Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360460 | XP_003589304.2 | 99.081 | 653 | 5 | 1 | 1 | 652 | 1 | 653 | 0.0 | 1328 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360460 | sp|Q9SX85|SEC3A_ARATH | 83.283 | 658 | 102 | 4 | 1 | 652 | 1 | 656 | 0.0 | 1119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360460 | G7I5A3 | 99.081 | 653 | 5 | 1 | 1 | 652 | 1 | 653 | 0.0 | 1328 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0579510 | Msa1360460 | 0.804852 | 1.770315e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360460 | MtrunA17_Chr1g0154401 | 99.081 | 653 | 5 | 1 | 1 | 652 | 1 | 653 | 0.0 | 1328 |
| Msa1360460 | MtrunA17_Chr3g0141311 | 78.473 | 655 | 130 | 4 | 1 | 652 | 1 | 647 | 0.0 | 1047 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360460 | AT1G47550.2 | 83.537 | 656 | 100 | 4 | 1 | 650 | 1 | 654 | 0.0 | 1120 |
| Msa1360460 | AT1G47550.1 | 83.283 | 658 | 102 | 4 | 1 | 652 | 1 | 656 | 0.0 | 1119 |
| Msa1360460 | AT1G47560.1 | 81.459 | 658 | 114 | 4 | 1 | 652 | 1 | 656 | 0.0 | 1091 |
Find 143 sgRNAs with CRISPR-Local
Find 695 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCATCTCTAAAGATGTTT+TGG | 0.191387 | tig0017062:+17562 | Msa1360460:CDS |
| TAAAGGCTCGCTTTCTAAAA+TGG | 0.192233 | tig0017062:-20158 | None:intergenic |
| TGATGATGATTTGGGAATTA+TGG | 0.206606 | tig0017062:+24018 | Msa1360460:CDS |
| AGAGGACATGGAGGCTCTTT+TGG | 0.215755 | tig0017062:+18568 | Msa1360460:CDS |
| AGTAATACCTCATTTATTAA+AGG | 0.218040 | tig0017062:-20175 | None:intergenic |
| TCCTAAGATGCCGTGACTTT+TGG | 0.251356 | tig0017062:-15221 | None:intergenic |
| ATAACAGAACGATATCTTTC+TGG | 0.263028 | tig0017062:+25904 | Msa1360460:CDS |
| TGCATAAGTGGGGTCAATAT+TGG | 0.263278 | tig0017062:-22770 | None:intergenic |
| GAGAAATTACTTTGCTAGTT+TGG | 0.269162 | tig0017062:+23084 | Msa1360460:CDS |
| GTTCATTTCTTTCAATTTGA+TGG | 0.269204 | tig0017062:-26120 | None:intergenic |
| TGAATCACTTCAGGATTTAC+TGG | 0.296040 | tig0017062:+24740 | Msa1360460:CDS |
| GAGCCACACTTTGGCTTCTA+AGG | 0.298652 | tig0017062:-17373 | None:intergenic |
| TGTTGTGGAGTTGGCTCTTT+GGG | 0.302230 | tig0017062:+17613 | Msa1360460:CDS |
| CCATGTCCTCTTCCTCTGCC+TGG | 0.306661 | tig0017062:-18556 | None:intergenic |
| AATCCAACTGTTTGGCTTGA+AGG | 0.341279 | tig0017062:+23723 | Msa1360460:CDS |
| CATTTGCTGCTTCCAGAGCC+TGG | 0.354262 | tig0017062:-20129 | None:intergenic |
| TCCAAAAGTCACGGCATCTT+AGG | 0.364442 | tig0017062:+15220 | Msa1360460:CDS |
| ACATTACTCTGAGTTGAAAC+AGG | 0.370628 | tig0017062:-18458 | None:intergenic |
| ATGTTGTGGAGTTGGCTCTT+TGG | 0.371883 | tig0017062:+17612 | Msa1360460:CDS |
| CATTTGCAAGCTGTTATTAC+GGG | 0.376820 | tig0017062:-22485 | None:intergenic |
| GCATTTGCAAGCTGTTATTA+CGG | 0.384833 | tig0017062:-22486 | None:intergenic |
| GCATAAGTGGGGTCAATATT+GGG | 0.400605 | tig0017062:-22769 | None:intergenic |
| AACAAATGTTGTAGACGATA+TGG | 0.408324 | tig0017062:+21320 | Msa1360460:CDS |
| CATCTAGAAATCCAACTGTT+TGG | 0.408587 | tig0017062:+23715 | Msa1360460:CDS |
| CAAGCTTTCTAGTCGTCATA+TGG | 0.410695 | tig0017062:+15252 | Msa1360460:CDS |
| AACAACAAACTCCGGCGAAA+TGG | 0.412068 | tig0017062:+15105 | Msa1360460:exon |
| GAAGAGAGAGCTCCAGGCTC+TGG | 0.412581 | tig0017062:+20117 | Msa1360460:CDS |
| TGTGTGTCGCAGGTGTTGTA+TGG | 0.421271 | tig0017062:+21285 | Msa1360460:intron |
| CCTCCAGGAGGTGTTGTTAA+CGG | 0.424284 | tig0017062:+23974 | Msa1360460:CDS |
| GATGAGAATGACAGTAAATC+TGG | 0.427456 | tig0017062:+24046 | Msa1360460:CDS |
| ACGTCTTCTTCAGCATTTGA+AGG | 0.429611 | tig0017062:+23293 | Msa1360460:CDS |
| CTCTAAACTTGCTTCTTCGC+CGG | 0.440685 | tig0017062:+23458 | Msa1360460:CDS |
| AGCTTTAAATGAATCACTTC+AGG | 0.446554 | tig0017062:+24731 | Msa1360460:CDS |
| TGAACGGAATGTTCGCCAAA+TGG | 0.447886 | tig0017062:+26138 | Msa1360460:CDS |
| GGAGTTGGCTCTTTGGGCTA+AGG | 0.449911 | tig0017062:+17619 | Msa1360460:CDS |
| AAGACTGAAGAGAGAGCTCC+AGG | 0.451275 | tig0017062:+20111 | Msa1360460:CDS |
| CATGTCCTCTTCCTCTGCCT+GGG | 0.452338 | tig0017062:-18555 | None:intergenic |
| GGCGAAATGGCGAAATCTAC+CGG | 0.456706 | tig0017062:+15118 | Msa1360460:exon |
| TCTAAACTTGCTTCTTCGCC+GGG | 0.459252 | tig0017062:+23459 | Msa1360460:CDS |
| TAGTTTGCAACGTGTTTGAC+AGG | 0.460366 | tig0017062:+22664 | Msa1360460:intron |
| AGCCTTGACAAGAATTGCTT+GGG | 0.460705 | tig0017062:+23409 | Msa1360460:CDS |
| TACCGCAGGTCAGCATGATC+AGG | 0.461449 | tig0017062:-23252 | None:intergenic |
| AGCTCTCATGCTTGCATAAG+TGG | 0.463912 | tig0017062:-22782 | None:intergenic |
| CTTCCTCTGCCTGGGAGACA+AGG | 0.464656 | tig0017062:-18547 | None:intergenic |
| GATAAGATGATCTTCTGCTT+AGG | 0.468986 | tig0017062:-15187 | None:intergenic |
| TTGCCGTTAACAACACCTCC+TGG | 0.473791 | tig0017062:-23977 | None:intergenic |
| TATCCCACTTCTGGTGGATG+AGG | 0.473804 | tig0017062:+23824 | Msa1360460:CDS |
| TCAGTCATAGCGGAAGCAAC+AGG | 0.474576 | tig0017062:-18494 | None:intergenic |
| GAGCCTTGACAAGAATTGCT+TGG | 0.477359 | tig0017062:+23408 | Msa1360460:intron |
| ACATCTATACCAACGACCTT+AGG | 0.483257 | tig0017062:-17593 | None:intergenic |
| AGATGGTCAAGATGCAAAGA+AGG | 0.483558 | tig0017062:-17547 | None:intergenic |
| GAACGGAATGTTCGCCAAAT+GGG | 0.491396 | tig0017062:+26139 | Msa1360460:CDS |
| TGTAGGATAGAACACCCATT+TGG | 0.494048 | tig0017062:-26153 | None:intergenic |
| TGTCTCCCAGGCAGAGGAAG+AGG | 0.497242 | tig0017062:+18550 | Msa1360460:CDS |
| CCAGGCAGAGGAAGAGGACA+TGG | 0.498118 | tig0017062:+18556 | Msa1360460:CDS |
| GGTCGCCTTCCTAAGGTCGT+TGG | 0.498133 | tig0017062:+17584 | Msa1360460:CDS |
| AAATTACTTTGCTAGTTTGG+TGG | 0.505402 | tig0017062:+23087 | Msa1360460:CDS |
| TGCTTGGCGACCTAGAGTCT+CGG | 0.508432 | tig0017062:+25962 | Msa1360460:CDS |
| GTTGTTAACGGCAACAAAGC+TGG | 0.515692 | tig0017062:+23986 | Msa1360460:CDS |
| TAACAGCTTGCAAATGCAAT+CGG | 0.519484 | tig0017062:+22492 | Msa1360460:CDS |
| GGTAGATTTCGCCATTTCGC+CGG | 0.521464 | tig0017062:-15116 | None:intergenic |
| GTTCCTACACTTGTTCCTCC+AGG | 0.522078 | tig0017062:+23959 | Msa1360460:CDS |
| GGTCAGAAAGCTGATGCAGC+AGG | 0.525891 | tig0017062:+25925 | Msa1360460:CDS |
| CTAGAGAGAGCAAGAACCCT+AGG | 0.526198 | tig0017062:-15280 | None:intergenic |
| GAGGTTCATTTGATGAAGAT+CGG | 0.527546 | tig0017062:+22686 | Msa1360460:CDS |
| TTTACCTCATCCACCAGAAG+TGG | 0.528959 | tig0017062:-23828 | None:intergenic |
| CTGCAAAACTATACAAGCTA+AGG | 0.529157 | tig0017062:+17117 | Msa1360460:CDS |
| TTTCATACAGCATTAACAAA+GGG | 0.529332 | tig0017062:+16821 | Msa1360460:intron |
| TGCATTGATATGCAGCGTAA+AGG | 0.531677 | tig0017062:-25877 | None:intergenic |
| CTATATCCTCTCTCATGTGC+CGG | 0.533397 | tig0017062:-21374 | None:intergenic |
| ATTGCGGAGGAGCCACACTT+TGG | 0.535826 | tig0017062:-17382 | None:intergenic |
| GCTCTCATGCTTGCATAAGT+GGG | 0.536094 | tig0017062:-22781 | None:intergenic |
| ATCAGATACTGTAGAAGTAT+CGG | 0.542477 | tig0017062:-23775 | None:intergenic |
| GTGTGTCGCAGGTGTTGTAT+GGG | 0.543774 | tig0017062:+21286 | Msa1360460:intron |
| AAGCGAGCCTTTAATAAATG+AGG | 0.548321 | tig0017062:+20168 | Msa1360460:CDS |
| ATGTCCTGCACTTGTACCGC+AGG | 0.550211 | tig0017062:-23266 | None:intergenic |
| TCTCAAAGTTTCTTTCAGAT+CGG | 0.551116 | tig0017062:+15079 | Msa1360460:five_prime_UTR |
| GAGCCTTCAAGCCAAACAGT+TGG | 0.551912 | tig0017062:-23726 | None:intergenic |
| GGTCGTTGGTATAGATGTTG+TGG | 0.552064 | tig0017062:+17598 | Msa1360460:CDS |
| TGGTATAGATGTTGTGGAGT+TGG | 0.552996 | tig0017062:+17604 | Msa1360460:CDS |
| CCGGAGTTCAACATCGTCGC+CGG | 0.554198 | tig0017062:-15137 | None:intergenic |
| ACTCAGAGTAATGTGAAAGA+TGG | 0.555269 | tig0017062:+18467 | Msa1360460:CDS |
| AGACCTTGTCTCCCAGGCAG+AGG | 0.555832 | tig0017062:+18544 | Msa1360460:CDS |
| AGTTCAGCCGTGTAGGTGAC+CGG | 0.556076 | tig0017062:+25995 | Msa1360460:CDS |
| GAGTTCGTTGGCAAACTCAC+GGG | 0.558303 | tig0017062:-23676 | None:intergenic |
| TCTAATGTGCAGGTATGTCA+TGG | 0.560159 | tig0017062:+20060 | Msa1360460:intron |
| CTGACCTGCGGTACAAGTGC+AGG | 0.560980 | tig0017062:+23262 | Msa1360460:CDS |
| GCATAGATATCCGAGACTCT+AGG | 0.561277 | tig0017062:-25972 | None:intergenic |
| GACGATATGGATGAATGGTT+AGG | 0.561367 | tig0017062:+21333 | Msa1360460:CDS |
| TGCAGGTATGTCATGGGTGT+TGG | 0.561387 | tig0017062:+20067 | Msa1360460:intron |
| TCGTCATATGGCTAAACCTA+GGG | 0.562263 | tig0017062:+15264 | Msa1360460:CDS |
| CGATGCGAAATATTGATGAC+AGG | 0.564291 | tig0017062:+17408 | Msa1360460:CDS |
| TTTCGCATCGTCCATTGCGG+AGG | 0.565572 | tig0017062:-17395 | None:intergenic |
| GTGTTCTATCCTACATTCCC+AGG | 0.567457 | tig0017062:+26161 | Msa1360460:CDS |
| AAAGTGTGGCTCCTCCGCAA+TGG | 0.571456 | tig0017062:+17384 | Msa1360460:CDS |
| GCGGTTGCGTGTACCTTCTG+AGG | 0.571549 | tig0017062:+22558 | Msa1360460:CDS |
| TGTACTAGCACGGAGTTCGT+TGG | 0.571800 | tig0017062:-23688 | None:intergenic |
| GTCGTCATATGGCTAAACCT+AGG | 0.574546 | tig0017062:+15263 | Msa1360460:CDS |
| GACCCAAGCAATTCTTGTCA+AGG | 0.576128 | tig0017062:-23411 | None:intergenic |
| CATATGACGACTAGAAAGCT+TGG | 0.578018 | tig0017062:-15251 | None:intergenic |
| GGAGTTCGTTGGCAAACTCA+CGG | 0.578167 | tig0017062:-23677 | None:intergenic |
| GGGCACTTCAAGACCGCGCA+AGG | 0.583310 | tig0017062:-22749 | None:intergenic |
| TGGCTTGAAGGCTCAACTAG+TGG | 0.583999 | tig0017062:+23735 | Msa1360460:CDS |
| CTAATGTGCAGGTATGTCAT+GGG | 0.585515 | tig0017062:+20061 | Msa1360460:intron |
| CGATAAGGGCATACCTCAGA+AGG | 0.586076 | tig0017062:-22571 | None:intergenic |
| ATCAAATTGAAAGAAATGAA+CGG | 0.588598 | tig0017062:+26122 | Msa1360460:CDS |
| CAATATACCGGTCACCTACA+CGG | 0.589431 | tig0017062:-26002 | None:intergenic |
| CATTACTCTGAGTTGAAACA+GGG | 0.589470 | tig0017062:-18457 | None:intergenic |
| ATCCGTGTTTCCAAAAGTCA+CGG | 0.589908 | tig0017062:+15211 | Msa1360460:CDS |
| ACCCAAAACATCTTTAGAGA+TGG | 0.596278 | tig0017062:-17564 | None:intergenic |
