AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1366290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1366290 MtrunA17_Chr1g0187571 98.922 464 5 0 1 464 1 464 0.0 945
Msa1366290 MtrunA17_Chr1g0166821 86.452 465 55 3 1 464 1 458 0.0 768
Msa1366290 MtrunA17_Chr7g0261501 76.840 462 101 5 2 458 1 461 0.0 703
Msa1366290 MtrunA17_Chr1g0183631 72.451 461 114 8 2 458 1 452 0.0 671
Msa1366290 MtrunA17_Chr2g0329981 60.421 475 171 7 2 462 1 472 0.0 545
Msa1366290 MtrunA17_Chr8g0342821 59.916 479 158 9 2 458 1 467 0.0 536
Msa1366290 MtrunA17_Chr4g0071031 77.143 315 68 2 2 316 1 311 0.0 531
Msa1366290 MtrunA17_Chr1g0167261 71.545 369 73 4 1 366 1 340 0.0 524
Msa1366290 MtrunA17_Chr8g0390211 59.954 432 150 7 2 423 1 419 1.31e-179 509
Msa1366290 MtrunA17_Chr6g0486611 60.373 429 148 8 2 420 1 417 2.72e-179 508
Msa1366290 MtrunA17_Chr2g0299661 59.712 417 149 7 2 417 1 399 1.41e-173 495
Msa1366290 MtrunA17_Chr1g0146151 66.242 314 106 0 2 315 1 314 1.09e-160 461
Msa1366290 MtrunA17_Chr3g0140071 54.005 437 178 5 2 422 1 430 8.31e-160 459
Msa1366290 MtrunA17_Chr7g0214531 39.100 289 157 6 6 278 31 316 1.66e-58 202
Msa1366290 MtrunA17_Chr3g0140431 39.068 279 157 6 6 274 32 307 3.25e-56 196
Msa1366290 MtrunA17_Chr1g0146301 37.993 279 160 6 6 274 118 393 2.92e-55 195
Msa1366290 MtrunA17_Chr1g0213321 37.676 284 163 6 6 278 113 393 1.35e-54 193
Msa1366290 MtrunA17_Chr7g0253211 37.943 282 159 5 10 278 324 602 2.45e-53 192
Msa1366290 MtrunA17_Chr8g0340491 36.879 282 156 6 10 274 128 404 8.76e-50 180
Msa1366290 MtrunA17_Chr5g0405421 25.455 220 147 6 9 220 98 308 4.85e-13 71.2
Msa1366290 MtrunA17_Chr7g0245031 32.857 140 80 4 108 247 250 375 2.19e-12 68.9
Msa1366290 MtrunA17_Chr4g0072831 30.065 153 75 5 8 154 8 134 8.75e-12 66.2
Msa1366290 MtrunA17_Chr7g0267751 27.189 217 134 9 10 216 135 337 2.07e-11 66.2
Msa1366290 MtrunA17_Chr4g0075541 26.241 282 178 10 12 282 89 351 2.50e-11 65.1
Msa1366290 MtrunA17_Chr7g0267771 27.064 218 133 7 10 216 88 290 2.52e-11 65.5
Msa1366290 MtrunA17_Chr1g0203881 24.809 262 167 8 9 251 40 290 3.01e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1366290 AT3G23340.1 75.862 464 89 6 2 464 1 442 0.0 713
Msa1366290 AT4G14340.1 74.249 466 101 5 2 464 7 456 0.0 710
Msa1366290 AT4G28540.1 73.950 476 102 9 2 458 5 477 0.0 687
Msa1366290 AT5G43320.1 71.933 481 116 8 2 464 1 480 0.0 686
Msa1366290 AT3G23340.2 73.276 464 87 7 2 464 1 428 0.0 679
Msa1366290 AT1G04440.1 71.338 471 124 7 2 464 1 468 0.0 664
Msa1366290 AT1G03930.1 73.093 472 109 4 2 458 1 469 0.0 657
Msa1366290 AT5G44100.1 72.479 476 110 6 2 458 1 474 0.0 628
Msa1366290 AT5G44100.2 72.479 476 110 6 2 458 1 474 0.0 628
Msa1366290 AT4G14340.2 84.404 327 50 1 2 327 7 333 0.0 597
Msa1366290 AT5G43320.2 80.655 336 54 2 2 329 1 333 0.0 567
Msa1366290 AT5G43320.3 80.655 336 54 2 2 329 1 333 0.0 567
Msa1366290 AT1G72710.1 69.474 380 106 4 2 374 1 377 0.0 544
Msa1366290 AT4G26100.1 63.158 437 146 9 2 433 1 427 0.0 532
Msa1366290 AT5G57015.1 72.619 336 87 3 2 337 1 331 0.0 521
Msa1366290 AT2G19470.1 74.839 310 75 1 2 311 1 307 0.0 517
Msa1366290 AT4G28880.3 60.386 414 139 6 2 395 1 409 2.60e-176 500
Msa1366290 AT4G28880.2 60.386 414 139 6 2 395 1 409 2.60e-176 500
Msa1366290 AT4G28880.1 60.386 414 139 6 2 395 1 409 2.60e-176 500
Msa1366290 AT4G28880.4 60.386 414 139 6 2 395 1 409 2.60e-176 500
Msa1366290 AT4G28860.2 70.717 321 89 2 2 322 1 316 6.79e-175 495
Msa1366290 AT4G28860.1 70.717 321 89 2 2 322 1 316 3.41e-174 495
Msa1366290 AT4G08800.1 64.430 298 74 2 2 299 1 266 2.86e-143 411
Msa1366290 AT2G25760.2 40.000 280 153 4 10 274 107 386 4.02e-60 209
Msa1366290 AT2G25760.1 39.643 280 151 5 10 274 107 383 2.14e-57 201
Msa1366290 AT3G13670.1 36.678 289 164 6 6 278 131 416 2.17e-54 193
Msa1366290 AT5G18190.2 37.234 282 161 5 10 278 130 408 4.54e-54 192
Msa1366290 AT5G18190.1 37.234 282 161 5 10 278 130 408 4.54e-54 192
Msa1366290 AT3G03940.1 37.234 282 161 5 10 278 140 418 4.79e-54 192
Msa1366290 AT3G06030.1 25.926 216 141 5 9 214 67 273 1.20e-12 70.5
Msa1366290 AT2G38910.1 26.667 285 156 10 2 246 119 390 3.86e-12 68.9
Msa1366290 AT3G50530.1 26.872 227 143 7 6 220 144 359 4.05e-12 68.9
Msa1366290 AT1G09000.1 25.581 215 141 4 10 214 69 274 3.69e-11 65.9
Msa1366290 AT5G39440.1 27.354 223 147 6 10 228 19 230 3.77e-11 65.5
Msa1366290 AT2G17890.1 23.423 222 149 7 9 220 107 317 4.26e-11 65.5
Msa1366290 AT1G09000.2 25.581 215 141 4 10 214 69 274 8.40e-11 64.7
Msa1366290 AT1G30270.1 28.049 246 139 12 8 237 29 252 8.74e-11 64.3

Find 183 sgRNAs with CRISPR-Local

Find 467 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGGATTGGTGTTGGGTTT+TGG 0.197653 tig0018446:+153649 None:intergenic
TCATTTAATAATCGTGCTTC+TGG 0.214021 tig0018446:-147492 Msa1366290:CDS
GACTCCTCTTATATCTCTTT+TGG 0.225564 tig0018446:-147232 Msa1366290:three_prime_UTR
CTGGGAAAATTTCGGGATTC+CGG 0.230740 tig0018446:+153703 None:intergenic
AAAATTGCTATGTAAGTTTC+TGG 0.243029 tig0018446:-147062 Msa1366290:three_prime_UTR
TGTCACTTGGCACTGGAAAA+AGG 0.247125 tig0018446:-147425 Msa1366290:CDS
TTTGAAATTTAGCTTGAATT+AGG 0.260045 tig0018446:-153209 Msa1366290:five_prime_UTR
TTTAGAAATTTGTTAATATA+TGG 0.266874 tig0018446:-147151 Msa1366290:three_prime_UTR
CGGGTATTCCCCATTTAAAA+TGG 0.292102 tig0018446:-151747 Msa1366290:CDS
GCTTGATAAGACAGGTCTTT+TGG 0.292884 tig0018446:+147632 None:intergenic
TTTCTCTCTGTTCTGTTTGT+GGG 0.298944 tig0018446:-153392 Msa1366290:five_prime_UTR
ATTATTAAATGATGATGATT+TGG 0.313853 tig0018446:+147503 None:intergenic
TTCAAGCTCGGAAGGAAAAT+TGG 0.317743 tig0018446:-153144 Msa1366290:CDS
TTGAGTCGATGAAGTGGAAT+TGG 0.320093 tig0018446:+153589 None:intergenic
GTGATGATGGATCATGTAAT+TGG 0.322381 tig0018446:-153174 Msa1366290:CDS
CTTGGTTCACCAGAAGAGTT+TGG 0.328063 tig0018446:+147603 None:intergenic
TGAGTCGATGAAGTGGAATT+GGG 0.330154 tig0018446:+153590 None:intergenic
CACAAATTGGATCTAGTTCC+AGG 0.331261 tig0018446:-148382 Msa1366290:CDS
TGGGAAAATTTCGGGATTCC+GGG 0.335282 tig0018446:+153704 None:intergenic
AAAATTGGTGGTGGGTCATT+TGG 0.338722 tig0018446:-153129 Msa1366290:CDS
AGCAGCCGTCCAAACTCTTC+TGG 0.341980 tig0018446:-147612 Msa1366290:CDS
TAAGATTGTGCTGGAAATAT+AGG 0.343670 tig0018446:-153288 Msa1366290:five_prime_UTR
AGAGGAAGTTGCTCTTAAAT+TGG 0.345528 tig0018446:-152969 Msa1366290:intron
TTTAACCTTCTCGGATGAAT+AGG 0.346286 tig0018446:+148518 None:intergenic
GATGTGGAAAGAACAGAAAA+TGG 0.354567 tig0018446:+153802 None:intergenic
TCATAAAGAAATTCCTTGAA+TGG 0.354599 tig0018446:+147268 None:intergenic
TAGATTCTCGGGTGCAGTTC+AGG 0.359219 tig0018446:-147895 Msa1366290:CDS
ATTCCCCATTTAAAATGGTT+TGG 0.360672 tig0018446:-151742 Msa1366290:CDS
GAATTCAAATTTAACCTTCT+CGG 0.361148 tig0018446:+148509 None:intergenic
ATATTGAAGTATCCACAAAT+TGG 0.362130 tig0018446:-148395 Msa1366290:CDS
AATAGTGTGGAAAGAGGATA+TGG 0.362313 tig0018446:+153631 None:intergenic
CATTTAATAATCGTGCTTCT+GGG 0.365719 tig0018446:-147491 Msa1366290:CDS
GAGAGAGTAGAACGGCCTTC+AGG 0.366937 tig0018446:-148200 Msa1366290:intron
ACTTGTTTAACTATTGCAAT+AGG 0.374193 tig0018446:-151663 Msa1366290:CDS
TTCAGGTGGACCAGAGATTC+GGG 0.376581 tig0018446:-147919 Msa1366290:intron
TGACCTCCTTGGACCAAGTC+TGG 0.378575 tig0018446:-151689 Msa1366290:CDS
TTTCAGGTGGACCAGAGATT+CGG 0.384714 tig0018446:-147920 Msa1366290:intron
TTTAGCTTGAATTAGGAGAT+TGG 0.391245 tig0018446:-153202 Msa1366290:five_prime_UTR
GCGGGTTATAATACCTCTAT+AGG 0.393119 tig0018446:+148775 None:intergenic
