Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358980 | XP_024633021.1 | 98.357 | 487 | 8 | 0 | 1 | 487 | 1 | 487 | 0.0 | 966 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358980 | sp|Q9M8L9|AVT6E_ARATH | 71.779 | 489 | 129 | 3 | 6 | 487 | 2 | 488 | 0.0 | 677 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358980 | G7IIA0 | 98.357 | 487 | 8 | 0 | 1 | 487 | 1 | 487 | 0.0 | 966 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1358980 | Msa1459910 | 0.816020 | 6.858328e-52 | -8.615850e-47 |
| Msa0826510 | Msa1358980 | 0.814260 | 1.686415e-51 | -8.615850e-47 |
| Msa0865620 | Msa1358980 | 0.813245 | 2.821763e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358980 | MtrunA17_Chr2g0333321 | 98.357 | 487 | 8 | 0 | 1 | 487 | 1 | 487 | 0.0 | 966 |
| Msa1358980 | MtrunA17_Chr8g0366021 | 45.631 | 412 | 217 | 3 | 79 | 486 | 51 | 459 | 2.07e-119 | 358 |
| Msa1358980 | MtrunA17_Chr7g0220531 | 45.433 | 416 | 218 | 4 | 73 | 483 | 47 | 458 | 4.91e-118 | 354 |
| Msa1358980 | MtrunA17_Chr6g0455911 | 44.762 | 420 | 224 | 4 | 73 | 487 | 38 | 454 | 1.11e-112 | 340 |
| Msa1358980 | MtrunA17_Chr6g0455951 | 44.787 | 422 | 222 | 6 | 73 | 487 | 43 | 460 | 4.69e-108 | 328 |
| Msa1358980 | MtrunA17_Chr6g0455981 | 43.961 | 414 | 224 | 4 | 79 | 487 | 46 | 456 | 6.86e-107 | 325 |
| Msa1358980 | MtrunA17_Chr5g0437961 | 40.749 | 427 | 245 | 5 | 62 | 483 | 5 | 428 | 5.39e-106 | 322 |
| Msa1358980 | MtrunA17_Chr3g0114351 | 39.070 | 430 | 253 | 5 | 64 | 487 | 12 | 438 | 5.36e-103 | 315 |
| Msa1358980 | MtrunA17_Chr6g0455941 | 43.095 | 420 | 231 | 4 | 73 | 487 | 45 | 461 | 8.00e-103 | 315 |
| Msa1358980 | MtrunA17_Chr5g0437951 | 38.679 | 424 | 247 | 7 | 69 | 485 | 28 | 445 | 1.53e-95 | 296 |
| Msa1358980 | MtrunA17_Chr8g0366001 | 43.985 | 266 | 146 | 2 | 221 | 486 | 4 | 266 | 1.15e-69 | 223 |
| Msa1358980 | MtrunA17_Chr6g0459871 | 43.333 | 270 | 147 | 4 | 221 | 487 | 50 | 316 | 1.18e-60 | 201 |
| Msa1358980 | MtrunA17_Chr8g0365971 | 40.741 | 189 | 108 | 1 | 47 | 231 | 23 | 211 | 1.47e-38 | 140 |
| Msa1358980 | MtrunA17_Chr8g0365991 | 40.719 | 167 | 97 | 1 | 51 | 217 | 23 | 187 | 8.33e-32 | 120 |
| Msa1358980 | MtrunA17_Chr3g0114341 | 40.217 | 92 | 54 | 1 | 71 | 162 | 19 | 109 | 4.85e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358980 | AT1G80510.1 | 71.779 | 489 | 129 | 3 | 6 | 487 | 2 | 488 | 0.0 | 677 |
| Msa1358980 | AT3G30390.1 | 45.107 | 419 | 223 | 3 | 73 | 487 | 41 | 456 | 5.53e-123 | 367 |
| Msa1358980 | AT3G30390.3 | 45.107 | 419 | 223 | 3 | 73 | 487 | 41 | 456 | 5.53e-123 | 367 |
| Msa1358980 | AT3G30390.2 | 45.107 | 419 | 223 | 3 | 73 | 487 | 41 | 456 | 5.53e-123 | 367 |
| Msa1358980 | AT5G38820.1 | 45.238 | 420 | 221 | 4 | 73 | 486 | 33 | 449 | 5.24e-121 | 362 |
| Msa1358980 | AT5G38820.3 | 45.238 | 420 | 221 | 4 | 73 | 486 | 33 | 449 | 5.24e-121 | 362 |
| Msa1358980 | AT5G38820.2 | 45.238 | 420 | 221 | 4 | 73 | 486 | 38 | 454 | 5.88e-121 | 362 |
| Msa1358980 | AT3G56200.1 | 39.618 | 419 | 246 | 3 | 72 | 486 | 20 | 435 | 4.44e-100 | 308 |
| Msa1358980 | AT2G40420.1 | 38.186 | 419 | 250 | 5 | 72 | 485 | 22 | 436 | 6.12e-89 | 279 |
Find 104 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCGGTTCGGTTCATCATTT+AGG | 0.170468 | tig0016604:-29004 | Msa1358980:CDS |
| AATTGTTTATTTGATTATAA+TGG | 0.179616 | tig0016604:-29038 | Msa1358980:CDS |
| ATTTGACTACTACTATTATT+GGG | 0.217290 | tig0016604:-29288 | Msa1358980:CDS |
| AATTTGACTACTACTATTAT+TGG | 0.222548 | tig0016604:-29289 | Msa1358980:CDS |
| AGTTGATGGGGAATGGGGTT+TGG | 0.254515 | tig0016604:-28970 | Msa1358980:CDS |
| TATTATTGGGGCAGGAATTA+TGG | 0.256792 | tig0016604:-29275 | Msa1358980:CDS |
| CCGGTTCGGTTCATCATTTA+GGG | 0.262632 | tig0016604:-29003 | Msa1358980:CDS |
| ATTGTTTATTTGATTATAAT+GGG | 0.268720 | tig0016604:-29037 | Msa1358980:CDS |
| CCTGCTACCATGAAAGTTCT+TGG | 0.277184 | tig0016604:-29247 | Msa1358980:CDS |
| CTCTTCCTACTTTCTGATAA+AGG | 0.295674 | tig0016604:+28365 | None:intergenic |
| GCTTGTGATTCTTGTTGTTA+TGG | 0.306594 | tig0016604:-28936 | Msa1358980:CDS |
| GTTGATGGGGAATGGGGTTT+GGG | 0.307539 | tig0016604:-28969 | Msa1358980:CDS |
| GATAATTATCCTCTTGTTGT+TGG | 0.311646 | tig0016604:-29355 | Msa1358980:CDS |
| CTGTCCGGTTACCTATTATT+CGG | 0.316049 | tig0016604:-28566 | Msa1358980:CDS |
| TTGATCAGTTGATGGGGAAT+GGG | 0.317412 | tig0016604:-28976 | Msa1358980:CDS |
| TTAAAAGCTGTCCAGATGTT+TGG | 0.318283 | tig0016604:+28284 | None:intergenic |