| AAAATGTAGAAGCATGTGAA+TGG | 0.596677 | tig0017062:+22716 | Msa1360460:CDS |
| ATCGGAGAAACAACAAACTC+CGG | 0.596903 | tig0017062:+15097 | Msa1360460:five_prime_UTR |
| TCACTTCAGGATTTACTGGA+CGG | 0.597289 | tig0017062:+24744 | Msa1360460:CDS |
| TCTATGCAGTTCAGCCGTGT+AGG | 0.604547 | tig0017062:+25988 | Msa1360460:CDS |
| TTACGCTGCATATCAATGCA+TGG | 0.604703 | tig0017062:+25880 | Msa1360460:CDS |
| TTGTAGACGATATGGATGAA+TGG | 0.606497 | tig0017062:+21328 | Msa1360460:CDS |
| TTGCTGATTCACAAGCTCGC+CGG | 0.608321 | tig0017062:-15156 | None:intergenic |
| CCTCCTGGAGGAACAAGTGT+AGG | 0.612956 | tig0017062:-23962 | None:intergenic |
| AACAGCGGGGACAGTTGAAG+AGG | 0.617770 | tig0017062:+23229 | Msa1360460:intron |
| ATTTCATACAGCATTAACAA+AGG | 0.620993 | tig0017062:+16820 | Msa1360460:intron |
| CAGAGTAATGTGAAAGATGG+TGG | 0.621486 | tig0017062:+18470 | Msa1360460:CDS |
| AAACTTGCTTCTTCGCCGGG+AGG | 0.622356 | tig0017062:+23462 | Msa1360460:CDS |
| CTATACCAACGACCTTAGGA+AGG | 0.627890 | tig0017062:-17589 | None:intergenic |
| TTACCTCATCCACCAGAAGT+GGG | 0.628965 | tig0017062:-23827 | None:intergenic |
| TTTGCAACGTGTTTGACAGG+AGG | 0.631196 | tig0017062:+22667 | Msa1360460:CDS |
| AGTGTAAATGTACACCCACT+AGG | 0.635330 | tig0017062:-17173 | None:intergenic |
| GCACATTCAATGTTAAACTC+CGG | 0.636021 | tig0017062:+21355 | Msa1360460:CDS |
| CATGAGAGAGGATATAGCAT+CGG | 0.642742 | tig0017062:+21380 | Msa1360460:CDS |
| ATATTTCGCATCGTCCATTG+CGG | 0.642787 | tig0017062:-17398 | None:intergenic |
| GGCCTGATCATGCTGACCTG+CGG | 0.645686 | tig0017062:+23250 | Msa1360460:CDS |
| CTCTCATGCTTGCATAAGTG+GGG | 0.646464 | tig0017062:-22780 | None:intergenic |
| TAGTGGGTGTACATTTACAC+TGG | 0.646809 | tig0017062:+17175 | Msa1360460:CDS |
| CCTACACTTGTTCCTCCAGG+AGG | 0.654770 | tig0017062:+23962 | Msa1360460:CDS |
| CCGGCGACGATGTTGAACTC+CGG | 0.656058 | tig0017062:+15137 | Msa1360460:CDS |
| TAAACTCCGGCACATGAGAG+AGG | 0.656316 | tig0017062:+21368 | Msa1360460:CDS |
| AGCTTGATAAGCTTCTTGAG+CGG | 0.662867 | tig0017062:+22539 | Msa1360460:CDS |
| TAACCTTAGAAGCCAAAGTG+TGG | 0.674900 | tig0017062:+17370 | Msa1360460:CDS |
| GGCAGAGGAAGAGGACATGG+AGG | 0.686109 | tig0017062:+18559 | Msa1360460:CDS |
| CAACTCTCTCTCAGTCATAG+CGG | 0.712038 | tig0017062:-18504 | None:intergenic |
| AAATAACAAATCTCTCATCG+AGG | 0.720933 | tig0017062:+22516 | Msa1360460:CDS |
| CCGTTAACAACACCTCCTGG+AGG | 0.723227 | tig0017062:-23974 | None:intergenic |
| TGGTTGACTAGTGCCTTGCG+CGG | 0.736160 | tig0017062:+22736 | Msa1360460:CDS |
| ATTACTCTGAGTTGAAACAG+GGG | 0.762722 | tig0017062:-18456 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAAAAATTTAAAATTAT+AGG | - | tig0017062:19521-19540 | None:intergenic | 0.0% |
| !!! | AAATAAAATTTTATTAAATA+TGG | - | tig0017062:19632-19651 | None:intergenic | 0.0% |
| !!! | ATTTTATATATATTTTTATT+TGG | + | tig0017062:20628-20647 | Msa1360460:intron | 0.0% |
| !!! | TTGTATTTTTTTTATTTTGT+AGG | + | tig0017062:17516-17535 | Msa1360460:intron | 10.0% |
| !! | TAATATTAATATGTTTGAAT+GGG | - | tig0017062:18026-18045 | None:intergenic | 10.0% |
| !! | ATAATATTAATATGTTTGAA+TGG | - | tig0017062:18027-18046 | None:intergenic | 10.0% |
| !! | CCTATATTATAAATAAAATT+TGG | - | tig0017062:18765-18784 | None:intergenic | 10.0% |
| !!! | CCAAATTTTATTTATAATAT+AGG | + | tig0017062:18762-18781 | Msa1360460:intron | 10.0% |
| !!! | AATATATGTATATTTTACAA+GGG | - | tig0017062:18981-19000 | None:intergenic | 10.0% |
| !!! | AAATATATGTATATTTTACA+AGG | - | tig0017062:18982-19001 | None:intergenic | 10.0% |
| !!! | AGTTGATAAAAAAATTTATA+GGG | - | tig0017062:19015-19034 | None:intergenic | 10.0% |
| !!! | AAGTTGATAAAAAAATTTAT+AGG | - | tig0017062:19016-19035 | None:intergenic | 10.0% |
| !!! | TAACCATATTTTTAATTATA+AGG | + | tig0017062:19131-19150 | Msa1360460:intron | 10.0% |
| !!! | TCTTTTTTTTAATTAAAAAG+TGG | - | tig0017062:20215-20234 | None:intergenic | 10.0% |
| !!! | TATATTTTTATTTGGTTTAT+TGG | + | tig0017062:20636-20655 | Msa1360460:intron | 10.0% |
| !!! | AATATTATTTTAAACTCAAA+AGG | - | tig0017062:22244-22263 | None:intergenic | 10.0% |
| !! | AAAATAATATTACTTAGATT+TGG | + | tig0017062:22253-22272 | Msa1360460:intron | 10.0% |
| !!! | ATATCTTTGAAAATAATTTA+TGG | + | tig0017062:22279-22298 | Msa1360460:intron | 10.0% |
| !!! | TTAATTTCTACAATTTTAAT+TGG | + | tig0017062:22876-22895 | Msa1360460:intron | 10.0% |
| !! | AAAAAATTATGTTGAAATAA+AGG | - | tig0017062:23865-23884 | None:intergenic | 10.0% |
| !! | AAAATTAACTTTGATATGTT+TGG | + | tig0017062:15929-15948 | Msa1360460:intron | 15.0% |
| !!! | AGTGATTATTTTGTTTTATA+AGG | + | tig0017062:16696-16715 | Msa1360460:intron | 15.0% |
| !!! | GTGATTATTTTGTTTTATAA+GGG | + | tig0017062:16697-16716 | Msa1360460:intron | 15.0% |
| !! | ACAAAAACAAAAAATAAACA+CGG | - | tig0017062:17052-17071 | None:intergenic | 15.0% |
| !!! | GTTTATTTTTTGTTTTTGTT+TGG | + | tig0017062:17053-17072 | Msa1360460:intron | 15.0% |
| !! | AAATCAATTAAAAGTTAATG+AGG | - | tig0017062:18226-18245 | None:intergenic | 15.0% |
| !! | TTATTTATTTATTCAATTGC+TGG | + | tig0017062:18678-18697 | Msa1360460:intron | 15.0% |
| !! | TTATTTATAATATAGGTACA+TGG | + | tig0017062:18769-18788 | Msa1360460:intron | 15.0% |
| !! | TGTCCTTATAATTAAAAATA+TGG | - | tig0017062:19137-19156 | None:intergenic | 15.0% |
| !! | AAAAAAAACTTAAATCAGAA+GGG | - | tig0017062:19439-19458 | None:intergenic | 15.0% |
| !! | AAAAAAAAACTTAAATCAGA+AGG | - | tig0017062:19440-19459 | None:intergenic | 15.0% |
| !! | GTAAAATCTTAAATTTGAAT+TGG | + | tig0017062:19464-19483 | Msa1360460:intron | 15.0% |
| !! | TAAATAAAAAAATTGTCAGT+TGG | + | tig0017062:19980-19999 | Msa1360460:intron | 15.0% |
| !! | ATATTATCCTTATTAATCTT+TGG | - | tig0017062:20922-20941 | None:intergenic | 15.0% |
| !!! | CTTGTTACAAATTTTTTATT+TGG | - | tig0017062:21056-21075 | None:intergenic | 15.0% |
| !! | TGCAAAATTTATACTTTAAA+AGG | + | tig0017062:21228-21247 | Msa1360460:intron | 15.0% |
| !! | CTAAAATAAGCAAATAAAAA+AGG | + | tig0017062:22193-22212 | Msa1360460:intron | 15.0% |
| !!! | CAGATTAGAAATTTTAAAAT+CGG | + | tig0017062:22411-22430 | Msa1360460:intron | 15.0% |
| !!! | AGATTAGAAATTTTAAAATC+GGG | + | tig0017062:22412-22431 | Msa1360460:intron | 15.0% |
| !! | AATTTCAAACATTTATTTAC+AGG | + | tig0017062:23653-23672 | Msa1360460:intron | 15.0% |
| !! | ATAAAATGTATAATTCTTCA+TGG | + | tig0017062:23891-23910 | Msa1360460:intron | 15.0% |
| !!! | TATGAAGATATCATTTTATA+AGG | - | tig0017062:25747-25766 | None:intergenic | 15.0% |
| !!! | CTAAACAGTTATTATTTCTT+AGG | - | tig0017062:15604-15623 | None:intergenic | 20.0% |
| !! | CTAAGAAATAATAACTGTTT+AGG | + | tig0017062:15602-15621 | Msa1360460:intron | 20.0% |
| !!! | TTGTTTTTGTTATATGTTAC+AGG | - | tig0017062:15784-15803 | None:intergenic | 20.0% |
| !! | TTAACAACTTACTATCAATT+TGG | - | tig0017062:16144-16163 | None:intergenic | 20.0% |
| !! | ATAGTAAGTTGTTAAAATAC+AGG | + | tig0017062:16149-16168 | Msa1360460:intron | 20.0% |
| !! | TAGTAAGTTGTTAAAATACA+GGG | + | tig0017062:16150-16169 | Msa1360460:intron | 20.0% |
| !!! | TTTTCGAAAATCTTTAACAA+CGG | + | tig0017062:16584-16603 | Msa1360460:intron | 20.0% |
| !!! | TTATTTTGTTTTATAAGGGA+TGG | + | tig0017062:16701-16720 | Msa1360460:intron | 20.0% |
| !! | GATTTACTCAAATTAAATCA+GGG | - | tig0017062:17981-18000 | None:intergenic | 20.0% |
| !! | TAGATTATAGATGTCTTAAT+TGG | + | tig0017062:18046-18065 | Msa1360460:intron | 20.0% |
| !! | AAAAGTTAATGAGGTTAATT+TGG | - | tig0017062:18217-18236 | None:intergenic | 20.0% |
| !!! | CAAAAAATGACAATTGTTTT+AGG | + | tig0017062:18349-18368 | Msa1360460:intron | 20.0% |
| !! | TTTCTACAATAATGTGAAAT+AGG | + | tig0017062:18424-18443 | Msa1360460:intron | 20.0% |
| !! | ATTAAGTCCTTTAAATTCTA+GGG | + | tig0017062:18701-18720 | Msa1360460:intron | 20.0% |
| !!! | TCCTTTTAATTACCTTAATT+AGG | + | tig0017062:19180-19199 | Msa1360460:intron | 20.0% |
| !! | ACCTAATTAAGGTAATTAAA+AGG | - | tig0017062:19184-19203 | None:intergenic | 20.0% |
| !! | TCAGATTAATTAAAAAAGAG+TGG | - | tig0017062:19236-19255 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCACAAGACTAA+TGG | + | tig0017062:19361-19380 | Msa1360460:intron | 20.0% |
| !!! | TTTTTTTTCACAAGACTAAT+GGG | + | tig0017062:19362-19381 | Msa1360460:intron | 20.0% |
| !!! | TGATATTTTAGTATCTATCA+AGG | + | tig0017062:19695-19714 | Msa1360460:intron | 20.0% |
| !!! | TTTGAAATTTTTGAGCAAAT+TGG | + | tig0017062:19734-19753 | Msa1360460:intron | 20.0% |
| !!! | TGTGTTTGTAATTTTTTTCA+AGG | + | tig0017062:19783-19802 | Msa1360460:intron | 20.0% |
| !!! | GTGTTTGTAATTTTTTTCAA+GGG | + | tig0017062:19784-19803 | Msa1360460:intron | 20.0% |
| !! | AGTAATACCTCATTTATTAA+AGG | - | tig0017062:20178-20197 | None:intergenic | 20.0% |
| !! | TAATAACAATCAAACAAAAG+TGG | - | tig0017062:20250-20269 | None:intergenic | 20.0% |
| !!! | AAAATTAAGAAGTACAAAAC+TGG | + | tig0017062:20355-20374 | Msa1360460:intron | 20.0% |
| !! | ATATATTGCATAGTGTATTT+AGG | - | tig0017062:20595-20614 | None:intergenic | 20.0% |
| !! | TAATTAGACAATACAATTGA+GGG | - | tig0017062:20836-20855 | None:intergenic | 20.0% |
| !! | TTAATTAGACAATACAATTG+AGG | - | tig0017062:20837-20856 | None:intergenic | 20.0% |
| !! | TTATTATCATAAATGTGAAG+TGG | - | tig0017062:20891-20910 | None:intergenic | 20.0% |
| !! | AAATACACCAAAGATTAATA+AGG | + | tig0017062:20912-20931 | Msa1360460:intron | 20.0% |
| !! | CAAAAGGAAGATATTAAAAA+GGG | - | tig0017062:22228-22247 | None:intergenic | 20.0% |
| !! | TCAAAAGGAAGATATTAAAA+AGG | - | tig0017062:22229-22248 | None:intergenic | 20.0% |
| !!! | GATTAGAAATTTTAAAATCG+GGG | + | tig0017062:22413-22432 | Msa1360460:intron | 20.0% |
| !!! | TACTTTTTTGTTTGTTTTGA+TGG | + | tig0017062:22442-22461 | Msa1360460:intron | 20.0% |
| !!! | AAATTGTATCTAATTTTAGC+TGG | + | tig0017062:22596-22615 | Msa1360460:intron | 20.0% |