TATGTTCTAGTGTACATTCA+TGG 0.401338 tig0018446:-147007 Msa1366290:three_prime_UTR
GTCATAAATCCAGGACAATC+AGG 0.401717 tig0018446:-148224 Msa1366290:CDS
ACTCTCTCTCCTGATTGTCC+TGG 0.401749 tig0018446:+148215 None:intergenic
GTACATTCATGGAATGGAAT+TGG 0.404103 tig0018446:-146996 Msa1366290:three_prime_UTR
AGTTTGATTATGTGTTTGAT+TGG 0.406009 tig0018446:-148421 Msa1366290:CDS
TGGAATGGAATTGGCGAGTA+AGG 0.413433 tig0018446:-146987 Msa1366290:three_prime_UTR
AGAGGATATGGATTGGTGTT+GGG 0.415851 tig0018446:+153643 None:intergenic
ACAAAGCAGAAGAGATGATC+TGG 0.417037 tig0018446:-148992 Msa1366290:CDS
AAATTGTACATGCTTCTTCA+AGG 0.419496 tig0018446:-151931 Msa1366290:CDS
GGAATTGGCGAGTAAGGATT+GGG 0.419680 tig0018446:-146981 Msa1366290:three_prime_UTR
ATTTCTTTATGAAGAAGCTT+TGG 0.421445 tig0018446:-147257 Msa1366290:three_prime_UTR
TTTAGGACGCAAAGCAAATC+AGG 0.425650 tig0018446:-151439 Msa1366290:intron
TTTATGACTGGTTTCCCACT+TGG 0.426175 tig0018446:+148239 None:intergenic
AAAATAGGTAAAATATGAAA+AGG 0.427523 tig0018446:+153543 None:intergenic
TTTAAAATGGTTTGGAGTTG+AGG 0.433665 tig0018446:-151734 Msa1366290:CDS
GTCATTTGGAGAGCTCTACT+TGG 0.434739 tig0018446:-153115 Msa1366290:CDS
TTAGCTTGAATTAGGAGATT+GGG 0.435311 tig0018446:-153201 Msa1366290:five_prime_UTR
CATCCATGCTGAAATATTCA+TGG 0.435352 tig0018446:+147202 None:intergenic
ACAAATTGATGATTTGTTCA+AGG 0.437148 tig0018446:+146939 None:intergenic
GATTGTCCTGGATTTATGAC+TGG 0.439156 tig0018446:+148227 None:intergenic
TTAAAATGGTTTGGAGTTGA+GGG 0.440355 tig0018446:-151733 Msa1366290:CDS
GTAGTGAAGTTGAGGATGTT+TGG 0.441312 tig0018446:+151960 None:intergenic
CGGCTAGAGCGGCTTTCACT+TGG 0.441375 tig0018446:+147585 None:intergenic
GTGTGCATGGTGATCATTCC+AGG 0.443890 tig0018446:-147842 Msa1366290:CDS
AACTGTTTCCCAGTCTCCCT+TGG 0.448040 tig0018446:-148864 Msa1366290:intron
GCAAGTGTTAATACTCATCT+AGG 0.449215 tig0018446:-149127 Msa1366290:CDS
CAGGTATACATAATTGATTA+CGG 0.449576 tig0018446:-149792 Msa1366290:CDS
ACATGTTGTCTCTTCGTGAA+TGG 0.449603 tig0018446:+147176 None:intergenic
ACCGCAACGATCGGCAGTAA+TGG 0.450799 tig0018446:+148587 None:intergenic
TCAGGTGTTAATGTACAAAC+TGG 0.455615 tig0018446:-152992 Msa1366290:intron
TGGAATTGGCGAGTAAGGAT+TGG 0.457588 tig0018446:-146982 Msa1366290:three_prime_UTR
TCCAATGTTGGGTCCATTCA+AGG 0.462914 tig0018446:-147281 Msa1366290:three_prime_UTR
TAAAGTACTCACCCGGGCCC+TGG 0.463637 tig0018446:+148364 None:intergenic
TGCTACTGCTCAAGAGCAAT+CGG 0.463680 tig0018446:+147565 None:intergenic
CATGTTGTCTCTTCGTGAAT+GGG 0.465371 tig0018446:+147177 None:intergenic
TGAGGATGTTTGGTCTTCAC+AGG 0.466320 tig0018446:+151970 None:intergenic
CATGAATATTTCAGCATGGA+TGG 0.469973 tig0018446:-147201 Msa1366290:three_prime_UTR
AGAGATTCGGGATAGATTCT+CGG 0.471393 tig0018446:-147907 Msa1366290:CDS
AATTTCGGGATTCCGGGAAA+AGG 0.474919 tig0018446:+153710 None:intergenic
GAGAATCTATCCCGAATCTC+TGG 0.479581 tig0018446:+147909 None:intergenic
AACACCAAAAGAGATATAAG+AGG 0.479596 tig0018446:+147228 None:intergenic
TTAAACAAGTCTTCCAGACT+TGG 0.485095 tig0018446:+151676 None:intergenic
GAACTCCTGTCACTTGGCAC+TGG 0.485260 tig0018446:-147432 Msa1366290:CDS
TTGGATCTAGTTCCAGGGCC+CGG 0.486826 tig0018446:-148376 Msa1366290:CDS
CCTTGGCAAGGTTTGAAAGC+TGG 0.488040 tig0018446:-148847 Msa1366290:CDS
CAGGCATTTGCAAGAAGGAA+TGG 0.490425 tig0018446:-147876 Msa1366290:CDS
AAGAGGATATGGATTGGTGT+TGG 0.492124 tig0018446:+153642 None:intergenic
TGGATCTAGTTCCAGGGCCC+GGG 0.493698 tig0018446:-148375 Msa1366290:intron
AGCTTTGAACTCCTGTCACT+TGG 0.494711 tig0018446:-147438 Msa1366290:CDS
CTCTTGAGATACGAATAATC+AGG 0.495706 tig0018446:+148553 None:intergenic
CAGTTCAGGCATTTGCAAGA+AGG 0.496735 tig0018446:-147881 Msa1366290:CDS
TTTCCCAGTCTCCCTTGGCA+AGG 0.501011 tig0018446:-148859 Msa1366290:intron
GAAGATGCTTACTCCTATAG+AGG 0.503426 tig0018446:-148788 Msa1366290:intron
GAGTATTAACACTTGCATAC+CGG 0.504831 tig0018446:+149134 None:intergenic
GAGATTCGGGATAGATTCTC+GGG 0.507677 tig0018446:-147906 Msa1366290:CDS
AAAAGTTGTGATGTGAAGTC+AGG 0.509486 tig0018446:+153767 None:intergenic
CTGGAACTAGATCCAATTTG+TGG 0.509685 tig0018446:+148383 None:intergenic
AAATAGGTAAAATATGAAAA+GGG 0.510670 tig0018446:+153544 None:intergenic
CTCATCTGAAGATCTATGCC+TGG 0.513835 tig0018446:+147824 None:intergenic
TGGATCTGTCTTTGAGGACA+AGG 0.515041 tig0018446:+153669 None:intergenic
AATTGTACATGCTTCTTCAA+GGG 0.515160 tig0018446:-151930 Msa1366290:CDS
TTTGCAAGAAGGAATGGATC+TGG 0.516230 tig0018446:-147870 Msa1366290:CDS
AAACAAACATGGTACCTGTA+TGG 0.519200 tig0018446:+149726 None:intergenic
CTAACCACGTCTTTAGAAGA+TGG 0.525542 tig0018446:+147801 None:intergenic
TTAAATTTGAGTCGATGAAG+TGG 0.529967 tig0018446:+153583 None:intergenic
TTTGACTCGTAGTGAAGTTG+AGG 0.532224 tig0018446:+151952 None:intergenic
CCAGCTTTCAAACCTTGCCA+AGG 0.533106 tig0018446:+148847 None:intergenic
TCCTTGAATGGACCCAACAT+TGG 0.534362 tig0018446:+147280 None:intergenic
GTTAATACTCATCTAGGAGT+TGG 0.534550 tig0018446:-149121 Msa1366290:intron
AGTATTAACACTTGCATACC+GGG 0.534714 tig0018446:+149135 None:intergenic
GGGAAACCAGTCATAAATCC+AGG 0.534889 tig0018446:-148233 Msa1366290:CDS
TCCATTACTGCCGATCGTTG+CGG 0.536213 tig0018446:-148588 Msa1366290:CDS
TGAATGGACCCAACATTGGA+TGG 0.539367 tig0018446:+147284 None:intergenic
TCATTTGGAGAGCTCTACTT+GGG 0.539914 tig0018446:-153114 Msa1366290:intron
GGACGGCTGCTTGATAAGAC+AGG 0.541596 tig0018446:+147624 None:intergenic
CACACAAGCATATACCATAC+AGG 0.541677 tig0018446:-149740 Msa1366290:intron
CTCGGAAGGAAAATTGGTGG+TGG 0.543152 tig0018446:-153138 Msa1366290:CDS
CAGCTTTCAAACCTTGCCAA+GGG 0.543251 tig0018446:+148848 None:intergenic
TATCTTCAAACCGCAACGAT+CGG 0.543597 tig0018446:+148578 None:intergenic
CGTGACCTATTCATCCGAGA+AGG 0.545158 tig0018446:-148523 Msa1366290:intron
TTTGTGCAAGGCACATCCGT+TGG 0.545816 tig0018446:-148626 Msa1366290:CDS
GGCTGCTTGTAATAATTACA+TGG 0.548094 tig0018446:-147130 Msa1366290:three_prime_UTR
GATTTGTTCAAGGAGAAGAT+TGG 0.550673 tig0018446:+146949 None:intergenic
GCCATGGCAATTGACCTCCT+TGG 0.551055 tig0018446:-151700 Msa1366290:CDS
CTTGAGTCAAGCAAGGGTCA+TGG 0.555144 tig0018446:-147374 Msa1366290:three_prime_UTR
AGTTGTCAGGCTTTATATCA+CGG 0.558010 tig0018446:+151472 None:intergenic
ATTGTACATGCTTCTTCAAG+GGG 0.562314 tig0018446:-151929 Msa1366290:CDS
CCGGGAAAAGGAAAGAAAAG+TGG 0.562774 tig0018446:+153722 None:intergenic
AAAACCTCACTGGAACTGCC+CGG 0.564841 tig0018446:-149153 Msa1366290:CDS
TCTAGTGTACATTCATGGAA+TGG 0.565103 tig0018446:-147002 Msa1366290:three_prime_UTR
ATAGTGAATAGTGTGGAAAG+AGG 0.572143 tig0018446:+153625 None:intergenic
CAGGTGGGATAGATGAGATG+TGG 0.573028 tig0018446:+153786 None:intergenic
GGATCTGGCCATGGTGTGCA+TGG 0.573110 tig0018446:-147855 Msa1366290:CDS
CGTGCTTCTGGGGCAAGAGG+TGG 0.573464 tig0018446:-147480 Msa1366290:CDS
GTGGAAAATTCAAGCTCGGA+AGG 0.575556 tig0018446:-153152 Msa1366290:CDS
GAGTCGATGAAGTGGAATTG+GGG 0.577689 tig0018446:+153591 None:intergenic
AATTGATGTGTGTAGTAGAG+TGG 0.579591 tig0018446:-153233 Msa1366290:five_prime_UTR
ATTGGTGGAAAATTCAAGCT+CGG 0.586349 tig0018446:-153156 Msa1366290:CDS
AGAGATGATCTGGAATCACT+TGG 0.587254 tig0018446:-148982 Msa1366290:CDS
CTTCCATGAATATTTCAGCA+TGG 0.593378 tig0018446:-147205 Msa1366290:three_prime_UTR
AATCGTGCTTCTGGGGCAAG+AGG 0.593465 tig0018446:-147483 Msa1366290:CDS
GTTCACCAGAAGAGTTTGGA+CGG 0.595743 tig0018446:+147607 None:intergenic
ATTTAATAATCGTGCTTCTG+GGG 0.598016 tig0018446:-147490 Msa1366290:CDS
