AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1433210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433210 MtrunA17_Chr1g0187571 98.922 464 5 0 1 464 1 464 0.0 945
Msa1433210 MtrunA17_Chr1g0166821 86.452 465 55 3 1 464 1 458 0.0 768
Msa1433210 MtrunA17_Chr7g0261501 76.840 462 101 5 2 458 1 461 0.0 703
Msa1433210 MtrunA17_Chr1g0183631 72.451 461 114 8 2 458 1 452 0.0 671
Msa1433210 MtrunA17_Chr2g0329981 60.421 475 171 7 2 462 1 472 0.0 545
Msa1433210 MtrunA17_Chr8g0342821 59.916 479 158 9 2 458 1 467 0.0 536
Msa1433210 MtrunA17_Chr4g0071031 77.143 315 68 2 2 316 1 311 0.0 531
Msa1433210 MtrunA17_Chr1g0167261 71.545 369 73 4 1 366 1 340 0.0 524
Msa1433210 MtrunA17_Chr8g0390211 59.954 432 150 7 2 423 1 419 1.31e-179 509
Msa1433210 MtrunA17_Chr6g0486611 60.373 429 148 8 2 420 1 417 2.72e-179 508
Msa1433210 MtrunA17_Chr2g0299661 59.712 417 149 7 2 417 1 399 1.41e-173 495
Msa1433210 MtrunA17_Chr1g0146151 66.242 314 106 0 2 315 1 314 1.09e-160 461
Msa1433210 MtrunA17_Chr3g0140071 54.005 437 178 5 2 422 1 430 8.31e-160 459
Msa1433210 MtrunA17_Chr7g0214531 39.100 289 157 6 6 278 31 316 1.66e-58 202
Msa1433210 MtrunA17_Chr3g0140431 39.068 279 157 6 6 274 32 307 3.25e-56 196
Msa1433210 MtrunA17_Chr1g0146301 37.993 279 160 6 6 274 118 393 2.92e-55 195
Msa1433210 MtrunA17_Chr1g0213321 37.676 284 163 6 6 278 113 393 1.35e-54 193
Msa1433210 MtrunA17_Chr7g0253211 37.943 282 159 5 10 278 324 602 2.45e-53 192
Msa1433210 MtrunA17_Chr8g0340491 36.879 282 156 6 10 274 128 404 8.76e-50 180
Msa1433210 MtrunA17_Chr5g0405421 25.455 220 147 6 9 220 98 308 4.85e-13 71.2
Msa1433210 MtrunA17_Chr7g0245031 32.857 140 80 4 108 247 250 375 2.19e-12 68.9
Msa1433210 MtrunA17_Chr4g0072831 30.065 153 75 5 8 154 8 134 8.75e-12 66.2
Msa1433210 MtrunA17_Chr7g0267751 27.189 217 134 9 10 216 135 337 2.07e-11 66.2
Msa1433210 MtrunA17_Chr4g0075541 26.241 282 178 10 12 282 89 351 2.50e-11 65.1
Msa1433210 MtrunA17_Chr7g0267771 27.064 218 133 7 10 216 88 290 2.52e-11 65.5
Msa1433210 MtrunA17_Chr1g0203881 24.809 262 167 8 9 251 40 290 3.01e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433210 AT3G23340.1 75.862 464 89 6 2 464 1 442 0.0 713
Msa1433210 AT4G14340.1 74.249 466 101 5 2 464 7 456 0.0 710
Msa1433210 AT4G28540.1 73.950 476 102 9 2 458 5 477 0.0 687
Msa1433210 AT5G43320.1 71.933 481 116 8 2 464 1 480 0.0 686
Msa1433210 AT3G23340.2 73.276 464 87 7 2 464 1 428 0.0 679
Msa1433210 AT1G04440.1 71.338 471 124 7 2 464 1 468 0.0 664
Msa1433210 AT1G03930.1 73.093 472 109 4 2 458 1 469 0.0 657
Msa1433210 AT5G44100.1 72.479 476 110 6 2 458 1 474 0.0 628
Msa1433210 AT5G44100.2 72.479 476 110 6 2 458 1 474 0.0 628
Msa1433210 AT4G14340.2 84.404 327 50 1 2 327 7 333 0.0 597
Msa1433210 AT5G43320.2 80.655 336 54 2 2 329 1 333 0.0 567
Msa1433210 AT5G43320.3 80.655 336 54 2 2 329 1 333 0.0 567