| !! | ATCATTAAAATAAATAAGCC+AGG | - | tig0017062:22631-22650 | None:intergenic | 20.0% |
| !!! | TTTCTACAATTTTAATTGGT+TGG | + | tig0017062:22880-22899 | Msa1360460:intron | 20.0% |
| !! | AATCAAAATAGATGACTTTA+AGG | - | tig0017062:22978-22997 | None:intergenic | 20.0% |
| !!! | AATTAAAATCTACTTTTGTC+AGG | + | tig0017062:23044-23063 | Msa1360460:CDS | 20.0% |
| !! | AATTCTTGGATTGAATTTAT+TGG | + | tig0017062:23183-23202 | Msa1360460:intron | 20.0% |
| !!! | TGATATTTTTAAAAGATGAG+AGG | + | tig0017062:24819-24838 | Msa1360460:intron | 20.0% |
| !!! | GATATTTTTAAAAGATGAGA+GGG | + | tig0017062:24820-24839 | Msa1360460:intron | 20.0% |
| !! | ATCTTGAGATATACAAAATA+TGG | + | tig0017062:25205-25224 | Msa1360460:intron | 20.0% |
| !! | TTCTATATACAAAAAGACAT+AGG | + | tig0017062:25557-25576 | Msa1360460:intron | 20.0% |
| !!! | GTTTTCCAATTAAATGAATT+GGG | - | tig0017062:26074-26093 | None:intergenic | 20.0% |
| !!! | AGTTTTCCAATTAAATGAAT+TGG | - | tig0017062:26075-26094 | None:intergenic | 20.0% |
| !!! | TCATTTAATTGGAAAACTTT+TGG | + | tig0017062:26077-26096 | Msa1360460:intron | 20.0% |
| !! | ATCAAATTGAAAGAAATGAA+CGG | + | tig0017062:26122-26141 | Msa1360460:CDS | 20.0% |
| !! | GTTTTATAATGCATAAGCTA+TGG | + | tig0017062:15624-15643 | Msa1360460:intron | 25.0% |
| !!! | TACATCTCTAGAATCAAATA+TGG | - | tig0017062:15910-15929 | None:intergenic | 25.0% |
| ! | ACTCTAATAAAATGTCAAGT+TGG | - | tig0017062:16211-16230 | None:intergenic | 25.0% |
| !! | TTTGAAATAGTCATAATCTC+AGG | + | tig0017062:16241-16260 | Msa1360460:intron | 25.0% |
| ! | TTGAAATAGTCATAATCTCA+GGG | + | tig0017062:16242-16261 | Msa1360460:intron | 25.0% |
| !!! | AAATTAGTCTTTAACTTTGC+AGG | - | tig0017062:16284-16303 | None:intergenic | 25.0% |
| ! | TGCAAAGTTAAAGACTAATT+TGG | + | tig0017062:16283-16302 | Msa1360460:intron | 25.0% |
| ! | AAAGTTAAAGACTAATTTGG+CGG | + | tig0017062:16286-16305 | Msa1360460:intron | 25.0% |
| ! | AACGGATAAAACTTTCAAAA+AGG | + | tig0017062:16602-16621 | Msa1360460:intron | 25.0% |
| ! | ACGGATAAAACTTTCAAAAA+GGG | + | tig0017062:16603-16622 | Msa1360460:intron | 25.0% |
| ! | GAAATTTAACAAATGATCAC+AGG | - | tig0017062:16769-16788 | None:intergenic | 25.0% |
| !! | TTTCACATTTGTGTTATTGT+TGG | + | tig0017062:16785-16804 | Msa1360460:intron | 25.0% |
| ! | ATTTCATACAGCATTAACAA+AGG | + | tig0017062:16820-16839 | Msa1360460:intron | 25.0% |
| ! | TTTCATACAGCATTAACAAA+GGG | + | tig0017062:16821-16840 | Msa1360460:intron | 25.0% |
| ! | CCAAATAAAAGAGAATAAAG+GGG | - | tig0017062:16916-16935 | None:intergenic | 25.0% |
| ! | CCCAAATAAAAGAGAATAAA+GGG | - | tig0017062:16917-16936 | None:intergenic | 25.0% |
| !!! | CCCTTTATTCTCTTTTATTT+GGG | + | tig0017062:16914-16933 | Msa1360460:intron | 25.0% |
| ! | TCCCAAATAAAAGAGAATAA+AGG | - | tig0017062:16918-16937 | None:intergenic | 25.0% |
| ! | ACAAGAAACTAGTTAATAGA+AGG | - | tig0017062:17088-17107 | None:intergenic | 25.0% |
| ! | AGCATAAGATCTTTCATTTA+TGG | - | tig0017062:17208-17227 | None:intergenic | 25.0% |
| ! | AATTCAAGAAGCAAATGATT+AGG | - | tig0017062:17320-17339 | None:intergenic | 25.0% |
| !! | TCTAAGAGTGTATAATTTAG+TGG | + | tig0017062:17452-17471 | Msa1360460:intron | 25.0% |
| ! | TAATAATAACTTACTATGCG+TGG | + | tig0017062:17738-17757 | Msa1360460:intron | 25.0% |
| ! | TCTTAAACTCTAAATCTGTT+CGG | + | tig0017062:17818-17837 | Msa1360460:intron | 25.0% |
| ! | CACTTAAAAACATCAAAACA+AGG | - | tig0017062:17898-17917 | None:intergenic | 25.0% |
| !!! | TGTTTTGATGTTTTTAAGTG+AGG | + | tig0017062:17898-17917 | Msa1360460:intron | 25.0% |
| ! | GGATTTACTCAAATTAAATC+AGG | - | tig0017062:17982-18001 | None:intergenic | 25.0% |
| !! | ACATACTTTGACAATTTTTG+TGG | - | tig0017062:18135-18154 | None:intergenic | 25.0% |
| !! | ATGTCATTTCACACAAATTA+AGG | + | tig0017062:18151-18170 | Msa1360460:intron | 25.0% |
| !!! | TATGACTTAGAAGGTATTAT+TGG | + | tig0017062:18299-18318 | Msa1360460:intron | 25.0% |
| ! | TGACAATTAATATGAGACAA+AGG | + | tig0017062:18392-18411 | Msa1360460:intron | 25.0% |
| ! | GACAATTAATATGAGACAAA+GGG | + | tig0017062:18393-18412 | Msa1360460:intron | 25.0% |
| ! | GATTAAGTCCTTTAAATTCT+AGG | + | tig0017062:18700-18719 | Msa1360460:intron | 25.0% |
| ! | TTTGGCTAGAAATTGTATAA+AGG | - | tig0017062:18747-18766 | None:intergenic | 25.0% |
| !!! | TAAGGGTATAACTACAATTT+TGG | - | tig0017062:18814-18833 | None:intergenic | 25.0% |
| ! | AATTGTAGTTATACCCTTAT+TGG | + | tig0017062:18815-18834 | Msa1360460:intron | 25.0% |
| ! | ATTGTAGTTATACCCTTATT+GGG | + | tig0017062:18816-18835 | Msa1360460:intron | 25.0% |
| ! | AAACATTTATCTAATGCCAA+AGG | - | tig0017062:18896-18915 | None:intergenic | 25.0% |
| !!! | GGTGGTCAAAATTTTAATAA+AGG | + | tig0017062:19061-19080 | Msa1360460:intron | 25.0% |
| ! | TTAGTCCATAAAACATTACA+CGG | - | tig0017062:19103-19122 | None:intergenic | 25.0% |
| ! | ATAGCATGTCTATATATTTG+TGG | + | tig0017062:19205-19224 | Msa1360460:intron | 25.0% |
| ! | TAAAATTATAGGACATAGCA+TGG | - | tig0017062:19510-19529 | None:intergenic | 25.0% |
| !! | AATTGGCATTTTCAATTCTT+AGG | + | tig0017062:19751-19770 | Msa1360460:intron | 25.0% |
| !! | ATTGGCATTTTCAATTCTTA+GGG | + | tig0017062:19752-19771 | Msa1360460:intron | 25.0% |
| !!! | ATTTTTTTCAAGGGTATCTT+TGG | + | tig0017062:19793-19812 | Msa1360460:intron | 25.0% |
| !!! | TTTTTTTCAAGGGTATCTTT+GGG | + | tig0017062:19794-19813 | Msa1360460:intron | 25.0% |
| !! | TAATATTTTCTCAAGAGTGA+AGG | - | tig0017062:19820-19839 | None:intergenic | 25.0% |
| !!! | TCCAGAAAATTTTGATGATA+GGG | - | tig0017062:19858-19877 | None:intergenic | 25.0% |
| !!! | ATCCAGAAAATTTTGATGAT+AGG | - | tig0017062:19859-19878 | None:intergenic | 25.0% |
| ! | ACATATGAATTCTCTAAACT+AGG | - | tig0017062:19906-19925 | None:intergenic | 25.0% |
| !! | ATTTTTAATGATCTCCAAGT+TGG | - | tig0017062:20289-20308 | None:intergenic | 25.0% |
| ! | TCAATTCTTGTTGCAAATTT+GGG | - | tig0017062:20336-20355 | None:intergenic | 25.0% |
| ! | TTCAATTCTTGTTGCAAATT+TGG | - | tig0017062:20337-20356 | None:intergenic | 25.0% |
| !! | CATCTTGAATGATCATATTT+TGG | - | tig0017062:20398-20417 | None:intergenic | 25.0% |
| ! | AAACTAAAGCTAGATTGATT+AGG | + | tig0017062:20435-20454 | Msa1360460:intron | 25.0% |
| ! | TAAGAACTGTAAAAGATAGA+GGG | + | tig0017062:20465-20484 | Msa1360460:intron | 25.0% |
| ! | TTGACCTTTATATTGTTAGA+TGG | + | tig0017062:20533-20552 | Msa1360460:intron | 25.0% |
| ! | TCATCCATCTAACAATATAA+AGG | - | tig0017062:20540-20559 | None:intergenic | 25.0% |
| ! | TTATATTGTTAGATGGATGA+TGG | + | tig0017062:20540-20559 | Msa1360460:intron | 25.0% |
| !! | TTGAAAATGACACTCTTTTT+GGG | - | tig0017062:20781-20800 | None:intergenic | 25.0% |
| !! | ATTGAAAATGACACTCTTTT+TGG | - | tig0017062:20782-20801 | None:intergenic | 25.0% |
| ! | AATTAGACAATACAATTGAG+GGG | - | tig0017062:20835-20854 | None:intergenic | 25.0% |
| ! | GAAGTGGAAAATAATGATTT+CGG | - | tig0017062:20875-20894 | None:intergenic | 25.0% |
| ! | GATTAAGAAAAGATGACAAA+TGG | - | tig0017062:20969-20988 | None:intergenic | 25.0% |
| !! | TTTTCTTAATCTGTGTGAAA+TGG | + | tig0017062:20978-20997 | Msa1360460:intron | 25.0% |
| ! | GTATAACAGAGAAAACAAAA+GGG | - | tig0017062:21606-21625 | None:intergenic | 25.0% |
| ! | AGTATAACAGAGAAAACAAA+AGG | - | tig0017062:21607-21626 | None:intergenic | 25.0% |
| ! | TATTTCCATTTCTGTTCTTA+AGG | - | tig0017062:21672-21691 | None:intergenic | 25.0% |
| !!! | TCTTTCTTTCAGTTTTAAAC+TGG | - | tig0017062:21760-21779 | None:intergenic | 25.0% |
| !!! | AGCAGTTTTTATTTGTATGA+GGG | + | tig0017062:21816-21835 | Msa1360460:intron | 25.0% |
| ! | TAGATACAATTTACCGATAA+GGG | - | tig0017062:22588-22607 | None:intergenic | 25.0% |
| ! | TTAGATACAATTTACCGATA+AGG | - | tig0017062:22589-22608 | None:intergenic | 25.0% |
| !!! | TTATTTTAATGATGCCTTTG+TGG | + | tig0017062:22638-22657 | Msa1360460:intron | 25.0% |
| !!! | TATTTTAATGATGCCTTTGT+GGG | + | tig0017062:22639-22658 | Msa1360460:intron | 25.0% |
| ! | TTTCTCTTTGTTAAATCATC+TGG | + | tig0017062:22824-22843 | Msa1360460:intron | 25.0% |
| !!! | AATTGAGAGTACTATGAATT+TGG | + | tig0017062:22907-22926 | Msa1360460:intron | 25.0% |
| !!! | ATTGAGAGTACTATGAATTT+GGG | + | tig0017062:22908-22927 | Msa1360460:intron | 25.0% |
| !!! | TGATAAAAGTTACTTTTCTC+AGG | + | tig0017062:23123-23142 | Msa1360460:CDS | 25.0% |
| !!! | AATCGTTACTTTTGAATTCT+TGG | + | tig0017062:23169-23188 | Msa1360460:intron | 25.0% |
| ! | AAAGATAAATAAGCAAGTTG+TGG | - | tig0017062:23545-23564 | None:intergenic | 25.0% |
| !!! | ATGCTTTGCTTTTTATGTTT+TGG | + | tig0017062:23609-23628 | Msa1360460:intron | 25.0% |
| ! | TTTATTGAGTGAAATCAATG+TGG | - | tig0017062:24236-24255 | None:intergenic | 25.0% |
| ! | CATTAGATATAACTTCAAAG+AGG | - | tig0017062:24292-24311 | None:intergenic | 25.0% |
| ! | TTAAACAGTGGTTTATTGTA+TGG | + | tig0017062:24559-24578 | Msa1360460:intron | 25.0% |
| !!! | TTTTAGTTGTTGCATAATGT+AGG | + | tig0017062:24630-24649 | Msa1360460:intron | 25.0% |
| !!! | CAGAATTTTTTCCTACAAAA+TGG | - | tig0017062:24701-24720 | None:intergenic | 25.0% |
| !! | TGTGTAATTTCTTTTTCTTG+TGG | + | tig0017062:24944-24963 | Msa1360460:intron | 25.0% |
| !! | GTGTAATTTCTTTTTCTTGT+GGG | + | tig0017062:24945-24964 | Msa1360460:intron | 25.0% |
| !! | TGTAATTTCTTTTTCTTGTG+GGG | + | tig0017062:24946-24965 | Msa1360460:intron | 25.0% |
| ! | AAAATATTTAGAAGCCAAGT+GGG | + | tig0017062:25056-25075 | Msa1360460:intron | 25.0% |
| !!! | GATTGTTTGAGTTCATTTTT+GGG | - | tig0017062:25188-25207 | None:intergenic | 25.0% |
| !!! | AGATTGTTTGAGTTCATTTT+TGG | - | tig0017062:25189-25208 | None:intergenic | 25.0% |
| ! | ATATACAAAATATGGACAGA+GGG | + | tig0017062:25213-25232 | Msa1360460:intron | 25.0% |
| ! | ATACAAAAGTCCAATAATGT+TGG | - | tig0017062:25700-25719 | None:intergenic | 25.0% |
| ! | AAGATGCTTTATATGATTTC+AGG | + | tig0017062:25813-25832 | Msa1360460:intron | 25.0% |