AGTTGTGATGTGAAGTCAGG+TGG 0.598192 tig0018446:+153770 None:intergenic
TCCAAGGAGGTCAATTGCCA+TGG 0.600545 tig0018446:+151699 None:intergenic
CAGAGCATGAGCAATCAACA+AGG 0.604814 tig0018446:+147315 None:intergenic
CAGGCTTTATATCACGGTGA+AGG 0.608260 tig0018446:+151478 None:intergenic
AATTAAGATAGTGAATAGTG+TGG 0.609487 tig0018446:+153618 None:intergenic
CAGACTTCTTGAGTCAAGCA+AGG 0.611739 tig0018446:-147381 Msa1366290:three_prime_UTR
GCTTGTGTGTGTGAAGATCT+CGG 0.612004 tig0018446:+149754 None:intergenic
AAGTATGATGTAAATTCCAA+CGG 0.613345 tig0018446:+148610 None:intergenic
GTTGTGATGTGAAGTCAGGT+GGG 0.617901 tig0018446:+153771 None:intergenic
AGTCTTCCAGACTTGGTCCA+AGG 0.617923 tig0018446:+151683 None:intergenic
TACACTAGAACATAGTACTC+AGG 0.619256 tig0018446:+147016 None:intergenic
ACAAATTGGATCTAGTTCCA+GGG 0.625877 tig0018446:-148381 Msa1366290:CDS
GTTGAGTACATGCACTCCCG+TGG 0.629864 tig0018446:-151504 Msa1366290:CDS
ATGATGGATCATGTAATTGG+TGG 0.630712 tig0018446:-153171 Msa1366290:CDS
AAGCTCGGAAGGAAAATTGG+TGG 0.634557 tig0018446:-153141 Msa1366290:CDS
TGTGGAAAGAGGATATGGAT+TGG 0.636850 tig0018446:+153636 None:intergenic
TCGGAAGGAAAATTGGTGGT+GGG 0.637716 tig0018446:-153137 Msa1366290:CDS
AGACTTCTTGAGTCAAGCAA+GGG 0.639265 tig0018446:-147380 Msa1366290:three_prime_UTR
AGAAGGAATGGATCTGGCCA+TGG 0.643782 tig0018446:-147864 Msa1366290:CDS
TGAGGGTGACTACAATGCCA+TGG 0.644969 tig0018446:-151716 Msa1366290:CDS
GGTACAAAATATGCATCACA+AGG 0.646634 tig0018446:+147037 None:intergenic
TGTTAATGTACAAACTGGAG+AGG 0.648733 tig0018446:-152987 Msa1366290:CDS
ACTACTCAGAGGACTCAACC+AGG 0.650293 tig0018446:-147534 Msa1366290:CDS
CCGCGTAGCTCTTCTCGTCA+CGG 0.653072 tig0018446:-147663 Msa1366290:CDS
TGTAGCAAGCTGATTCTGAG+AGG 0.654308 tig0018446:-147686 Msa1366290:intron
AATGATCACCATGCACACCA+TGG 0.661002 tig0018446:+147847 None:intergenic
GATGATTTGGACTCAAGACC+TGG 0.661178 tig0018446:+147516 None:intergenic
ATCACGGTGAAGGAAACCAC+GGG 0.662401 tig0018446:+151488 None:intergenic
TCAAGAGCAATCGGCTAGAG+CGG 0.663121 tig0018446:+147574 None:intergenic
AATCAGGAGAGAGAGTAGAA+CGG 0.663172 tig0018446:-148208 Msa1366290:CDS
CATACCGGGCAGTTCCAGTG+AGG 0.669824 tig0018446:+149149 None:intergenic
TATCACGGTGAAGGAAACCA+CGG 0.680680 tig0018446:+151487 None:intergenic
CTTCCAGACTTGGTCCAAGG+AGG 0.681469 tig0018446:+151686 None:intergenic
TTGTACATGCTTCTTCAAGG+GGG 0.696070 tig0018446:-151928 Msa1366290:CDS
GTGGTCGTGATGATACACTC+AGG 0.697269 tig0018446:-147461 Msa1366290:CDS
GAATTGGCGAGTAAGGATTG+GGG 0.697779 tig0018446:-146980 Msa1366290:three_prime_UTR
TGAGCCATCTTCTAAAGACG+TGG 0.710607 tig0018446:-147805 Msa1366290:intron
GCAGACTATCTACTACTCAG+AGG 0.717657 tig0018446:-147545 Msa1366290:CDS
AGAGCATGAGCAATCAACAA+GGG 0.733408 tig0018446:+147316 None:intergenic
GTACAAAATATGCATCACAA+GGG 0.738084 tig0018446:+147038 None:intergenic
CCGTGACGAGAAGAGCTACG+CGG 0.803013 tig0018446:+147663 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTAAATAAACATTAATTT+GGG + tig0018446:150038-150057 None:intergenic 10.0%
!! AAACTAAATAAACATTAATT+TGG + tig0018446:150039-150058 None:intergenic 10.0%
!! TTAAATATTTAAGAAAATAC+AGG + tig0018446:150534-150553 None:intergenic 10.0%
!!! CTTTTTTTATTTTAATAACT+CGG - tig0018446:151761-151780 Msa1366290:intron 10.0%
!!! TTTTTTTATTTTAATAACTC+GGG - tig0018446:151762-151781 Msa1366290:intron 10.0%
!!! TTTAGAAATTTGTTAATATA+TGG - tig0018446:153499-153518 Msa1366290:five_prime_UTR 10.0%
!! AAATAGGTAAAATATGAAAA+GGG + tig0018446:147109-147128 None:intergenic 15.0%
!! AAAATAGGTAAAATATGAAA+AGG + tig0018446:147110-147129 None:intergenic 15.0%
!!! ATAGATGGTTTTTTTTTTTT+TGG - tig0018446:147762-147781 Msa1366290:intron 15.0%
!!! TAAAAATTCCTTTCTTTTAA+AGG + tig0018446:148075-148094 None:intergenic 15.0%
!!! TTAAAAGAAAGGAATTTTTA+AGG - tig0018446:148075-148094 Msa1366290:intron 15.0%
!!! TAAATTTCATTCTTTAGTTT+AGG + tig0018446:149634-149653 None:intergenic 15.0%
!!! TATTATTTAGTTTTGATAGT+TGG - tig0018446:150282-150301 Msa1366290:intron 15.0%
!!! AAATTTTATAAGGATGTAAA+TGG - tig0018446:151238-151257 Msa1366290:intron 15.0%
!!! AATTTTATAAGGATGTAAAT+GGG - tig0018446:151239-151258 Msa1366290:intron 15.0%
!!! ATTATTAAATGATGATGATT+TGG + tig0018446:153150-153169 None:intergenic 15.0%
!!! TTTGAAATTTAGCTTGAATT+AGG - tig0018446:147441-147460 Msa1366290:CDS 20.0%
!!! GTTGCTATATTTTTGTTTAT+TGG - tig0018446:147973-147992 Msa1366290:intron 20.0%
!! TTAGAGACATAACTAATAAA+TGG - tig0018446:148205-148224 Msa1366290:CDS 20.0%
!! TAATAAATGGAAAGATCATA+TGG - tig0018446:148218-148237 Msa1366290:CDS 20.0%
!! AAAGATCAAGCTAATTAAAA+AGG + tig0018446:148480-148499 None:intergenic 20.0%
!!! AGCTTTCTTTTAAAAGTATA+GGG + tig0018446:149080-149099 None:intergenic 20.0%
!!! ATTTTTACTTATAAGCAACT+CGG - tig0018446:149105-149124 Msa1366290:intron 20.0%
!! AAAGTAAATAATCTATCCTA+TGG + tig0018446:149456-149475 None:intergenic 20.0%
!! TAAATAATCCCAATAAATAG+AGG + tig0018446:149557-149576 None:intergenic 20.0%
!! GTGAAAAATATGAAAAGTAA+AGG - tig0018446:149602-149621 Msa1366290:intron 20.0%
!!! ATCCTTCTTTTATAGATTTA+AGG - tig0018446:149917-149936 Msa1366290:intron 20.0%
!! TTCCTTAAATCTATAAAAGA+AGG + tig0018446:149922-149941 None:intergenic 20.0%
!!! TTTTATAGATTTAAGGAATC+AGG - tig0018446:149924-149943 Msa1366290:intron 20.0%
!! TAATTTGGGTATATCAATAT+TGG + tig0018446:150024-150043 None:intergenic 20.0%
!! CAAAAGTAATCATAATATCA+AGG + tig0018446:150219-150238 None:intergenic 20.0%
!!! CTTGATATTATGATTACTTT+TGG - tig0018446:150217-150236 Msa1366290:intron 20.0%
!!! TAGGATTTTTATGAACTAAT+TGG - tig0018446:150336-150355 Msa1366290:intron 20.0%
!!! ATTTTACTACTTTTTCTACT+TGG - tig0018446:150393-150412 Msa1366290:intron 20.0%
!!! TTACTTCCATTTTGATTTTT+AGG - tig0018446:150437-150456 Msa1366290:intron 20.0%
!! AGAATACCTAAAAATCAAAA+TGG + tig0018446:150446-150465 None:intergenic 20.0%
!! GTATTAAAAAAACACTAAGT+TGG - tig0018446:150730-150749 Msa1366290:intron 20.0%
!!! CAATGTTTTTAAACTTCAAA+AGG + tig0018446:151011-151030 None:intergenic 20.0%
!!! AGTTTAAAAACATTGTTTTG+TGG - tig0018446:151016-151035 Msa1366290:intron 20.0%
!!! TTATTTTAACATAAATGAGC+TGG + tig0018446:151112-151131 None:intergenic 20.0%
!! TAATCAAAACAATCACATAA+AGG + tig0018446:151911-151930 None:intergenic 20.0%
!!! TTTTGATTACTAGAATACTT+GGG - tig0018446:151922-151941 Msa1366290:intron 20.0%
!! TTCTTTGCAACATATATAAT+TGG + tig0018446:151977-151996 None:intergenic 20.0%
!!! ATTTTTCCCTCTAATAATAA+TGG - tig0018446:152506-152525 Msa1366290:intron 20.0%
!! AATATGCCATTATTATTAGA+GGG + tig0018446:152515-152534 None:intergenic 20.0%
!! TAAAGTTCTATTGTTCTTTA+TGG - tig0018446:152544-152563 Msa1366290:intron 20.0%
!! TGCTACAAAAATTAAGAATT+AGG + tig0018446:152951-152970 None:intergenic 20.0%
! AATTAAGATAGTGAATAGTG+TGG + tig0018446:147035-147054 None:intergenic 25.0%
!! TCATATTTTACCTATTTTCG+AGG - tig0018446:147112-147131 Msa1366290:three_prime_UTR 25.0%
!!! GTTTTCTTTTTTGAGGTATT+GGG - tig0018446:147280-147299 Msa1366290:three_prime_UTR 25.0%
!! ACACTTTTGTATCTCAATTT+TGG - tig0018446:147336-147355 Msa1366290:three_prime_UTR 25.0%
!!! ACCTTATATATTGTTTTGCT+AGG - tig0018446:147575-147594 Msa1366290:CDS 25.0%
! TCCTAGCAAAACAATATATA+AGG + tig0018446:147579-147598 None:intergenic 25.0%
!!! TGAAGTTATTGACTTCTATT+GGG - tig0018446:147708-147727 Msa1366290:intron 25.0%
! AAACAATATGCATGTCAATA+AGG - tig0018446:147822-147841 Msa1366290:CDS 25.0%
! ATTTGACAATGAAAAACCTA+AGG - tig0018446:148116-148135 Msa1366290:intron 25.0%
