Msa1358800:CDS | 45.0% | |
| GAAGTCAAGCTACCTGAAGA+AGG | - | tig0016540:3865-3884 | Msa1358800:CDS | 45.0% | |
| CTACCTGAAGAAGGAATAGG+AGG | - | tig0016540:3874-3893 | Msa1358800:CDS | 45.0% | |
| AGACCTCCTATTCCTTCTTC+AGG | + | tig0016540:3880-3899 | None:intergenic | 45.0% | |
| GTGAGGTTCATAAACAAGGG+TGG | + | tig0016540:3956-3975 | None:intergenic | 45.0% | |
| ! | CCCTTGTTTATGAACCTCAC+AGG | - | tig0016540:3956-3975 | Msa1358800:intron | 45.0% |
| GGTCGGATGAAACGTAATAG+CGG | + | tig0016540:4147-4166 | None:intergenic | 45.0% | |
| AGCAGAAAGACCAGACAAGT+CGG | - | tig0016540:4321-4340 | Msa1358800:intron | 45.0% | |
| CAACAGTCAAGAGATGACTG+GGG | + | tig0016540:4498-4517 | None:intergenic | 45.0% | |
| CCAACAGTCAAGAGATGACT+GGG | + | tig0016540:4499-4518 | None:intergenic | 45.0% | |
| CCAGTCATCTCTTGACTGTT+GGG | - | tig0016540:4497-4516 | Msa1358800:intron | 45.0% | |
| GCAATGAGCTCATTCTTGTC+AGG | + | tig0016540:4843-4862 | None:intergenic | 45.0% | |
| TGTTGTAGGAGAGACTCCAT+CGG | - | tig0016540:4863-4882 | Msa1358800:intron | 45.0% | |
| GTTTGTGCGTTTCTTCACAC+GGG | - | tig0016540:4926-4945 | Msa1358800:intron | 45.0% | |
| TTTGTGCGTTTCTTCACACG+GGG | - | tig0016540:4927-4946 | Msa1358800:intron | 45.0% | |
| ACAAAGATGAGCCTCCCAAT+TGG | + | tig0016540:5307-5326 | None:intergenic | 45.0% | |
| ATTGGGAGGCTCATCTTTGT+TGG | - | tig0016540:5307-5326 | Msa1358800:intron | 45.0% | |
| ATACTCCAAACAGACAGCTG+TGG | + | tig0016540:5373-5392 | None:intergenic | 45.0% | |
| CAATACCTTCGTTACAGACC+AGG | + | tig0016540:5788-5807 | None:intergenic | 45.0% | |
| ! | ATTGAGTTGTGTGAGTCGCT+TGG | - | tig0016540:6219-6238 | Msa1358800:CDS | 45.0% |
| CAAAACATGGACAAGAGTGG+AGG | + | tig0016540:6656-6675 | None:intergenic | 45.0% | |
| ! | CTCCACTCTTGTCCATGTTT+TGG | - | tig0016540:6654-6673 | Msa1358800:intron | 45.0% |
| TACTCTCCTTATTCAGGCCA+AGG | - | tig0016540:6856-6875 | Msa1358800:intron | 45.0% | |
| ACTCTCCTTATTCAGGCCAA+GGG | - | tig0016540:6857-6876 | Msa1358800:intron | 45.0% | |
| TCACGTGCTTCCTTGTCATA+TGG | + | tig0016540:6968-6987 | None:intergenic | 45.0% | |
| GTTGGGCTTGAAGAAAATGG+TGG | - | tig0016540:7016-7035 | Msa1358800:intron | 45.0% | |
| GTCCTGAAATTGTGGAGAAG+AGG | + | tig0016540:7183-7202 | None:intergenic | 45.0% | |
| CTGGTGTATCAAATAGGCCT+TGG | - | tig0016540:7278-7297 | Msa1358800:intron | 45.0% | |
| TGGAGTCTCTGATGGAGAAA+AGG | - | tig0016540:7365-7384 | Msa1358800:CDS | 45.0% | |
| GATGGAGAAAAGGACATCGA+TGG | - | tig0016540:7375-7394 | Msa1358800:CDS | 45.0% | |
| ATGCATGGATCCGTTGTTGT+AGG | - | tig0016540:7414-7433 | Msa1358800:CDS | 45.0% | |
| AGGTTGGCATGACACTTGAT+GGG | - | tig0016540:7558-7577 | Msa1358800:CDS | 45.0% | |
| !!! | ATTCTTTTTTTTTTTTTTTT+AGG | - | tig0016540:699-718 | Msa1358800:CDS | 5.0% |
| !!! | ATTAATTTATAATTACTTTT+AGG | - | tig0016540:3370-3389 | Msa1358800:CDS | 5.0% |