| ! | AATAGTCTTCTTCAATATAC+CGG | - | tig0017062:26017-26036 | None:intergenic | 25.0% |
| ! | CTCAATCTTCTAAATGTATT+TGG | - | tig0017062:26044-26063 | None:intergenic | 25.0% |
| ! | ACTAACCCAATTCATTTAAT+TGG | + | tig0017062:26066-26085 | Msa1360460:intron | 25.0% |
| ! | GTTCATTTCTTTCAATTTGA+TGG | - | tig0017062:26123-26142 | None:intergenic | 25.0% |
| TCTCAAAGTTTCTTTCAGAT+CGG | + | tig0017062:15079-15098 | Msa1360460:five_prime_UTR | 30.0% | |
| GCATAAGCAAAAGTGAAATT+AGG | - | tig0017062:15312-15331 | None:intergenic | 30.0% | |
| ! | TCATTTTCTCAAATAACCAC+CGG | - | tig0017062:15448-15467 | None:intergenic | 30.0% |
| TTGACTGTTATTACATGTGT+CGG | + | tig0017062:15473-15492 | Msa1360460:intron | 30.0% | |
| ATTTGACGATGAAATGTAGA+AGG | + | tig0017062:15552-15571 | Msa1360460:intron | 30.0% | |
| ! | ACATACATTTAGGGTTTGTT+TGG | - | tig0017062:15866-15885 | None:intergenic | 30.0% |
| ACAAACCCTAAATGTATGTT+TGG | + | tig0017062:15867-15886 | Msa1360460:intron | 30.0% | |
| TGGAACCAAACATACATTTA+GGG | - | tig0017062:15875-15894 | None:intergenic | 30.0% | |
| GAGACTAAATTGATTGTTAG+TGG | + | tig0017062:16105-16124 | Msa1360460:intron | 30.0% | |
| ACAGTAAGTGGTTAAGTATA+GGG | + | tig0017062:16184-16203 | Msa1360460:intron | 30.0% | |
| TGAAATAGTCATAATCTCAG+GGG | + | tig0017062:16243-16262 | Msa1360460:intron | 30.0% | |
| ! | ATTTTTGTGAGATAGCTAGT+TGG | + | tig0017062:16348-16367 | Msa1360460:intron | 30.0% |
| !!! | TCGAGTTTTGAAGTATTCTA+CGG | + | tig0017062:16865-16884 | Msa1360460:CDS | 30.0% |
| AATAAAAGAGAATAAAGGGG+TGG | - | tig0017062:16913-16932 | None:intergenic | 30.0% | |
| ! | CCCCTTTATTCTCTTTTATT+TGG | + | tig0017062:16913-16932 | Msa1360460:intron | 30.0% |
| ATGAAAAACAACAGTCAAAG+AGG | - | tig0017062:17028-17047 | None:intergenic | 30.0% | |
| ! | TTTTAACAAACGATCCTAGT+GGG | + | tig0017062:17159-17178 | Msa1360460:CDS | 30.0% |
| ATGAATGCATATGTCTTGTA+GGG | + | tig0017062:17341-17360 | Msa1360460:intron | 30.0% | |
| !! | ACCATCTCTAAAGATGTTTT+GGG | + | tig0017062:17563-17582 | Msa1360460:CDS | 30.0% |
| !! | TAAAGAAGCACTTATAAGAC+TGG | - | tig0017062:17663-17682 | None:intergenic | 30.0% |
| TCTTTACAATCAAATAGCCA+TGG | + | tig0017062:17677-17696 | Msa1360460:intron | 30.0% | |
| TATTCATTAGAACAGAACCA+TGG | - | tig0017062:17697-17716 | None:intergenic | 30.0% | |
| !!! | TGTTTTTAAGTGAGGAAAGA+AGG | + | tig0017062:17906-17925 | Msa1360460:intron | 30.0% |
| AACTTCTAACTCTCAAGTAA+GGG | - | tig0017062:17944-17963 | None:intergenic | 30.0% | |
| TAACTTCTAACTCTCAAGTA+AGG | - | tig0017062:17945-17964 | None:intergenic | 30.0% | |
| ! | CTTTGACAATTTTTGTGGAA+TGG | - | tig0017062:18130-18149 | None:intergenic | 30.0% |
| TCAGTGGAAAATAATACCTT+CGG | + | tig0017062:18262-18281 | Msa1360460:intron | 30.0% | |
| TACACACAATATGACTTAGA+AGG | + | tig0017062:18290-18309 | Msa1360460:intron | 30.0% | |
| CTTTGACTCAAATGCTATTA+AGG | + | tig0017062:18610-18629 | Msa1360460:intron | 30.0% | |
| TACGATTAGTAAGAATATGC+TGG | + | tig0017062:18642-18661 | Msa1360460:intron | 30.0% | |
| ATAATATAGGTACATGGACA+AGG | + | tig0017062:18775-18794 | Msa1360460:intron | 30.0% | |
| TCCCTACCTTCTATAAAAAT+GGG | + | tig0017062:19040-19059 | Msa1360460:intron | 30.0% | |
| !! | ACCCATTTTTATAGAAGGTA+GGG | - | tig0017062:19044-19063 | None:intergenic | 30.0% |
| ! | AAGATCCGTGTAATGTTTTA+TGG | + | tig0017062:19095-19114 | Msa1360460:intron | 30.0% |
| ! | GATCAGTTTCTTTTCAATAG+TGG | + | tig0017062:19273-19292 | Msa1360460:intron | 30.0% |
| !! | CCAGAAAATTTTGATGATAG+GGG | - | tig0017062:19857-19876 | None:intergenic | 30.0% |
| ! | TAAACTAGGAAGTATGGATA+CGG | - | tig0017062:19892-19911 | None:intergenic | 30.0% |
| ATTCTCTAAACTAGGAAGTA+TGG | - | tig0017062:19898-19917 | None:intergenic | 30.0% | |
| TTCTTTGATATGATCCAACT+TGG | + | tig0017062:20272-20291 | Msa1360460:intron | 30.0% | |
| CTTGGAGATCATTAAAAATG+AGG | + | tig0017062:20290-20309 | Msa1360460:intron | 30.0% | |
| AAATTTGGGTACAAGTTGTA+CGG | - | tig0017062:20322-20341 | None:intergenic | 30.0% | |
| CTAAGAACTGTAAAAGATAG+AGG | + | tig0017062:20464-20483 | Msa1360460:intron | 30.0% | |
| ! | AAAGATAGAGGGTGTATAAT+AGG | + | tig0017062:20476-20495 | Msa1360460:intron | 30.0% |
| ! | AAGATAGAGGGTGTATAATA+GGG | + | tig0017062:20477-20496 | Msa1360460:intron | 30.0% |
| TATAATAGGGTGAACAAACA+GGG | + | tig0017062:20490-20509 | Msa1360460:intron | 30.0% | |
| TCAAATGTGACAGTTATTGA+GGG | + | tig0017062:21001-21020 | Msa1360460:intron | 30.0% | |
| GCTTAAAGCTTAATATGCTT+TGG | + | tig0017062:21075-21094 | Msa1360460:intron | 30.0% | |
| AACAAATGTTGTAGACGATA+TGG | + | tig0017062:21320-21339 | Msa1360460:CDS | 30.0% | |
| AAAATACAGCCTTGATTGAA+GGG | - | tig0017062:21418-21437 | None:intergenic | 30.0% | |
| AAAAATACAGCCTTGATTGA+AGG | - | tig0017062:21419-21438 | None:intergenic | 30.0% | |
| GTACAACTTTGTGTTTGTAA+TGG | + | tig0017062:21445-21464 | Msa1360460:intron | 30.0% | |
| !! | TTTGTAATGGTAGTGTTTTC+TGG | + | tig0017062:21458-21477 | Msa1360460:intron | 30.0% |
| ! | TGCGTTGTGTTCAATTTTTA+TGG | + | tig0017062:21555-21574 | Msa1360460:intron | 30.0% |
| TTTCTGTTCTTAAGGACTTT+GGG | - | tig0017062:21664-21683 | None:intergenic | 30.0% | |
| ATTTCTGTTCTTAAGGACTT+TGG | - | tig0017062:21665-21684 | None:intergenic | 30.0% | |
| AAAGTCCTTAAGAACAGAAA+TGG | + | tig0017062:21664-21683 | Msa1360460:intron | 30.0% | |
| !! | GAGCAGTTTTTATTTGTATG+AGG | + | tig0017062:21815-21834 | Msa1360460:intron | 30.0% |
| !! | GCAGTTTTTATTTGTATGAG+GGG | + | tig0017062:21817-21836 | Msa1360460:intron | 30.0% |
| AGTATTCAGCTGGAATAATA+AGG | + | tig0017062:21850-21869 | Msa1360460:intron | 30.0% | |
| AGAGTAAAATTCTCGTATCA+AGG | + | tig0017062:21926-21945 | Msa1360460:intron | 30.0% | |
| GAGTAAAATTCTCGTATCAA+GGG | + | tig0017062:21927-21946 | Msa1360460:intron | 30.0% | |
| ACTTCTATCTTCAAAACAAG+AGG | - | tig0017062:21964-21983 | None:intergenic | 30.0% | |
| ! | AGATAAAACAGCATAATGGA+AGG | - | tig0017062:22151-22170 | None:intergenic | 30.0% |
| GGAAAGATAAAACAGCATAA+TGG | - | tig0017062:22155-22174 | None:intergenic | 30.0% | |
| TAGAGAAAAGAAGAGAACTT+TGG | - | tig0017062:22176-22195 | None:intergenic | 30.0% | |
| !!! | GTTTAGAAGCAACCATTTTT+TGG | + | tig0017062:22301-22320 | Msa1360460:intron | 30.0% |
| AAATAACAAATCTCTCATCG+AGG | + | tig0017062:22516-22535 | Msa1360460:CDS | 30.0% | |
| ! | AAAATGTAGAAGCATGTGAA+TGG | + | tig0017062:22716-22735 | Msa1360460:CDS | 30.0% |
| TTTGTTAAATCATCTGGCTA+AGG | + | tig0017062:22830-22849 | Msa1360460:intron | 30.0% | |
| ! | GTACTCTGGAAAATTTGTAT+GGG | + | tig0017062:22951-22970 | Msa1360460:intron | 30.0% |
| GAGAAATTACTTTGCTAGTT+TGG | + | tig0017062:23084-23103 | Msa1360460:CDS | 30.0% | |
| ! | AAATTACTTTGCTAGTTTGG+TGG | + | tig0017062:23087-23106 | Msa1360460:CDS | 30.0% |
| ! | ATCAGATACTGTAGAAGTAT+CGG | - | tig0017062:23778-23797 | None:intergenic | 30.0% |
| ! | TTACGATGATGATGATGATT+TGG | + | tig0017062:24009-24028 | Msa1360460:CDS | 30.0% |
| ! | TACGATGATGATGATGATTT+GGG | + | tig0017062:24010-24029 | Msa1360460:CDS | 30.0% |
| ! | TGATGATGATTTGGGAATTA+TGG | + | tig0017062:24018-24037 | Msa1360460:CDS | 30.0% |
| TCAAACACTTCCTCTTTAAT+TGG | + | tig0017062:24153-24172 | Msa1360460:intron | 30.0% | |
| CAAACACTTCCTCTTTAATT+GGG | + | tig0017062:24154-24173 | Msa1360460:intron | 30.0% | |
| TATGTTTCACCCAATTAAAG+AGG | - | tig0017062:24166-24185 | None:intergenic | 30.0% | |
| GAAATGAGATCCAAATAAAG+TGG | - | tig0017062:24200-24219 | None:intergenic | 30.0% | |
| GATCATTACATAGAACAGAT+TGG | - | tig0017062:24403-24422 | None:intergenic | 30.0% | |
| CTGTTCTATGTAATGATCAT+AGG | + | tig0017062:24405-24424 | Msa1360460:intron | 30.0% | |
| AATGATCATAGGCATTCTTT+AGG | + | tig0017062:24416-24435 | Msa1360460:intron | 30.0% | |
| ACTATTGGACTATCATCTAT+TGG | - | tig0017062:24495-24514 | None:intergenic | 30.0% | |
| ACTATAACCTAAACCATTAC+AGG | + | tig0017062:24533-24552 | Msa1360460:intron | 30.0% | |
| TTAATCTCCTGTAATGGTTT+AGG | - | tig0017062:24543-24562 | None:intergenic | 30.0% | |
| ! | AACAACTAAAACCTTTTAGG+TGG | - | tig0017062:24621-24640 | None:intergenic | 30.0% |
| ! | TGCAACAACTAAAACCTTTT+AGG | - | tig0017062:24624-24643 | None:intergenic | 30.0% |
| TTCCTACAAAATGGAAGAAA+TGG | - | tig0017062:24692-24711 | None:intergenic | 30.0% | |
| !! | AGCTTTAAATGAATCACTTC+AGG | + | tig0017062:24731-24750 | Msa1360460:CDS | 30.0% |
| !! | TTTTAAAAGATGAGAGGGTT+TGG | + | tig0017062:24825-24844 | Msa1360460:intron | 30.0% |
| ! | GTAATTTCTTTTTCTTGTGG+GGG | + | tig0017062:24947-24966 | Msa1360460:intron | 30.0% |
| ! | TAATTTCTTTTTCTTGTGGG+GGG | + | tig0017062:24948-24967 | Msa1360460:intron | 30.0% |
| TGGAAGAAGTTACTTCATTA+AGG | + | tig0017062:24973-24992 | Msa1360460:intron | 30.0% | |
| GAAAATATTTAGAAGCCAAG+TGG | + | tig0017062:25055-25074 | Msa1360460:intron | 30.0% | |
| GATATACAAAATATGGACAG+AGG | + | tig0017062:25212-25231 | Msa1360460:intron | 30.0% | |
| ACTAAGAACATAAACTACCA+TGG | + | tig0017062:25323-25342 | Msa1360460:intron | 30.0% | |
| ATAAACTACCATGGTAAAGA+GGG | + | tig0017062:25332-25351 | Msa1360460:intron | 30.0% | |
| CACTAATTTATCCTGGATTT+GGG | - | tig0017062:25420-25439 | None:intergenic | 30.0% | |
| TCACTAATTTATCCTGGATT+TGG | - | tig0017062:25421-25440 | None:intergenic | 30.0% | |
| ATCCAGGATAAATTAGTGAA+TGG | + | tig0017062:25422-25441 | Msa1360460:intron | 30.0% | |
| ATCCATTCACTAATTTATCC+TGG | - | tig0017062:25427-25446 | None:intergenic | 30.0% | |
| AAATTGATACCATCACTAAG+GGG | - | tig0017062:25471-25490 | None:intergenic | 30.0% | |
| GAAATTGATACCATCACTAA+GGG | - | tig0017062:25472-25491 | None:intergenic | 30.0% | |
| TGAAATTGATACCATCACTA+AGG | - | tig0017062:25473-25492 | None:intergenic | 30.0% | |
| TCTAATAGAAACTAGATGCT+AGG | + | tig0017062:25616-25635 | Msa1360460:intron | 30.0% | |