! TTTGACAATGAAAAACCTAA+GGG - tig0018446:148117-148136 Msa1366290:intron 25.0%
!!! CTGTTTTTCTATTTTTCCAA+TGG + tig0018446:148366-148385 None:intergenic 25.0%
! AGAAAAACAGAGAAAACAAA+TGG - tig0018446:148376-148395 Msa1366290:CDS 25.0%
! TTGAGGGGAAAAATAATAAA+AGG + tig0018446:148761-148780 None:intergenic 25.0%
!! AACTCCAAACCATTTTAAAT+GGG + tig0018446:148915-148934 None:intergenic 25.0%
! ACTTGTTTAACTATTGCAAT+AGG - tig0018446:148987-149006 Msa1366290:CDS 25.0%
!!! GAGCTTTCTTTTAAAAGTAT+AGG + tig0018446:149081-149100 None:intergenic 25.0%
! AATCACAACTGAAACTAATT+CGG + tig0018446:149314-149333 None:intergenic 25.0%
!!! TCAACTTAATTGATTTGATG+AGG - tig0018446:149366-149385 Msa1366290:intron 25.0%
! GAGATCATTAGGAAATTATT+AGG + tig0018446:149413-149432 None:intergenic 25.0%
!! AAAGTATTAAAGGAAAAGCA+AGG + tig0018446:149508-149527 None:intergenic 25.0%
!! ATTTCATTCTTTAGTTTAGG+AGG + tig0018446:149631-149650 None:intergenic 25.0%
! TATTCTTCCATATATATCGA+GGG + tig0018446:149704-149723 None:intergenic 25.0%
! ATATTCTTCCATATATATCG+AGG + tig0018446:149705-149724 None:intergenic 25.0%
!!! CTAAGATGTTATGTTTTGAA+TGG - tig0018446:149875-149894 Msa1366290:intron 25.0%
!!! ATGTTATGTTTTGAATGGAA+GGG - tig0018446:149880-149899 Msa1366290:intron 25.0%
!!! TATGTGTTTCTGGAAATAAA+AGG + tig0018446:149966-149985 None:intergenic 25.0%
!!! TCTTGCTTTAAGATAGAAAA+TGG + tig0018446:150171-150190 None:intergenic 25.0%
! TATACACAATTCAACTATGT+AGG - tig0018446:150317-150336 Msa1366290:intron 25.0%
!!! GATTTTTAGGTATTCTTTTC+AGG - tig0018446:150450-150469 Msa1366290:intron 25.0%
!!! TTTAACTTGATTTCCAAGAA+TGG + tig0018446:150649-150668 None:intergenic 25.0%
!!! TTCTGTGCTGATTTTTTTTT+TGG - tig0018446:150802-150821 Msa1366290:intron 25.0%
! CAGGTATACATAATTGATTA+CGG - tig0018446:150858-150877 Msa1366290:intron 25.0%
! TTAAACTTCAAAAGGTGAAA+AGG + tig0018446:151003-151022 None:intergenic 25.0%
!!! TAGACTTGATATTCCTTTTT+TGG - tig0018446:151134-151153 Msa1366290:intron 25.0%
! ATCATTATGTATTCAAGACA+AGG + tig0018446:151179-151198 None:intergenic 25.0%
!! CAGACAGGTTAAATTTTATA+AGG - tig0018446:151228-151247 Msa1366290:intron 25.0%
!! CAAGTTTGGGAATATTATTT+TGG + tig0018446:151309-151328 None:intergenic 25.0%
! AACGATAAATAAACAAGTGA+TGG + tig0018446:151392-151411 None:intergenic 25.0%
!!! GTTTTGATTACTAGAATACT+TGG - tig0018446:151921-151940 Msa1366290:intron 25.0%
! AAGTATGATGTAAATTCCAA+CGG + tig0018446:152043-152062 None:intergenic 25.0%
! GAATTCAAATTTAACCTTCT+CGG + tig0018446:152144-152163 None:intergenic 25.0%
! ATTTAGTAATGTTTCTTCAC+AGG - tig0018446:152201-152220 Msa1366290:intron 25.0%
! AGTTTGATTATGTGTTTGAT+TGG - tig0018446:152229-152248 Msa1366290:intron 25.0%
!! ATATTGAAGTATCCACAAAT+TGG - tig0018446:152255-152274 Msa1366290:intron 25.0%
!!! TGTATTTCTAGCAAAACTAA+AGG - tig0018446:152350-152369 Msa1366290:intron 25.0%
! GAATATGCCATTATTATTAG+AGG + tig0018446:152516-152535 None:intergenic 25.0%
! GATTGTTATGCTTATATTTC+AGG - tig0018446:152714-152733 Msa1366290:intron 25.0%
!! TATATTTTCCATCCAATGTT+GGG - tig0018446:153358-153377 Msa1366290:five_prime_UTR 25.0%
! TCATAAAGAAATTCCTTGAA+TGG + tig0018446:153385-153404 None:intergenic 25.0%
! ATTTCTTTATGAAGAAGCTT+TGG - tig0018446:153393-153412 Msa1366290:five_prime_UTR 25.0%
!!! ATTTTTTTCTGCTGAAGAAA+AGG - tig0018446:153546-153565 Msa1366290:five_prime_UTR 25.0%
! AAAATTGCTATGTAAGTTTC+TGG - tig0018446:153588-153607 Msa1366290:five_prime_UTR 25.0%
!!! ACAAATTGATGATTTGTTCA+AGG + tig0018446:153714-153733 None:intergenic 25.0%
!! TTTTTGCTTAAATGCAGTTT+TGG - tig0018446:153746-153765 Msa1366290:five_prime_UTR 25.0%
!!! TTGCAGTTTTAGCAAAATAA+GGG + tig0018446:153774-153793 None:intergenic 25.0%
!!! ATTGCAGTTTTAGCAAAATA+AGG + tig0018446:153775-153794 None:intergenic 25.0%
! AATTTTGCTGGGAAAATTTC+GGG + tig0018446:146957-146976 None:intergenic 30.0%
! GAATTTTGCTGGGAAAATTT+CGG + tig0018446:146958-146977 None:intergenic 30.0%
TTAAATTTGAGTCGATGAAG+TGG + tig0018446:147070-147089 None:intergenic 30.0%
!! TTTGTGGGTTTTCTTTTTTG+AGG - tig0018446:147273-147292 Msa1366290:three_prime_UTR 30.0%
!!! GGTTTTCTTTTTTGAGGTAT+TGG - tig0018446:147279-147298 Msa1366290:three_prime_UTR 30.0%
TAAGATTGTGCTGGAAATAT+AGG - tig0018446:147362-147381 Msa1366290:three_prime_UTR 30.0%
!! TTTAGCTTGAATTAGGAGAT+TGG - tig0018446:147448-147467 Msa1366290:CDS 30.0%
! TTAGCTTGAATTAGGAGATT+GGG - tig0018446:147449-147468 Msa1366290:CDS 30.0%
! TCGTTTTCTATGCTTTTGTT+TGG - tig0018446:147634-147653 Msa1366290:CDS 30.0%
!! GTGAAGTTATTGACTTCTAT+TGG - tig0018446:147707-147726 Msa1366290:intron 30.0%
!!! AGGAATGTTGATTTTTCTAC+TGG - tig0018446:147736-147755 Msa1366290:intron 30.0%
TGGTTACTTGAATTTCAGTT+AGG - tig0018446:147993-148012 Msa1366290:intron 30.0%
! ACATGTTGCCTTTAAAAGAA+AGG - tig0018446:148064-148083 Msa1366290:intron 30.0%
TTTAAGGATAACGATTGAGT+TGG - tig0018446:148091-148110 Msa1366290:intron 30.0%
ATGGCTATAGTATGATCAAA+TGG - tig0018446:148237-148256 Msa1366290:CDS 30.0%
CAGACTATATTTGTAACCAT+TGG - tig0018446:148347-148366 Msa1366290:intron 30.0%
AAGCTAATTAAAAAGGATGC+TGG + tig0018446:148473-148492 None:intergenic 30.0%
! AGCTTGATCTTTTAAACAAC+TGG - tig0018446:148488-148507 Msa1366290:intron 30.0%
TGAATGCAGAAATGAAAATC+TGG + tig0018446:148566-148585 None:intergenic 30.0%
TGACAAACAAAGGAAGAAAA+AGG + tig0018446:148656-148675 None:intergenic 30.0%
!! TTTTTCTTCCTTTGTTTGTC+AGG - tig0018446:148655-148674 Msa1366290:intron 30.0%
AAATTGTACATGCTTCTTCA+AGG - tig0018446:148719-148738 Msa1366290:intron 30.0%
AATTGTACATGCTTCTTCAA+GGG - tig0018446:148720-148739 Msa1366290:intron 30.0%
! ATGAAGAAGCATAATTTGAG+GGG + tig0018446:148776-148795 None:intergenic 30.0%
! GATGAAGAAGCATAATTTGA+GGG + tig0018446:148777-148796 None:intergenic 30.0%
! AGATGAAGAAGCATAATTTG+AGG + tig0018446:148778-148797 None:intergenic 30.0%
!! TTCCTCTTTTCTTTTTGAAG+CGG - tig0018446:148883-148902 Msa1366290:intron 30.0%
! ATTCCCCATTTAAAATGGTT+TGG - tig0018446:148908-148927 Msa1366290:intron 30.0%
! ACTCCAAACCATTTTAAATG+GGG + tig0018446:148914-148933 None:intergenic 30.0%
! CAACTCCAAACCATTTTAAA+TGG + tig0018446:148916-148935 None:intergenic 30.0%
! TTTAAAATGGTTTGGAGTTG+AGG - tig0018446:148916-148935 Msa1366290:intron 30.0%
! TTAAAATGGTTTGGAGTTGA+GGG - tig0018446:148917-148936 Msa1366290:intron 30.0%
! AAAGCCTGACAACTTTTTAA+TGG - tig0018446:149187-149206 Msa1366290:intron 30.0%
! AAGCCTGACAACTTTTTAAT+GGG - tig0018446:149188-149207 Msa1366290:intron 30.0%
AAACCCATTAAAAAGTTGTC+AGG + tig0018446:149194-149213 None:intergenic 30.0%
!!! GACAACTTTTTAATGGGTTT+AGG - tig0018446:149194-149213 Msa1366290:intron 30.0%
ATAATCTATCCTATGGATAG+TGG + tig0018446:149449-149468 None:intergenic 30.0%
TATTAAAGGAAAAGCAAGGT+CGG + tig0018446:149504-149523 None:intergenic 30.0%
! TGGGTGAGATAAAGTATTAA+AGG + tig0018446:149518-149537 None:intergenic 30.0%
AATCGTACTCGTATTTATTG+AGG - tig0018446:149580-149599 Msa1366290:intron 30.0%
! ATCTTTTTGTTAAGATGCCA+TGG + tig0018446:149807-149826 None:intergenic 30.0%
!! GATGTTATGTTTTGAATGGA+AGG - tig0018446:149879-149898 Msa1366290:intron 30.0%
!! TGTTATGTTTTGAATGGAAG+GGG - tig0018446:149881-149900 Msa1366290:intron 30.0%
! AACTGCAATGAAGTTTTACA+TGG + tig0018446:150072-150091 None:intergenic 30.0%
! TTCATGTCTCTAATTTTGAG+AGG - tig0018446:150119-150138 Msa1366290:intron 30.0%
TAATATCAAGGCTGACAAAT+GGG + tig0018446:150207-150226 None:intergenic 30.0%
