AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1361350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1361350 MtrunA17_Chr4g0072471 95.796 333 12 1 1 331 1 333 0.0 640
Msa1361350 MtrunA17_Chr1g0152781 57.746 142 58 2 3 143 1 141 1.52e-41 147
Msa1361350 MtrunA17_Chr3g0134601 47.857 140 70 2 3 139 1 140 1.28e-29 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1361350 AT4G30240.1 46.497 314 126 8 1 309 1 277 2.27e-78 242
Msa1361350 AT2G18860.1 42.173 313 137 9 1 310 1 272 3.51e-72 226
Msa1361350 AT2G18860.3 43.151 292 132 8 1 289 1 261 3.26e-70 220
Msa1361350 AT2G18860.2 38.596 285 131 9 29 310 10 253 3.26e-54 179
Msa1361350 AT1G27700.1 47.619 147 77 0 3 149 1 147 1.55e-38 139

Find 153 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTTCAACCTGGGAAATT+TGG 0.091839 tig0017492:-20397 None:intergenic
ACCCCTTCGGTGGGTAAATT+TGG 0.141444 tig0017492:+20454 Msa1361350:CDS
GGCAAATAGATTAATCATTT+TGG 0.144921 tig0017492:+21723 Msa1361350:three_prime_UTR
GGTTTGGATCCTTTCTCTTT+AGG 0.148009 tig0017492:-20890 None:intergenic
GTTTGGATCCTTTCTCTTTA+GGG 0.201441 tig0017492:-20889 None:intergenic
AGAAATAAGTTCTAATGTTT+TGG 0.209646 tig0017492:-21912 None:intergenic
ATTTGGACATTATGCATAAA+AGG 0.213920 tig0017492:-21504 None:intergenic
TTTATCTGCACCTGTTCTTA+TGG 0.221241 tig0017492:+21593 Msa1361350:three_prime_UTR
ATTTGAAGGCAATAAATAAA+TGG 0.233198 tig0017492:+23047 Msa1361350:three_prime_UTR
GAATGAAGAGCTTCTACTTT+TGG 0.248886 tig0017492:-22199 None:intergenic
TTTAAAACAGTTGGAAGAAT+TGG 0.261799 tig0017492:+20289 Msa1361350:intron
GTATGTCTACTTTAGTTTCC+TGG 0.263129 tig0017492:+23344 Msa1361350:three_prime_UTR
CTCTGCAGCCGAGGAGGTTC+AGG 0.266450 tig0017492:+19489 Msa1361350:CDS
TATCAAAATTATAGTCCTTA+TGG 0.275043 tig0017492:+21404 Msa1361350:three_prime_UTR
TATGAAAACCCAACCGAAAA+AGG 0.287188 tig0017492:+19175 None:intergenic
AGAAGTTGCTTATGTGTATA+TGG 0.288246 tig0017492:-19327 None:intergenic
AGGGAGCTTCAAACTGCTTT+AGG 0.292513 tig0017492:+20101 Msa1361350:CDS
AACAGGTGCAGATAAAATAT+TGG 0.308339 tig0017492:-21586 None:intergenic
CAGCCTCAAAAGTCAAGATT+TGG 0.310137 tig0017492:-22225 None:intergenic
TGTCACATTCTTGTATTTAG+TGG 0.320781 tig0017492:+23204 Msa1361350:three_prime_UTR
CTGCTTTAGGTACTGCTAAA+TGG 0.321915 tig0017492:+20114 Msa1361350:CDS
GCAACTGGCAAGAATGTTTA+TGG 0.324178 tig0017492:+22026 Msa1361350:three_prime_UTR
AACAATCCATCTGAGGAAAA+AGG 0.326037 tig0017492:-22117 None:intergenic
TAGCTAATAGTTTCGATCTA+TGG 0.328698 tig0017492:+19449 Msa1361350:CDS
CGTAGAAAACTTAAATAAAC+TGG 0.329574 tig0017492:+22989 Msa1361350:intron
AATATCCGAGTAACTAGTTT+TGG 0.330825 tig0017492:+21381 Msa1361350:three_prime_UTR
AAGGATCCAAACCTCTCTTC+TGG 0.337912 tig0017492:+20900 Msa1361350:CDS
CATAATTCATTTAATTCCTC+TGG 0.338945 tig0017492:-20077 None:intergenic
GCATGCTGCCAATCATGTTT+TGG 0.352029 tig0017492:+21702 Msa1361350:three_prime_UTR
CTTTCTAAAGCGATGGGAAT+AGG 0.353105 tig0017492:+23315 Msa1361350:three_prime_UTR
TTCTGATGGTGATTGATAAA+AGG 0.355613 tig0017492:+23112 Msa1361350:three_prime_UTR
ATTCTTAAAGCAGCATGATT+AGG 0.356656 tig0017492:-20809 None:intergenic
ACAGGTGCAGATAAAATATT+GGG 0.357168 tig0017492:-21585 None:intergenic
CAGGGCTCTCCTTGTTCTGA+TGG 0.360335 tig0017492:+23098 Msa1361350:three_prime_UTR
CAAGCGCATATTGATACATA+TGG 0.362466 tig0017492:-21293 None:intergenic
TATGTCTACTTTAGTTTCCT+GGG 0.375486 tig0017492:+23345 Msa1361350:three_prime_UTR
TACAAGAATGTGACACTGAT+TGG 0.378744 tig0017492:-23196 None:intergenic
TCTATTTGCCAAAACATGAT+TGG 0.402675 tig0017492:-21710 None:intergenic
CTTTGACGAAAACCTCAATT+CGG 0.406561 tig0017492:+20567 Msa1361350:CDS
GATTGTTGTGGACTGTGGTT+TGG 0.415889 tig0017492:+22133 Msa1361350:three_prime_UTR
CTGGGAAATTTGGCTTTCAA+TGG 0.416711 tig0017492:-20387 None:intergenic
AGCTGTTCATATGTTCAATC+AGG 0.418102 tig0017492:+20958 Msa1361350:CDS
AATCTGAAAATTGTGGCAAC+TGG 0.430669 tig0017492:+22011 Msa1361350:three_prime_UTR
TTTAGAAAGGTGGTTGGTAA+TGG 0.433148 tig0017492:-23301 None:intergenic
GTGATTGATAAAAGGTCAAA+TGG 0.433619 tig0017492:+23120 Msa1361350:three_prime_UTR
ATGTATATACACTTAATAAC+AGG 0.433955 tig0017492:-23368 None:intergenic
AGGAATTAAATGAATTATGC+AGG 0.439104 tig0017492:+20081 Msa1361350:CDS
TTGTTTCCAGAAGAGAGGTT+TGG 0.440197 tig0017492:-20906 None:intergenic
TTTATTCAACTTGAGCTAAA+CGG 0.442824 tig0017492:+21858 Msa1361350:three_prime_UTR