| CGTAGTGAGAAATGAATAAC+AGG | 0.324473 | tig0016604:+28425 | None:intergenic |
| TGTCCGGTTACCTATTATTC+GGG | 0.327444 | tig0016604:-28565 | Msa1358980:CDS |
| CAGTATCATCCCCGAATAAT+AGG | 0.328662 | tig0016604:+28555 | None:intergenic |
| ACATATGCATTTGTCATGAT+TGG | 0.339398 | tig0016604:+28707 | None:intergenic |
| TTTGATCAGTTGATGGGGAA+TGG | 0.352760 | tig0016604:-28977 | Msa1358980:CDS |
| GCTGTGACTGTTAGCATTGT+AGG | 0.358697 | tig0016604:-28134 | Msa1358980:CDS |
| TGCAATAAGATTAAGTCATC+AGG | 0.366366 | tig0016604:-28207 | Msa1358980:CDS |
| CTGTTGGTTCTCATATATAT+CGG | 0.366555 | tig0016604:-28320 | Msa1358980:CDS |
| GTCATGGTTAATGTTGGTAT+TGG | 0.367428 | tig0016604:-28156 | Msa1358980:CDS |
| GGTACACCAGACCCGTGATT+TGG | 0.370920 | tig0016604:+29325 | None:intergenic |
| AACAACACCAAGAACTTTCA+TGG | 0.378312 | tig0016604:+29240 | None:intergenic |
| ATGTGTAAAGCGTCATCTTA+TGG | 0.399986 | tig0016604:-29142 | Msa1358980:CDS |
| CCGATATACAACGAGCTTGA+AGG | 0.427017 | tig0016604:-28665 | Msa1358980:CDS |
| TCTTGGAATCCGGTTTAGTT+CGG | 0.429060 | tig0016604:-28501 | Msa1358980:CDS |
| GTGGATACTTTGGTATTTGA+GGG | 0.430206 | tig0016604:-28395 | Msa1358980:CDS |
| TGTCCAGATGTTTGGAATCA+TGG | 0.438941 | tig0016604:+28292 | None:intergenic |
| AGTGGATACTTTGGTATTTG+AGG | 0.440264 | tig0016604:-28396 | Msa1358980:CDS |
| TGATCAGTTGATGGGGAATG+GGG | 0.440283 | tig0016604:-28975 | Msa1358980:CDS |
| CCTTCAAGCTCGTTGTATAT+CGG | 0.440630 | tig0016604:+28665 | None:intergenic |
| AAATATGATGAAGAACTAAC+AGG | 0.441010 | tig0016604:+29499 | None:intergenic |
| GGAATGGGGTTTGGGATCAG+AGG | 0.442360 | tig0016604:-28961 | Msa1358980:CDS |
| AGTTCAAGGCCGAACTAAAC+CGG | 0.446759 | tig0016604:+28492 | None:intergenic |
| GTACCATGATTCCAAACATC+TGG | 0.451690 | tig0016604:-28295 | Msa1358980:CDS |
| CCAGACCCGTGATTTGGAAT+AGG | 0.454182 | tig0016604:+29331 | None:intergenic |
| GCAACAACGGCTGTTTCGTT+AGG | 0.456316 | tig0016604:-28251 | Msa1358980:CDS |
| CTAAAATCAGGAACCATCCT+AGG | 0.459986 | tig0016604:+28767 | None:intergenic |
| CAGGGAAAACAAGTATCAAA+TGG | 0.460714 | tig0016604:+28444 | None:intergenic |
| GTTAGCATTGTAGGAGTTGT+CGG | 0.463076 | tig0016604:-28125 | Msa1358980:CDS |
| TTGATAAGGATCTTGGAATC+CGG | 0.468353 | tig0016604:-28511 | Msa1358980:CDS |
| ATGCTATGGGTAGGCCTGCT+AGG | 0.468880 | tig0016604:-29105 | Msa1358980:CDS |
| CCCTAAATGATGAACCGAAC+CGG | 0.471664 | tig0016604:+29003 | None:intergenic |
| GGAAATTAGTGTCGAATTGT+TGG | 0.479421 | tig0016604:-29179 | Msa1358980:CDS |
| ATACCAAAGTATCCACTGTT+TGG | 0.479637 | tig0016604:+28402 | None:intergenic |
| GAGCTTGACTTCAGCTGCAT+CGG | 0.488598 | tig0016604:-28867 | Msa1358980:CDS |
| TATGCTGCAACGGCACTGTC+CGG | 0.495004 | tig0016604:-28581 | Msa1358980:CDS |
| ATCCCCGAATAATAGGTAAC+CGG | 0.498976 | tig0016604:+28562 | None:intergenic |
| GAAAGTAGGAAGAGATCGCT+AGG | 0.504058 | tig0016604:-28356 | Msa1358980:CDS |
| TGTTTATTTGATTATAATGG+GGG | 0.506452 | tig0016604:-29035 | Msa1358980:CDS |
| GTTGGTCCTATTCCAAATCA+CGG | 0.506802 | tig0016604:-29337 | Msa1358980:CDS |
| CCTATTCCAAATCACGGGTC+TGG | 0.511638 | tig0016604:-29331 | Msa1358980:CDS |
| GACTCGAACGATATAGTTCA+AGG | 0.512418 | tig0016604:+28478 | None:intergenic |
| GAGATTTGAGCCGCGTAGAA+CGG | 0.523045 | tig0016604:-28184 | Msa1358980:CDS |
| CCAAGAACTTTCATGGTAGC+AGG | 0.523622 | tig0016604:+29247 | None:intergenic |
| AGGGCTGACTGCAATTCTGT+TGG | 0.526397 | tig0016604:-28336 | Msa1358980:CDS |
| CTTGACTTCAGCTGCATCGG+TGG | 0.528392 | tig0016604:-28864 | Msa1358980:CDS |
| ACGCCAAACAGTGGATACTT+TGG | 0.531176 | tig0016604:-28405 | Msa1358980:CDS |
| ATCTCAGATAAAATCCTAGC+AGG | 0.533652 | tig0016604:+29091 | None:intergenic |
| AATCACGGGTCTGGTGTACC+TGG | 0.537363 | tig0016604:-29322 | Msa1358980:CDS |
| TTGTTTATTTGATTATAATG+GGG | 0.537532 | tig0016604:-29036 | Msa1358980:CDS |
| ATCTAAGGTTGATGATGATG+AGG | 0.540722 | tig0016604:-29401 | Msa1358980:CDS |
| AATCTTATTGCAACAAGAGG+TGG | 0.543383 | tig0016604:+28218 | None:intergenic |
| ACTACTACTATTATTGGGGC+AGG | 0.544363 | tig0016604:-29283 | Msa1358980:CDS |
| TGAGGTTGTTCAACATGCTA+TGG | 0.553920 | tig0016604:-29119 | Msa1358980:CDS |
| AGATGACGCTTTACACATAA+CGG | 0.555189 | tig0016604:+29147 | None:intergenic |
| TTGGTCCTATTCCAAATCAC+GGG | 0.557232 | tig0016604:-29336 | Msa1358980:CDS |
| TGTGATTCTTGTTGTTATGG+TGG | 0.559947 | tig0016604:-28933 | Msa1358980:CDS |