ATAATATCAAGGCTGACAAA+TGG + tig0018446:150208-150227 None:intergenic 30.0%
! AATTGGACAGTATTTCTACT+AGG - tig0018446:150353-150372 Msa1366290:intron 30.0%
AACAGAACTCAATGAATCAA+AGG + tig0018446:150419-150438 None:intergenic 30.0%
GAATTAGATGTAACTACAGA+AGG + tig0018446:150510-150529 None:intergenic 30.0%
GAATTGAAAAATTGTACTCC+TGG - tig0018446:150564-150583 Msa1366290:intron 30.0%
TTTCCAAGAATGGCTTATTA+TGG + tig0018446:150639-150658 None:intergenic 30.0%
GGAAATCAAGTTAAACATGA+AGG - tig0018446:150654-150673 Msa1366290:intron 30.0%
! TGTTTGAGTCTGAATTTGTT+TGG + tig0018446:150683-150702 None:intergenic 30.0%
! CTAAATTTGTTCCTTGAGTA+CGG - tig0018446:150960-150979 Msa1366290:intron 30.0%
! TAAATTTGTTCCTTGAGTAC+GGG - tig0018446:150961-150980 Msa1366290:intron 30.0%
!!! TATTCCTTTTTTGGATTCCT+TGG - tig0018446:151143-151162 Msa1366290:intron 30.0%
!!! ATTCCTTTTTTGGATTCCTT+GGG - tig0018446:151144-151163 Msa1366290:intron 30.0%
!!! ATTATTTTGGATGCTGATTC+AGG + tig0018446:151296-151315 None:intergenic 30.0%
! TTGTGCTAATCAACTCTTTT+CGG - tig0018446:152374-152393 Msa1366290:intron 30.0%
TGTTATGCTTATATTTCAGG+TGG - tig0018446:152717-152736 Msa1366290:intron 30.0%
!! CCTTCATAACAAAGTTTTGA+AGG + tig0018446:152904-152923 None:intergenic 30.0%
! CCTTCAAAACTTTGTTATGA+AGG - tig0018446:152901-152920 Msa1366290:intron 30.0%
TCATTTAATAATCGTGCTTC+TGG - tig0018446:153158-153177 Msa1366290:CDS 30.0%
CATTTAATAATCGTGCTTCT+GGG - tig0018446:153159-153178 Msa1366290:CDS 30.0%
ATTTAATAATCGTGCTTCTG+GGG - tig0018446:153160-153179 Msa1366290:CDS 30.0%
! GTATATTTTCCATCCAATGT+TGG - tig0018446:153357-153376 Msa1366290:five_prime_UTR 30.0%
AACACCAAAAGAGATATAAG+AGG + tig0018446:153425-153444 None:intergenic 30.0%
GTACAAAATATGCATCACAA+GGG + tig0018446:153615-153634 None:intergenic 30.0%
TATGTTCTAGTGTACATTCA+TGG - tig0018446:153643-153662 Msa1366290:five_prime_UTR 30.0%
!! TGCAGTTTTAGCAAAATAAG+GGG + tig0018446:153773-153792 None:intergenic 30.0%
GATGTGGAAAGAACAGAAAA+TGG + tig0018446:146851-146870 None:intergenic 35.0%
AAAAGTTGTGATGTGAAGTC+AGG + tig0018446:146886-146905 None:intergenic 35.0%
AATAGTGTGGAAAGAGGATA+TGG + tig0018446:147022-147041 None:intergenic 35.0%
ATAGTGAATAGTGTGGAAAG+AGG + tig0018446:147028-147047 None:intergenic 35.0%
! TGAAAAGGGTGTGAGAAAAA+TGG + tig0018446:147095-147114 None:intergenic 35.0%
!! TACCTATTTTCGAGGAAAAG+AGG - tig0018446:147120-147139 Msa1366290:three_prime_UTR 35.0%
! TTCCTCTTTTCCTCGAAAAT+AGG + tig0018446:147125-147144 None:intergenic 35.0%
! TTTTCTCTCTGTTCTGTTTG+TGG - tig0018446:147257-147276 Msa1366290:three_prime_UTR 35.0%
TTTCTCTCTGTTCTGTTTGT+GGG - tig0018446:147258-147277 Msa1366290:three_prime_UTR 35.0%
!! TTTTGGATCTAAGATTGTGC+TGG - tig0018446:147353-147372 Msa1366290:three_prime_UTR 35.0%
AATTGATGTGTGTAGTAGAG+TGG - tig0018446:147417-147436 Msa1366290:exon 35.0%
!! GTGATGATGGATCATGTAAT+TGG - tig0018446:147476-147495 Msa1366290:CDS 35.0%
!! ATGATGGATCATGTAATTGG+TGG - tig0018446:147479-147498 Msa1366290:CDS 35.0%
ATTGGTGGAAAATTCAAGCT+CGG - tig0018446:147494-147513 Msa1366290:CDS 35.0%
!! TCTATGCTTTTGTTTGGTTC+AGG - tig0018446:147640-147659 Msa1366290:CDS 35.0%
TCAGGTGTTAATGTACAAAC+TGG - tig0018446:147658-147677 Msa1366290:CDS 35.0%
TGTTAATGTACAAACTGGAG+AGG - tig0018446:147663-147682 Msa1366290:CDS 35.0%
AGAGGAAGTTGCTCTTAAAT+TGG - tig0018446:147681-147700 Msa1366290:CDS 35.0%
! TTTTTCTACTGGTGCATAGA+TGG - tig0018446:147747-147766 Msa1366290:intron 35.0%
CAATGCATTGCAATATGAAG+GGG + tig0018446:147901-147920 None:intergenic 35.0%
GCAATGCATTGCAATATGAA+GGG + tig0018446:147902-147921 None:intergenic 35.0%
ATGAAAAACCTAAGGGAGAT+TGG - tig0018446:148124-148143 Msa1366290:intron 35.0%
ACATAATGTACCTAGAGTCT+TGG - tig0018446:148286-148305 Msa1366290:intron 35.0%
GTTTACATCATTTGACATGC+TGG - tig0018446:148414-148433 Msa1366290:CDS 35.0%
CAATATCTATCCACATCTGT+TGG - tig0018446:148446-148465 Msa1366290:intron 35.0%
!! AGCTTAACTTTGAAACAGCT+AGG + tig0018446:148616-148635 None:intergenic 35.0%
ATTGTACATGCTTCTTCAAG+GGG - tig0018446:148721-148740 Msa1366290:intron 35.0%
!!! TCCTCTTTTCTTTTTGAAGC+GGG - tig0018446:148884-148903 Msa1366290:intron 35.0%
TTAAACAAGTCTTCCAGACT+TGG + tig0018446:148977-148996 None:intergenic 35.0%
! AGTTGTCAGGCTTTATATCA+CGG + tig0018446:149181-149200 None:intergenic 35.0%
CATAAATGACCAACCAGATA+AGG + tig0018446:149271-149290 None:intergenic 35.0%
ACTACACACTAGAGATCATT+AGG + tig0018446:149424-149443 None:intergenic 35.0%
AATAAATAGAGGCTACACAC+AGG + tig0018446:149546-149565 None:intergenic 35.0%
TGTGTGTAGCCTCTATTTAT+TGG - tig0018446:149545-149564 Msa1366290:intron 35.0%
GTGTGTAGCCTCTATTTATT+GGG - tig0018446:149546-149565 Msa1366290:intron 35.0%
TTCCATTCCCTCGATATATA+TGG - tig0018446:149694-149713 Msa1366290:intron 35.0%
TTCCATATATATCGAGGGAA+TGG + tig0018446:149699-149718 None:intergenic 35.0%
!! ACAACATGGCTTTATCAGAT+CGG + tig0018446:149758-149777 None:intergenic 35.0%
CCAAGACAGAGAATGTTATT+TGG + tig0018446:149839-149858 None:intergenic 35.0%
CCAAATAACATTCTCTGTCT+TGG - tig0018446:149836-149855 Msa1366290:intron 35.0%
AGTTGAAAGCTATGTGTTTC+TGG + tig0018446:149976-149995 None:intergenic 35.0%
AATATCAAGGCTGACAAATG+GGG + tig0018446:150206-150225 None:intergenic 35.0%
TACTAGGAGTCTGTTTATTG+AGG - tig0018446:150369-150388 Msa1366290:intron 35.0%
TAGATGTAACTACAGAAGGT+GGG + tig0018446:150506-150525 None:intergenic 35.0%
TTAGATGTAACTACAGAAGG+TGG + tig0018446:150507-150526 None:intergenic 35.0%
! ATAGTGTGTAGTTGGTTCTT+AGG + tig0018446:150595-150614 None:intergenic 35.0%
AGACCATAATAAGCCATTCT+TGG - tig0018446:150633-150652 Msa1366290:intron 35.0%
TCAGACTCAAACAATGTCAT+AGG - tig0018446:150690-150709 Msa1366290:intron 35.0%
AAACAAACATGGTACCTGTA+TGG + tig0018446:150927-150946 None:intergenic 35.0%
CATGCTACAGTAAACAAACA+TGG + tig0018446:150938-150957 None:intergenic 35.0%
! AAATTTGTTCCTTGAGTACG+GGG - tig0018446:150962-150981 Msa1366290:intron 35.0%
GGTGAAAAGGAAACATGATA+TGG + tig0018446:150990-151009 None:intergenic 35.0%
ACAGAAGCAAACAACATACT+GGG + tig0018446:151049-151068 None:intergenic 35.0%
TACAGAAGCAAACAACATAC+TGG + tig0018446:151050-151069 None:intergenic 35.0%
CATAATGATTGTTGTGTTGC+TGG - tig0018446:151190-151209 Msa1366290:intron 35.0%
! ATTGTTGTGTTGCTGGATTT+GGG - tig0018446:151197-151216 Msa1366290:intron 35.0%
CTTCAGGTAATGACACATAT+GGG + tig0018446:151369-151388 None:intergenic 35.0%
AATAAACAAGTGATGGCTTC+AGG + tig0018446:151385-151404 None:intergenic 35.0%
ATGGTCATTCACAGAAGAAA+AGG + tig0018446:151454-151473 None:intergenic 35.0%
! TTTTCTTCTGTGAATGACCA+TGG - tig0018446:151453-151472 Msa1366290:CDS 35.0%
AGTATTAACACTTGCATACC+GGG + tig0018446:151518-151537 None:intergenic 35.0%
GAGTATTAACACTTGCATAC+CGG + tig0018446:151519-151538 None:intergenic 35.0%
GCAAGTGTTAATACTCATCT+AGG - tig0018446:151523-151542 Msa1366290:intron 35.0%
GTTAATACTCATCTAGGAGT+TGG - tig0018446:151529-151548 Msa1366290:intron 35.0%
!! GTACTCATGTACTTTTTGAG+AGG - tig0018446:151695-151714 Msa1366290:CDS 35.0%
!! TCATGTACTTTTTGAGAGGA+AGG - tig0018446:151699-151718 Msa1366290:CDS 35.0%
CTCTTGAGATACGAATAATC+AGG + tig0018446:152100-152119 None:intergenic 35.0%
TTTAACCTTCTCGGATGAAT+AGG + tig0018446:152135-152154 None:intergenic 35.0%
! ACAAATTGGATCTAGTTCCA+GGG - tig0018446:152269-152288 Msa1366290:intron 35.0%
ACACAACACTTCACAAAATG+AGG + tig0018446:152323-152342 None:intergenic 35.0%
!!! TTCTTTTTCAACAGCCAAGT+GGG - tig0018446:152397-152416 Msa1366290:intron 35.0%