| CAATATTTATAACTAAGCCC+AGG | + | tig0017062:25663-25682 | Msa1360460:intron | 30.0% | |
| ATGATATCTTCATAAACTGC+AGG | + | tig0017062:25753-25772 | Msa1360460:intron | 30.0% | |
| !! | CATCTTTTAGCTGTAAAATC+TGG | - | tig0017062:25799-25818 | None:intergenic | 30.0% |
| ATAACAGAACGATATCTTTC+TGG | + | tig0017062:25904-25923 | Msa1360460:CDS | 30.0% | |
| GATAAGATGATCTTCTGCTT+AGG | - | tig0017062:15190-15209 | None:intergenic | 35.0% | |
| ! | CTTCTGATCAAAAGCATATC+CGG | - | tig0017062:15502-15521 | None:intergenic | 35.0% |
| TTTCTTAGGTGAATCAGCAT+AGG | - | tig0017062:15590-15609 | None:intergenic | 35.0% | |
| GTGGAACCAAACATACATTT+AGG | - | tig0017062:15876-15895 | None:intergenic | 35.0% | |
| AAATATGGTTTCTCCAAACG+TGG | - | tig0017062:15895-15914 | None:intergenic | 35.0% | |
| AAATTCATCCCTGACTTTGT+CGG | + | tig0017062:15987-16006 | Msa1360460:intron | 35.0% | |
| TTTAGTCTCTAGCATACTCT+CGG | - | tig0017062:16094-16113 | None:intergenic | 35.0% | |
| CACAGTAAGTGGTTAAGTAT+AGG | + | tig0017062:16183-16202 | Msa1360460:intron | 35.0% | |
| !! | GTTGGATCTTGAACTGATTT+TGG | + | tig0017062:16366-16385 | Msa1360460:intron | 35.0% |
| !!! | CGAGTTTTGAAGTATTCTAC+GGG | + | tig0017062:16866-16885 | Msa1360460:CDS | 35.0% |
| ! | CTTGATTTTGTAGTTTCCGT+GGG | + | tig0017062:16942-16961 | Msa1360460:intron | 35.0% |
| AGATCATAAGATGAAACCCA+CGG | - | tig0017062:16961-16980 | None:intergenic | 35.0% | |
| !!! | CTTAGCTTGTATAGTTTTGC+AGG | - | tig0017062:17119-17138 | None:intergenic | 35.0% |
| CTGCAAAACTATACAAGCTA+AGG | + | tig0017062:17117-17136 | Msa1360460:CDS | 35.0% | |
| !! | GTTTTAACAAACGATCCTAG+TGG | + | tig0017062:17158-17177 | Msa1360460:CDS | 35.0% |
| TACACAATGTTCTCAGTTTC+TGG | + | tig0017062:17235-17254 | Msa1360460:intron | 35.0% | |
| AAGAAACGACCATCAAAGTA+GGG | - | tig0017062:17289-17308 | None:intergenic | 35.0% | |
| TAAGAAACGACCATCAAAGT+AGG | - | tig0017062:17290-17309 | None:intergenic | 35.0% | |
| CAAGAAGCAAATGATTAGGA+AGG | - | tig0017062:17316-17335 | None:intergenic | 35.0% | |
| GATGAATGCATATGTCTTGT+AGG | + | tig0017062:17340-17359 | Msa1360460:intron | 35.0% | |
| !! | GACCATCTCTAAAGATGTTT+TGG | + | tig0017062:17562-17581 | Msa1360460:CDS | 35.0% |
| ! | ACCCAAAACATCTTTAGAGA+TGG | - | tig0017062:17567-17586 | None:intergenic | 35.0% |
| !! | TGTTCGGAAATTTTGAGTAG+AGG | + | tig0017062:17834-17853 | Msa1360460:intron | 35.0% |
| !! | GTTCGGAAATTTTGAGTAGA+GGG | + | tig0017062:17835-17854 | Msa1360460:intron | 35.0% |
| TTTGAATGGGAGATAAGAAG+GGG | - | tig0017062:18013-18032 | None:intergenic | 35.0% | |
| GTTTGAATGGGAGATAAGAA+GGG | - | tig0017062:18014-18033 | None:intergenic | 35.0% | |
| TGTTTGAATGGGAGATAAGA+AGG | - | tig0017062:18015-18034 | None:intergenic | 35.0% | |
| GAAGTTCAAAATGAGAGAGA+CGG | - | tig0017062:18074-18093 | None:intergenic | 35.0% | |
| ! | CATTTTGAACTTCACATCAG+TGG | + | tig0017062:18081-18100 | Msa1360460:intron | 35.0% |
| ! | GACAATTTTTGTGGAATGGA+GGG | - | tig0017062:18126-18145 | None:intergenic | 35.0% |
| ! | TGACAATTTTTGTGGAATGG+AGG | - | tig0017062:18127-18146 | None:intergenic | 35.0% |
| TCGATATCATAAATGCTCAG+TGG | + | tig0017062:18246-18265 | Msa1360460:intron | 35.0% | |
| ! | ATTACTCTGAGTTGAAACAG+GGG | - | tig0017062:18459-18478 | None:intergenic | 35.0% |
| ! | CATTACTCTGAGTTGAAACA+GGG | - | tig0017062:18460-18479 | None:intergenic | 35.0% |
| ! | ACATTACTCTGAGTTGAAAC+AGG | - | tig0017062:18461-18480 | None:intergenic | 35.0% |
| ACTCAGAGTAATGTGAAAGA+TGG | + | tig0017062:18467-18486 | Msa1360460:CDS | 35.0% | |
| CATGAATATGTGCCCAATAA+GGG | - | tig0017062:18831-18850 | None:intergenic | 35.0% | |
| ACATGAATATGTGCCCAATA+AGG | - | tig0017062:18832-18851 | None:intergenic | 35.0% | |
| TATTGGGCACATATTCATGT+AGG | + | tig0017062:18832-18851 | Msa1360460:intron | 35.0% | |
| TATTCATGTAGGACACTTAC+AGG | + | tig0017062:18843-18862 | Msa1360460:intron | 35.0% | |
| ATTCATGTAGGACACTTACA+GGG | + | tig0017062:18844-18863 | Msa1360460:intron | 35.0% | |
| GTCCCTACCTTCTATAAAAA+TGG | + | tig0017062:19039-19058 | Msa1360460:intron | 35.0% | |
| !! | CACCCATTTTTATAGAAGGT+AGG | - | tig0017062:19045-19064 | None:intergenic | 35.0% |
| CTACCTTCTATAAAAATGGG+TGG | + | tig0017062:19043-19062 | Msa1360460:intron | 35.0% | |
| !! | TGACCACCCATTTTTATAGA+AGG | - | tig0017062:19049-19068 | None:intergenic | 35.0% |
| GACATGCTATCACCTAATTA+AGG | - | tig0017062:19195-19214 | None:intergenic | 35.0% | |
| TAAAGATGGATCTATGTACC+AGG | + | tig0017062:19567-19586 | Msa1360460:intron | 35.0% | |
| ! | CCCCTATCATCAAAATTTTC+TGG | + | tig0017062:19854-19873 | Msa1360460:intron | 35.0% |
| ! | AAATTTTCTGGATTCATCCC+TGG | + | tig0017062:19866-19885 | Msa1360460:intron | 35.0% |
| ACAGAAAATGCTGAACGTAA+TGG | + | tig0017062:19928-19947 | Msa1360460:intron | 35.0% | |
| ! | TAAAGGCTCGCTTTCTAAAA+TGG | - | tig0017062:20161-20180 | None:intergenic | 35.0% |
| AAGCGAGCCTTTAATAAATG+AGG | + | tig0017062:20168-20187 | Msa1360460:CDS | 35.0% | |
| TTCAAGATGAAAAGAATCCG+TGG | + | tig0017062:20409-20428 | Msa1360460:intron | 35.0% | |
| !! | TCTAGCTTTAGTTTGATCCA+CGG | - | tig0017062:20429-20448 | None:intergenic | 35.0% |
| GTATAATAGGGTGAACAAAC+AGG | + | tig0017062:20489-20508 | Msa1360460:intron | 35.0% | |
| TGGTTTATTGGACGAAATGT+TGG | + | tig0017062:20648-20667 | Msa1360460:intron | 35.0% | |
| TTATTGGACGAAATGTTGGA+TGG | + | tig0017062:20652-20671 | Msa1360460:intron | 35.0% | |
| GCAAATGCGACAATTATCAT+GGG | - | tig0017062:20743-20762 | None:intergenic | 35.0% | |
| TGCAAATGCGACAATTATCA+TGG | - | tig0017062:20744-20763 | None:intergenic | 35.0% | |
| GACAAATGGAAGAAAGAGAA+TGG | - | tig0017062:20955-20974 | None:intergenic | 35.0% | |
| GTCAAATGTGACAGTTATTG+AGG | + | tig0017062:21000-21019 | Msa1360460:intron | 35.0% | |
| TTGTAGACGATATGGATGAA+TGG | + | tig0017062:21328-21347 | Msa1360460:CDS | 35.0% | |
| GCACATTCAATGTTAAACTC+CGG | + | tig0017062:21355-21374 | Msa1360460:CDS | 35.0% | |
| !!! | TCAAGGCTGTATTTTTTCCT+TGG | + | tig0017062:21423-21442 | Msa1360460:intron | 35.0% |
| ACAAACACAAAGTTGTACCA+AGG | - | tig0017062:21443-21462 | None:intergenic | 35.0% | |
| GGAATAGCTACACATTTGTT+TGG | + | tig0017062:21479-21498 | Msa1360460:intron | 35.0% | |
| GTTTCTTTGTTCCTTTGTTC+AGG | + | tig0017062:21501-21520 | Msa1360460:intron | 35.0% | |
| AGCATCAATAGAAATGAGGT+TGG | - | tig0017062:21582-21601 | None:intergenic | 35.0% | |
| ! | TCCTGATATTTCTGTTTGCT+TGG | + | tig0017062:21705-21724 | Msa1360460:intron | 35.0% |
| TCCAAGCAAACAGAAATATC+AGG | - | tig0017062:21709-21728 | None:intergenic | 35.0% | |
| CTGAAAGAAAGAATCTCTAG+TGG | + | tig0017062:21768-21787 | Msa1360460:intron | 35.0% | |
| ! | AAAGAATCTCTAGTGGATCT+TGG | + | tig0017062:21775-21794 | Msa1360460:intron | 35.0% |
| ! | AAGAATCTCTAGTGGATCTT+GGG | + | tig0017062:21776-21795 | Msa1360460:intron | 35.0% |
| TTATTTGTATGAGGGGTTAG+CGG | + | tig0017062:21824-21843 | Msa1360460:intron | 35.0% | |
| ACATCATCTCTTATCCTCTT+TGG | + | tig0017062:21990-22009 | Msa1360460:intron | 35.0% | |
| ! | TAAAACAGCATAATGGAAGG+TGG | - | tig0017062:22148-22167 | None:intergenic | 35.0% |
| TTACAGAAGCAAACAAAGCT+AGG | - | tig0017062:22370-22389 | None:intergenic | 35.0% | |
| TGTTATTACGGGTTTCTATC+TGG | - | tig0017062:22477-22496 | None:intergenic | 35.0% | |
| CATTTGCAAGCTGTTATTAC+GGG | - | tig0017062:22488-22507 | None:intergenic | 35.0% | |
| GCATTTGCAAGCTGTTATTA+CGG | - | tig0017062:22489-22508 | None:intergenic | 35.0% | |
| TAACAGCTTGCAAATGCAAT+CGG | + | tig0017062:22492-22511 | Msa1360460:CDS | 35.0% | |
| GAGGTTCATTTGATGAAGAT+CGG | + | tig0017062:22686-22705 | Msa1360460:CDS | 35.0% | |
| ! | GGTACTCTGGAAAATTTGTA+TGG | + | tig0017062:22950-22969 | Msa1360460:intron | 35.0% |
| ATATAATGTAACTGACCTCC+CGG | - | tig0017062:23480-23499 | None:intergenic | 35.0% | |
| ACCTTATTACATGTGAGTTC+TGG | + | tig0017062:23581-23600 | Msa1360460:intron | 35.0% | |
| CCTTATTACATGTGAGTTCT+GGG | + | tig0017062:23582-23601 | Msa1360460:intron | 35.0% | |
| ! | TAGATGCTTTTGTACTAGCA+CGG | - | tig0017062:23701-23720 | None:intergenic | 35.0% |
| CATCTAGAAATCCAACTGTT+TGG | + | tig0017062:23715-23734 | Msa1360460:CDS | 35.0% | |
| ! | CACAATTTTTATCCCACTTC+TGG | + | tig0017062:23815-23834 | Msa1360460:CDS | 35.0% |
| ! | AATTTTTATCCCACTTCTGG+TGG | + | tig0017062:23818-23837 | Msa1360460:CDS | 35.0% |
| GATGAGAATGACAGTAAATC+TGG | + | tig0017062:24046-24065 | Msa1360460:CDS | 35.0% | |
| AGCCGCTATTTGAAAAAAGT+CGG | - | tig0017062:24081-24100 | None:intergenic | 35.0% | |
| TGAGATCCAAATAAAGTGGT+GGG | - | tig0017062:24196-24215 | None:intergenic | 35.0% | |
| ATGAGATCCAAATAAAGTGG+TGG | - | tig0017062:24197-24216 | None:intergenic | 35.0% | |
| AATGCCATAAACAGTCAACA+AGG | + | tig0017062:24342-24361 | Msa1360460:intron | 35.0% | |
| !! | AAAGCCTTGTTGACTGTTTA+TGG | - | tig0017062:24349-24368 | None:intergenic | 35.0% |
| CATTACATAGAACAGATTGG+AGG | - | tig0017062:24400-24419 | None:intergenic | 35.0% | |
| GATGATAGTCCAATAGTTAG+AGG | + | tig0017062:24498-24517 | Msa1360460:intron | 35.0% | |
| CTTCTTCTACCTCTAACTAT+TGG | - | tig0017062:24510-24529 | None:intergenic | 35.0% | |
| CACTGTTTAATCTCCTGTAA+TGG | - | tig0017062:24549-24568 | None:intergenic | 35.0% | |
| CATTACAGGAGATTAAACAG+TGG | + | tig0017062:24547-24566 | Msa1360460:intron | 35.0% | |
| ACTGTACGTATTGGATCAAA+TGG | - | tig0017062:24593-24612 | None:intergenic | 35.0% | |
| ! | GACCATTTCTTCCATTTTGT+AGG | + | tig0017062:24687-24706 | Msa1360460:intron | 35.0% |
| TGAATCACTTCAGGATTTAC+TGG | + | tig0017062:24740-24759 | Msa1360460:CDS | 35.0% | |
| AGGAAGAAAAGACACACATA+CGG | + | tig0017062:24993-25012 | Msa1360460:intron | 35.0% | |
| TTACTCTGCTTTCACTACTT+TGG | - | tig0017062:25108-25127 | None:intergenic | 35.0% | |