| TTGTAGTGACCCTTCCTACT+CGG | 0.560230 | tig0016604:+28621 | None:intergenic |
| AAGGAAAGATTGATGCTCCT+AGG | 0.564135 | tig0016604:-28784 | Msa1358980:CDS |
| CACCTCCTTTATCAGAAAGT+AGG | 0.564200 | tig0016604:-28370 | Msa1358980:CDS |
| CATCATGGTTTATGCTGCAA+CGG | 0.568976 | tig0016604:-28591 | Msa1358980:CDS |
| AGAAGATGAACCGAGTAGGA+AGG | 0.574177 | tig0016604:-28631 | Msa1358980:CDS |
| CAAATAAACAATTAAAACAC+CGG | 0.582905 | tig0016604:+29048 | None:intergenic |
| TTTGACTACTACTATTATTG+GGG | 0.583048 | tig0016604:-29287 | Msa1358980:CDS |
| CTTAATCTTATTGCAACAAG+AGG | 0.584381 | tig0016604:+28215 | None:intergenic |
| AAAGATTGATGCTCCTAGGA+TGG | 0.587388 | tig0016604:-28780 | Msa1358980:CDS |
| GAGGTTGTTCAACATGCTAT+GGG | 0.595730 | tig0016604:-29118 | Msa1358980:CDS |
| GAAGATGAACCGAGTAGGAA+GGG | 0.598449 | tig0016604:-28630 | Msa1358980:CDS |
| GCAATAAGATTAAGTCATCA+GGG | 0.602082 | tig0016604:-28206 | Msa1358980:CDS |
| GGAATAGGACCAACAACAAG+AGG | 0.604623 | tig0016604:+29346 | None:intergenic |
| TGTCGGCAATGTCTATAGCA+TGG | 0.606367 | tig0016604:-28108 | Msa1358980:CDS |
| TTGTTCAACATGCTATGGGT+AGG | 0.614131 | tig0016604:-29114 | Msa1358980:CDS |
| TAAGGTTGATGATGATGAGG+AGG | 0.622414 | tig0016604:-29398 | Msa1358980:CDS |
| GTCAAATTAAACACAGCACC+AGG | 0.622692 | tig0016604:+29304 | None:intergenic |
| TTTCTCACTACGCCAAACAG+TGG | 0.625897 | tig0016604:-28414 | Msa1358980:CDS |
| CCTACTCGGTTCATCTTCTG+CGG | 0.628118 | tig0016604:+28635 | None:intergenic |
| TAAGTTCACAGGTGCAACAA+CGG | 0.628689 | tig0016604:-28264 | Msa1358980:CDS |
| TTCCTACTTTCTGATAAAGG+AGG | 0.633147 | tig0016604:+28368 | None:intergenic |
| TTAGTGTCGAATTGTTGGTG+AGG | 0.634170 | tig0016604:-29174 | Msa1358980:CDS |
| AAAGTAGGAAGAGATCGCTA+GGG | 0.636934 | tig0016604:-28355 | Msa1358980:CDS |
| GTCCGGTTACCTATTATTCG+GGG | 0.637678 | tig0016604:-28564 | Msa1358980:CDS |
| CGGTTCGGTTCATCATTTAG+GGG | 0.639831 | tig0016604:-29002 | Msa1358980:CDS |
| CCGCAGAAGATGAACCGAGT+AGG | 0.645116 | tig0016604:-28635 | Msa1358980:CDS |
| ATCTTATCAAGCGAACAAAG+TGG | 0.658267 | tig0016604:+28899 | None:intergenic |
| TATACAACGAGCTTGAAGGT+AGG | 0.669040 | tig0016604:-28661 | Msa1358980:CDS |
| TTGAACTATATCGTTCGAGT+CGG | 0.681194 | tig0016604:-28476 | Msa1358980:CDS |
| TAAAGCGTCATCTTATGGTG+AGG | 0.735180 | tig0016604:-29137 | Msa1358980:CDS |
| ATGACAAAATCCGTTCTACG+CGG | 0.759656 | tig0016604:+28174 | None:intergenic |
| GTAGTGAGAAATGAATAACA+GGG | 0.781956 | tig0016604:+28426 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGTTTATTTGATTATAA+TGG | - | tig0016604:28591-28610 | Msa1358980:CDS | 10.0% |
| !! | ATTGTTTATTTGATTATAAT+GGG | - | tig0016604:28592-28611 | Msa1358980:CDS | 10.0% |
| !! | AATTGTTTATTTGATTATAA+TGG | - | tig0016604:28591-28610 | Msa1358980:CDS | 10.0% |
| !! | ATTGTTTATTTGATTATAAT+GGG | - | tig0016604:28592-28611 | Msa1358980:CDS | 10.0% |
| !! | TTGTTTATTTGATTATAATG+GGG | - | tig0016604:28593-28612 | Msa1358980:CDS | 15.0% |
| !! | TTGTTTATTTGATTATAATG+GGG | - | tig0016604:28593-28612 | Msa1358980:CDS | 15.0% |
| !! | AATTTGACTACTACTATTAT+TGG | - | tig0016604:28340-28359 | Msa1358980:CDS | 20.0% |
| !! | ATTTGACTACTACTATTATT+GGG | - | tig0016604:28341-28360 | Msa1358980:CDS | 20.0% |
| !!! | ATTGTCTTGATTATTTTGAT+GGG | - | tig0016604:28418-28437 | Msa1358980:CDS | 20.0% |
| !! | CAAATAAACAATTAAAACAC+CGG | + | tig0016604:28584-28603 | None:intergenic | 20.0% |
| !! | TGTTTATTTGATTATAATGG+GGG | - | tig0016604:28594-28613 | Msa1358980:CDS | 20.0% |
| !!! | TGTTTTGACTAATTTTGATA+AGG | - | tig0016604:29104-29123 | Msa1358980:CDS | 20.0% |
| !! | AATTTGACTACTACTATTAT+TGG | - | tig0016604:28340-28359 | Msa1358980:CDS | 20.0% |
| !! | ATTTGACTACTACTATTATT+GGG | - | tig0016604:28341-28360 | Msa1358980:CDS | 20.0% |
| !!! | ATTGTCTTGATTATTTTGAT+GGG | - | tig0016604:28418-28437 | Msa1358980:CDS | 20.0% |
| !! | CAAATAAACAATTAAAACAC+CGG | + | tig0016604:28584-28603 | None:intergenic | 20.0% |
| !! | TGTTTATTTGATTATAATGG+GGG | - | tig0016604:28594-28613 | Msa1358980:CDS | 20.0% |
| !!! | TGTTTTGACTAATTTTGATA+AGG | - | tig0016604:29104-29123 | Msa1358980:CDS | 20.0% |
| ! | AAATATGATGAAGAACTAAC+AGG | + | tig0016604:28133-28152 | None:intergenic | 25.0% |
| !! | TCAAAGATTATCTTTTGATG+AGG | - | tig0016604:28189-28208 | Msa1358980:CDS | 25.0% |
| !! | CAAAGATTATCTTTTGATGA+GGG | - | tig0016604:28190-28209 | Msa1358980:CDS | 25.0% |