ATTTCAGTCCTACAGTTGTA+TGG - tig0018446:152663-152682 Msa1366290:intron 35.0%
TCCTACAGTTGTATGGTAAA+AGG - tig0018446:152670-152689 Msa1366290:intron 35.0%
TTGTTTGTCAGTTTGTGTGT+TGG - tig0018446:152875-152894 Msa1366290:intron 35.0%
TGTTTGTCAGTTTGTGTGTT+GGG - tig0018446:152876-152895 Msa1366290:intron 35.0%
! GACTCCTCTTATATCTCTTT+TGG - tig0018446:153418-153437 Msa1366290:five_prime_UTR 35.0%
CTTCCATGAATATTTCAGCA+TGG - tig0018446:153445-153464 Msa1366290:five_prime_UTR 35.0%
CATCCATGCTGAAATATTCA+TGG + tig0018446:153451-153470 None:intergenic 35.0%
CATGAATATTTCAGCATGGA+TGG - tig0018446:153449-153468 Msa1366290:five_prime_UTR 35.0%
GGCTGCTTGTAATAATTACA+TGG - tig0018446:153520-153539 Msa1366290:five_prime_UTR 35.0%
GGTACAAAATATGCATCACA+AGG + tig0018446:153616-153635 None:intergenic 35.0%
TACACTAGAACATAGTACTC+AGG + tig0018446:153637-153656 None:intergenic 35.0%
TCTAGTGTACATTCATGGAA+TGG - tig0018446:153648-153667 Msa1366290:five_prime_UTR 35.0%
GTACATTCATGGAATGGAAT+TGG - tig0018446:153654-153673 Msa1366290:five_prime_UTR 35.0%
! GATTTGTTCAAGGAGAAGAT+TGG + tig0018446:153704-153723 None:intergenic 35.0%
!! CCACTTTTCTTTCCTTTTCC+CGG - tig0018446:146928-146947 Msa1366290:three_prime_UTR 40.0%
! GACAAGGTGTGAATTTTGCT+GGG + tig0018446:146968-146987 None:intergenic 40.0%
!!! TATGGATTGGTGTTGGGTTT+TGG + tig0018446:147004-147023 None:intergenic 40.0%
!! AGAGGATATGGATTGGTGTT+GGG + tig0018446:147010-147029 None:intergenic 40.0%
!! AAGAGGATATGGATTGGTGT+TGG + tig0018446:147011-147030 None:intergenic 40.0%
TGTGGAAAGAGGATATGGAT+TGG + tig0018446:147017-147036 None:intergenic 40.0%
TGAGTCGATGAAGTGGAATT+GGG + tig0018446:147063-147082 None:intergenic 40.0%
TTGAGTCGATGAAGTGGAAT+TGG + tig0018446:147064-147083 None:intergenic 40.0%
!! ATCGATTTTGCGTGCAATTC+AGG - tig0018446:147172-147191 Msa1366290:three_prime_UTR 40.0%
! TCGATTTTGCGTGCAATTCA+GGG - tig0018446:147173-147192 Msa1366290:three_prime_UTR 40.0%
!! GAGATTGGGTTTTGTGATGA+TGG - tig0018446:147463-147482 Msa1366290:CDS 40.0%
TTCAAGCTCGGAAGGAAAAT+TGG - tig0018446:147506-147525 Msa1366290:CDS 40.0%
!! AAAATTGGTGGTGGGTCATT+TGG - tig0018446:147521-147540 Msa1366290:CDS 40.0%
TCATTTGGAGAGCTCTACTT+GGG - tig0018446:147536-147555 Msa1366290:CDS 40.0%
TTGACTTCTATTGGGTGCTT+AGG - tig0018446:147716-147735 Msa1366290:intron 40.0%
GGCAATGCATTGCAATATGA+AGG + tig0018446:147903-147922 None:intergenic 40.0%
!! CATAGCTAAGTTGGTACTAG+GGG + tig0018446:147924-147943 None:intergenic 40.0%
!! GCATAGCTAAGTTGGTACTA+GGG + tig0018446:147925-147944 None:intergenic 40.0%
!! AGCATAGCTAAGTTGGTACT+AGG + tig0018446:147926-147945 None:intergenic 40.0%
TACCAACTTAGCTATGCTCA+CGG - tig0018446:147928-147947 Msa1366290:intron 40.0%
GTACAATATGCCAAGACTCT+AGG + tig0018446:148299-148318 None:intergenic 40.0%
GCATTCAGTCAGTCTTAGTT+TGG - tig0018446:148579-148598 Msa1366290:CDS 40.0%
GTAGTGAAGTTGAGGATGTT+TGG + tig0018446:148693-148712 None:intergenic 40.0%
! TTTGACTCGTAGTGAAGTTG+AGG + tig0018446:148701-148720 None:intergenic 40.0%
TTGTACATGCTTCTTCAAGG+GGG - tig0018446:148722-148741 Msa1366290:intron 40.0%
ACCCGCTTCAAAAAGAAAAG+AGG + tig0018446:148888-148907 None:intergenic 40.0%
CGGGTATTCCCCATTTAAAA+TGG - tig0018446:148903-148922 Msa1366290:intron 40.0%
TGCAGATCAGCTAGTAAGTA+TGG - tig0018446:149039-149058 Msa1366290:intron 40.0%
! TTTAGGACGCAAAGCAAATC+AGG - tig0018446:149211-149230 Msa1366290:intron 40.0%
AGTCAATGCTGGATATGTAG+TGG + tig0018446:149239-149258 None:intergenic 40.0%
! GACTTGAATTCAGCCTTATC+TGG - tig0018446:149255-149274 Msa1366290:intron 40.0%
! TGAATTCAGCCTTATCTGGT+TGG - tig0018446:149259-149278 Msa1366290:intron 40.0%
GTGTAGTATCCACTATCCAT+AGG - tig0018446:149437-149456 Msa1366290:intron 40.0%
AGGCTACACACAGGTTTATT+GGG + tig0018446:149537-149556 None:intergenic 40.0%
! GGAGAGAAGCTTTAACAACA+TGG + tig0018446:149772-149791 None:intergenic 40.0%
TTAAGATGCCATGGCTTGAA+TGG + tig0018446:149798-149817 None:intergenic 40.0%
! GTTGGTTCTTAGGAAATACC+AGG + tig0018446:150585-150604 None:intergenic 40.0%
TGACTAGGATAGTGTGTAGT+TGG + tig0018446:150603-150622 None:intergenic 40.0%
GGTCTCAGCTTAAATTGACT+AGG + tig0018446:150618-150637 None:intergenic 40.0%
CAATGTCATAGGAACTTGAC+AGG - tig0018446:150701-150720 Msa1366290:intron 40.0%
CAGCACAGAATTTCAGCTAT+TGG + tig0018446:150792-150811 None:intergenic 40.0%
!!! GATCTCGGAACTTTTTTGCA+AGG + tig0018446:150884-150903 None:intergenic 40.0%
CACACAAGCATATACCATAC+AGG - tig0018446:150910-150929 Msa1366290:intron 40.0%
CAACCCAAGGAATCCAAAAA+AGG + tig0018446:151150-151169 None:intergenic 40.0%
! GATTGTTGTGTTGCTGGATT+TGG - tig0018446:151196-151215 Msa1366290:intron 40.0%
! GAGGATTTTCTTGCATATGC+AGG + tig0018446:151347-151366 None:intergenic 40.0%
GCTTCAGGTAATGACACATA+TGG + tig0018446:151370-151389 None:intergenic 40.0%
GAAAAGGAGACGAATGTGTA+GGG + tig0018446:151438-151457 None:intergenic 40.0%
AGAAAAGGAGACGAATGTGT+AGG + tig0018446:151439-151458 None:intergenic 40.0%
! TGACCATGGTACTTTTGTTC+AGG - tig0018446:151467-151486 Msa1366290:CDS 40.0%
! GACCATGGTACTTTTGTTCA+GGG - tig0018446:151468-151487 Msa1366290:CDS 40.0%
!! TTCCCTGAACAAAAGTACCA+TGG + tig0018446:151473-151492 None:intergenic 40.0%
AGGGAAAACAAAAACCTCAC+TGG - tig0018446:151487-151506 Msa1366290:CDS 40.0%
ACAAAGCAGAAGAGATGATC+TGG - tig0018446:151658-151677 Msa1366290:CDS 40.0%
! AGAGATGATCTGGAATCACT+TGG - tig0018446:151668-151687 Msa1366290:CDS 40.0%
GAAGATGCTTACTCCTATAG+AGG - tig0018446:151862-151881 Msa1366290:intron 40.0%
! GCGGGTTATAATACCTCTAT+AGG + tig0018446:151878-151897 None:intergenic 40.0%
TATCTTCAAACCGCAACGAT+CGG + tig0018446:152075-152094 None:intergenic 40.0%
CTGGAACTAGATCCAATTTG+TGG + tig0018446:152270-152289 None:intergenic 40.0%
! CACAAATTGGATCTAGTTCC+AGG - tig0018446:152268-152287 Msa1366290:intron 40.0%
! TGCTATTAAAGTACTCACCC+GGG + tig0018446:152295-152314 None:intergenic 40.0%
! GTGCTATTAAAGTACTCACC+CGG + tig0018446:152296-152315 None:intergenic 40.0%
!!! GTTCTTTTTCAACAGCCAAG+TGG - tig0018446:152396-152415 Msa1366290:intron 40.0%
!! TTTATGACTGGTTTCCCACT+TGG + tig0018446:152414-152433 None:intergenic 40.0%
GATTGTCCTGGATTTATGAC+TGG + tig0018446:152426-152445 None:intergenic 40.0%
GTCATAAATCCAGGACAATC+AGG - tig0018446:152426-152445 Msa1366290:intron 40.0%
AATCAGGAGAGAGAGTAGAA+CGG - tig0018446:152442-152461 Msa1366290:intron 40.0%
TGTTGAAGGAAGAAACCTGA+AGG + tig0018446:152468-152487 None:intergenic 40.0%
!! ATTCCAGATCTTGCTGTTGA+AGG + tig0018446:152482-152501 None:intergenic 40.0%
! GCCTTTTACCATACAACTGT+AGG + tig0018446:152674-152693 None:intergenic 40.0%
! AGTTGTATGGTAAAAGGCGT+TGG - tig0018446:152676-152695 Msa1366290:intron 40.0%
AGAGATTCGGGATAGATTCT+CGG - tig0018446:152743-152762 Msa1366290:intron 40.0%
TTTGCAAGAAGGAATGGATC+TGG - tig0018446:152780-152799 Msa1366290:intron 40.0%
! CTAACCACGTCTTTAGAAGA+TGG + tig0018446:152852-152871 None:intergenic 40.0%
! GCTTGATAAGACAGGTCTTT+TGG + tig0018446:153021-153040 None:intergenic 40.0%
AGACTTCTTGAGTCAAGCAA+GGG - tig0018446:153270-153289 Msa1366290:five_prime_UTR 40.0%
AGAGCATGAGCAATCAACAA+GGG + tig0018446:153337-153356 None:intergenic 40.0%
CATGTTGTCTCTTCGTGAAT+GGG + tig0018446:153476-153495 None:intergenic 40.0%
ACATGTTGTCTCTTCGTGAA+TGG + tig0018446:153477-153496 None:intergenic 40.0%
GTTGTGATGTGAAGTCAGGT+GGG + tig0018446:146882-146901 None:intergenic 45.0%
AGTTGTGATGTGAAGTCAGG+TGG + tig0018446:146883-146902 None:intergenic 45.0%