CCTAAAAGATTCTTAACAGC+TGG 0.444932 tig0017492:+21265 Msa1361350:exon
CCCTCAGATCTGCTTCAACC+TGG 0.446112 tig0017492:-20406 None:intergenic
ACTCCATGTCTTCCTTGTAC+TGG 0.447202 tig0017492:-20780 None:intergenic
CTTCACTCAATCAGTTAAAG+AGG 0.454000 tig0017492:+21884 Msa1361350:three_prime_UTR
CACTATACTACTATTTGCAT+TGG 0.455487 tig0017492:+23421 Msa1361350:three_prime_UTR
TTGCCTTCAAATAAAAGTCT+AGG 0.455978 tig0017492:-23036 None:intergenic
GGATGGTTCTACTAATGAAA+AGG 0.465309 tig0017492:+20646 Msa1361350:CDS
CAATGCAAATAGTAGTATAG+TGG 0.469515 tig0017492:-23420 None:intergenic
ACAGAATGGAATCAGCATAC+AGG 0.470613 tig0017492:+20021 Msa1361350:intron
CTATTCCCATCGCTTTAGAA+AGG 0.474293 tig0017492:-23314 None:intergenic
GCTTAAACGTTTCTTTCTGA+AGG 0.475819 tig0017492:+19231 Msa1361350:five_prime_UTR
CTTGCTCACCAAATTTCAAA+AGG 0.476513 tig0017492:-21464 None:intergenic
GTTTCGCATTATAGAGAAAA+GGG 0.478262 tig0017492:+19205 Msa1361350:five_prime_UTR
CATTGAAAGCCAAATTTCCC+AGG 0.483766 tig0017492:+20388 Msa1361350:CDS
AACTTGTTTCTCCCGAATTG+AGG 0.485538 tig0017492:-20579 None:intergenic
GGTTTCGCATTATAGAGAAA+AGG 0.488311 tig0017492:+19204 Msa1361350:five_prime_UTR
AGTGCTTTGCACAGTCTCAC+AGG 0.489966 tig0017492:-20519 None:intergenic
TTTGATATATCTGCCTGTGC+TGG 0.492583 tig0017492:+23146 Msa1361350:three_prime_UTR
TTTGACGAAAACCTCAATTC+GGG 0.493300 tig0017492:+20568 Msa1361350:CDS
GGGCTAAGCTACCGACATCT+TGG 0.493305 tig0017492:+20323 Msa1361350:CDS
ATGTCCAAATTACAAAATAG+AGG 0.498871 tig0017492:+21517 Msa1361350:three_prime_UTR
GGTTAAGAGAGAAGAGAGAA+AGG 0.498990 tig0017492:+20048 Msa1361350:CDS
GGTTTGCGTTTGCATGATTG+AGG 0.499966 tig0017492:+21640 Msa1361350:three_prime_UTR
TAGCTACCAACATCTTCAAA+AGG 0.500447 tig0017492:-19432 None:intergenic
TTACATAGAGGGCCGAAGCC+CGG 0.512814 tig0017492:+21948 Msa1361350:three_prime_UTR
CAACCACCTTTCTAAAGCGA+TGG 0.516021 tig0017492:+23308 Msa1361350:three_prime_UTR
GCTTCCACACGCTACACATG+TGG 0.518095 tig0017492:-23267 None:intergenic
CAGAATGGAATCAGCATACA+GGG 0.520364 tig0017492:+20022 Msa1361350:intron
CCTCAGATCTGCTTCAACCT+GGG 0.523429 tig0017492:-20405 None:intergenic
TTTGGATCCTTTCTCTTTAG+GGG 0.524248 tig0017492:-20888 None:intergenic
CAGATACAACAACCAGTACA+AGG 0.524875 tig0017492:+20768 Msa1361350:CDS
AAAGCAAAAGAAGAAGAAGA+AGG 0.526366 tig0017492:-19270 None:intergenic
TACTAATGAAAAGGCTTCTG+TGG 0.526782 tig0017492:+20655 Msa1361350:CDS
GATCTCGCCTCCATAAGAAC+AGG 0.527477 tig0017492:-21603 None:intergenic
TTTCCTCAGATGGATTGTTG+TGG 0.531807 tig0017492:+22121 Msa1361350:three_prime_UTR
TTCCCATCGCTTTAGAAAGG+TGG 0.534392 tig0017492:-23311 None:intergenic
ATCTGCACCTGTTCTTATGG+AGG 0.537427 tig0017492:+21596 Msa1361350:three_prime_UTR
AATTGCTGATGAAGATGAGC+AGG 0.537668 tig0017492:+20835 Msa1361350:CDS
TAAAATAAATCTGAAAATTG+TGG 0.538580 tig0017492:+22004 Msa1361350:three_prime_UTR
GTTGGTAATGGTTATGATGT+CGG 0.540095 tig0017492:-23289 None:intergenic
CAAGTTGAATAAAATACAAA+GGG 0.540723 tig0017492:-21848 None:intergenic
GTTTGCGTTTGCATGATTGA+GGG 0.543737 tig0017492:+21641 Msa1361350:three_prime_UTR
ATAAAAGGAACATGAGCAAG+AGG 0.544167 tig0017492:-21489 None:intergenic
TACAGTAATTAAGAAAGCAA+AGG 0.546771 tig0017492:-21779 None:intergenic
GATGCCACCCCTAAAGAGAA+AGG 0.547656 tig0017492:+20881 Msa1361350:CDS
CTTCCACACGCTACACATGT+GGG 0.549762 tig0017492:-23266 None:intergenic
CGTCCAAATTTACCCACCGA+AGG 0.553026 tig0017492:-20457 None:intergenic
GGATCCTTTCTCTTTAGGGG+TGG 0.554541 tig0017492:-20885 None:intergenic
CGGCCATGTCGCAGATGCAA+AGG 0.556344 tig0017492:-21174 None:intergenic
TGATTGATAAAAGGTCAAAT+GGG 0.556752 tig0017492:+23121 Msa1361350:three_prime_UTR
ACTGCCTGTGCCTAGTGGCT+CGG 0.558413 tig0017492:-20355 None:intergenic
AAGCGCATATTGATACATAT+GGG 0.559413 tig0017492:-21292 None:intergenic
GTCCAAATTTACCCACCGAA+GGG 0.561850 tig0017492:-20456 None:intergenic
CCCAGGTTGAAGCAGATCTG+AGG 0.562799 tig0017492:+20405 Msa1361350:CDS
TGCTTTCTTCTCTGCAGCCG+AGG 0.565270 tig0017492:+19480 Msa1361350:CDS
CAACCAGTACAAGGAAGACA+TGG 0.568883 tig0017492:+20777 Msa1361350:CDS
GAACATATGAACAGCTCGCA+TGG 0.569231 tig0017492:-20951 None:intergenic
TGATACCAAAACTAGTTACT+CGG 0.569769 tig0017492:-21386 None:intergenic
AAAATTCGAAGAATATCCTC+AGG 0.572168 tig0017492:+20928 Msa1361350:CDS
TGGAATCAGCATACAGGGCA+TGG 0.573816 tig0017492:+20027 Msa1361350:CDS
TAAAGCGATGGGAATAGGAT+AGG 0.573955 tig0017492:+23320 Msa1361350:three_prime_UTR