| ! | TTTGACTACTACTATTATTG+GGG | - | tig0016604:28342-28361 | Msa1358980:CDS | 25.0% |
| !!! | GATTGTCTTGATTATTTTGA+TGG | - | tig0016604:28417-28436 | Msa1358980:CDS | 25.0% |
| !!! | TTGTCTTGATTATTTTGATG+GGG | - | tig0016604:28419-28438 | Msa1358980:CDS | 25.0% |
| !!! | TGTATTATTTTGAACAATGC+CGG | - | tig0016604:28562-28581 | Msa1358980:CDS | 25.0% |
| !!! | ACTAATTTTGATAAGGATCT+TGG | - | tig0016604:29111-29130 | Msa1358980:CDS | 25.0% |
| ! | AAATATGATGAAGAACTAAC+AGG | + | tig0016604:28133-28152 | None:intergenic | 25.0% |
| !! | TCAAAGATTATCTTTTGATG+AGG | - | tig0016604:28189-28208 | Msa1358980:CDS | 25.0% |
| !! | CAAAGATTATCTTTTGATGA+GGG | - | tig0016604:28190-28209 | Msa1358980:CDS | 25.0% |
| ! | TTTGACTACTACTATTATTG+GGG | - | tig0016604:28342-28361 | Msa1358980:CDS | 25.0% |
| !!! | GATTGTCTTGATTATTTTGA+TGG | - | tig0016604:28417-28436 | Msa1358980:CDS | 25.0% |
| !!! | TTGTCTTGATTATTTTGATG+GGG | - | tig0016604:28419-28438 | Msa1358980:CDS | 25.0% |
| !!! | TGTATTATTTTGAACAATGC+CGG | - | tig0016604:28562-28581 | Msa1358980:CDS | 25.0% |
| !!! | ACTAATTTTGATAAGGATCT+TGG | - | tig0016604:29111-29130 | Msa1358980:CDS | 25.0% |
| !! | GATTTTGATGAATCATTCTG+TGG | + | tig0016604:28166-28185 | None:intergenic | 30.0% |
| ! | GATAATTATCCTCTTGTTGT+TGG | - | tig0016604:28274-28293 | Msa1358980:CDS | 30.0% |
| !!! | AAAGTTCTTGGTGTTGTTTT+AGG | - | tig0016604:28394-28413 | Msa1358980:CDS | 30.0% |
| !!! | AAGTTCTTGGTGTTGTTTTA+GGG | - | tig0016604:28395-28414 | Msa1358980:CDS | 30.0% |
| !!! | TATTTTGATGGGGATTTTGT+CGG | - | tig0016604:28429-28448 | Msa1358980:CDS | 30.0% |
| !!! | GCTTTTATTAAGCTTGTTGA+AGG | - | tig0016604:28826-28845 | Msa1358980:CDS | 30.0% |
| ACATATGCATTTGTCATGAT+TGG | + | tig0016604:28925-28944 | None:intergenic | 30.0% | |
| GTAGTGAGAAATGAATAACA+GGG | + | tig0016604:29206-29225 | None:intergenic | 30.0% | |
| !! | CTGTTGGTTCTCATATATAT+CGG | - | tig0016604:29309-29328 | Msa1358980:CDS | 30.0% |
| CTTAATCTTATTGCAACAAG+AGG | + | tig0016604:29417-29436 | None:intergenic | 30.0% | |
| TGCAATAAGATTAAGTCATC+AGG | - | tig0016604:29422-29441 | Msa1358980:CDS | 30.0% | |
| GCAATAAGATTAAGTCATCA+GGG | - | tig0016604:29423-29442 | Msa1358980:CDS | 30.0% | |
| ! | GATTTTGTCATGGTTAATGT+TGG | - | tig0016604:29467-29486 | Msa1358980:CDS | 30.0% |
| !! | GATTTTGATGAATCATTCTG+TGG | + | tig0016604:28166-28185 | None:intergenic | 30.0% |
| ! | GATAATTATCCTCTTGTTGT+TGG | - | tig0016604:28274-28293 | Msa1358980:CDS | 30.0% |
| !!! | AAAGTTCTTGGTGTTGTTTT+AGG | - | tig0016604:28394-28413 | Msa1358980:CDS | 30.0% |
| !!! | AAGTTCTTGGTGTTGTTTTA+GGG | - | tig0016604:28395-28414 | Msa1358980:CDS | 30.0% |
| !!! | TATTTTGATGGGGATTTTGT+CGG | - | tig0016604:28429-28448 | Msa1358980:CDS | 30.0% |
| !!! | GCTTTTATTAAGCTTGTTGA+AGG | - | tig0016604:28826-28845 | Msa1358980:CDS | 30.0% |
| ACATATGCATTTGTCATGAT+TGG | + | tig0016604:28925-28944 | None:intergenic | 30.0% | |
| GTAGTGAGAAATGAATAACA+GGG | + | tig0016604:29206-29225 | None:intergenic | 30.0% | |
| !! | CTGTTGGTTCTCATATATAT+CGG | - | tig0016604:29309-29328 | Msa1358980:CDS | 30.0% |
| CTTAATCTTATTGCAACAAG+AGG | + | tig0016604:29417-29436 | None:intergenic | 30.0% | |
| TGCAATAAGATTAAGTCATC+AGG | - | tig0016604:29422-29441 | Msa1358980:CDS | 30.0% | |
| GCAATAAGATTAAGTCATCA+GGG | - | tig0016604:29423-29442 | Msa1358980:CDS | 30.0% | |
| ! | GATTTTGTCATGGTTAATGT+TGG | - | tig0016604:29467-29486 | Msa1358980:CDS | 30.0% |
| ! | AGATTATCTTTTGATGAGGG+TGG | - | tig0016604:28193-28212 | Msa1358980:CDS | 35.0% |
| !! | ATCTAAGGTTGATGATGATG+AGG | - | tig0016604:28228-28247 | Msa1358980:CDS | 35.0% |
| TATTATTGGGGCAGGAATTA+TGG | - | tig0016604:28354-28373 | Msa1358980:CDS | 35.0% | |
| AACAACACCAAGAACTTTCA+TGG | + | tig0016604:28392-28411 | None:intergenic | 35.0% | |
| ! | GGAAATTAGTGTCGAATTGT+TGG | - | tig0016604:28450-28469 | Msa1358980:CDS | 35.0% |
| AGATGACGCTTTACACATAA+CGG | + | tig0016604:28485-28504 | None:intergenic | 35.0% | |
| ! | ATGTGTAAAGCGTCATCTTA+TGG | - | tig0016604:28487-28506 | Msa1358980:CDS | 35.0% |
| ATCTCAGATAAAATCCTAGC+AGG | + | tig0016604:28541-28560 | None:intergenic | 35.0% | |
| !! | GCTTGTGATTCTTGTTGTTA+TGG | - | tig0016604:28693-28712 | Msa1358980:CDS | 35.0% |
| !! | TGTGATTCTTGTTGTTATGG+TGG | - | tig0016604:28696-28715 | Msa1358980:CDS | 35.0% |
| ATCTTATCAAGCGAACAAAG+TGG | + | tig0016604:28733-28752 | None:intergenic | 35.0% | |