| CAGAGTAAATCTCTGATTGT+TGG | + | tig0017062:25120-25139 | Msa1360460:intron | 35.0% | |
| !!! | TTTTGGGATTAAGACTGACA+AGG | - | tig0017062:25172-25191 | None:intergenic | 35.0% |
| TCATAATGAACTGGTTAAGG+GGG | - | tig0017062:25283-25302 | None:intergenic | 35.0% | |
| CTCATAATGAACTGGTTAAG+GGG | - | tig0017062:25284-25303 | None:intergenic | 35.0% | |
| GCTCATAATGAACTGGTTAA+GGG | - | tig0017062:25285-25304 | None:intergenic | 35.0% | |
| TGCTCATAATGAACTGGTTA+AGG | - | tig0017062:25286-25305 | None:intergenic | 35.0% | |
| CATAAACTACCATGGTAAAG+AGG | + | tig0017062:25331-25350 | Msa1360460:intron | 35.0% | |
| TTCATGTATTTGCACACTTC+TGG | + | tig0017062:25489-25508 | Msa1360460:intron | 35.0% | |
| TTATGTCGCAACTTTGTAGA+GGG | + | tig0017062:25512-25531 | Msa1360460:intron | 35.0% | |
| CAAAAAGACATAGGATAGCA+AGG | + | tig0017062:25566-25585 | Msa1360460:intron | 35.0% | |
| !! | CAATAATGTTGGCCTTTGAA+AGG | - | tig0017062:25689-25708 | None:intergenic | 35.0% |
| CTTTCAAAGGCCAACATTAT+TGG | + | tig0017062:25687-25706 | Msa1360460:intron | 35.0% | |
| ATCGGAGAAACAACAAACTC+CGG | + | tig0017062:15097-15116 | Msa1360460:five_prime_UTR | 40.0% | |
| ATCCGTGTTTCCAAAAGTCA+CGG | + | tig0017062:15211-15230 | Msa1360460:CDS | 40.0% | |
| CATATGACGACTAGAAAGCT+TGG | - | tig0017062:15254-15273 | None:intergenic | 40.0% | |
| ! | CAAGCTTTCTAGTCGTCATA+TGG | + | tig0017062:15252-15271 | Msa1360460:CDS | 40.0% |
| TCGTCATATGGCTAAACCTA+GGG | + | tig0017062:15264-15283 | Msa1360460:CDS | 40.0% | |
| TTATTACATGTGTCGGACAC+CGG | + | tig0017062:15480-15499 | Msa1360460:intron | 40.0% | |
| ! | TGTATGTTTGGTTCCACGTT+TGG | + | tig0017062:15879-15898 | Msa1360460:intron | 40.0% |
| GACAAAGTCAGGGATGAATT+TGG | - | tig0017062:15988-16007 | None:intergenic | 40.0% | |
| AATTCATCCCTGACTTTGTC+GGG | + | tig0017062:15988-16007 | Msa1360460:intron | 40.0% | |
| GATCTGATTGACACAGTAAG+TGG | + | tig0017062:16172-16191 | Msa1360460:intron | 40.0% | |
| !!! | GTTTTGAAGTATTCTACGGG+AGG | + | tig0017062:16869-16888 | Msa1360460:CDS | 40.0% |
| ! | GCTTGATTTTGTAGTTTCCG+TGG | + | tig0017062:16941-16960 | Msa1360460:intron | 40.0% |
| TCACTAGCTACTCTAAGCAT+TGG | - | tig0017062:17003-17022 | None:intergenic | 40.0% | |
| AGTGTAAATGTACACCCACT+AGG | - | tig0017062:17176-17195 | None:intergenic | 40.0% | |
| ! | TAGTGGGTGTACATTTACAC+TGG | + | tig0017062:17175-17194 | Msa1360460:CDS | 40.0% |
| TAACCTTAGAAGCCAAAGTG+TGG | + | tig0017062:17370-17389 | Msa1360460:CDS | 40.0% | |
| ATATTTCGCATCGTCCATTG+CGG | - | tig0017062:17401-17420 | None:intergenic | 40.0% | |
| ! | CGATGCGAAATATTGATGAC+AGG | + | tig0017062:17408-17427 | Msa1360460:CDS | 40.0% |
| ! | TGATGACAGGTATTGTTGAG+AGG | + | tig0017062:17421-17440 | Msa1360460:intron | 40.0% |
| AGATGGTCAAGATGCAAAGA+AGG | - | tig0017062:17550-17569 | None:intergenic | 40.0% | |
| ACATCTATACCAACGACCTT+AGG | - | tig0017062:17596-17615 | None:intergenic | 40.0% | |
| TGGTATAGATGTTGTGGAGT+TGG | + | tig0017062:17604-17623 | Msa1360460:CDS | 40.0% | |
| ATAAGACTGTGACACTCCAA+AGG | - | tig0017062:17766-17785 | None:intergenic | 40.0% | |
| AAGAGAGATAACAGGATGGA+AGG | + | tig0017062:17858-17877 | Msa1360460:intron | 40.0% | |
| AGAGAGATAACAGGATGGAA+GGG | + | tig0017062:17859-17878 | Msa1360460:intron | 40.0% | |
| TTGAATGGGAGATAAGAAGG+GGG | - | tig0017062:18012-18031 | None:intergenic | 40.0% | |
| CATCAGTGGTTAAATGCCAT+TGG | + | tig0017062:18095-18114 | Msa1360460:intron | 40.0% | |
| TATTGTGTGTATCACTCCGA+AGG | - | tig0017062:18281-18300 | None:intergenic | 40.0% | |
| CAGAGTAATGTGAAAGATGG+TGG | + | tig0017062:18470-18489 | Msa1360460:CDS | 40.0% | |
| CCTGTGTCCCTAGAATTTAA+AGG | - | tig0017062:18711-18730 | None:intergenic | 40.0% | |
| ! | CCTTTAAATTCTAGGGACAC+AGG | + | tig0017062:18708-18727 | Msa1360460:intron | 40.0% |
| TTCATGTAGGACACTTACAG+GGG | + | tig0017062:18845-18864 | Msa1360460:intron | 40.0% | |
| GGCGGATGATAATTATGACA+GGG | + | tig0017062:18866-18885 | Msa1360460:intron | 40.0% | |
| GCGGATGATAATTATGACAG+GGG | + | tig0017062:18867-18886 | Msa1360460:intron | 40.0% | |
| CGGATGATAATTATGACAGG+GGG | + | tig0017062:18868-18887 | Msa1360460:intron | 40.0% | |
| AGATATGAGCACGACACAAA+GGG | - | tig0017062:19548-19567 | None:intergenic | 40.0% | |
| TAGATATGAGCACGACACAA+AGG | - | tig0017062:19549-19568 | None:intergenic | 40.0% | |
| GTCGTGCTCATATCTAAAGA+TGG | + | tig0017062:19553-19572 | Msa1360460:intron | 40.0% | |
| ! | TGCCGTAAAGTTTTCTTGTG+GGG | - | tig0017062:19609-19628 | None:intergenic | 40.0% |
| ! | GTGCCGTAAAGTTTTCTTGT+GGG | - | tig0017062:19610-19629 | None:intergenic | 40.0% |
| TCTAATGTGCAGGTATGTCA+TGG | + | tig0017062:20060-20079 | Msa1360460:intron | 40.0% | |
| CTAATGTGCAGGTATGTCAT+GGG | + | tig0017062:20061-20080 | Msa1360460:intron | 40.0% | |
| GACAATTATCATGGGACAGA+GGG | - | tig0017062:20735-20754 | None:intergenic | 40.0% | |
| TGACAGTTATTGAGGGACAA+AGG | + | tig0017062:21008-21027 | Msa1360460:intron | 40.0% | |
| GACAGTTATTGAGGGACAAA+GGG | + | tig0017062:21009-21028 | Msa1360460:intron | 40.0% | |
| !! | GCTTAATATGCTTTGGCTTG+AGG | + | tig0017062:21082-21101 | Msa1360460:intron | 40.0% |
| !! | TAATATGCTTTGGCTTGAGG+AGG | + | tig0017062:21085-21104 | Msa1360460:intron | 40.0% |
| !! | AATATGCTTTGGCTTGAGGA+GGG | + | tig0017062:21086-21105 | Msa1360460:intron | 40.0% |
| GACGATATGGATGAATGGTT+AGG | + | tig0017062:21333-21352 | Msa1360460:CDS | 40.0% | |
| CATGAGAGAGGATATAGCAT+CGG | + | tig0017062:21380-21399 | Msa1360460:CDS | 40.0% | |
| !! | AGAGGATATAGCATCGGTAA+GGG | + | tig0017062:21386-21405 | Msa1360460:intron | 40.0% |
| TTTGTTCCTTTGTTCAGGCA+AGG | + | tig0017062:21506-21525 | Msa1360460:intron | 40.0% | |
| GGGTAGCATCAATAGAAATG+AGG | - | tig0017062:21586-21605 | None:intergenic | 40.0% | |
| CTTGGGTACACTGCTTAATT+TGG | + | tig0017062:21793-21812 | Msa1360460:intron | 40.0% | |
| !! | TTAGCGGAAAAGTATTCAGC+TGG | + | tig0017062:21840-21859 | Msa1360460:intron | 40.0% |
| TATACCAAAATGCCCTGATG+AGG | - | tig0017062:22030-22049 | None:intergenic | 40.0% | |
| !! | AGGGCATTTTGGTATAGAGA+GGG | + | tig0017062:22034-22053 | Msa1360460:intron | 40.0% |
| TTTGGTATAGAGAGGGATTG+TGG | + | tig0017062:22041-22060 | Msa1360460:intron | 40.0% | |
| TTGGTATAGAGAGGGATTGT+GGG | + | tig0017062:22042-22061 | Msa1360460:intron | 40.0% | |
| ! | TCTGGTGTGTGAATTAGTCT+TGG | + | tig0017062:22104-22123 | Msa1360460:intron | 40.0% |
| !! | CTGGTGTGTGAATTAGTCTT+GGG | + | tig0017062:22105-22124 | Msa1360460:intron | 40.0% |
| !! | TGGTGTGTGAATTAGTCTTG+GGG | + | tig0017062:22106-22125 | Msa1360460:intron | 40.0% |
| !!! | AAGCAACCATTTTTTGGTGC+TGG | + | tig0017062:22307-22326 | Msa1360460:intron | 40.0% |
| !!! | AGCAACCATTTTTTGGTGCT+GGG | + | tig0017062:22308-22327 | Msa1360460:intron | 40.0% |
| AGCTTGATAAGCTTCTTGAG+CGG | + | tig0017062:22539-22558 | Msa1360460:CDS | 40.0% | |
| TTTAGCTGGATGAACTTACC+TGG | + | tig0017062:22610-22629 | Msa1360460:intron | 40.0% | |
| ! | TAGTTTGCAACGTGTTTGAC+AGG | + | tig0017062:22664-22683 | Msa1360460:intron | 40.0% |
| GCATAAGTGGGGTCAATATT+GGG | - | tig0017062:22772-22791 | None:intergenic | 40.0% | |
| TGCATAAGTGGGGTCAATAT+TGG | - | tig0017062:22773-22792 | None:intergenic | 40.0% | |
| TGTCTGCTTACTCTAAACAG+CGG | + | tig0017062:23214-23233 | Msa1360460:intron | 40.0% | |
| ACGTCTTCTTCAGCATTTGA+AGG | + | tig0017062:23293-23312 | Msa1360460:CDS | 40.0% | |
| ! | TTCCTGCATGCGTATGTTTT+TGG | + | tig0017062:23337-23356 | Msa1360460:intron | 40.0% |
| AGCCTTGACAAGAATTGCTT+GGG | + | tig0017062:23409-23428 | Msa1360460:CDS | 40.0% | |
| ! | CTGCAATAAGCTTTTCTCAG+TGG | - | tig0017062:23436-23455 | None:intergenic | 40.0% |
| CCCAGAACTCACATGTAATA+AGG | - | tig0017062:23585-23604 | None:intergenic | 40.0% | |
| !! | AATCCAACTGTTTGGCTTGA+AGG | + | tig0017062:23723-23742 | Msa1360460:CDS | 40.0% |
| !!! | GCCCGACTTTTTTCAAATAG+CGG | + | tig0017062:24076-24095 | Msa1360460:intron | 40.0% |
| GCCGCTATTTGAAAAAAGTC+GGG | - | tig0017062:24080-24099 | None:intergenic | 40.0% | |
| TGGATCTCATTTCCAATGTG+TGG | + | tig0017062:24207-24226 | Msa1360460:intron | 40.0% | |
| GGATCTCATTTCCAATGTGT+GGG | + | tig0017062:24208-24227 | Msa1360460:intron | 40.0% | |
| ! | CAGTCAACAAGGCTTTAGTT+TGG | + | tig0017062:24353-24372 | Msa1360460:intron | 40.0% |
| GATCATAGGCATTCTTTAGG+TGG | + | tig0017062:24419-24438 | Msa1360460:intron | 40.0% | |
| !! | CACCTATAGAAGCACTGTTA+AGG | + | tig0017062:24461-24480 | Msa1360460:intron | 40.0% |
| CTCCTTAACAGTGCTTCTAT+AGG | - | tig0017062:24466-24485 | None:intergenic | 40.0% | |
| !! | CTATAGAAGCACTGTTAAGG+AGG | + | tig0017062:24464-24483 | Msa1360460:intron | 40.0% |
| ! | TACAGTTGACTCCACCTAAA+AGG | + | tig0017062:24607-24626 | Msa1360460:intron | 40.0% |
| TCACTTCAGGATTTACTGGA+CGG | + | tig0017062:24744-24763 | Msa1360460:CDS | 40.0% | |
| ! | AGATGAGAGGGTTTGGATTT+TGG | + | tig0017062:24832-24851 | Msa1360460:intron | 40.0% |
| AAGACTGACAAGGCTAAAAG+TGG | - | tig0017062:25162-25181 | None:intergenic | 40.0% | |
| GAATGACTTCTTGGAACCAA+AGG | - | tig0017062:25241-25260 | None:intergenic | 40.0% | |
| ! | GGTTGATGTGAATGACTTCT+TGG | - | tig0017062:25250-25269 | None:intergenic | 40.0% |
| AGTAGCTGCTCATAATGAAC+TGG | - | tig0017062:25292-25311 | None:intergenic | 40.0% | |
| AGTTTATGTTCTTAGTCGCC+CGG | - | tig0017062:25319-25338 | None:intergenic | 40.0% | |
| GTACACTTGGGTATCATTAC+AGG | - | tig0017062:25398-25417 | None:intergenic | 40.0% | |
| GTTATGTCGCAACTTTGTAG+AGG | + | tig0017062:25511-25530 | Msa1360460:intron | 40.0% | |
| ! | ACTTTTATGCTGTCGTGGAT+TGG | + | tig0017062:25839-25858 | Msa1360460:CDS | 40.0% |
| ! | CTTTTATGCTGTCGTGGATT+GGG | + | tig0017062:25840-25859 | Msa1360460:CDS | 40.0% |
| ! | TGCATTGATATGCAGCGTAA+AGG | - | tig0017062:25880-25899 | None:intergenic | 40.0% |
| TTACGCTGCATATCAATGCA+TGG | + | tig0017062:25880-25899 | Msa1360460:CDS | 40.0% | |