AGCGGATTCCTGAACCTCCT+CGG 0.575345 tig0017492:-19497 None:intergenic
TCAAGTTGAATAAAATACAA+AGG 0.575497 tig0017492:-21849 None:intergenic
ATGGTAAGCAACCCCTTCGG+TGG 0.578081 tig0017492:+20444 Msa1361350:CDS
AGATGGATTGTTGTGGACTG+TGG 0.580209 tig0017492:+22128 Msa1361350:three_prime_UTR
CATCGCTTTAGAAAGGTGGT+TGG 0.580369 tig0017492:-23307 None:intergenic
TTTAGGTACTGCTAAATGGC+AGG 0.580772 tig0017492:+20118 Msa1361350:CDS
CCAGGTTGAAGCAGATCTGA+GGG 0.583115 tig0017492:+20406 Msa1361350:CDS
ACAAAGGGTACTACATACAA+TGG 0.583449 tig0017492:-21833 None:intergenic
TCTGAGGGAATCTAATATTG+AGG 0.588403 tig0017492:+20421 Msa1361350:CDS
ATACACTTAATAACAGGCCC+AGG 0.589040 tig0017492:-23362 None:intergenic
AAGGACTTCGAAGCTGTCGT+TGG 0.589216 tig0017492:-21155 None:intergenic
TCCAAATTTACCCACCGAAG+GGG 0.591063 tig0017492:-20455 None:intergenic
AGTCCTTTGCATCTGCGACA+TGG 0.591902 tig0017492:+21171 Msa1361350:CDS
GAATATGATTCCAAGATCAA+AGG 0.593499 tig0017492:-19383 None:intergenic
AACCACCTTTCTAAAGCGAT+GGG 0.594520 tig0017492:+23309 Msa1361350:three_prime_UTR
AGGATGGTAAGCAACCCCTT+CGG 0.597987 tig0017492:+20441 Msa1361350:CDS
GAGAGAAAGGTCAAATCCAG+AGG 0.600395 tig0017492:+20061 Msa1361350:CDS
TTCCACACGCTACACATGTG+GGG 0.602387 tig0017492:-23265 None:intergenic
TTTCTTCTCTGCAGCCGAGG+AGG 0.602704 tig0017492:+19483 Msa1361350:CDS
CTTAAAGCAGCATGATTAGG+TGG 0.603500 tig0017492:-20806 None:intergenic
AGGGAATCTAATATTGAGGA+TGG 0.604419 tig0017492:+20425 Msa1361350:CDS
GGAATTAAATGAATTATGCA+GGG 0.607214 tig0017492:+20082 Msa1361350:CDS
CAAGTGTAACTTTAAGAGAA+CGG 0.609448 tig0017492:-21194 None:intergenic
TATCAATCACCATCAGAACA+AGG 0.611408 tig0017492:-23107 None:intergenic
ACAACCGAGCCACTAGGCAC+AGG 0.616247 tig0017492:+20351 Msa1361350:CDS
AAAGCAGCATGATTAGGTGG+AGG 0.617166 tig0017492:-20803 None:intergenic
ATATATCTTCTCTTACAACA+TGG 0.620980 tig0017492:+22314 Msa1361350:three_prime_UTR
GTGATGACAACCGAGCCACT+AGG 0.626268 tig0017492:+20345 Msa1361350:CDS
TGGTAAGCAACCCCTTCGGT+GGG 0.635728 tig0017492:+20445 Msa1361350:CDS
TGAACAGCTCGCATGGCCTG+AGG 0.640699 tig0017492:-20944 None:intergenic
TAAAAGGAACATGAGCAAGA+GGG 0.641555 tig0017492:-21488 None:intergenic
GGTTGTCATCACCAAGATGT+CGG 0.646425 tig0017492:-20334 None:intergenic
TCCACACGCTACACATGTGG+GGG 0.650811 tig0017492:-23264 None:intergenic
CATTAGTAGAACCATCCCAA+CGG 0.651159 tig0017492:-20640 None:intergenic
TATAAACTGCCTGTGCCTAG+TGG 0.651749 tig0017492:-20360 None:intergenic
GTGTTGTAAGACTTTCTGCA+CGG 0.665861 tig0017492:-21554 None:intergenic
AAGCACTAAAGATGAATGTG+TGG 0.673162 tig0017492:+20535 Msa1361350:CDS
ATGTGTATGAATGAATGTTG+TGG 0.676108 tig0017492:+23070 Msa1361350:three_prime_UTR
AGGTGCAGATAAAATATTGG+GGG 0.688031 tig0017492:-21583 None:intergenic
AGAGGAAGCGTACATATCAG+CGG 0.688848 tig0017492:-19515 None:intergenic
AGTCCACAACAATCCATCTG+AGG 0.690122 tig0017492:-22124 None:intergenic
CAGGTGCAGATAAAATATTG+GGG 0.717107 tig0017492:-21584 None:intergenic
ATTGCTGATGAAGATGAGCA+GGG 0.719730 tig0017492:+20836 Msa1361350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAAATTTTAATTATGTTTAT+AGG + tig0017492:19815-19834 Msa1361350:intron 10.0%
!!! TATTTTTTTTTATTACATAG+AGG + tig0017492:21936-21955 Msa1361350:three_prime_UTR 10.0%
!!! ATTTTTTTTTATTACATAGA+GGG + tig0017492:21937-21956 Msa1361350:three_prime_UTR 10.0%
!! ACTTAATTCATTTAATGAAT+AGG - tig0017492:19963-19982 None:intergenic 15.0%
!!! ATTTATTGTTTTATACAGAA+TGG + tig0017492:20007-20026 Msa1361350:intron 15.0%
!! TAAAATAAATCTGAAAATTG+TGG + tig0017492:22004-22023 Msa1361350:three_prime_UTR 15.0%
!!! TGGTTGTTTATTATTTTTTA+AGG + tig0017492:22334-22353 Msa1361350:three_prime_UTR 15.0%
!!! GGTTGTTTATTATTTTTTAA+GGG + tig0017492:22335-22354 Msa1361350:three_prime_UTR 15.0%
!!! TGTTTTGATATTATATATCT+AGG + tig0017492:22477-22496 Msa1361350:three_prime_UTR 15.0%
!! TAAACAAAATGATTTATGTT+TGG + tig0017492:22630-22649 Msa1361350:intron 15.0%
!!! TAGTGAATACTTTATTTTTT+AGG + tig0017492:23506-23525 Msa1361350:three_prime_UTR 15.0%
!! TAAATAAAAGAAAGTGAAGA+GGG - tig0017492:19548-19567 None:intergenic 20.0%
!! ATAAATAAAAGAAAGTGAAG+AGG - tig0017492:19549-19568 None:intergenic 20.0%
!!! AACTATTTTTTGAACACTAA+TGG + tig0017492:19660-19679 Msa1361350:intron 20.0%
!!! CTTTTACTTGTTTTAATTTG+TGG + tig0017492:19726-19745 Msa1361350:intron 20.0%
!! AAATCAAAAGTTTGAACTAT+TGG + tig0017492:19845-19864 Msa1361350:intron 20.0%