| !!! | TTAATTTATAATTACTTTTA+GGG | - | tig0016540:3371-3390 | Msa1358800:CDS | 5.0% |
| !! | TAATATTTAATAGAAAAAAA+TGG | + | tig0016540:5824-5843 | None:intergenic | 5.0% |
| TTCAGTGGTACTACCTCCCT+TGG | - | tig0016540:1-20 | Msa1358800:three_prime_UTR | 50.0% | |
| !! | AAGAAGAATGGAGGCGCCAA+GGG | + | tig0016540:20-39 | None:intergenic | 50.0% |
| !! | ACTGAGCACCGAACGATGAA+GGG | - | tig0016540:105-124 | Msa1358800:three_prime_UTR | 50.0% |
| CCTCCATCTTTCTCCAACTC+CGG | - | tig0016540:150-169 | Msa1358800:three_prime_UTR | 50.0% | |
| !! | AGTATCGGTGTGACCGTCAA+GGG | + | tig0016540:247-266 | None:intergenic | 50.0% |
| !! | GATGACGGAGGTGACAGTAT+CGG | + | tig0016540:262-281 | None:intergenic | 50.0% |
| GAAGGGAGAAATCCCAATGG+CGG | + | tig0016540:344-363 | None:intergenic | 50.0% | |
| !! | GAGAGAGAGAGAGAGTACCA+TGG | + | tig0016540:409-428 | None:intergenic | 50.0% |
| GGACTAACGATCAAAGGGTG+AGG | + | tig0016540:1283-1302 | None:intergenic | 50.0% | |
| CCACAGGGACTAACGATCAA+AGG | + | tig0016540:1289-1308 | None:intergenic | 50.0% | |
| CCTTTGATCGTTAGTCCCTG+TGG | - | tig0016540:1286-1305 | Msa1358800:intron | 50.0% | |
| CCACAATCCTCTCAGTTGGA+TGG | + | tig0016540:1438-1457 | None:intergenic | 50.0% | |
| CCATCCAACTGAGAGGATTG+TGG | - | tig0016540:1435-1454 | Msa1358800:intron | 50.0% | |
| AGGAATGTAAGCCTGGGGTA+AGG | - | tig0016540:1560-1579 | Msa1358800:intron | 50.0% | |
| ! | ATCAGAGTGCCAATGCCATG+TGG | + | tig0016540:1611-1630 | None:intergenic | 50.0% |
| !! | ACAGCTTAGTTCTAGCTCCG+CGG | + | tig0016540:1738-1757 | None:intergenic | 50.0% |
| AGGAAGGAGTTCTCGTGCTT+TGG | - | tig0016540:2118-2137 | Msa1358800:intron | 50.0% | |
| CGAAGCGGAGATCCAATTCT+TGG | + | tig0016540:2174-2193 | None:intergenic | 50.0% | |
| ACCGAGGCAAATGAAGGATC+TGG | + | tig0016540:2213-2232 | None:intergenic | 50.0% | |
| ACTCTCACCGAGGCAAATGA+AGG | + | tig0016540:2219-2238 | None:intergenic | 50.0% | |
| CATAAAGGCAACTCTCACCG+AGG | + | tig0016540:2229-2248 | None:intergenic | 50.0% | |
| CTTGAGAAGACAAAGGAGGC+TGG | + | tig0016540:3028-3047 | None:intergenic | 50.0% | |
| !! | TGACCGCTCTTCTGGTTTAG+TGG | - | tig0016540:3082-3101 | Msa1358800:intron | 50.0% |
| CAGCCACTAAACCAGAAGAG+CGG | + | tig0016540:3088-3107 | None:intergenic | 50.0% | |
| GTTCAAAAGCCCACTTGGGT+TGG | - | tig0016540:3183-3202 | Msa1358800:intron | 50.0% | |
| !! | GTGGTATTGGCTTGGGTCTT+GGG | - | tig0016540:3210-3229 | Msa1358800:intron | 50.0% |
| GAATCGAACCTGAGACCTTG+CGG | + | tig0016540:3247-3266 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | - | tig0016540:3251-3270 | Msa1358800:intron | 50.0% | |
| ! | CTCTCCGGTGTCAATTTAGG+TGG | - | tig0016540:3266-3285 | Msa1358800:intron | 50.0% |
| TCAACCAGTTGACGAGGTCA+CGG | - | tig0016540:3654-3673 | Msa1358800:intron | 50.0% | |
| GTTGCAGGTAGTAGTGACCA+TGG | - | tig0016540:3804-3823 | Msa1358800:CDS | 50.0% | |
| GTCAGTAGACAACTCCACCA+TGG | + | tig0016540:3824-3843 | None:intergenic | 50.0% | |