| !!! | TCCTGATTTTAGCTCGAAAA+AGG | - | tig0016604:28873-28892 | Msa1358980:CDS | 35.0% |
| ! | CACTACAATTTTGTGCATCA+TGG | - | tig0016604:29023-29042 | Msa1358980:CDS | 35.0% |
| TTGATAAGGATCTTGGAATC+CGG | - | tig0016604:29118-29137 | Msa1358980:CDS | 35.0% | |
| TTGAACTATATCGTTCGAGT+CGG | - | tig0016604:29153-29172 | Msa1358980:CDS | 35.0% | |
| CAGGGAAAACAAGTATCAAA+TGG | + | tig0016604:29188-29207 | None:intergenic | 35.0% | |
| CGTAGTGAGAAATGAATAAC+AGG | + | tig0016604:29207-29226 | None:intergenic | 35.0% | |
| ! | ATACCAAAGTATCCACTGTT+TGG | + | tig0016604:29230-29249 | None:intergenic | 35.0% |
| AGTGGATACTTTGGTATTTG+AGG | - | tig0016604:29233-29252 | Msa1358980:CDS | 35.0% | |
| GTGGATACTTTGGTATTTGA+GGG | - | tig0016604:29234-29253 | Msa1358980:CDS | 35.0% | |
| TTCCTACTTTCTGATAAAGG+AGG | + | tig0016604:29264-29283 | None:intergenic | 35.0% | |
| CTCTTCCTACTTTCTGATAA+AGG | + | tig0016604:29267-29286 | None:intergenic | 35.0% | |
| TTAAAAGCTGTCCAGATGTT+TGG | + | tig0016604:29348-29367 | None:intergenic | 35.0% | |
| AATCTTATTGCAACAAGAGG+TGG | + | tig0016604:29414-29433 | None:intergenic | 35.0% | |
| GTCATGGTTAATGTTGGTAT+TGG | - | tig0016604:29473-29492 | Msa1358980:CDS | 35.0% | |
| ! | AGATTATCTTTTGATGAGGG+TGG | - | tig0016604:28193-28212 | Msa1358980:CDS | 35.0% |
| !! | ATCTAAGGTTGATGATGATG+AGG | - | tig0016604:28228-28247 | Msa1358980:CDS | 35.0% |
| TATTATTGGGGCAGGAATTA+TGG | - | tig0016604:28354-28373 | Msa1358980:CDS | 35.0% | |
| AACAACACCAAGAACTTTCA+TGG | + | tig0016604:28392-28411 | None:intergenic | 35.0% | |
| ! | GGAAATTAGTGTCGAATTGT+TGG | - | tig0016604:28450-28469 | Msa1358980:CDS | 35.0% |
| AGATGACGCTTTACACATAA+CGG | + | tig0016604:28485-28504 | None:intergenic | 35.0% | |
| ! | ATGTGTAAAGCGTCATCTTA+TGG | - | tig0016604:28487-28506 | Msa1358980:CDS | 35.0% |
| ATCTCAGATAAAATCCTAGC+AGG | + | tig0016604:28541-28560 | None:intergenic | 35.0% | |
| !! | GCTTGTGATTCTTGTTGTTA+TGG | - | tig0016604:28693-28712 | Msa1358980:CDS | 35.0% |
| !! | TGTGATTCTTGTTGTTATGG+TGG | - | tig0016604:28696-28715 | Msa1358980:CDS | 35.0% |
| ATCTTATCAAGCGAACAAAG+TGG | + | tig0016604:28733-28752 | None:intergenic | 35.0% | |
| !!! | TCCTGATTTTAGCTCGAAAA+AGG | - | tig0016604:28873-28892 | Msa1358980:CDS | 35.0% |
| ! | CACTACAATTTTGTGCATCA+TGG | - | tig0016604:29023-29042 | Msa1358980:CDS | 35.0% |
| TTGATAAGGATCTTGGAATC+CGG | - | tig0016604:29118-29137 | Msa1358980:CDS | 35.0% | |
| TTGAACTATATCGTTCGAGT+CGG | - | tig0016604:29153-29172 | Msa1358980:CDS | 35.0% | |
| CAGGGAAAACAAGTATCAAA+TGG | + | tig0016604:29188-29207 | None:intergenic | 35.0% | |
| CGTAGTGAGAAATGAATAAC+AGG | + | tig0016604:29207-29226 | None:intergenic | 35.0% | |
| ! | ATACCAAAGTATCCACTGTT+TGG | + | tig0016604:29230-29249 | None:intergenic | 35.0% |
| AGTGGATACTTTGGTATTTG+AGG | - | tig0016604:29233-29252 | Msa1358980:CDS | 35.0% | |
| GTGGATACTTTGGTATTTGA+GGG | - | tig0016604:29234-29253 | Msa1358980:CDS | 35.0% | |
| TTCCTACTTTCTGATAAAGG+AGG | + | tig0016604:29264-29283 | None:intergenic | 35.0% | |
| CTCTTCCTACTTTCTGATAA+AGG | + | tig0016604:29267-29286 | None:intergenic | 35.0% | |
| TTAAAAGCTGTCCAGATGTT+TGG | + | tig0016604:29348-29367 | None:intergenic | 35.0% | |
| AATCTTATTGCAACAAGAGG+TGG | + | tig0016604:29414-29433 | None:intergenic | 35.0% | |
| GTCATGGTTAATGTTGGTAT+TGG | - | tig0016604:29473-29492 | Msa1358980:CDS | 35.0% | |
| ! | TTATCTTTTGATGAGGGTGG+TGG | - | tig0016604:28196-28215 | Msa1358980:CDS | 40.0% |
| ! | TATCTTTTGATGAGGGTGGT+GGG | - | tig0016604:28197-28216 | Msa1358980:CDS | 40.0% |
| !!! | TGGTGGGTTTTTAGGATCTA+AGG | - | tig0016604:28213-28232 | Msa1358980:CDS | 40.0% |
| !! | TAAGGTTGATGATGATGAGG+AGG | - | tig0016604:28231-28250 | Msa1358980:CDS | 40.0% |
| GTTGGTCCTATTCCAAATCA+CGG | - | tig0016604:28292-28311 | Msa1358980:CDS | 40.0% | |
| TTGGTCCTATTCCAAATCAC+GGG | - | tig0016604:28293-28312 | Msa1358980:CDS | 40.0% | |
| GTCAAATTAAACACAGCACC+AGG | + | tig0016604:28328-28347 | None:intergenic | 40.0% | |
| ACTACTACTATTATTGGGGC+AGG | - | tig0016604:28346-28365 | Msa1358980:CDS | 40.0% | |
| ! | TTAGTGTCGAATTGTTGGTG+AGG | - | tig0016604:28455-28474 | Msa1358980:CDS | 40.0% |
| ! | TAAAGCGTCATCTTATGGTG+AGG | - | tig0016604:28492-28511 | Msa1358980:CDS | 40.0% |
| TGAGGTTGTTCAACATGCTA+TGG | - | tig0016604:28510-28529 | Msa1358980:CDS | 40.0% | |
| GAGGTTGTTCAACATGCTAT+GGG | - | tig0016604:28511-28530 | Msa1358980:CDS | 40.0% | |