!! TGAAAATTATTGTACTAAGA+CGG - tig0017492:19988-20007 None:intergenic 20.0%
!!! ATTTTCTGTTTTAAAACAGT+TGG + tig0017492:20280-20299 Msa1361350:intron 20.0%
!! AACAAATCAAATAAAAAGCA+TGG + tig0017492:21343-21362 Msa1361350:three_prime_UTR 20.0%
!! TATCAAAATTATAGTCCTTA+TGG + tig0017492:21404-21423 Msa1361350:three_prime_UTR 20.0%
!!! CAAGTTGAATAAAATACAAA+GGG - tig0017492:21851-21870 None:intergenic 20.0%
!!! TCAAGTTGAATAAAATACAA+AGG - tig0017492:21852-21871 None:intergenic 20.0%
!!! AGAAATAAGTTCTAATGTTT+TGG - tig0017492:21915-21934 None:intergenic 20.0%
!! AAGAATACAAAAACATAATC+CGG - tig0017492:21970-21989 None:intergenic 20.0%
!! TAAAGAATGAGAATTGATAA+AGG + tig0017492:22720-22739 Msa1361350:intron 20.0%
!! AAAGAATGAGAATTGATAAA+GGG + tig0017492:22721-22740 Msa1361350:intron 20.0%
!!! AGTTTATTTAAGTTTTCTAC+GGG - tig0017492:22990-23009 None:intergenic 20.0%
!!! CAGTTTATTTAAGTTTTCTA+CGG - tig0017492:22991-23010 None:intergenic 20.0%
!! ATTTGAAGGCAATAAATAAA+TGG + tig0017492:23047-23066 Msa1361350:three_prime_UTR 20.0%
!! ATGTATATACACTTAATAAC+AGG - tig0017492:23371-23390 None:intergenic 20.0%
!!! TATTTTCCTTTTGAAGATGT+TGG + tig0017492:19426-19445 Msa1361350:exon 25.0%
! ATTAATTTCGTGTTATACTG+TGG + tig0017492:19583-19602 Msa1361350:intron 25.0%
! TTAATTTCGTGTTATACTGT+GGG + tig0017492:19584-19603 Msa1361350:intron 25.0%
!!! TTTTTTCTTGGGTAGTTAAA+TGG + tig0017492:19762-19781 Msa1361350:intron 25.0%
! CATAATTCATTTAATTCCTC+TGG - tig0017492:20080-20099 None:intergenic 25.0%
! AGGAATTAAATGAATTATGC+AGG + tig0017492:20081-20100 Msa1361350:CDS 25.0%
! GGAATTAAATGAATTATGCA+GGG + tig0017492:20082-20101 Msa1361350:CDS 25.0%
! TAAAGAAATATATTGACACG+CGG - tig0017492:20167-20186 None:intergenic 25.0%
!! TTTAAAACAGTTGGAAGAAT+TGG + tig0017492:20289-20308 Msa1361350:intron 25.0%
! AAGAATTGGAAAAAGCTATT+GGG + tig0017492:20303-20322 Msa1361350:CDS 25.0%
!! ATAAATCGTGATTTTAAGCA+AGG - tig0017492:21047-21066 None:intergenic 25.0%
!!! ATGATGATCATTTTTCTACT+TGG + tig0017492:21222-21241 Msa1361350:CDS 25.0%
!! TGATTGTTTTCAAAACCATA+AGG - tig0017492:21422-21441 None:intergenic 25.0%
! ATTTGGACATTATGCATAAA+AGG - tig0017492:21507-21526 None:intergenic 25.0%
! ATGTCCAAATTACAAAATAG+AGG + tig0017492:21517-21536 Msa1361350:three_prime_UTR 25.0%
!! TTTGCCTCTATTTTGTAATT+TGG - tig0017492:21524-21543 None:intergenic 25.0%
!!! CGAGATCTTTTTTATATGTT+TGG + tig0017492:21619-21638 Msa1361350:three_prime_UTR 25.0%
!! GGCAAATAGATTAATCATTT+TGG + tig0017492:21723-21742 Msa1361350:three_prime_UTR 25.0%
! TACAGTAATTAAGAAAGCAA+AGG - tig0017492:21782-21801 None:intergenic 25.0%
! TTTATTCAACTTGAGCTAAA+CGG + tig0017492:21858-21877 Msa1361350:three_prime_UTR 25.0%
! AGAATACAAAAACATAATCC+GGG - tig0017492:21969-21988 None:intergenic 25.0%
! TTAAGGAAAAAGGAATTATC+TGG - tig0017492:22065-22084 None:intergenic 25.0%
!! ATTCCTTTTTCCTTAAAACA+TGG + tig0017492:22069-22088 Msa1361350:three_prime_UTR 25.0%
! ATATATCTTCTCTTACAACA+TGG + tig0017492:22314-22333 Msa1361350:three_prime_UTR 25.0%
!! TGAGAGAATTGATTTATGTT+TGG + tig0017492:22586-22605 Msa1361350:intron 25.0%
! ACTAAAATAGACATAGCTAA+AGG + tig0017492:22689-22708 Msa1361350:intron 25.0%
! CGTAGAAAACTTAAATAAAC+TGG + tig0017492:22989-23008 Msa1361350:intron 25.0%
!! ACGATGAAATCATTCTTTTT+AGG + tig0017492:23012-23031 Msa1361350:three_prime_UTR 25.0%
! TGATTGATAAAAGGTCAAAT+GGG + tig0017492:23121-23140 Msa1361350:three_prime_UTR 25.0%
GTTTCGCATTATAGAGAAAA+GGG + tig0017492:19205-19224 Msa1361350:five_prime_UTR 30.0%
AAAGCAAAAGAAGAAGAAGA+AGG - tig0017492:19273-19292 None:intergenic 30.0%
AGAAGTTGCTTATGTGTATA+TGG - tig0017492:19330-19349 None:intergenic 30.0%
GAATATGATTCCAAGATCAA+AGG - tig0017492:19386-19405 None:intergenic 30.0%
TAGCTAATAGTTTCGATCTA+TGG + tig0017492:19449-19468 Msa1361350:CDS 30.0%
! AACACTAATGGTAGTGAATT+TGG + tig0017492:19672-19691 Msa1361350:intron 30.0%
! ACACTAATGGTAGTGAATTT+GGG + tig0017492:19673-19692 Msa1361350:intron 30.0%
!! TTTAATTTGTGGTATGCGAA+TGG + tig0017492:19737-19756 Msa1361350:intron 30.0%
TAAATGGAACAATAGAGACA+AGG + tig0017492:19778-19797 Msa1361350:intron 30.0%
GAAGAATTGGAAAAAGCTAT+TGG + tig0017492:20302-20321 Msa1361350:CDS 30.0%
!! ATGTAAATGCTTTTTACCGT+TGG + tig0017492:20624-20643 Msa1361350:CDS 30.0%
!! TGTAAATGCTTTTTACCGTT+GGG + tig0017492:20625-20644 Msa1361350:CDS 30.0%
ATTCTTAAAGCAGCATGATT+AGG - tig0017492:20812-20831 None:intergenic 30.0%