CCGGGAAAAGGAAAGAAAAG+TGG + tig0018446:146931-146950 None:intergenic 45.0%
AATTTCGGGATTCCGGGAAA+AGG + tig0018446:146943-146962 None:intergenic 45.0%
TGGGAAAATTTCGGGATTCC+GGG + tig0018446:146949-146968 None:intergenic 45.0%
CTGGGAAAATTTCGGGATTC+CGG + tig0018446:146950-146969 None:intergenic 45.0%
! GGACAAGGTGTGAATTTTGC+TGG + tig0018446:146969-146988 None:intergenic 45.0%
! TGGATCTGTCTTTGAGGACA+AGG + tig0018446:146984-147003 None:intergenic 45.0%
!!! GGGTTTTGGATCTGTCTTTG+AGG + tig0018446:146990-147009 None:intergenic 45.0%
GAGTCGATGAAGTGGAATTG+GGG + tig0018446:147062-147081 None:intergenic 45.0%
GTGGAAAATTCAAGCTCGGA+AGG - tig0018446:147498-147517 Msa1366290:CDS 45.0%
AAGCTCGGAAGGAAAATTGG+TGG - tig0018446:147509-147528 Msa1366290:CDS 45.0%
! TCGGAAGGAAAATTGGTGGT+GGG - tig0018446:147513-147532 Msa1366290:CDS 45.0%
GTCATTTGGAGAGCTCTACT+TGG - tig0018446:147535-147554 Msa1366290:CDS 45.0%
ACCAACTTAGCTATGCTCAC+GGG - tig0018446:147929-147948 Msa1366290:intron 45.0%
ACCTAAGGGAGATTGGTACT+TGG - tig0018446:148131-148150 Msa1366290:intron 45.0%
CACAGGTTCCTGACAAACAA+AGG + tig0018446:148666-148685 None:intergenic 45.0%
! TGAGGATGTTTGGTCTTCAC+AGG + tig0018446:148683-148702 None:intergenic 45.0%
TATCACGGTGAAGGAAACCA+CGG + tig0018446:149166-149185 None:intergenic 45.0%
! CAGGCTTTATATCACGGTGA+AGG + tig0018446:149175-149194 None:intergenic 45.0%
GGCTGAATTCAAGTCAATGC+TGG + tig0018446:149250-149269 None:intergenic 45.0%
GAGGCTACACACAGGTTTAT+TGG + tig0018446:149538-149557 None:intergenic 45.0%
CGGTGTAAAGCTTTCTTGCA+GGG + tig0018446:149738-149757 None:intergenic 45.0%
TCGGTGTAAAGCTTTCTTGC+AGG + tig0018446:149739-149758 None:intergenic 45.0%
!! TGTTTTGAATGGAAGGGGAC+TGG - tig0018446:149886-149905 Msa1366290:intron 45.0%
GCTTGTGTGTGTGAAGATCT+CGG + tig0018446:150899-150918 None:intergenic 45.0%
AGCAAACAACATACTGGGCA+GGG + tig0018446:151044-151063 None:intergenic 45.0%
AAGCAAACAACATACTGGGC+AGG + tig0018446:151045-151064 None:intergenic 45.0%
! GTTGCTGGATTTGGGATAAC+TGG - tig0018446:151205-151224 Msa1366290:intron 45.0%
! ATTTGGGATAACTGGCAGAC+AGG - tig0018446:151213-151232 Msa1366290:intron 45.0%
! GCAGGTGAAGGTTCAAGTTT+GGG + tig0018446:151322-151341 None:intergenic 45.0%
! AGCAGGTGAAGGTTCAAGTT+TGG + tig0018446:151323-151342 None:intergenic 45.0%
CAGGTAATGACACATATGGG+AGG + tig0018446:151366-151385 None:intergenic 45.0%
CAGCTTTCAAACCTTGCCAA+GGG + tig0018446:151805-151824 None:intergenic 45.0%
ACATAAAGGCTGCTTGCAAG+CGG + tig0018446:151897-151916 None:intergenic 45.0%
ATTGCATGAGTTTCTGCGTC+AGG - tig0018446:152000-152019 Msa1366290:intron 45.0%
GGGAAACCAGTCATAAATCC+AGG - tig0018446:152417-152436 Msa1366290:intron 45.0%
CTTCCTTCAACAGCAAGATC+TGG - tig0018446:152476-152495 Msa1366290:intron 45.0%
! GCGTTGGTCAAGTTCAACTA+AGG - tig0018446:152692-152711 Msa1366290:intron 45.0%
! TTTCAGGTGGACCAGAGATT+CGG - tig0018446:152730-152749 Msa1366290:intron 45.0%
GAGAATCTATCCCGAATCTC+TGG + tig0018446:152744-152763 None:intergenic 45.0%
GAGATTCGGGATAGATTCTC+GGG - tig0018446:152744-152763 Msa1366290:intron 45.0%
CAGTTCAGGCATTTGCAAGA+AGG - tig0018446:152769-152788 Msa1366290:intron 45.0%
CAGGCATTTGCAAGAAGGAA+TGG - tig0018446:152774-152793 Msa1366290:intron 45.0%
AATGATCACCATGCACACCA+TGG + tig0018446:152806-152825 None:intergenic 45.0%
CTCATCTGAAGATCTATGCC+TGG + tig0018446:152829-152848 None:intergenic 45.0%
! TGAGCCATCTTCTAAAGACG+TGG - tig0018446:152845-152864 Msa1366290:intron 45.0%
! TGTAGCAAGCTGATTCTGAG+AGG - tig0018446:152964-152983 Msa1366290:intron 45.0%
GTTCACCAGAAGAGTTTGGA+CGG + tig0018446:153046-153065 None:intergenic 45.0%
CTTGGTTCACCAGAAGAGTT+TGG + tig0018446:153050-153069 None:intergenic 45.0%
TGCTACTGCTCAAGAGCAAT+CGG + tig0018446:153088-153107 None:intergenic 45.0%
GCAGACTATCTACTACTCAG+AGG - tig0018446:153105-153124 Msa1366290:intron 45.0%
! GATGATTTGGACTCAAGACC+TGG + tig0018446:153137-153156 None:intergenic 45.0%
!! AGCTTTGAACTCCTGTCACT+TGG - tig0018446:153212-153231 Msa1366290:five_prime_UTR 45.0%
! TTTTTCCAGTGCCAAGTGAC+AGG + tig0018446:153226-153245 None:intergenic 45.0%
! TGTCACTTGGCACTGGAAAA+AGG - tig0018446:153225-153244 Msa1366290:five_prime_UTR 45.0%
CAGACTTCTTGAGTCAAGCA+AGG - tig0018446:153269-153288 Msa1366290:five_prime_UTR 45.0%
CAGAGCATGAGCAATCAACA+AGG + tig0018446:153338-153357 None:intergenic 45.0%
TGAATGGACCCAACATTGGA+TGG + tig0018446:153369-153388 None:intergenic 45.0%
TCCAATGTTGGGTCCATTCA+AGG - tig0018446:153369-153388 Msa1366290:five_prime_UTR 45.0%
TCCTTGAATGGACCCAACAT+TGG + tig0018446:153373-153392 None:intergenic 45.0%
TGGAATGGAATTGGCGAGTA+AGG - tig0018446:153663-153682 Msa1366290:five_prime_UTR 45.0%
TGGAATTGGCGAGTAAGGAT+TGG - tig0018446:153668-153687 Msa1366290:five_prime_UTR 45.0%
GGAATTGGCGAGTAAGGATT+GGG - tig0018446:153669-153688 Msa1366290:five_prime_UTR 45.0%
GAATTGGCGAGTAAGGATTG+GGG - tig0018446:153670-153689 Msa1366290:five_prime_UTR 45.0%
!!! TATATATATATATTTTTTTG+TGG - tig0018446:147856-147875 Msa1366290:CDS 5.0%
CAGGTGGGATAGATGAGATG+TGG + tig0018446:146867-146886 None:intergenic 50.0%
CTCGGAAGGAAAATTGGTGG+TGG - tig0018446:147512-147531 Msa1366290:CDS 50.0%
GTGGTCAAGTAGTAGCCTAG+TGG - tig0018446:147875-147894 Msa1366290:CDS 50.0%
TGCAATATGAAGGGGCCACT+AGG + tig0018446:147893-147912 None:intergenic 50.0%
CCAACTTAGCTATGCTCACG+GGG - tig0018446:147930-147949 Msa1366290:intron 50.0%
GCCAAGTACCAATCTCCCTT+AGG + tig0018446:148135-148154 None:intergenic 50.0%
! CTTGGCTGATTCCTTTGCGA+CGG - tig0018446:148149-148168 Msa1366290:intron 50.0%
ATCAGAAGTCACCGTCGCAA+AGG + tig0018446:148163-148182 None:intergenic 50.0%
TGAGGGTGACTACAATGCCA+TGG - tig0018446:148934-148953 Msa1366290:intron 50.0%
TCCAAGGAGGTCAATTGCCA+TGG + tig0018446:148954-148973 None:intergenic 50.0%
! AGTCTTCCAGACTTGGTCCA+AGG + tig0018446:148970-148989 None:intergenic 50.0%
ATCACGGTGAAGGAAACCAC+GGG + tig0018446:149165-149184 None:intergenic 50.0%
ATGCCATGGCTTGAATGGAG+GGG + tig0018446:149793-149812 None:intergenic 50.0%
GATGCCATGGCTTGAATGGA+GGG + tig0018446:149794-149813 None:intergenic 50.0%
AGATGCCATGGCTTGAATGG+AGG + tig0018446:149795-149814 None:intergenic 50.0%
GATATGGAACCCCGTACTCA+AGG + tig0018446:150974-150993 None:intergenic 50.0%
GACAAGGTGAAGACAACCCA+AGG + tig0018446:151163-151182 None:intergenic 50.0%
TTCTTGCATATGCAGGCAGC+AGG + tig0018446:151340-151359 None:intergenic 50.0%
AAAACCTCACTGGAACTGCC+CGG - tig0018446:151497-151516 Msa1366290:CDS 50.0%
AACTGTTTCCCAGTCTCCCT+TGG - tig0018446:151786-151805 Msa1366290:intron 50.0%
AAACCTTGCCAAGGGAGACT+GGG + tig0018446:151797-151816 None:intergenic 50.0%
CCAGCTTTCAAACCTTGCCA+AGG + tig0018446:151806-151825 None:intergenic 50.0%
CCTTGGCAAGGTTTGAAAGC+TGG - tig0018446:151803-151822 Msa1366290:intron 50.0%
CATAAAGGCTGCTTGCAAGC+GGG + tig0018446:151896-151915 None:intergenic 50.0%
!! TCTGCGTCAGGTTTTGTGCA+AGG - tig0018446:152012-152031 Msa1366290:intron 50.0%
TTTGTGCAAGGCACATCCGT+TGG - tig0018446:152024-152043 Msa1366290:intron 50.0%
TCCATTACTGCCGATCGTTG+CGG - tig0018446:152062-152081 Msa1366290:intron 50.0%
CGTGACCTATTCATCCGAGA+AGG - tig0018446:152127-152146 Msa1366290:intron 50.0%
ACTCTCTCTCCTGATTGTCC+TGG + tig0018446:152438-152457 None:intergenic 50.0%
TTCAGGTGGACCAGAGATTC+GGG - tig0018446:152731-152750 Msa1366290:intron 50.0%
TAGATTCTCGGGTGCAGTTC+AGG - tig0018446:152755-152774 Msa1366290:intron 50.0%
AGAAGGAATGGATCTGGCCA+TGG - tig0018446:152786-152805 Msa1366290:intron 50.0%