| GTCTACTGACGGCTCTATGA+TGG | - | tig0016540:3834-3853 | Msa1358800:CDS | 50.0% | |
| GAACCTCACAGGTGTGTCAA+CGG | - | tig0016540:3967-3986 | Msa1358800:intron | 50.0% | |
| AATCCGTTGACACACCTGTG+AGG | + | tig0016540:3973-3992 | None:intergenic | 50.0% | |
| GTTTCATCCGACCCGTCATA+TGG | - | tig0016540:4154-4173 | Msa1358800:intron | 50.0% | |
| ! | ATGCGCTGACAGCCATATGA+CGG | + | tig0016540:4169-4188 | None:intergenic | 50.0% |
| ATGGCTGTCAGCGCATCTTA+TGG | - | tig0016540:4173-4192 | Msa1358800:intron | 50.0% | |
| AGTTGGATGTGCCATGCTGT+TGG | - | tig0016540:4350-4369 | Msa1358800:intron | 50.0% | |
| GTTGGATGTGCCATGCTGTT+GGG | - | tig0016540:4351-4370 | Msa1358800:intron | 50.0% | |
| CCCAGTCATCTCTTGACTGT+TGG | - | tig0016540:4496-4515 | Msa1358800:intron | 50.0% | |
| CCCAACAGTCAAGAGATGAC+TGG | + | tig0016540:4500-4519 | None:intergenic | 50.0% | |
| TTTACCGTCATTTGGCCCCT+TGG | - | tig0016540:4642-4661 | Msa1358800:CDS | 50.0% | |
| TACACCAAGGGGCCAAATGA+CGG | + | tig0016540:4649-4668 | None:intergenic | 50.0% | |
| !!! | GCTGCTGCTTTTTCAGCTGA+TGG | - | tig0016540:4771-4790 | Msa1358800:intron | 50.0% |
| ! | AGCTGATGGTTCTGTGCTTG+CGG | - | tig0016540:4785-4804 | Msa1358800:intron | 50.0% |
| ATGCACAGGAAACAGCTGCA+TGG | + | tig0016540:5651-5670 | None:intergenic | 50.0% | |
| CGCAACAGATCCTATTCCAG+TGG | - | tig0016540:5759-5778 | Msa1358800:intron | 50.0% | |
| ATCCTATTCCAGTGGCTTCC+TGG | - | tig0016540:5767-5786 | Msa1358800:intron | 50.0% | |
| TGGGCACATTACTTGACACG+AGG | - | tig0016540:6031-6050 | Msa1358800:intron | 50.0% | |
| AATCCATTCCGGCACTAGAC+TGG | + | tig0016540:6788-6807 | None:intergenic | 50.0% | |
| TCCTTATTCAGGCCAAGGGA+GGG | - | tig0016540:6861-6880 | Msa1358800:intron | 50.0% | |
| AAAAGCAATGCTCCCTCCCT+TGG | + | tig0016540:6876-6895 | None:intergenic | 50.0% | |
| AATTCAAACGCGGGCAACTC+TGG | + | tig0016540:7229-7248 | None:intergenic | 50.0% | |
| ! | GAACACAATTTGGTGAGGGG+TGG | + | tig0016540:7337-7356 | None:intergenic | 50.0% |
| ! | CAGGTTGGCATGACACTTGA+TGG | - | tig0016540:7557-7576 | Msa1358800:CDS | 50.0% |
| !! | GAAGAAGAATGGAGGCGCCA+AGG | + | tig0016540:21-40 | None:intergenic | 55.0% |
| !! | CACTGAGCACCGAACGATGA+AGG | - | tig0016540:104-123 | Msa1358800:three_prime_UTR | 55.0% |
| CCGGAGTTGGAGAAAGATGG+AGG | + | tig0016540:153-172 | None:intergenic | 55.0% | |
| TCGCCGGAGTTGGAGAAAGA+TGG | + | tig0016540:156-175 | None:intergenic | 55.0% | |
| !! | GGTGGTGGAGAAGATAGCGA+CGG | + | tig0016540:205-224 | None:intergenic | 55.0% |
| ! | AACTTGTAAGGCGGTGGTGG+TGG | + | tig0016540:220-239 | None:intergenic | 55.0% |
| GGAAACTTGTAAGGCGGTGG+TGG | + | tig0016540:223-242 | None:intergenic | 55.0% | |
| GGAGGAAACTTGTAAGGCGG+TGG | + | tig0016540:226-245 | None:intergenic | 55.0% | |
| !! | CAGTATCGGTGTGACCGTCA+AGG | + | tig0016540:248-267 | None:intergenic | 55.0% |