!! AATTTTTGTTTCCAGAAGAG+AGG - tig0017492:20914-20933 None:intergenic 30.0%
AAAATTCGAAGAATATCCTC+AGG + tig0017492:20928-20947 Msa1361350:CDS 30.0%
GAAAGAGACATGTAAAAGAT+AGG + tig0017492:21004-21023 Msa1361350:intron 30.0%
! TTTTTCACTCTGCAGATTTT+TGG + tig0017492:21117-21136 Msa1361350:intron 30.0%
! CAAGTGTAACTTTAAGAGAA+CGG - tig0017492:21197-21216 None:intergenic 30.0%
AAGCGCATATTGATACATAT+GGG - tig0017492:21295-21314 None:intergenic 30.0%
!! AATATCCGAGTAACTAGTTT+TGG + tig0017492:21381-21400 Msa1361350:three_prime_UTR 30.0%
TGATACCAAAACTAGTTACT+CGG - tig0017492:21389-21408 None:intergenic 30.0%
!!! TTGCGTTTCCTTTTGAAATT+TGG + tig0017492:21456-21475 Msa1361350:three_prime_UTR 30.0%
ACAGGTGCAGATAAAATATT+GGG - tig0017492:21588-21607 None:intergenic 30.0%
AACAGGTGCAGATAAAATAT+TGG - tig0017492:21589-21608 None:intergenic 30.0%
!!! TTGAGGGAATATTTTTAGCT+AGG + tig0017492:21657-21676 Msa1361350:three_prime_UTR 30.0%
TCTATTTGCCAAAACATGAT+TGG - tig0017492:21713-21732 None:intergenic 30.0%
!!! CAACCATGTTTTAAGGAAAA+AGG - tig0017492:22075-22094 None:intergenic 30.0%
! CTTTTTCCTTAAAACATGGT+TGG + tig0017492:22073-22092 Msa1361350:three_prime_UTR 30.0%
! TAGTTTCCAACCATGTTTTA+AGG - tig0017492:22082-22101 None:intergenic 30.0%
! ACGTGAATAAACTATTTTGC+TGG - tig0017492:22163-22182 None:intergenic 30.0%
!! AATGAAGAGCTTCTACTTTT+GGG - tig0017492:22201-22220 None:intergenic 30.0%
ATATTCAAAGCTGAACCAAA+CGG - tig0017492:22512-22531 None:intergenic 30.0%
!!! TTTTTGGCTAGAATTGCTTT+TGG + tig0017492:22907-22926 Msa1361350:intron 30.0%
!! CACTGTAGAGAATTGATTTT+GGG + tig0017492:22930-22949 Msa1361350:intron 30.0%
TTGCCTTCAAATAAAAGTCT+AGG - tig0017492:23039-23058 None:intergenic 30.0%
ATGTGTATGAATGAATGTTG+TGG + tig0017492:23070-23089 Msa1361350:three_prime_UTR 30.0%
! TTCTGATGGTGATTGATAAA+AGG + tig0017492:23112-23131 Msa1361350:three_prime_UTR 30.0%
GTGATTGATAAAAGGTCAAA+TGG + tig0017492:23120-23139 Msa1361350:three_prime_UTR 30.0%
TGTCACATTCTTGTATTTAG+TGG + tig0017492:23204-23223 Msa1361350:three_prime_UTR 30.0%
! TATGTCTACTTTAGTTTCCT+GGG + tig0017492:23345-23364 Msa1361350:three_prime_UTR 30.0%
CAATGCAAATAGTAGTATAG+TGG - tig0017492:23423-23442 None:intergenic 30.0%
CACTATACTACTATTTGCAT+TGG + tig0017492:23421-23440 Msa1361350:three_prime_UTR 30.0%
GGTTTCGCATTATAGAGAAA+AGG + tig0017492:19204-19223 Msa1361350:five_prime_UTR 35.0%
GCTTAAACGTTTCTTTCTGA+AGG + tig0017492:19231-19250 Msa1361350:five_prime_UTR 35.0%
! TAGCGATTTTCCTTTGATCT+TGG + tig0017492:19373-19392 Msa1361350:five_prime_UTR 35.0%
TAGCTACCAACATCTTCAAA+AGG - tig0017492:19435-19454 None:intergenic 35.0%
CTTGTCTATGTTTGCATCTA+TGG + tig0017492:19618-19637 Msa1361350:intron 35.0%
!!! ATGCGAATGGAGTTTTTTCT+TGG + tig0017492:19750-19769 Msa1361350:intron 35.0%
!!! TGCGAATGGAGTTTTTTCTT+GGG + tig0017492:19751-19770 Msa1361350:intron 35.0%
AATATATTGACACGCGGAAA+TGG - tig0017492:20161-20180 None:intergenic 35.0%
TCTGAGGGAATCTAATATTG+AGG + tig0017492:20421-20440 Msa1361350:CDS 35.0%
AGGGAATCTAATATTGAGGA+TGG + tig0017492:20425-20444 Msa1361350:CDS 35.0%
AAGCACTAAAGATGAATGTG+TGG + tig0017492:20535-20554 Msa1361350:CDS 35.0%
CTTTGACGAAAACCTCAATT+CGG + tig0017492:20567-20586 Msa1361350:CDS 35.0%
TTTGACGAAAACCTCAATTC+GGG + tig0017492:20568-20587 Msa1361350:CDS 35.0%
! GGATGGTTCTACTAATGAAA+AGG + tig0017492:20646-20665 Msa1361350:CDS 35.0%
TACTAATGAAAAGGCTTCTG+TGG + tig0017492:20655-20674 Msa1361350:CDS 35.0%
TTTGGATCCTTTCTCTTTAG+GGG - tig0017492:20891-20910 None:intergenic 35.0%
GTTTGGATCCTTTCTCTTTA+GGG - tig0017492:20892-20911 None:intergenic 35.0%
AGCTGTTCATATGTTCAATC+AGG + tig0017492:20958-20977 Msa1361350:CDS 35.0%
! GTGATTTTAAGCAAGGTAGA+AGG - tig0017492:21040-21059 None:intergenic 35.0%
TTGTAAGGCACGATATTTGT+CGG - tig0017492:21080-21099 None:intergenic 35.0%
!! GTTAAGAATCTTTTAGGAGC+AGG - tig0017492:21262-21281 None:intergenic 35.0%
! CCAGCTGTTAAGAATCTTTT+AGG - tig0017492:21268-21287 None:intergenic 35.0%
CCTAAAAGATTCTTAACAGC+TGG + tig0017492:21265-21284 Msa1361350:exon 35.0%
CAAGCGCATATTGATACATA+TGG - tig0017492:21296-21315 None:intergenic 35.0%
! TAAAAAGCATGGCATTGTCT+AGG + tig0017492:21354-21373 Msa1361350:three_prime_UTR 35.0%
! AAAAAGCATGGCATTGTCTA+GGG + tig0017492:21355-21374 Msa1361350:three_prime_UTR 35.0%
CTTGCTCACCAAATTTCAAA+AGG - tig0017492:21467-21486 None:intergenic 35.0%
!!! CTTTTGAAATTTGGTGAGCA+AGG + tig0017492:21465-21484 Msa1361350:three_prime_UTR 35.0%