| ! | GGATTTGTACGTCTTTTGCT+TGG | + | tig0017062:25946-25965 | Msa1360460:CDS | 40.0% |
| TGTAGGATAGAACACCCATT+TGG | - | tig0017062:26156-26175 | None:intergenic | 40.0% | |
| AACAACAAACTCCGGCGAAA+TGG | + | tig0017062:15105-15124 | Msa1360460:exon | 45.0% | |
| !! | TGCCGTGACTTTTGGAAACA+CGG | - | tig0017062:15216-15235 | None:intergenic | 45.0% |
| TCCAAAAGTCACGGCATCTT+AGG | + | tig0017062:15220-15239 | Msa1360460:CDS | 45.0% | |
| ! | TCCTAAGATGCCGTGACTTT+TGG | - | tig0017062:15224-15243 | None:intergenic | 45.0% |
| GTCGTCATATGGCTAAACCT+AGG | + | tig0017062:15263-15282 | Msa1360460:CDS | 45.0% | |
| !!! | GCGTCTTACAGCTTTTTTCG+TGG | - | tig0017062:16657-16676 | None:intergenic | 45.0% |
| ! | TTGGATCTTAAGAGCGTGGT+AGG | - | tig0017062:16984-17003 | None:intergenic | 45.0% |
| ! | AGCATTGGATCTTAAGAGCG+TGG | - | tig0017062:16988-17007 | None:intergenic | 45.0% |
| GCAACCATTCCCTACTTTGA+TGG | + | tig0017062:17277-17296 | Msa1360460:intron | 45.0% | |
| ACGACCATCAAAGTAGGGAA+TGG | - | tig0017062:17284-17303 | None:intergenic | 45.0% | |
| ! | TAGTGGTTGAGTTGTACGTG+AGG | + | tig0017062:17469-17488 | Msa1360460:intron | 45.0% |
| ! | AGTGGTTGAGTTGTACGTGA+GGG | + | tig0017062:17470-17489 | Msa1360460:intron | 45.0% |
| CTATACCAACGACCTTAGGA+AGG | - | tig0017062:17592-17611 | None:intergenic | 45.0% | |
| GGTCGTTGGTATAGATGTTG+TGG | + | tig0017062:17598-17617 | Msa1360460:CDS | 45.0% | |
| ! | ATGTTGTGGAGTTGGCTCTT+TGG | + | tig0017062:17612-17631 | Msa1360460:CDS | 45.0% |
| ! | TGTTGTGGAGTTGGCTCTTT+GGG | + | tig0017062:17613-17632 | Msa1360460:CDS | 45.0% |
| CTTACTATGCGTGGAACCTT+TGG | + | tig0017062:17747-17766 | Msa1360460:intron | 45.0% | |
| GTAGAGGGAAGAGAGATAAC+AGG | + | tig0017062:17850-17869 | Msa1360460:intron | 45.0% | |
| AGGGAAGAGAGATAACAGGA+TGG | + | tig0017062:17854-17873 | Msa1360460:intron | 45.0% | |
| GAGAGATAACAGGATGGAAG+GGG | + | tig0017062:17860-17879 | Msa1360460:intron | 45.0% | |
| AGAGATAACAGGATGGAAGG+GGG | + | tig0017062:17861-17880 | Msa1360460:intron | 45.0% | |
| CAACTCTCTCTCAGTCATAG+CGG | - | tig0017062:18507-18526 | None:intergenic | 45.0% | |
| TGAAAAAGACCTTGTCTCCC+AGG | + | tig0017062:18538-18557 | Msa1360460:CDS | 45.0% | |
| GGGCGGATGATAATTATGAC+AGG | + | tig0017062:18865-18884 | Msa1360460:intron | 45.0% | |
| GATCTATGTACCAGGCAGTA+GGG | + | tig0017062:19575-19594 | Msa1360460:intron | 45.0% | |
| GCCCCCACAAGAAAACTTTA+CGG | + | tig0017062:19604-19623 | Msa1360460:intron | 45.0% | |
| ! | GCCGTAAAGTTTTCTTGTGG+GGG | - | tig0017062:19608-19627 | None:intergenic | 45.0% |
| !! | GGTGCCGTAAAGTTTTCTTG+TGG | - | tig0017062:19611-19630 | None:intergenic | 45.0% |
| CGACAATTATCATGGGACAG+AGG | - | tig0017062:20736-20755 | None:intergenic | 45.0% | |
| CATACTAAGTTGTGTGTCGC+AGG | + | tig0017062:21275-21294 | Msa1360460:intron | 45.0% | |
| CTATATCCTCTCTCATGTGC+CGG | - | tig0017062:21377-21396 | None:intergenic | 45.0% | |
| !! | GAGAGGATATAGCATCGGTA+AGG | + | tig0017062:21385-21404 | Msa1360460:intron | 45.0% |
| ! | CCTTTTCCTTGCCTGAACAA+AGG | - | tig0017062:21515-21534 | None:intergenic | 45.0% |
| CCTTTGTTCAGGCAAGGAAA+AGG | + | tig0017062:21512-21531 | Msa1360460:intron | 45.0% | |
| CCACAAGACAAACTCCAAAG+AGG | - | tig0017062:22007-22026 | None:intergenic | 45.0% | |
| !! | CCTCTTTGGAGTTTGTCTTG+TGG | + | tig0017062:22004-22023 | Msa1360460:intron | 45.0% |
| TTTGTCTTGTGGCCTCATCA+GGG | + | tig0017062:22015-22034 | Msa1360460:intron | 45.0% | |
| !! | CAGGGCATTTTGGTATAGAG+AGG | + | tig0017062:22033-22052 | Msa1360460:intron | 45.0% |
| AATTCACACACCAGAGAGAG+AGG | - | tig0017062:22099-22118 | None:intergenic | 45.0% | |
| !!! | CATTTTTTGGTGCTGGGAGT+GGG | + | tig0017062:22314-22333 | Msa1360460:intron | 45.0% |
| !! | CTTCTGAGGTATGCCCTTAT+CGG | + | tig0017062:22572-22591 | Msa1360460:intron | 45.0% |
| GTTGCAAACTACACCCACAA+AGG | - | tig0017062:22655-22674 | None:intergenic | 45.0% | |
| TTTGCAACGTGTTTGACAGG+AGG | + | tig0017062:22667-22686 | Msa1360460:CDS | 45.0% | |
| CTCTCATGCTTGCATAAGTG+GGG | - | tig0017062:22783-22802 | None:intergenic | 45.0% | |
| GCTCTCATGCTTGCATAAGT+GGG | - | tig0017062:22784-22803 | None:intergenic | 45.0% | |
| AGCTCTCATGCTTGCATAAG+TGG | - | tig0017062:22785-22804 | None:intergenic | 45.0% | |
| GGATCACAAAGCAAAGAGAG+AGG | + | tig0017062:22929-22948 | Msa1360460:intron | 45.0% | |
| !! | AAGCAAAGAGAGAGGTACTC+TGG | + | tig0017062:22937-22956 | Msa1360460:intron | 45.0% |
| GTCTGCTTACTCTAAACAGC+GGG | + | tig0017062:23215-23234 | Msa1360460:intron | 45.0% | |
| TCTGCTTACTCTAAACAGCG+GGG | + | tig0017062:23216-23235 | Msa1360460:intron | 45.0% | |
| CATACGCATGCAGGAAGAAT+AGG | - | tig0017062:23333-23352 | None:intergenic | 45.0% | |
| CTCCAAAAACATACGCATGC+AGG | - | tig0017062:23342-23361 | None:intergenic | 45.0% | |
| GAGCCTTGACAAGAATTGCT+TGG | + | tig0017062:23408-23427 | Msa1360460:intron | 45.0% | |
| GACCCAAGCAATTCTTGTCA+AGG | - | tig0017062:23414-23433 | None:intergenic | 45.0% | |
| ! | CTCTAAACTTGCTTCTTCGC+CGG | + | tig0017062:23458-23477 | Msa1360460:CDS | 45.0% |
| ! | TCTAAACTTGCTTCTTCGCC+GGG | + | tig0017062:23459-23478 | Msa1360460:CDS | 45.0% |
| TTACCTCATCCACCAGAAGT+GGG | - | tig0017062:23830-23849 | None:intergenic | 45.0% | |
| TTTACCTCATCCACCAGAAG+TGG | - | tig0017062:23831-23850 | None:intergenic | 45.0% | |
| GTTGTTAACGGCAACAAAGC+TGG | + | tig0017062:23986-24005 | Msa1360460:CDS | 45.0% | |
| TCAATGTGGATCCCACACAT+TGG | - | tig0017062:24222-24241 | None:intergenic | 45.0% | |
| GTGGAGTCAACTGTACGTAT+TGG | - | tig0017062:24602-24621 | None:intergenic | 45.0% | |
| ! | TCTTTTTCTTGTGGGGGGTT+TGG | + | tig0017062:24953-24972 | Msa1360460:intron | 45.0% |
| TCTGCTTTCACTACTTTGGC+TGG | - | tig0017062:25104-25123 | None:intergenic | 45.0% | |
| AGGCTAAAAGTGGTAGAGCA+GGG | - | tig0017062:25152-25171 | None:intergenic | 45.0% | |
| AAGGCTAAAAGTGGTAGAGC+AGG | - | tig0017062:25153-25172 | None:intergenic | 45.0% | |
| !! | ATATGGACAGAGGGTACCTT+TGG | + | tig0017062:25222-25241 | Msa1360460:intron | 45.0% |
| TTATGAGCAGCTACTGACAC+CGG | + | tig0017062:25297-25316 | Msa1360460:intron | 45.0% | |
| AACTTCGACCCTCTTTACCA+TGG | - | tig0017062:25343-25362 | None:intergenic | 45.0% | |
| TCCTGGATTTGGGTACACTT+GGG | - | tig0017062:25410-25429 | None:intergenic | 45.0% | |
| ATCCTGGATTTGGGTACACT+TGG | - | tig0017062:25411-25430 | None:intergenic | 45.0% | |
| TCTATCCTTCCCCTTAGTGA+TGG | + | tig0017062:25459-25478 | Msa1360460:intron | 45.0% | |
| TGATACCATCACTAAGGGGA+AGG | - | tig0017062:25467-25486 | None:intergenic | 45.0% | |
| GCAACTTTGTAGAGGGTAAC+AGG | + | tig0017062:25519-25538 | Msa1360460:intron | 45.0% | |
| ! | GGAAGACTTTTATGCTGTCG+TGG | + | tig0017062:25834-25853 | Msa1360460:intron | 45.0% |
| GCATAGATATCCGAGACTCT+AGG | - | tig0017062:25975-25994 | None:intergenic | 45.0% | |
| CAATATACCGGTCACCTACA+CGG | - | tig0017062:26005-26024 | None:intergenic | 45.0% | |
| TGAACGGAATGTTCGCCAAA+TGG | + | tig0017062:26138-26157 | Msa1360460:CDS | 45.0% | |
| GAACGGAATGTTCGCCAAAT+GGG | + | tig0017062:26139-26158 | Msa1360460:CDS | 45.0% | |
| !!! | ACATTATAAATATTTTTAAA+AGG | + | tig0017062:16031-16050 | Msa1360460:intron | 5.0% |
| !!! | TATAATTTTTTTTTTTTTGT+TGG | + | tig0017062:24658-24677 | Msa1360460:intron | 5.0% |
| GGTAGATTTCGCCATTTCGC+CGG | - | tig0017062:15119-15138 | None:intergenic | 50.0% | |
| GGCGAAATGGCGAAATCTAC+CGG | + | tig0017062:15118-15137 | Msa1360460:exon | 50.0% | |
| !! | TTGCTGATTCACAAGCTCGC+CGG | - | tig0017062:15159-15178 | None:intergenic | 50.0% |
| CTAGAGAGAGCAAGAACCCT+AGG | - | tig0017062:15283-15302 | None:intergenic | 50.0% | |
| AGACACTGATACGTCGACAC+CGG | + | tig0017062:15426-15445 | Msa1360460:intron | 50.0% | |
| ! | GAGCCACACTTTGGCTTCTA+AGG | - | tig0017062:17376-17395 | None:intergenic | 50.0% |
| ! | GTGGTTGAGTTGTACGTGAG+GGG | + | tig0017062:17471-17490 | Msa1360460:intron | 50.0% |
| !! | TGTTTTGGGTCGCCTTCCTA+AGG | + | tig0017062:17577-17596 | Msa1360460:CDS | 50.0% |
| AAGTCCACGACTTCAAGCTG+AGG | + | tig0017062:17794-17813 | Msa1360460:intron | 50.0% | |
| AGATCCTCAGCTTGAAGTCG+TGG | - | tig0017062:17801-17820 | None:intergenic | 50.0% | |
| AGATAAGAAGGGGGAAGGCA+AGG | - | tig0017062:18003-18022 | None:intergenic | 50.0% | |
| ATGGGAGATAAGAAGGGGGA+AGG | - | tig0017062:18008-18027 | None:intergenic | 50.0% | |
| !! | GGAATGGAGGGAGTATCCAA+TGG | - | tig0017062:18114-18133 | None:intergenic | 50.0% |
| ! | TCAGTCATAGCGGAAGCAAC+AGG | - | tig0017062:18497-18516 | None:intergenic | 50.0% |
| ! | AGAGGACATGGAGGCTCTTT+TGG | + | tig0017062:18568-18587 | Msa1360460:CDS | 50.0% |
| ! | GAGGACATGGAGGCTCTTTT+GGG | + | tig0017062:18569-18588 | Msa1360460:CDS | 50.0% |
| ATGTAGGACACTTACAGGGG+CGG | + | tig0017062:18848-18867 | Msa1360460:intron | 50.0% | |
| ATTATGACAGGGGGAGCCTT+TGG | + | tig0017062:18877-18896 | Msa1360460:intron | 50.0% | |
| GGATCTATGTACCAGGCAGT+AGG | + | tig0017062:19574-19593 | Msa1360460:intron | 50.0% | |
| ! | AGGAAGTATGGATACGGCCA+GGG | - | tig0017062:19886-19905 | None:intergenic | 50.0% |
| ! | TAGGAAGTATGGATACGGCC+AGG | - | tig0017062:19887-19906 | None:intergenic | 50.0% |
| TGCAGGTATGTCATGGGTGT+TGG | + | tig0017062:20067-20086 | Msa1360460:intron | 50.0% | |
| AAGACTGAAGAGAGAGCTCC+AGG | + | tig0017062:20111-20130 | Msa1360460:CDS | 50.0% | |
| ! | TGTGTGTCGCAGGTGTTGTA+TGG | + | tig0017062:21285-21304 | Msa1360460:intron | 50.0% |
| ! | GTGTGTCGCAGGTGTTGTAT+GGG | + | tig0017062:21286-21305 | Msa1360460:intron | 50.0% |
| TAAACTCCGGCACATGAGAG+AGG | + | tig0017062:21368-21387 | Msa1360460:CDS | 50.0% | |
| GGGCTTGTACCCTTCAATCA+AGG | + | tig0017062:21406-21425 | Msa1360460:intron | 50.0% | |
| GTTTGTCTTGTGGCCTCATC+AGG | + | tig0017062:22014-22033 | Msa1360460:intron | 50.0% | |