Msa1433210 AT1G72710.1 69.474 380 106 4 2 374 1 377 0.0 544
Msa1433210 AT4G26100.1 63.158 437 146 9 2 433 1 427 0.0 532
Msa1433210 AT5G57015.1 72.619 336 87 3 2 337 1 331 0.0 521
Msa1433210 AT2G19470.1 74.839 310 75 1 2 311 1 307 0.0 517
Msa1433210 AT4G28880.3 60.386 414 139 6 2 395 1 409 2.60e-176 500
Msa1433210 AT4G28880.2 60.386 414 139 6 2 395 1 409 2.60e-176 500
Msa1433210 AT4G28880.1 60.386 414 139 6 2 395 1 409 2.60e-176 500
Msa1433210 AT4G28880.4 60.386 414 139 6 2 395 1 409 2.60e-176 500
Msa1433210 AT4G28860.2 70.717 321 89 2 2 322 1 316 6.79e-175 495
Msa1433210 AT4G28860.1 70.717 321 89 2 2 322 1 316 3.41e-174 495
Msa1433210 AT4G08800.1 64.430 298 74 2 2 299 1 266 2.86e-143 411
Msa1433210 AT2G25760.2 40.000 280 153 4 10 274 107 386 4.02e-60 209
Msa1433210 AT2G25760.1 39.643 280 151 5 10 274 107 383 2.14e-57 201
Msa1433210 AT3G13670.1 36.678 289 164 6 6 278 131 416 2.17e-54 193
Msa1433210 AT5G18190.2 37.234 282 161 5 10 278 130 408 4.54e-54 192
Msa1433210 AT5G18190.1 37.234 282 161 5 10 278 130 408 4.54e-54 192
Msa1433210 AT3G03940.1 37.234 282 161 5 10 278 140 418 4.79e-54 192
Msa1433210 AT3G06030.1 25.926 216 141 5 9 214 67 273 1.20e-12 70.5
Msa1433210 AT2G38910.1 26.667 285 156 10 2 246 119 390 3.86e-12 68.9
Msa1433210 AT3G50530.1 26.872 227 143 7 6 220 144 359 4.05e-12 68.9
Msa1433210 AT1G09000.1 25.581 215 141 4 10 214 69 274 3.69e-11 65.9
Msa1433210 AT5G39440.1 27.354 223 147 6 10 228 19 230 3.77e-11 65.5
Msa1433210 AT2G17890.1 23.423 222 149 7 9 220 107 317 4.26e-11 65.5
Msa1433210 AT1G09000.2 25.581 215 141 4 10 214 69 274 8.40e-11 64.7
Msa1433210 AT1G30270.1 28.049 246 139 12 8 237 29 252 8.74e-11 64.3

Find 184 sgRNAs with CRISPR-Local

Find 469 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATGGATTGGTGTGGGTTT+TGG 0.194831 tig0027239:+51039 None:intergenic
TCATTTAATAATCGTGCTTC+TGG 0.214021 tig0027239:-44865 Msa1433210:CDS
GACTCCTCTTATATCTCTTT+TGG 0.225564 tig0027239:-44607 Msa1433210:three_prime_UTR
CTGGGAAAATTTCGGGATTC+CGG 0.230740 tig0027239:+51093 None:intergenic
AAAATTGCTATGTAAGTTTC+TGG 0.243029 tig0027239:-44437 Msa1433210:three_prime_UTR
TGTCACTTGGCACTGGAAAA+AGG 0.247125 tig0027239:-44798 Msa1433210:CDS
TTTGAAATTTAGCTTGAATT+AGG 0.260045 tig0027239:-50600 Msa1433210:five_prime_UTR
TTTAGAAATTTGTTAATATA+TGG 0.266874 tig0027239:-44526 Msa1433210:three_prime_UTR
CGGGTATTCCCCATTTAAAA+TGG 0.292102 tig0027239:-49121 Msa1433210:CDS
GCTTGATAAGACAGGTCTTT+TGG 0.292884 tig0027239:+45005 None:intergenic
AAAGAAAAGTGGAAAGAAAA+TGG 0.295534 tig0027239:+51123 None:intergenic
TTTCTCTCTGTTCTGTTTGT+GGG 0.298944 tig0027239:-50783 Msa1433210:five_prime_UTR
ATTATTAAATGATGATGATT+TGG 0.313853 tig0027239:+44876 None:intergenic
TTCAAGCTCGGAAGGAAAAT+TGG 0.317743 tig0027239:-50535 Msa1433210:CDS
TTGAGTCGATGAAGTGGAAT+TGG 0.320093 tig0027239:+50980 None:intergenic