TAAAAGGAACATGAGCAAGA+GGG - tig0017492:21491-21510 None:intergenic 35.0%
ATAAAAGGAACATGAGCAAG+AGG - tig0017492:21492-21511 None:intergenic 35.0%
AGGTGCAGATAAAATATTGG+GGG - tig0017492:21586-21605 None:intergenic 35.0%
CAGGTGCAGATAAAATATTG+GGG - tig0017492:21587-21606 None:intergenic 35.0%
TTTATCTGCACCTGTTCTTA+TGG + tig0017492:21593-21612 Msa1361350:three_prime_UTR 35.0%
!! ACAAAGGGTACTACATACAA+TGG - tig0017492:21836-21855 None:intergenic 35.0%
CTTCACTCAATCAGTTAAAG+AGG + tig0017492:21884-21903 Msa1361350:three_prime_UTR 35.0%
AATCTGAAAATTGTGGCAAC+TGG + tig0017492:22011-22030 Msa1361350:three_prime_UTR 35.0%
AACAATCCATCTGAGGAAAA+AGG - tig0017492:22120-22139 None:intergenic 35.0%
! GAATGAAGAGCTTCTACTTT+TGG - tig0017492:22202-22221 None:intergenic 35.0%
! AAGCCAAATCTTGACTTTTG+AGG + tig0017492:22222-22241 Msa1361350:three_prime_UTR 35.0%
!!! ACTTTTGAGGCTGTAAGATA+GGG + tig0017492:22235-22254 Msa1361350:three_prime_UTR 35.0%
TATTCAAAGCTGAACCAAAC+GGG - tig0017492:22511-22530 None:intergenic 35.0%
AAACCTATACACGTTGTTCA+AGG + tig0017492:22783-22802 Msa1361350:intron 35.0%
! TTCTAGAAAAGCTAGAAGCT+AGG + tig0017492:22814-22833 Msa1361350:intron 35.0%
!! TGAACCAAACACGTTGTTTT+TGG + tig0017492:22891-22910 Msa1361350:intron 35.0%
!! GCACTGTAGAGAATTGATTT+TGG + tig0017492:22929-22948 Msa1361350:intron 35.0%
!! GGACCTAGACTTTTATTTGA+AGG + tig0017492:23033-23052 Msa1361350:three_prime_UTR 35.0%
!! AATGAATGTTGTGGTTTTGC+AGG + tig0017492:23079-23098 Msa1361350:three_prime_UTR 35.0%
!! ATGAATGTTGTGGTTTTGCA+GGG + tig0017492:23080-23099 Msa1361350:three_prime_UTR 35.0%
TATCAATCACCATCAGAACA+AGG - tig0017492:23110-23129 None:intergenic 35.0%
TGGAAAAATGAGTCAGTCAA+GGG + tig0017492:23166-23185 Msa1361350:three_prime_UTR 35.0%
TACAAGAATGTGACACTGAT+TGG - tig0017492:23199-23218 None:intergenic 35.0%
!! GTTGGTAATGGTTATGATGT+CGG - tig0017492:23292-23311 None:intergenic 35.0%
!! TTTAGAAAGGTGGTTGGTAA+TGG - tig0017492:23304-23323 None:intergenic 35.0%
! GTATGTCTACTTTAGTTTCC+TGG + tig0017492:23344-23363 Msa1361350:three_prime_UTR 35.0%
! CGAAACCAGTTCTCCTTTTT+CGG - tig0017492:19191-19210 None:intergenic 40.0%
ATGGAACAATAGAGACAAGG+AGG + tig0017492:19781-19800 Msa1361350:intron 40.0%
TGGAACAATAGAGACAAGGA+GGG + tig0017492:19782-19801 Msa1361350:intron 40.0%
GCTTGAGTGATTGTGCAATT+AGG + tig0017492:19912-19931 Msa1361350:intron 40.0%
TGAGTGATTGTGCAATTAGG+AGG + tig0017492:19915-19934 Msa1361350:intron 40.0%
ACAGAATGGAATCAGCATAC+AGG + tig0017492:20021-20040 Msa1361350:intron 40.0%
CAGAATGGAATCAGCATACA+GGG + tig0017492:20022-20041 Msa1361350:intron 40.0%
GGTTAAGAGAGAAGAGAGAA+AGG + tig0017492:20048-20067 Msa1361350:CDS 40.0%
! CTGCTTTAGGTACTGCTAAA+TGG + tig0017492:20114-20133 Msa1361350:CDS 40.0%
! TTTAGGTACTGCTAAATGGC+AGG + tig0017492:20118-20137 Msa1361350:CDS 40.0%
!! CTGGGAAATTTGGCTTTCAA+TGG - tig0017492:20390-20409 None:intergenic 40.0%
CATTGAAAGCCAAATTTCCC+AGG + tig0017492:20388-20407 Msa1361350:CDS 40.0%
! GATTTTGCTGCGTTTCTATC+TGG + tig0017492:20494-20513 Msa1361350:CDS 40.0%
! AACTTGTTTCTCCCGAATTG+AGG - tig0017492:20582-20601 None:intergenic 40.0%
!! AATGCTTTTTACCGTTGGGA+TGG + tig0017492:20629-20648 Msa1361350:CDS 40.0%
CATTAGTAGAACCATCCCAA+CGG - tig0017492:20643-20662 None:intergenic 40.0%
CAGATACAACAACCAGTACA+AGG + tig0017492:20768-20787 Msa1361350:CDS 40.0%
CTTAAAGCAGCATGATTAGG+TGG - tig0017492:20809-20828 None:intergenic 40.0%
AATTGCTGATGAAGATGAGC+AGG + tig0017492:20835-20854 Msa1361350:CDS 40.0%
ATTGCTGATGAAGATGAGCA+GGG + tig0017492:20836-20855 Msa1361350:CDS 40.0%
GGTTTGGATCCTTTCTCTTT+AGG - tig0017492:20893-20912 None:intergenic 40.0%
TTGTTTCCAGAAGAGAGGTT+TGG - tig0017492:20909-20928 None:intergenic 40.0%
TGTAAGGCACGATATTTGTC+GGG - tig0017492:21079-21098 None:intergenic 40.0%
GACAAATATCGTGCCTTACA+AGG + tig0017492:21079-21098 Msa1361350:intron 40.0%
!!! CTGCAGATTTTTGGTCACAT+TGG + tig0017492:21126-21145 Msa1361350:intron 40.0%
GTGTTGTAAGACTTTCTGCA+CGG - tig0017492:21557-21576 None:intergenic 40.0%
GTTTGCGTTTGCATGATTGA+GGG + tig0017492:21641-21660 Msa1361350:three_prime_UTR 40.0%
CAAAAACATAATCCGGGCTT+CGG - tig0017492:21963-21982 None:intergenic 40.0%
GCAACTGGCAAGAATGTTTA+TGG + tig0017492:22026-22045 Msa1361350:three_prime_UTR 40.0%
! GCTTTTCCTTTTTCCTCAGA+TGG + tig0017492:22111-22130 Msa1361350:three_prime_UTR 40.0%