| TTGTTCAACATGCTATGGGT+AGG | - | tig0016604:28515-28534 | Msa1358980:CDS | 40.0% | |
| ! | ATAATGGGGGATGTTATGTC+CGG | - | tig0016604:28607-28626 | Msa1358980:CDS | 40.0% |
| ! | AGGGGTTTTTGATCAGTTGA+TGG | - | tig0016604:28645-28664 | Msa1358980:CDS | 40.0% |
| ! | GGGGTTTTTGATCAGTTGAT+GGG | - | tig0016604:28646-28665 | Msa1358980:CDS | 40.0% |
| !! | GGGTTTTTGATCAGTTGATG+GGG | - | tig0016604:28647-28666 | Msa1358980:CDS | 40.0% |
| !! | TTTGATCAGTTGATGGGGAA+TGG | - | tig0016604:28652-28671 | Msa1358980:CDS | 40.0% |
| !! | TTGATCAGTTGATGGGGAAT+GGG | - | tig0016604:28653-28672 | Msa1358980:CDS | 40.0% |
| AAGGAAAGATTGATGCTCCT+AGG | - | tig0016604:28845-28864 | Msa1358980:CDS | 40.0% | |
| AAAGATTGATGCTCCTAGGA+TGG | - | tig0016604:28849-28868 | Msa1358980:CDS | 40.0% | |
| CTAAAATCAGGAACCATCCT+AGG | + | tig0016604:28865-28884 | None:intergenic | 40.0% | |
| !!! | GCCTTTTTCGAGCTAAAATC+AGG | + | tig0016604:28877-28896 | None:intergenic | 40.0% |
| TAGCTCGAAAAAGGCTATCT+TGG | - | tig0016604:28882-28901 | Msa1358980:CDS | 40.0% | |
| CCTTCAAGCTCGTTGTATAT+CGG | + | tig0016604:28967-28986 | None:intergenic | 40.0% | |
| TATACAACGAGCTTGAAGGT+AGG | - | tig0016604:28968-28987 | Msa1358980:CDS | 40.0% | |
| CATCATGGTTTATGCTGCAA+CGG | - | tig0016604:29038-29057 | Msa1358980:CDS | 40.0% | |
| CTGTCCGGTTACCTATTATT+CGG | - | tig0016604:29063-29082 | Msa1358980:CDS | 40.0% | |
| TGTCCGGTTACCTATTATTC+GGG | - | tig0016604:29064-29083 | Msa1358980:CDS | 40.0% | |
| ATCCCCGAATAATAGGTAAC+CGG | + | tig0016604:29070-29089 | None:intergenic | 40.0% | |
| CAGTATCATCCCCGAATAAT+AGG | + | tig0016604:29077-29096 | None:intergenic | 40.0% | |
| TCTTGGAATCCGGTTTAGTT+CGG | - | tig0016604:29128-29147 | Msa1358980:CDS | 40.0% | |
| GACTCGAACGATATAGTTCA+AGG | + | tig0016604:29154-29173 | None:intergenic | 40.0% | |
| CACCTCCTTTATCAGAAAGT+AGG | - | tig0016604:29259-29278 | Msa1358980:CDS | 40.0% | |
| AAAGTAGGAAGAGATCGCTA+GGG | - | tig0016604:29274-29293 | Msa1358980:CDS | 40.0% | |
| GTACCATGATTCCAAACATC+TGG | - | tig0016604:29334-29353 | Msa1358980:CDS | 40.0% | |
| ! | TGTCCAGATGTTTGGAATCA+TGG | + | tig0016604:29340-29359 | None:intergenic | 40.0% |
| !!! | TGGACAGCTTTTAAGTTCAC+AGG | - | tig0016604:29354-29373 | Msa1358980:CDS | 40.0% |
| TAAGTTCACAGGTGCAACAA+CGG | - | tig0016604:29365-29384 | Msa1358980:CDS | 40.0% | |
| ATGACAAAATCCGTTCTACG+CGG | + | tig0016604:29458-29477 | None:intergenic | 40.0% | |
| GTTAGCATTGTAGGAGTTGT+CGG | - | tig0016604:29504-29523 | Msa1358980:CDS | 40.0% | |
| ! | TTATCTTTTGATGAGGGTGG+TGG | - | tig0016604:28196-28215 | Msa1358980:CDS | 40.0% |
| ! | TATCTTTTGATGAGGGTGGT+GGG | - | tig0016604:28197-28216 | Msa1358980:CDS | 40.0% |
| !!! | TGGTGGGTTTTTAGGATCTA+AGG | - | tig0016604:28213-28232 | Msa1358980:CDS | 40.0% |
| !! | TAAGGTTGATGATGATGAGG+AGG | - | tig0016604:28231-28250 | Msa1358980:CDS | 40.0% |
| GTTGGTCCTATTCCAAATCA+CGG | - | tig0016604:28292-28311 | Msa1358980:CDS | 40.0% | |
| TTGGTCCTATTCCAAATCAC+GGG | - | tig0016604:28293-28312 | Msa1358980:CDS | 40.0% | |
| GTCAAATTAAACACAGCACC+AGG | + | tig0016604:28328-28347 | None:intergenic | 40.0% | |
| ACTACTACTATTATTGGGGC+AGG | - | tig0016604:28346-28365 | Msa1358980:CDS | 40.0% | |
| ! | TTAGTGTCGAATTGTTGGTG+AGG | - | tig0016604:28455-28474 | Msa1358980:CDS | 40.0% |
| ! | TAAAGCGTCATCTTATGGTG+AGG | - | tig0016604:28492-28511 | Msa1358980:CDS | 40.0% |
| TGAGGTTGTTCAACATGCTA+TGG | - | tig0016604:28510-28529 | Msa1358980:CDS | 40.0% | |
| GAGGTTGTTCAACATGCTAT+GGG | - | tig0016604:28511-28530 | Msa1358980:CDS | 40.0% | |
| TTGTTCAACATGCTATGGGT+AGG | - | tig0016604:28515-28534 | Msa1358980:CDS | 40.0% | |
| ! | ATAATGGGGGATGTTATGTC+CGG | - | tig0016604:28607-28626 | Msa1358980:CDS | 40.0% |
| ! | AGGGGTTTTTGATCAGTTGA+TGG | - | tig0016604:28645-28664 | Msa1358980:CDS | 40.0% |
| ! | GGGGTTTTTGATCAGTTGAT+GGG | - | tig0016604:28646-28665 | Msa1358980:CDS | 40.0% |
| !! | GGGTTTTTGATCAGTTGATG+GGG | - | tig0016604:28647-28666 | Msa1358980:CDS | 40.0% |
| !! | TTTGATCAGTTGATGGGGAA+TGG | - | tig0016604:28652-28671 | Msa1358980:CDS | 40.0% |
| !! | TTGATCAGTTGATGGGGAAT+GGG | - | tig0016604:28653-28672 | Msa1358980:CDS | 40.0% |
| AAGGAAAGATTGATGCTCCT+AGG | - | tig0016604:28845-28864 | Msa1358980:CDS | 40.0% | |
| AAAGATTGATGCTCCTAGGA+TGG | - | tig0016604:28849-28868 | Msa1358980:CDS | 40.0% | |