| CCACTCCCAGCACCAAAAAA+TGG | - | tig0017062:22316-22335 | None:intergenic | 50.0% | |
| !!! | CCATTTTTTGGTGCTGGGAG+TGG | + | tig0017062:22313-22332 | Msa1360460:intron | 50.0% |
| ! | CGATAAGGGCATACCTCAGA+AGG | - | tig0017062:22574-22593 | None:intergenic | 50.0% |
| GATTGCTCGTTGTGCTCTAC+AGG | + | tig0017062:22994-23013 | Msa1360460:intron | 50.0% | |
| TCAAGGCTCTGCAAGTGTGT+AGG | - | tig0017062:23397-23416 | None:intergenic | 50.0% | |
| GAGTTCGTTGGCAAACTCAC+GGG | - | tig0017062:23679-23698 | None:intergenic | 50.0% | |
| GGAGTTCGTTGGCAAACTCA+CGG | - | tig0017062:23680-23699 | None:intergenic | 50.0% | |
| TGTACTAGCACGGAGTTCGT+TGG | - | tig0017062:23691-23710 | None:intergenic | 50.0% | |
| GAGCCTTCAAGCCAAACAGT+TGG | - | tig0017062:23729-23748 | None:intergenic | 50.0% | |
| TGGCTTGAAGGCTCAACTAG+TGG | + | tig0017062:23735-23754 | Msa1360460:CDS | 50.0% | |
| ! | TATCCCACTTCTGGTGGATG+AGG | + | tig0017062:23824-23843 | Msa1360460:CDS | 50.0% |
| GTTCCTACACTTGTTCCTCC+AGG | + | tig0017062:23959-23978 | Msa1360460:CDS | 50.0% | |
| !! | CCTCCAGGAGGTGTTGTTAA+CGG | + | tig0017062:23974-23993 | Msa1360460:CDS | 50.0% |
| TTGCCGTTAACAACACCTCC+TGG | - | tig0017062:23980-23999 | None:intergenic | 50.0% | |
| GCGTGTCCCACCACTTTATT+TGG | + | tig0017062:24187-24206 | Msa1360460:intron | 50.0% | |
| CCAAGTGGGAAGCCATTGAA+GGG | + | tig0017062:25070-25089 | Msa1360460:intron | 50.0% | |
| CAAGTGGGAAGCCATTGAAG+GGG | + | tig0017062:25071-25090 | Msa1360460:intron | 50.0% | |
| CTGGATGTCAACCCCTTCAA+TGG | - | tig0017062:25085-25104 | None:intergenic | 50.0% | |
| GGCTAAAAGTGGTAGAGCAG+GGG | - | tig0017062:25151-25170 | None:intergenic | 50.0% | |
| GGTTAAGGGGGTTCGATTAG+AGG | - | tig0017062:25271-25290 | None:intergenic | 50.0% | |
| TATGAGCAGCTACTGACACC+GGG | + | tig0017062:25298-25317 | Msa1360460:intron | 50.0% | |
| ACCCAAGTGTACCCAAATCC+AGG | + | tig0017062:25406-25425 | Msa1360460:intron | 50.0% | |
| ACTAAGCCCAGGCCTTTCAA+AGG | + | tig0017062:25674-25693 | Msa1360460:intron | 50.0% | |
| !! | TGTTGGCCTTTGAAAGGCCT+GGG | - | tig0017062:25683-25702 | None:intergenic | 50.0% |
| !! | ATGTTGGCCTTTGAAAGGCC+TGG | - | tig0017062:25684-25703 | None:intergenic | 50.0% |
| TCTATGCAGTTCAGCCGTGT+AGG | + | tig0017062:25988-26007 | Msa1360460:CDS | 50.0% | |
| ATTGCGGAGGAGCCACACTT+TGG | - | tig0017062:17385-17404 | None:intergenic | 55.0% | |
| AAAGTGTGGCTCCTCCGCAA+TGG | + | tig0017062:17384-17403 | Msa1360460:CDS | 55.0% | |
| TTTCGCATCGTCCATTGCGG+AGG | - | tig0017062:17398-17417 | None:intergenic | 55.0% | |
| ! | GTTGAGTTGTACGTGAGGGG+AGG | + | tig0017062:17474-17493 | Msa1360460:intron | 55.0% |
| ! | GGAGTTGGCTCTTTGGGCTA+AGG | + | tig0017062:17619-17638 | Msa1360460:CDS | 55.0% |
| GCTCTTTGGGCTAAGGTGCA+TGG | + | tig0017062:17626-17645 | Msa1360460:intron | 55.0% | |
| CATGTCCTCTTCCTCTGCCT+GGG | - | tig0017062:18558-18577 | None:intergenic | 55.0% | |
| ! | CATTTGCTGCTTCCAGAGCC+TGG | - | tig0017062:20132-20151 | None:intergenic | 55.0% |
| !! | GTGGCCTCATCAGGGCATTT+TGG | + | tig0017062:22023-22042 | Msa1360460:intron | 55.0% |
| TCTGCCAACACCTCTCTCTC+TGG | + | tig0017062:22086-22105 | Msa1360460:intron | 55.0% | |
| ! | CACACCAGAGAGAGAGGTGT+TGG | - | tig0017062:22093-22112 | None:intergenic | 55.0% |
| TGGTTGACTAGTGCCTTGCG+CGG | + | tig0017062:22736-22755 | Msa1360460:CDS | 55.0% | |
| AACAGCGGGGACAGTTGAAG+AGG | + | tig0017062:23229-23248 | Msa1360460:intron | 55.0% | |
| TACCGCAGGTCAGCATGATC+AGG | - | tig0017062:23255-23274 | None:intergenic | 55.0% | |
| ATGTCCTGCACTTGTACCGC+AGG | - | tig0017062:23269-23288 | None:intergenic | 55.0% | |
| ! | AAACTTGCTTCTTCGCCGGG+AGG | + | tig0017062:23462-23481 | Msa1360460:CDS | 55.0% |
| CCTCCTGGAGGAACAAGTGT+AGG | - | tig0017062:23965-23984 | None:intergenic | 55.0% | |
| CCTACACTTGTTCCTCCAGG+AGG | + | tig0017062:23962-23981 | Msa1360460:CDS | 55.0% | |
| CCGTTAACAACACCTCCTGG+AGG | - | tig0017062:23977-23996 | None:intergenic | 55.0% | |
| GCCAAGTGGGAAGCCATTGA+AGG | + | tig0017062:25069-25088 | Msa1360460:intron | 55.0% | |
| CCCTTCAATGGCTTCCCACT+TGG | - | tig0017062:25073-25092 | None:intergenic | 55.0% | |
| GGTCAGAAAGCTGATGCAGC+AGG | + | tig0017062:25925-25944 | Msa1360460:CDS | 55.0% | |
| TGCTTGGCGACCTAGAGTCT+CGG | + | tig0017062:25962-25981 | Msa1360460:CDS | 55.0% | |
| AGTTCAGCCGTGTAGGTGAC+CGG | + | tig0017062:25995-26014 | Msa1360460:CDS | 55.0% | |
| CCGGAGTTCAACATCGTCGC+CGG | - | tig0017062:15140-15159 | None:intergenic | 60.0% | |
| CCGGCGACGATGTTGAACTC+CGG | + | tig0017062:15137-15156 | Msa1360460:CDS | 60.0% | |
| CACTGATACGTCGACACCGG+TGG | + | tig0017062:15429-15448 | Msa1360460:intron | 60.0% | |
| !! | GAGAGCGCCCGACAAAGTCA+GGG | - | tig0017062:15998-16017 | None:intergenic | 60.0% |
| !! | TGAGAGCGCCCGACAAAGTC+AGG | - | tig0017062:15999-16018 | None:intergenic | 60.0% |
| GGTCGCCTTCCTAAGGTCGT+TGG | + | tig0017062:17584-17603 | Msa1360460:CDS | 60.0% | |
| AGACCTTGTCTCCCAGGCAG+AGG | + | tig0017062:18544-18563 | Msa1360460:CDS | 60.0% | |
| CTTCCTCTGCCTGGGAGACA+AGG | - | tig0017062:18550-18569 | None:intergenic | 60.0% | |
| TGTCTCCCAGGCAGAGGAAG+AGG | + | tig0017062:18550-18569 | Msa1360460:CDS | 60.0% | |
| CCATGTCCTCTTCCTCTGCC+TGG | - | tig0017062:18559-18578 | None:intergenic | 60.0% | |
| CCAGGCAGAGGAAGAGGACA+TGG | + | tig0017062:18556-18575 | Msa1360460:CDS | 60.0% | |
| GGCAGAGGAAGAGGACATGG+AGG | + | tig0017062:18559-18578 | Msa1360460:CDS | 60.0% | |
| GGGCAATTGTCCCTACTGCC+TGG | - | tig0017062:19588-19607 | None:intergenic | 60.0% | |
| GAAGAGAGAGCTCCAGGCTC+TGG | + | tig0017062:20117-20136 | Msa1360460:CDS | 60.0% | |
| GCGGTTGCGTGTACCTTCTG+AGG | + | tig0017062:22558-22577 | Msa1360460:CDS | 60.0% | |
| GGCCTGATCATGCTGACCTG+CGG | + | tig0017062:23250-23269 | Msa1360460:CDS | 60.0% | |
| CTGACCTGCGGTACAAGTGC+AGG | + | tig0017062:23262-23281 | Msa1360460:CDS | 60.0% | |
| GGGCACTTCAAGACCGCGCA+AGG | - | tig0017062:22752-22771 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0017062 | gene | 15052 | 26181 | 15052 | ID=Msa1360460;Name=Msa1360460 |
| tig0017062 | mRNA | 15052 | 26181 | 15052 | ID=Msa1360460-mRNA-1;Parent=Msa1360460;Name=Msa1360460-mRNA-1;_AED=0.11;_eAED=0.11;_QI=72|0.94|0.88|1|1|1|18|0|679 |
| tig0017062 | exon | 15052 | 15301 | 15052 | ID=Msa1360460-mRNA-1:exon:11939;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 16831 | 16901 | 16831 | ID=Msa1360460-mRNA-1:exon:11940;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 17116 | 17196 | 17116 | ID=Msa1360460-mRNA-1:exon:11941;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 17362 | 17429 | 17362 | ID=Msa1360460-mRNA-1:exon:11942;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 17538 | 17640 | 17538 | ID=Msa1360460-mRNA-1:exon:11943;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 18446 | 18594 | 18446 | ID=Msa1360460-mRNA-1:exon:11944;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 20072 | 20189 | 20072 | ID=Msa1360460-mRNA-1:exon:11945;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 21297 | 21401 | 21297 | ID=Msa1360460-mRNA-1:exon:11946;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 22478 | 22579 | 22478 | ID=Msa1360460-mRNA-1:exon:11947;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 22667 | 22804 | 22667 | ID=Msa1360460-mRNA-1:exon:11948;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 23016 | 23144 | 23016 | ID=Msa1360460-mRNA-1:exon:11949;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 23234 | 23314 | 23234 | ID=Msa1360460-mRNA-1:exon:11950;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 23409 | 23483 | 23409 | ID=Msa1360460-mRNA-1:exon:11951;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 23675 | 23845 | 23675 | ID=Msa1360460-mRNA-1:exon:11952;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 23926 | 24067 | 23926 | ID=Msa1360460-mRNA-1:exon:11953;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 24709 | 24773 | 24709 | ID=Msa1360460-mRNA-1:exon:11954;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 25835 | 26016 | 25835 | ID=Msa1360460-mRNA-1:exon:11955;Parent=Msa1360460-mRNA-1 |
| tig0017062 | exon | 26103 | 26181 | 26103 | ID=Msa1360460-mRNA-1:exon:11956;Parent=Msa1360460-mRNA-1 |
| tig0017062 | five_prime_UTR | 15052 | 15123 | 15052 | ID=Msa1360460-mRNA-1:five_prime_utr;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 15124 | 15301 | 15124 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 16831 | 16901 | 16831 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 17116 | 17196 | 17116 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 17362 | 17429 | 17362 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 17538 | 17640 | 17538 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 18446 | 18594 | 18446 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 20072 | 20189 | 20072 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 21297 | 21401 | 21297 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 22478 | 22579 | 22478 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 22667 | 22804 | 22667 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 23016 | 23144 | 23016 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 23234 | 23314 | 23234 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 23409 | 23483 | 23409 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 23675 | 23845 | 23675 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 23926 | 24067 | 23926 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 24709 | 24773 | 24709 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 25835 | 26016 | 25835 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| tig0017062 | CDS | 26103 | 26181 | 26103 | ID=Msa1360460-mRNA-1:cds;Parent=Msa1360460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