!! TTTCCTCAGATGGATTGTTG+TGG + tig0017492:22121-22140 Msa1361350:three_prime_UTR 40.0%
CAGCCTCAAAAGTCAAGATT+TGG - tig0017492:22228-22247 None:intergenic 40.0%
!!! GACTTTTGAGGCTGTAAGAT+AGG + tig0017492:22234-22253 Msa1361350:three_prime_UTR 40.0%
TCTCCTTGAACAACGTGTAT+AGG - tig0017492:22789-22808 None:intergenic 40.0%
AGCTAGGATTTGTAGCTTCA+TGG + tig0017492:22830-22849 Msa1361350:intron 40.0%
! GCTTCATGGAGAATTGCTTT+TGG + tig0017492:22844-22863 Msa1361350:intron 40.0%
!! TCATGGAGAATTGCTTTTGG+AGG + tig0017492:22847-22866 Msa1361350:intron 40.0%
CTAGCCAAAAACAACGTGTT+TGG - tig0017492:22898-22917 None:intergenic 40.0%
TTTGATATATCTGCCTGTGC+TGG + tig0017492:23146-23165 Msa1361350:three_prime_UTR 40.0%
CTGGAAAAATGAGTCAGTCA+AGG + tig0017492:23165-23184 Msa1361350:three_prime_UTR 40.0%
!! AACCACCTTTCTAAAGCGAT+GGG + tig0017492:23309-23328 Msa1361350:three_prime_UTR 40.0%
!! CTATTCCCATCGCTTTAGAA+AGG - tig0017492:23317-23336 None:intergenic 40.0%
!! CTTTCTAAAGCGATGGGAAT+AGG + tig0017492:23315-23334 Msa1361350:three_prime_UTR 40.0%
TAAAGCGATGGGAATAGGAT+AGG + tig0017492:23320-23339 Msa1361350:three_prime_UTR 40.0%
ATACACTTAATAACAGGCCC+AGG - tig0017492:23365-23384 None:intergenic 40.0%
! AGAGGAAGCGTACATATCAG+CGG - tig0017492:19518-19537 None:intergenic 45.0%
AGTGAAGAGGGTTTGAAGAG+AGG - tig0017492:19536-19555 None:intergenic 45.0%
GAGAGAAAGGTCAAATCCAG+AGG + tig0017492:20061-20080 Msa1361350:CDS 45.0%
AGGGAGCTTCAAACTGCTTT+AGG + tig0017492:20101-20120 Msa1361350:CDS 45.0%
GGTTGTCATCACCAAGATGT+CGG - tig0017492:20337-20356 None:intergenic 45.0%
TATAAACTGCCTGTGCCTAG+TGG - tig0017492:20363-20382 None:intergenic 45.0%
CTGCTTCAACCTGGGAAATT+TGG - tig0017492:20400-20419 None:intergenic 45.0%
TCCAAATTTACCCACCGAAG+GGG - tig0017492:20458-20477 None:intergenic 45.0%
GTCCAAATTTACCCACCGAA+GGG - tig0017492:20459-20478 None:intergenic 45.0%
CAACCAGTACAAGGAAGACA+TGG + tig0017492:20777-20796 Msa1361350:CDS 45.0%
ACTCCATGTCTTCCTTGTAC+TGG - tig0017492:20783-20802 None:intergenic 45.0%
AAAGCAGCATGATTAGGTGG+AGG - tig0017492:20806-20825 None:intergenic 45.0%
AAGGATCCAAACCTCTCTTC+TGG + tig0017492:20900-20919 Msa1361350:CDS 45.0%
GAACATATGAACAGCTCGCA+TGG - tig0017492:20954-20973 None:intergenic 45.0%
ATCTGCACCTGTTCTTATGG+AGG + tig0017492:21596-21615 Msa1361350:three_prime_UTR 45.0%
GGTTTGCGTTTGCATGATTG+AGG + tig0017492:21640-21659 Msa1361350:three_prime_UTR 45.0%
! GCATGCTGCCAATCATGTTT+TGG + tig0017492:21702-21721 Msa1361350:three_prime_UTR 45.0%
AGTCCACAACAATCCATCTG+AGG - tig0017492:22127-22146 None:intergenic 45.0%
!! AGATGGATTGTTGTGGACTG+TGG + tig0017492:22128-22147 Msa1361350:three_prime_UTR 45.0%
! GATTGTTGTGGACTGTGGTT+TGG + tig0017492:22133-22152 Msa1361350:three_prime_UTR 45.0%
! TACTTTTGGGCAGCAGATGA+AGG - tig0017492:22188-22207 None:intergenic 45.0%
TCTCAGAAGCCAAACCAAAC+AGG + tig0017492:22964-22983 Msa1361350:intron 45.0%
! AAGTTTTCTACGGGCCTGTT+TGG - tig0017492:22981-23000 None:intergenic 45.0%
!! CTGACTCATTTTTCCAGCAC+AGG - tig0017492:23162-23181 None:intergenic 45.0%
!! CATCGCTTTAGAAAGGTGGT+TGG - tig0017492:23310-23329 None:intergenic 45.0%
!! CAACCACCTTTCTAAAGCGA+TGG + tig0017492:23308-23327 Msa1361350:three_prime_UTR 45.0%
!! TTCCCATCGCTTTAGAAAGG+TGG - tig0017492:23314-23333 None:intergenic 45.0%
TGGAATCAGCATACAGGGCA+TGG + tig0017492:20027-20046 Msa1361350:CDS 50.0%
CCTCAGATCTGCTTCAACCT+GGG - tig0017492:20408-20427 None:intergenic 50.0%
! CCAGGTTGAAGCAGATCTGA+GGG + tig0017492:20406-20425 Msa1361350:CDS 50.0%
AGGATGGTAAGCAACCCCTT+CGG + tig0017492:20441-20460 Msa1361350:CDS 50.0%
ACCCCTTCGGTGGGTAAATT+TGG + tig0017492:20454-20473 Msa1361350:CDS 50.0%
CGTCCAAATTTACCCACCGA+AGG - tig0017492:20460-20479 None:intergenic 50.0%
AGTGCTTTGCACAGTCTCAC+AGG - tig0017492:20522-20541 None:intergenic 50.0%
GATGCCACCCCTAAAGAGAA+AGG + tig0017492:20881-20900 Msa1361350:CDS 50.0%
! GGATCCTTTCTCTTTAGGGG+TGG - tig0017492:20888-20907 None:intergenic 50.0%
CTCGTAAGCTTCGCCTTGTA+AGG - tig0017492:21095-21114 None:intergenic 50.0%
AAGGACTTCGAAGCTGTCGT+TGG - tig0017492:21158-21177 None:intergenic 50.0%
AGTCCTTTGCATCTGCGACA+TGG + tig0017492:21171-21190 Msa1361350:CDS 50.0%
GATCTCGCCTCCATAAGAAC+AGG - tig0017492:21606-21625 None:intergenic 50.0%
! TCTAGGATGTAGTGCCCGTT+TGG + tig0017492:22494-22513 Msa1361350:intron 50.0%
TTCTACGGGCCTGTTTGGTT+TGG - tig0017492:22976-22995 None:intergenic 50.0%