| GAGGGAAGAGGTCCAACAGT+AGG | + | tig0016540:310-329 | None:intergenic | 55.0% | |
| TGTTGGACCTCTTCCCTCGA+CGG | - | tig0016540:312-331 | Msa1358800:exon | 55.0% | |
| ! | GGAGAAATCCCAATGGCGGA+TGG | + | tig0016540:340-359 | None:intergenic | 55.0% |
| GCAGCCACAATCCTCTCAGT+TGG | + | tig0016540:1442-1461 | None:intergenic | 55.0% | |
| ACTGAGAGGATTGTGGCTGC+AGG | - | tig0016540:1442-1461 | Msa1358800:intron | 55.0% | |
| GTGCTTTGGCAGCTAGACAC+CGG | - | tig0016540:2132-2151 | Msa1358800:intron | 55.0% | |
| AAGAGCGGTCAAAGGCTGCT+TGG | + | tig0016540:3073-3092 | None:intergenic | 55.0% | |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | - | tig0016540:3197-3216 | Msa1358800:intron | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | - | tig0016540:3202-3221 | Msa1358800:intron | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | - | tig0016540:3203-3222 | Msa1358800:intron | 55.0% |
| AGACCCAAGCCAATACCACC+AGG | + | tig0016540:3209-3228 | None:intergenic | 55.0% | |
| !! | GGTGGTATTGGCTTGGGTCT+TGG | - | tig0016540:3209-3228 | Msa1358800:intron | 55.0% |
| CATACCGTGACCTCGTCAAC+TGG | + | tig0016540:3661-3680 | None:intergenic | 55.0% | |
| GCAGGTAGTAGTGACCATGG+TGG | - | tig0016540:3807-3826 | Msa1358800:CDS | 55.0% | |
| !! | CTGACAGCCATATGACGGGT+CGG | + | tig0016540:4164-4183 | None:intergenic | 55.0% |
| ! | TGCGCTGACAGCCATATGAC+GGG | + | tig0016540:4168-4187 | None:intergenic | 55.0% |
| GCTGTCAGCGCATCTTATGG+TGG | - | tig0016540:4176-4195 | Msa1358800:intron | 55.0% | |
| AGTCAAGAGATGACTGGGGC+TGG | + | tig0016540:4494-4513 | None:intergenic | 55.0% | |
| GTACCTGTCCTCATCCCTGT+TGG | - | tig0016540:5260-5279 | Msa1358800:intron | 55.0% | |
| AGACCAACAGGGATGAGGAC+AGG | + | tig0016540:5266-5285 | None:intergenic | 55.0% | |
| CTGCACCACAGCTGTCTGTT+TGG | - | tig0016540:5365-5384 | Msa1358800:CDS | 55.0% | |
| GACCAGGAAGCCACTGGAAT+AGG | + | tig0016540:5772-5791 | None:intergenic | 55.0% | |
| GTTACAGACCAGGAAGCCAC+TGG | + | tig0016540:5778-5797 | None:intergenic | 55.0% | |
| GGCTTCCTGGTCTGTAACGA+AGG | - | tig0016540:5780-5799 | Msa1358800:intron | 55.0% | |
| ! | TAGCCAGTCTAGTGCCGGAA+TGG | - | tig0016540:6782-6801 | Msa1358800:intron | 55.0% |
| CTCCTTATTCAGGCCAAGGG+AGG | - | tig0016540:6860-6879 | Msa1358800:intron | 55.0% | |
| TCCCTCCCTTGGCCTGAATA+AGG | + | tig0016540:6865-6884 | None:intergenic | 55.0% | |
| ! | CCTGCAGCAGCTAGTTGGTA+GGG | + | tig0016540:7541-7560 | None:intergenic | 55.0% |
| ACCTGCAGCAGCTAGTTGGT+AGG | + | tig0016540:7542-7561 | None:intergenic | 55.0% | |
| ACCAACTAGCTGCTGCAGGT+TGG | - | tig0016540:7542-7561 | Msa1358800:CDS | 55.0% | |
| GACTGCCTAGTGTACCAGAG+AGG | - | tig0016540:7654-7673 | Msa1358800:five_prime_UTR | 55.0% | |
| !! | AAGAATGGAGGCGCCAAGGG+AGG | + | tig0016540:17-36 | None:intergenic | 60.0% |
| !! | GAGCACCGAACGATGAAGGG+AGG | - | tig0016540:108-127 | Msa1358800:three_prime_UTR | 60.0% |