GTGTGCATGGTGATCATTCC+AGG - tig0018446:152808-152827 Msa1366290:intron 50.0%
TCAAGAGCAATCGGCTAGAG+CGG + tig0018446:153079-153098 None:intergenic 50.0%
ACTACTCAGAGGACTCAACC+AGG - tig0018446:153116-153135 Msa1366290:CDS 50.0%
GTGGTCGTGATGATACACTC+AGG - tig0018446:153189-153208 Msa1366290:exon 50.0%
CTTGAGTCAAGCAAGGGTCA+TGG - tig0018446:153276-153295 Msa1366290:five_prime_UTR 50.0%
CCCCGTGAGCATAGCTAAGT+TGG + tig0018446:147933-147952 None:intergenic 55.0%
TGCTCACGGGGACGTCAATA+AGG - tig0018446:147942-147961 Msa1366290:intron 55.0%
GGATGCTGGTCCAACAGATG+TGG + tig0018446:148459-148478 None:intergenic 55.0%
GCCATGGCAATTGACCTCCT+TGG - tig0018446:148950-148969 Msa1366290:intron 55.0%
TGACCTCCTTGGACCAAGTC+TGG - tig0018446:148961-148980 Msa1366290:CDS 55.0%
! CTTCCAGACTTGGTCCAAGG+AGG + tig0018446:148967-148986 None:intergenic 55.0%
GTTGAGTACATGCACTCCCG+TGG - tig0018446:149146-149165 Msa1366290:CDS 55.0%
TCTCCCCTCCATTCAAGCCA+TGG - tig0018446:149787-149806 Msa1366290:CDS 55.0%
CATATGCAGGCAGCAGGTGA+AGG + tig0018446:151334-151353 None:intergenic 55.0%
TTTCCCAGTCTCCCTTGGCA+AGG - tig0018446:151791-151810 Msa1366290:intron 55.0%
CAAACCTTGCCAAGGGAGAC+TGG + tig0018446:151798-151817 None:intergenic 55.0%
ACCGCAACGATCGGCAGTAA+TGG + tig0018446:152066-152085 None:intergenic 55.0%
! TTGGATCTAGTTCCAGGGCC+CGG - tig0018446:152274-152293 Msa1366290:intron 55.0%
GAGAGAGTAGAACGGCCTTC+AGG - tig0018446:152450-152469 Msa1366290:intron 55.0%
GGACGGCTGCTTGATAAGAC+AGG + tig0018446:153029-153048 None:intergenic 55.0%
AGCAGCCGTCCAAACTCTTC+TGG - tig0018446:153038-153057 Msa1366290:intron 55.0%
!! AATCGTGCTTCTGGGGCAAG+AGG - tig0018446:153167-153186 Msa1366290:CDS 55.0%
! GAACTCCTGTCACTTGGCAC+TGG - tig0018446:153218-153237 Msa1366290:five_prime_UTR 55.0%
CATACCGGGCAGTTCCAGTG+AGG + tig0018446:151504-151523 None:intergenic 60.0%
! TGGATCTAGTTCCAGGGCCC+GGG - tig0018446:152275-152294 Msa1366290:intron 60.0%
! TAAAGTACTCACCCGGGCCC+TGG + tig0018446:152289-152308 None:intergenic 60.0%
GGATCTGGCCATGGTGTGCA+TGG - tig0018446:152795-152814 Msa1366290:intron 60.0%
CCGTGACGAGAAGAGCTACG+CGG + tig0018446:152990-153009 None:intergenic 60.0%
CCGCGTAGCTCTTCTCGTCA+CGG - tig0018446:152987-153006 Msa1366290:CDS 60.0%
CGGCTAGAGCGGCTTTCACT+TGG + tig0018446:153068-153087 None:intergenic 60.0%
!! CGTGCTTCTGGGGCAAGAGG+TGG - tig0018446:153170-153189 Msa1366290:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0018446 gene 146847 153825 146847 ID=Msa1366290;Name=Msa1366290
tig0018446 mRNA 146847 153825 146847 ID=Msa1366290-mRNA-1;Parent=Msa1366290;Name=Msa1366290-mRNA-1;_AED=0.15;_eAED=0.15;_QI=632|1|1|1|1|1|14|572|464
tig0018446 exon 146847 147703 146847 ID=Msa1366290-mRNA-1:exon:15094;Parent=Msa1366290-mRNA-1
tig0018446 exon 147806 147936 147806 ID=Msa1366290-mRNA-1:exon:15093;Parent=Msa1366290-mRNA-1
tig0018446 exon 148201 148261 148201 ID=Msa1366290-mRNA-1:exon:15092;Parent=Msa1366290-mRNA-1
tig0018446 exon 148376 148449 148376 ID=Msa1366290-mRNA-1:exon:15091;Parent=Msa1366290-mRNA-1
tig0018446 exon 148524 148650 148524 ID=Msa1366290-mRNA-1:exon:15090;Parent=Msa1366290-mRNA-1
tig0018446 exon 148789 148873 148789 ID=Msa1366290-mRNA-1:exon:15089;Parent=Msa1366290-mRNA-1
tig0018446 exon 148952 149015 148952 ID=Msa1366290-mRNA-1:exon:15088;Parent=Msa1366290-mRNA-1
tig0018446 exon 149122 149183 149122 ID=Msa1366290-mRNA-1:exon:15087;Parent=Msa1366290-mRNA-1
tig0018446 exon 149741 149811 149741 ID=Msa1366290-mRNA-1:exon:15086;Parent=Msa1366290-mRNA-1
tig0018446 exon 151440 151535 151440 ID=Msa1366290-mRNA-1:exon:15085;Parent=Msa1366290-mRNA-1
tig0018446 exon 151621 151769 151621 ID=Msa1366290-mRNA-1:exon:15084;Parent=Msa1366290-mRNA-1
tig0018446 exon 151926 151995 151926 ID=Msa1366290-mRNA-1:exon:15083;Parent=Msa1366290-mRNA-1
tig0018446 exon 152970 153010 152970 ID=Msa1366290-mRNA-1:exon:15082;Parent=Msa1366290-mRNA-1
tig0018446 exon 153115 153825 153115 ID=Msa1366290-mRNA-1:exon:15081;Parent=Msa1366290-mRNA-1
tig0018446 five_prime_UTR 153194 153825 153194 ID=Msa1366290-mRNA-1:five_prime_utr;Parent=Msa1366290-mRNA-1
tig0018446 CDS 153115 153193 153115 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 CDS 152970 153010 152970 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 CDS 151926 151995 151926 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 CDS 151621 151769 151621 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 CDS 151440 151535 151440 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 CDS 149741 149811 149741 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 CDS 149122 149183 149122 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 CDS 148952 149015 148952 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 CDS 148789 148873 148789 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 CDS 148524 148650 148524 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 CDS 148376 148449 148376 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 CDS 148201 148261 148201 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 CDS 147806 147936 147806 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 CDS 147419 147703 147419 ID=Msa1366290-mRNA-1:cds;Parent=Msa1366290-mRNA-1
tig0018446 three_prime_UTR 146847 147418 146847 ID=Msa1366290-mRNA-1:three_prime_utr;Parent=Msa1366290-mRNA-1
Gene Sequence

>Msa1366290

ATGATGGATCATGTAATTGGTGGAAAATTCAAGCTCGGAAGGAAAATTGGTGGTGGGTCATTTGGAGAGCTCTACTTGGGTGTTAATGTACAAACTGGAGAGGAAGTTGCTCTTAAATTGGAACCTGTGAAGACCAAACATCCTCAACTTCACTACGAGTCAAAATTGTACATGCTTCTTCAAGGGGGAACGGGTATTCCCCATTTAAAATGGTTTGGAGTTGAGGGTGACTACAATGCCATGGCAATTGACCTCCTTGGACCAAGTCTGGAAGACTTGTTTAACTATTGCAATAGGAAATTCTCTCTAAAAACAGTTCTGATGCTTGCAGATCAGCTACTAAACAGAGTTGAGTACATGCACTCCCGTGGTTTCCTTCACCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTAGGACGCAAAGCAAATCAGGTATACATAATTGATTACGGCCTTGCAAAAAAGTTCCGAGATCTTCACACACACAAGCATATACCATACAGGGAAAACAAAAACCTCACTGGAACTGCCCGGTATGCAAGTGTTAATACTCATCTAGGAGTTGAACAAAGCAGAAGAGATGATCTGGAATCACTTGGTTTTGTACTCATGTACTTTTTGAGAGGAAGTCTCCCTTGGCAAGGTTTGAAAGCTGGCAATAAAAAACAAAAATACGACAGAATAAGTGAAAAGAAGATGCTTACTCCTATAGAGGTTTTGTGCAAGGCACATCCGTTGGAATTTACATCATACTTCCATTACTGCCGATCGTTGCGGTTTGAAGATAAGCCTGATTATTCGTATCTCAAGAGACTCTTTCGTGACCTATTCATCCGAGAAGGCTATCAGTTTGATTATGTGTTTGATTGGACTATATTGAAGTATCCACAAATTGGATCTAGTTCCAGGGCCCGGCCAAGTGGGAAACCAGTCATAAATCCAGGACAATCAGGAGAGAGAGTAGAACGGCCTTCAGGTGGACCAGAGATTCGGGATAGATTCTCGGGTGCAGTTCAGGCATTTGCAAGAAGGAATGGATCTGGCCATGGTGTGCATGGTGATCATTCCAGGCATAGATCTTCAGATGAGCCATCTTCTAAAGACGTGCAAGCTGATTCTGAGAGGCCGCGTAGCTCTTCTCGTCACGGCAGTTCTTCCAAAAGACCTGTCTTATCAAGCAGCCGTCCAAACTCTTCTGGTGAACCAAGTGAAAGCCGCTCTAGCCGATTGCTCTTGAGCAGTAGCAGACTATCTACTACTCAGAGGACTCAACCAGGTCTTGAGTCCAAATCATCATCATTTAATAATCGTGCTTCTGGGGCAAGAGGTGGTCGTGATGATACACTCAGGAGCTTTGAACTCCTGTCACTTGGCACTGGAAAAAGGAAATGA
Protein sequence

>Msa1366290

MMDHVIGGKFKLGRKIGGGSFGELYLGVNVQTGEEVALKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNAMAIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLLNRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKFRDLHTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGFVLMYFLRGSLPWQGLKAGNKKQKYDRISEKKMLTPIEVLCKAHPLEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRARPSGKPVINPGQSGERVERPSGGPEIRDRFSGAVQAFARRNGSGHGVHGDHSRHRSSDEPSSKDVQADSERPRSSSRHGSSSKRPVLSSSRPNSSGEPSESRSSRLLLSSSRLSTTQRTQPGLESKSSSFNNRASGARGGRDDTLRSFELLSLGTGKRK*