TTCCACACGCTACACATGTG+GGG - tig0017492:23268-23287 None:intergenic 50.0%
CTTCCACACGCTACACATGT+GGG - tig0017492:23269-23288 None:intergenic 50.0%
TGCTTTCTTCTCTGCAGCCG+AGG + tig0017492:19480-19499 Msa1361350:CDS 55.0%
TTTCTTCTCTGCAGCCGAGG+AGG + tig0017492:19483-19502 Msa1361350:CDS 55.0%
! AGCGGATTCCTGAACCTCCT+CGG - tig0017492:19500-19519 None:intergenic 55.0%
GGGCTAAGCTACCGACATCT+TGG + tig0017492:20323-20342 Msa1361350:CDS 55.0%
GTGATGACAACCGAGCCACT+AGG + tig0017492:20345-20364 Msa1361350:CDS 55.0%
! CCCAGGTTGAAGCAGATCTG+AGG + tig0017492:20405-20424 Msa1361350:CDS 55.0%
CCCTCAGATCTGCTTCAACC+TGG - tig0017492:20409-20428 None:intergenic 55.0%
ATGGTAAGCAACCCCTTCGG+TGG + tig0017492:20444-20463 Msa1361350:CDS 55.0%
TGGTAAGCAACCCCTTCGGT+GGG + tig0017492:20445-20464 Msa1361350:CDS 55.0%
TTACATAGAGGGCCGAAGCC+CGG + tig0017492:21948-21967 Msa1361350:three_prime_UTR 55.0%
CAGGGCTCTCCTTGTTCTGA+TGG + tig0017492:23098-23117 Msa1361350:three_prime_UTR 55.0%
TCCACACGCTACACATGTGG+GGG - tig0017492:23267-23286 None:intergenic 55.0%
GCTTCCACACGCTACACATG+TGG - tig0017492:23270-23289 None:intergenic 55.0%
ACAACCGAGCCACTAGGCAC+AGG + tig0017492:20351-20370 Msa1361350:CDS 60.0%
ACTGCCTGTGCCTAGTGGCT+CGG - tig0017492:20358-20377 None:intergenic 60.0%
TGAACAGCTCGCATGGCCTG+AGG - tig0017492:20947-20966 None:intergenic 60.0%
CGGCCATGTCGCAGATGCAA+AGG - tig0017492:21177-21196 None:intergenic 60.0%
TCCCCCACATGTGTAGCGTG+TGG + tig0017492:23263-23282 Msa1361350:three_prime_UTR 60.0%
CTCTGCAGCCGAGGAGGTTC+AGG + tig0017492:19489-19508 Msa1361350:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0017492 gene 19185 23530 19185 ID=Msa1361350;Name=Msa1361350
tig0017492 mRNA 19185 23530 19185 ID=Msa1361350-mRNA-1;Parent=Msa1361350;Name=Msa1361350-mRNA-1;_AED=0.04;_eAED=0.04;_QI=257|1|1|1|0.75|0.6|5|1773|338
tig0017492 exon 19185 19524 19185 ID=Msa1361350-mRNA-1:exon:12359;Parent=Msa1361350-mRNA-1
tig0017492 exon 20025 20139 20025 ID=Msa1361350-mRNA-1:exon:12360;Parent=Msa1361350-mRNA-1
tig0017492 exon 20299 20979 20299 ID=Msa1361350-mRNA-1:exon:12361;Parent=Msa1361350-mRNA-1
tig0017492 exon 21132 22501 21132 ID=Msa1361350-mRNA-1:exon:12362;Parent=Msa1361350-mRNA-1
tig0017492 exon 22990 23530 22990 ID=Msa1361350-mRNA-1:exon:12363;Parent=Msa1361350-mRNA-1
tig0017492 five_prime_UTR 19185 19441 19185 ID=Msa1361350-mRNA-1:five_prime_utr;Parent=Msa1361350-mRNA-1
tig0017492 CDS 19442 19524 19442 ID=Msa1361350-mRNA-1:cds;Parent=Msa1361350-mRNA-1
tig0017492 CDS 20025 20139 20025 ID=Msa1361350-mRNA-1:cds;Parent=Msa1361350-mRNA-1
tig0017492 CDS 20299 20979 20299 ID=Msa1361350-mRNA-1:cds;Parent=Msa1361350-mRNA-1
tig0017492 CDS 21132 21269 21132 ID=Msa1361350-mRNA-1:cds;Parent=Msa1361350-mRNA-1
tig0017492 three_prime_UTR 21270 22501 21270 ID=Msa1361350-mRNA-1:three_prime_utr;Parent=Msa1361350-mRNA-1
tig0017492 three_prime_UTR 22990 23530 22990 ID=Msa1361350-mRNA-1:three_prime_utr;Parent=Msa1361350-mRNA-1
Gene Sequence

>Msa1361350

ATGTTGGTAGCTAATAGTTTCGATCTATGGCGAAAAGATGCTTTCTTCTCTGCAGCCGAGGAGGTTCAGGAATCCGCTGATATAATGGAATCAGCATACAGGGCATGGTTAAGAGAGAAGAGAGAAAGGTCAAATCCAGAGGAATTAAATGAATTATGCAGGGAGCTTCAAACTGCTTTAGGTACTGCTAAATGGCAGTTGGAAGAATTGGAAAAAGCTATTGGGCTAAGCTACCGACATCTTGGTGATGACAACCGAGCCACTAGGCACAGGCAGTTTATATCTGCCATTGAAAGCCAAATTTCCCAGGTTGAAGCAGATCTGAGGGAATCTAATATTGAGGATGGTAAGCAACCCCTTCGGTGGGTAAATTTGGACGAAGAAGAGCGAGATGATTTTGCTGCGTTTCTATCTGGAACCTGTGAGACTGTGCAAAGCACTAAAGATGAATGTGTGGATGTTTCTACTTTGACGAAAACCTCAATTCGGGAGAAACAAGTTAGCAAAGAAGATGATAATGTGAATGTAAATGCTTTTTACCGTTGGGATGGTTCTACTAATGAAAAGGCTTCTGTGGATGCTATTGCTGTTAACAAAGACAGAGATTATGCAATAGAAATAAAAGCAGATGTCGATTCTAGAAATAGTGATGATGTAGTTTATCAAACAGATACAACAACCAGTACAAGGAAGACATGGAGTCCTCCACCTAATCATGCTGCTTTAAGAATTGTAATTGCTGATGAAGATGAGCAGGGAAATCAACTTACACGAACTGTTGATGCCACCCCTAAAGAGAAAGGATCCAAACCTCTCTTCTGGAAACAAAAATTCGAAGAATATCCTCAGGCCATGCGAGCTGTTCATATGTTCAATCAGATTTTTGGTCACATTGGTCTATGCCAACGACAGCTTCGAAGTCCTTTGCATCTGCGACATGGCCGTTCTCTTAAAGTTACACTTGCTCTAATGATGATCATTTTTCTACTTGGTAAGCTTTCAGTTTCCTGCTCCTAA
Protein sequence

>Msa1361350

MLVANSFDLWRKDAFFSAAEEVQESADIMESAYRAWLREKRERSNPEELNELCRELQTALGTAKWQLEELEKAIGLSYRHLGDDNRATRHRQFISAIESQISQVEADLRESNIEDGKQPLRWVNLDEEERDDFAAFLSGTCETVQSTKDECVDVSTLTKTSIREKQVSKEDDNVNVNAFYRWDGSTNEKASVDAIAVNKDRDYAIEIKADVDSRNSDDVVYQTDTTTSTRKTWSPPPNHAALRIVIADEDEQGNQLTRTVDATPKEKGSKPLFWKQKFEEYPQAMRAVHMFNQIFGHIGLCQRQLRSPLHLRHGRSLKVTLALMMIIFLLGKLSVSCS*