| TAGAAGACGGTCGCCGGAGT+TGG | + | tig0016540:166-185 | None:intergenic | 60.0% | |
| TCCGGCGACCGTCTTCTAGT+CGG | - | tig0016540:168-187 | Msa1358800:three_prime_UTR | 60.0% | |
| ! | GACCGTCTTCTAGTCGGCTC+CGG | - | tig0016540:174-193 | Msa1358800:three_prime_UTR | 60.0% |
| TGCCGGAGCCGACTAGAAGA+CGG | + | tig0016540:179-198 | None:intergenic | 60.0% | |
| ! | GAAGATAGCGACGGAGGTGC+CGG | + | tig0016540:196-215 | None:intergenic | 60.0% |
| GGTGGAGAAGATAGCGACGG+AGG | + | tig0016540:202-221 | None:intergenic | 60.0% | |
| ATCGGTGTGACCGTCAAGGG+AGG | + | tig0016540:244-263 | None:intergenic | 60.0% | |
| TGAACCGGGGACGACGATGA+CGG | + | tig0016540:277-296 | None:intergenic | 60.0% | |
| GTGGCTGCAGGCGATGTAAC+CGG | - | tig0016540:1454-1473 | Msa1358800:intron | 60.0% | |
| GCAGCCTTTGACCGCTCTTC+TGG | - | tig0016540:3074-3093 | Msa1358800:intron | 60.0% | |
| !! | AAAGCCCACTTGGGTTGGCC+TGG | - | tig0016540:3188-3207 | Msa1358800:intron | 60.0% |
| ACCACCAGGCCAACCCAAGT+GGG | + | tig0016540:3195-3214 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | + | tig0016540:3196-3215 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTTGCGG+AGG | + | tig0016540:3244-3263 | None:intergenic | 60.0% | |
| CCCTACCAACTAGCTGCTGC+AGG | - | tig0016540:7538-7557 | Msa1358800:CDS | 60.0% | |
| GCCAACCTGCAGCAGCTAGT+TGG | + | tig0016540:7546-7565 | None:intergenic | 60.0% | |
| GGGGACCTCTCTGGTACACT+AGG | + | tig0016540:7662-7681 | None:intergenic | 60.0% | |
| GCCGACTAGAAGACGGTCGC+CGG | + | tig0016540:172-191 | None:intergenic | 65.0% | |
| ACCTCCGTCATCGTCGTCCC+CGG | - | tig0016540:270-289 | Msa1358800:three_prime_UTR | 65.0% | |
| !! | GATGGTGCCGTCGAGGGAAG+AGG | + | tig0016540:322-341 | None:intergenic | 65.0% |
| !! | ATGGCGGATGGTGCCGTCGA+GGG | + | tig0016540:328-347 | None:intergenic | 65.0% |
| !! | AATGGCGGATGGTGCCGTCG+AGG | + | tig0016540:329-348 | None:intergenic | 65.0% |
| TCGACGGCACCATCCGCCAT+TGG | - | tig0016540:328-347 | Msa1358800:CDS | 65.0% | |
| CGACGGCACCATCCGCCATT+GGG | - | tig0016540:329-348 | Msa1358800:CDS | 65.0% | |
| ! | TGGGAGTGTGCTCCTCCGCA+AGG | - | tig0016540:3229-3248 | Msa1358800:intron | 65.0% |
| GTGCTCCTCCGCAAGGTCTC+AGG | - | tig0016540:3236-3255 | Msa1358800:intron | 65.0% | |
| ! | ACCGGGGACGACGATGACGG+AGG | + | tig0016540:274-293 | None:intergenic | 70.0% |
| !! | GCCCACTTGGGTTGGCCTGG+TGG | - | tig0016540:3191-3210 | Msa1358800:intron | 70.0% |
| TGGAGTGGGGGGGACCTCTC+TGG | + | tig0016540:7671-7690 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016540 | gene | 1 | 7725 | 1 | ID=Msa1358800;Name=Msa1358800 |
| tig0016540 | mRNA | 1 | 7725 | 1 | ID=Msa1358800-mRNA-1;Parent=Msa1358800;Name=Msa1358800-mRNA-1;_AED=0.19;_eAED=0.19;_QI=119|0.85|0.86|1|1|1|15|320|811 |