| CTAAAATCAGGAACCATCCT+AGG | + | tig0016604:28865-28884 | None:intergenic | 40.0% | |
| !!! | GCCTTTTTCGAGCTAAAATC+AGG | + | tig0016604:28877-28896 | None:intergenic | 40.0% |
| TAGCTCGAAAAAGGCTATCT+TGG | - | tig0016604:28882-28901 | Msa1358980:CDS | 40.0% | |
| CCTTCAAGCTCGTTGTATAT+CGG | + | tig0016604:28967-28986 | None:intergenic | 40.0% | |
| TATACAACGAGCTTGAAGGT+AGG | - | tig0016604:28968-28987 | Msa1358980:CDS | 40.0% | |
| CATCATGGTTTATGCTGCAA+CGG | - | tig0016604:29038-29057 | Msa1358980:CDS | 40.0% | |
| CTGTCCGGTTACCTATTATT+CGG | - | tig0016604:29063-29082 | Msa1358980:CDS | 40.0% | |
| TGTCCGGTTACCTATTATTC+GGG | - | tig0016604:29064-29083 | Msa1358980:CDS | 40.0% | |
| ATCCCCGAATAATAGGTAAC+CGG | + | tig0016604:29070-29089 | None:intergenic | 40.0% | |
| CAGTATCATCCCCGAATAAT+AGG | + | tig0016604:29077-29096 | None:intergenic | 40.0% | |
| TCTTGGAATCCGGTTTAGTT+CGG | - | tig0016604:29128-29147 | Msa1358980:CDS | 40.0% | |
| GACTCGAACGATATAGTTCA+AGG | + | tig0016604:29154-29173 | None:intergenic | 40.0% | |
| CACCTCCTTTATCAGAAAGT+AGG | - | tig0016604:29259-29278 | Msa1358980:CDS | 40.0% | |
| AAAGTAGGAAGAGATCGCTA+GGG | - | tig0016604:29274-29293 | Msa1358980:CDS | 40.0% | |
| GTACCATGATTCCAAACATC+TGG | - | tig0016604:29334-29353 | Msa1358980:CDS | 40.0% | |
| ! | TGTCCAGATGTTTGGAATCA+TGG | + | tig0016604:29340-29359 | None:intergenic | 40.0% |
| !!! | TGGACAGCTTTTAAGTTCAC+AGG | - | tig0016604:29354-29373 | Msa1358980:CDS | 40.0% |
| TAAGTTCACAGGTGCAACAA+CGG | - | tig0016604:29365-29384 | Msa1358980:CDS | 40.0% | |
| ATGACAAAATCCGTTCTACG+CGG | + | tig0016604:29458-29477 | None:intergenic | 40.0% | |
| GTTAGCATTGTAGGAGTTGT+CGG | - | tig0016604:29504-29523 | Msa1358980:CDS | 40.0% | |
| GGAATAGGACCAACAACAAG+AGG | + | tig0016604:28286-28305 | None:intergenic | 45.0% | |
| CCAAGAACTTTCATGGTAGC+AGG | + | tig0016604:28385-28404 | None:intergenic | 45.0% | |
| CCTGCTACCATGAAAGTTCT+TGG | - | tig0016604:28382-28401 | Msa1358980:CDS | 45.0% | |
| !! | TCCGGTTCGGTTCATCATTT+AGG | - | tig0016604:28625-28644 | Msa1358980:CDS | 45.0% |
| CCCTAAATGATGAACCGAAC+CGG | + | tig0016604:28629-28648 | None:intergenic | 45.0% | |
| !! | CCGGTTCGGTTCATCATTTA+GGG | - | tig0016604:28626-28645 | Msa1358980:CDS | 45.0% |
| !! | CGGTTCGGTTCATCATTTAG+GGG | - | tig0016604:28627-28646 | Msa1358980:CDS | 45.0% |
| !! | TGATCAGTTGATGGGGAATG+GGG | - | tig0016604:28654-28673 | Msa1358980:CDS | 45.0% |
| CCGATATACAACGAGCTTGA+AGG | - | tig0016604:28964-28983 | Msa1358980:CDS | 45.0% | |
| AGAAGATGAACCGAGTAGGA+AGG | - | tig0016604:28998-29017 | Msa1358980:CDS | 45.0% | |
| GAAGATGAACCGAGTAGGAA+GGG | - | tig0016604:28999-29018 | Msa1358980:CDS | 45.0% | |
| TTGTAGTGACCCTTCCTACT+CGG | + | tig0016604:29011-29030 | None:intergenic | 45.0% | |
| GTCCGGTTACCTATTATTCG+GGG | - | tig0016604:29065-29084 | Msa1358980:CDS | 45.0% | |
| AGTTCAAGGCCGAACTAAAC+CGG | + | tig0016604:29140-29159 | None:intergenic | 45.0% | |
| TTTCTCACTACGCCAAACAG+TGG | - | tig0016604:29215-29234 | Msa1358980:CDS | 45.0% | |
| ACGCCAAACAGTGGATACTT+TGG | - | tig0016604:29224-29243 | Msa1358980:CDS | 45.0% | |
| GAAAGTAGGAAGAGATCGCT+AGG | - | tig0016604:29273-29292 | Msa1358980:CDS | 45.0% | |
| !! | GCGTAGAACGGATTTTGTCA+TGG | - | tig0016604:29457-29476 | Msa1358980:CDS | 45.0% |
| GCTGTGACTGTTAGCATTGT+AGG | - | tig0016604:29495-29514 | Msa1358980:CDS | 45.0% | |
| TGTCGGCAATGTCTATAGCA+TGG | - | tig0016604:29521-29540 | Msa1358980:CDS | 45.0% | |
| GGAATAGGACCAACAACAAG+AGG | + | tig0016604:28286-28305 | None:intergenic | 45.0% | |
| CCAAGAACTTTCATGGTAGC+AGG | + | tig0016604:28385-28404 | None:intergenic | 45.0% | |
| CCTGCTACCATGAAAGTTCT+TGG | - | tig0016604:28382-28401 | Msa1358980:CDS | 45.0% | |
| !! | TCCGGTTCGGTTCATCATTT+AGG | - | tig0016604:28625-28644 | Msa1358980:CDS | 45.0% |
| CCCTAAATGATGAACCGAAC+CGG | + | tig0016604:28629-28648 | None:intergenic | 45.0% | |
| !! | CCGGTTCGGTTCATCATTTA+GGG | - | tig0016604:28626-28645 | Msa1358980:CDS | 45.0% |
| !! | CGGTTCGGTTCATCATTTAG+GGG | - | tig0016604:28627-28646 | Msa1358980:CDS | 45.0% |
| !! | TGATCAGTTGATGGGGAATG+GGG | - | tig0016604:28654-28673 | Msa1358980:CDS | 45.0% |
| CCGATATACAACGAGCTTGA+AGG | - | tig0016604:28964-28983 | Msa1358980:CDS | 45.0% | |
| AGAAGATGAACCGAGTAGGA+AGG | - | tig0016604:28998-29017 | Msa1358980:CDS | 45.0% | |
| GAAGATGAACCGAGTAGGAA+GGG | - | tig0016604:28999-29018 | Msa1358980:CDS | 45.0% | |