| tig0016540 | exon | 1 | 526 | 1 | ID=Msa1358800-mRNA-1:exon:11080;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 692 | 854 | 692 | ID=Msa1358800-mRNA-1:exon:11079;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 1925 | 2070 | 1925 | ID=Msa1358800-mRNA-1:exon:11078;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 2290 | 2422 | 2290 | ID=Msa1358800-mRNA-1:exon:11077;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 2842 | 2971 | 2842 | ID=Msa1358800-mRNA-1:exon:11076;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 3345 | 3430 | 3345 | ID=Msa1358800-mRNA-1:exon:11075;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 3518 | 3656 | 3518 | ID=Msa1358800-mRNA-1:exon:11074;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 3749 | 3915 | 3749 | ID=Msa1358800-mRNA-1:exon:11073;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 4051 | 4095 | 4051 | ID=Msa1358800-mRNA-1:exon:11072;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 4557 | 4697 | 4557 | ID=Msa1358800-mRNA-1:exon:11071;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 5312 | 5398 | 5312 | ID=Msa1358800-mRNA-1:exon:11070;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 5496 | 5614 | 5496 | ID=Msa1358800-mRNA-1:exon:11069;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 6047 | 6455 | 6047 | ID=Msa1358800-mRNA-1:exon:11068;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 7055 | 7228 | 7055 | ID=Msa1358800-mRNA-1:exon:11067;Parent=Msa1358800-mRNA-1 |
| tig0016540 | exon | 7316 | 7725 | 7316 | ID=Msa1358800-mRNA-1:exon:11066;Parent=Msa1358800-mRNA-1 |
| tig0016540 | five_prime_UTR | 7607 | 7725 | 7607 | ID=Msa1358800-mRNA-1:five_prime_utr;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 7316 | 7606 | 7316 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 7055 | 7228 | 7055 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 6047 | 6455 | 6047 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 5496 | 5614 | 5496 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 5312 | 5398 | 5312 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 4557 | 4697 | 4557 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 4051 | 4095 | 4051 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 3749 | 3915 | 3749 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 3518 | 3656 | 3518 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 3345 | 3430 | 3345 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 2842 | 2971 | 2842 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 2290 | 2422 | 2290 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 1925 | 2070 | 1925 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 692 | 854 | 692 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | CDS | 321 | 526 | 321 | ID=Msa1358800-mRNA-1:cds;Parent=Msa1358800-mRNA-1 |
| tig0016540 | three_prime_UTR | 1 | 320 | 1 | ID=Msa1358800-mRNA-1:three_prime_utr;Parent=Msa1358800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