| TTGTAGTGACCCTTCCTACT+CGG | + | tig0016604:29011-29030 | None:intergenic | 45.0% | |
| GTCCGGTTACCTATTATTCG+GGG | - | tig0016604:29065-29084 | Msa1358980:CDS | 45.0% | |
| AGTTCAAGGCCGAACTAAAC+CGG | + | tig0016604:29140-29159 | None:intergenic | 45.0% | |
| TTTCTCACTACGCCAAACAG+TGG | - | tig0016604:29215-29234 | Msa1358980:CDS | 45.0% | |
| ACGCCAAACAGTGGATACTT+TGG | - | tig0016604:29224-29243 | Msa1358980:CDS | 45.0% | |
| GAAAGTAGGAAGAGATCGCT+AGG | - | tig0016604:29273-29292 | Msa1358980:CDS | 45.0% | |
| !! | GCGTAGAACGGATTTTGTCA+TGG | - | tig0016604:29457-29476 | Msa1358980:CDS | 45.0% |
| GCTGTGACTGTTAGCATTGT+AGG | - | tig0016604:29495-29514 | Msa1358980:CDS | 45.0% | |
| TGTCGGCAATGTCTATAGCA+TGG | - | tig0016604:29521-29540 | Msa1358980:CDS | 45.0% | |
| !!! | GATGAGGGTGGTGGGTTTTT+AGG | - | tig0016604:28205-28224 | Msa1358980:CDS | 50.0% |
| ! | CCAGACCCGTGATTTGGAAT+AGG | + | tig0016604:28301-28320 | None:intergenic | 50.0% |
| CCTATTCCAAATCACGGGTC+TGG | - | tig0016604:28298-28317 | Msa1358980:CDS | 50.0% | |
| !! | AGTTGATGGGGAATGGGGTT+TGG | - | tig0016604:28659-28678 | Msa1358980:CDS | 50.0% |
| ! | GTTGATGGGGAATGGGGTTT+GGG | - | tig0016604:28660-28679 | Msa1358980:CDS | 50.0% |
| GAGCTTGACTTCAGCTGCAT+CGG | - | tig0016604:28762-28781 | Msa1358980:CDS | 50.0% | |
| CCTACTCGGTTCATCTTCTG+CGG | + | tig0016604:28997-29016 | None:intergenic | 50.0% | |
| AGGGCTGACTGCAATTCTGT+TGG | - | tig0016604:29293-29312 | Msa1358980:CDS | 50.0% | |
| ! | GCAACAACGGCTGTTTCGTT+AGG | - | tig0016604:29378-29397 | Msa1358980:CDS | 50.0% |
| GAGATTTGAGCCGCGTAGAA+CGG | - | tig0016604:29445-29464 | Msa1358980:CDS | 50.0% | |
| !!! | GATGAGGGTGGTGGGTTTTT+AGG | - | tig0016604:28205-28224 | Msa1358980:CDS | 50.0% |
| ! | CCAGACCCGTGATTTGGAAT+AGG | + | tig0016604:28301-28320 | None:intergenic | 50.0% |
| CCTATTCCAAATCACGGGTC+TGG | - | tig0016604:28298-28317 | Msa1358980:CDS | 50.0% | |
| !! | AGTTGATGGGGAATGGGGTT+TGG | - | tig0016604:28659-28678 | Msa1358980:CDS | 50.0% |
| ! | GTTGATGGGGAATGGGGTTT+GGG | - | tig0016604:28660-28679 | Msa1358980:CDS | 50.0% |
| GAGCTTGACTTCAGCTGCAT+CGG | - | tig0016604:28762-28781 | Msa1358980:CDS | 50.0% | |
| CCTACTCGGTTCATCTTCTG+CGG | + | tig0016604:28997-29016 | None:intergenic | 50.0% | |
| AGGGCTGACTGCAATTCTGT+TGG | - | tig0016604:29293-29312 | Msa1358980:CDS | 50.0% | |
| ! | GCAACAACGGCTGTTTCGTT+AGG | - | tig0016604:29378-29397 | Msa1358980:CDS | 50.0% |
| GAGATTTGAGCCGCGTAGAA+CGG | - | tig0016604:29445-29464 | Msa1358980:CDS | 50.0% | |
| GGTACACCAGACCCGTGATT+TGG | + | tig0016604:28307-28326 | None:intergenic | 55.0% | |
| AATCACGGGTCTGGTGTACC+TGG | - | tig0016604:28307-28326 | Msa1358980:CDS | 55.0% | |
| ATGCTATGGGTAGGCCTGCT+AGG | - | tig0016604:28524-28543 | Msa1358980:CDS | 55.0% | |
| GGGGGATGTTATGTCCGGTT+CGG | - | tig0016604:28612-28631 | Msa1358980:CDS | 55.0% | |
| ! | GGAATGGGGTTTGGGATCAG+AGG | - | tig0016604:28668-28687 | Msa1358980:CDS | 55.0% |
| CTTGACTTCAGCTGCATCGG+TGG | - | tig0016604:28765-28784 | Msa1358980:CDS | 55.0% | |
| CCGCAGAAGATGAACCGAGT+AGG | - | tig0016604:28994-29013 | Msa1358980:CDS | 55.0% | |
| TATGCTGCAACGGCACTGTC+CGG | - | tig0016604:29048-29067 | Msa1358980:CDS | 55.0% | |
| GGTACACCAGACCCGTGATT+TGG | + | tig0016604:28307-28326 | None:intergenic | 55.0% | |
| AATCACGGGTCTGGTGTACC+TGG | - | tig0016604:28307-28326 | Msa1358980:CDS | 55.0% | |
| ATGCTATGGGTAGGCCTGCT+AGG | - | tig0016604:28524-28543 | Msa1358980:CDS | 55.0% | |
| GGGGGATGTTATGTCCGGTT+CGG | - | tig0016604:28612-28631 | Msa1358980:CDS | 55.0% | |
| ! | GGAATGGGGTTTGGGATCAG+AGG | - | tig0016604:28668-28687 | Msa1358980:CDS | 55.0% |
| CTTGACTTCAGCTGCATCGG+TGG | - | tig0016604:28765-28784 | Msa1358980:CDS | 55.0% | |
| CCGCAGAAGATGAACCGAGT+AGG | - | tig0016604:28994-29013 | Msa1358980:CDS | 55.0% | |
| TATGCTGCAACGGCACTGTC+CGG | - | tig0016604:29048-29067 | Msa1358980:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016604 | gene | 28094 | 29557 | 28094 | ID=Msa1358980;Name=Msa1358980 |
| tig0016604 | mRNA | 28094 | 29557 | 28094 | ID=Msa1358980-mRNA-1;Parent=Msa1358980;Name=Msa1358980-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|487 |
| tig0016604 | exon | 28094 | 29557 | 28094 | ID=Msa1358980-mRNA-1:exon:11153;Parent=Msa1358980-mRNA-1 |
| tig0016604 | CDS | 28094 | 29557 | 28094 | ID=Msa1358980-mRNA-1:cds;Parent=Msa1358980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