GTGATGATGGATCATGTAAT+TGG 0.322381 tig0027239:-50565 Msa1433210:CDS
CTTGGTTCACCAGAAGAGTT+TGG 0.328063 tig0027239:+44976 None:intergenic
TGAGTCGATGAAGTGGAATT+GGG 0.330154 tig0027239:+50981 None:intergenic
CACAAATTGGATCTAGTTCC+AGG 0.331261 tig0027239:-45755 Msa1433210:CDS
TGGGAAAATTTCGGGATTCC+GGG 0.335282 tig0027239:+51094 None:intergenic
AAAATTGGTGGTGGGTCATT+TGG 0.338722 tig0027239:-50520 Msa1433210:CDS
AGCAGCCGTCCAAACTCTTC+TGG 0.341980 tig0027239:-44985 Msa1433210:CDS
TAAGATTGTGCTGGAAATAT+AGG 0.343670 tig0027239:-50679 Msa1433210:five_prime_UTR
AGAGGAAGTTGCTCTTAAAT+TGG 0.345528 tig0027239:-50360 Msa1433210:intron
TTTAACCTTCTCGGATGAAT+AGG 0.346286 tig0027239:+45891 None:intergenic
GATGTGGAAAGAACAGAAAA+TGG 0.354567 tig0027239:+51193 None:intergenic
TCATAAAGAAATTCCTTGAA+TGG 0.354599 tig0027239:+44643 None:intergenic
TAGATTCTCGGGTGCAGTTC+AGG 0.359219 tig0027239:-45268 Msa1433210:CDS
ATTCCCCATTTAAAATGGTT+TGG 0.360672 tig0027239:-49116 Msa1433210:CDS
GAATTCAAATTTAACCTTCT+CGG 0.361148 tig0027239:+45882 None:intergenic
ATATTGAAGTATCCACAAAT+TGG 0.362130 tig0027239:-45768 Msa1433210:CDS
AATAGTGTGGAAAGAGGATA+TGG 0.362313 tig0027239:+51022 None:intergenic
CATTTAATAATCGTGCTTCT+GGG 0.365719 tig0027239:-44864 Msa1433210:CDS
GAGAGAGTAGAACGGCCTTC+AGG 0.366937 tig0027239:-45573 Msa1433210:intron
ACTTGTTTAACTATTGCAAT+AGG 0.374193 tig0027239:-49037 Msa1433210:CDS
TTCAGGTGGACCAGAGATTC+GGG 0.376581 tig0027239:-45292 Msa1433210:intron
TGACCTCCTTGGACCAAGTC+TGG 0.378575 tig0027239:-49063 Msa1433210:CDS
TTTCAGGTGGACCAGAGATT+CGG 0.384714 tig0027239:-45293 Msa1433210:intron
TTTAGCTTGAATTAGGAGAT+TGG 0.391245 tig0027239:-50593 Msa1433210:five_prime_UTR
GCGGGTTATAATACCTCTAT+AGG 0.393119 tig0027239:+46148 None:intergenic
TATGTTCTAGTGTACATTCA+TGG 0.401338 tig0027239:-44382 Msa1433210:three_prime_UTR
GTCATAAATCCAGGACAATC+AGG 0.401717 tig0027239:-45597 Msa1433210:CDS
ACTCTCTCTCCTGATTGTCC+TGG 0.401749 tig0027239:+45588 None:intergenic
GTACATTCATGGAATGGAAT+TGG 0.404103 tig0027239:-44371 Msa1433210:three_prime_UTR
AGTTTGATTATGTGTTTGAT+TGG 0.406009 tig0027239:-45794 Msa1433210:CDS
TGGAATGGAATTGGCGAGTA+AGG 0.413433 tig0027239:-44362 Msa1433210:three_prime_UTR
ACAAAGCAGAAGAGATGATC+TGG 0.417037 tig0027239:-46365 Msa1433210:CDS
AAATTGTACATGCTTCTTCA+AGG 0.419496 tig0027239:-49305 Msa1433210:CDS
GGAATTGGCGAGTAAGGATT+GGG 0.419680 tig0027239:-44356 Msa1433210:three_prime_UTR
ATTTCTTTATGAAGAAGCTT+TGG 0.421445 tig0027239:-44632 Msa1433210:three_prime_UTR
TTTAGGACGCAAAGCAAATC+AGG 0.425650 tig0027239:-48813 Msa1433210:intron
TTTATGACTGGTTTCCCACT+TGG 0.426175 tig0027239:+45612 None:intergenic
AAAATAGGTAAAATATGAAA+AGG 0.427523 tig0027239:+50934 None:intergenic
TTTAAAATGGTTTGGAGTTG+AGG 0.433665 tig0027239:-49108 Msa1433210:CDS
GTCATTTGGAGAGCTCTACT+TGG 0.434739 tig0027239:-50506 Msa1433210:CDS
TTAGCTTGAATTAGGAGATT+GGG 0.435311 tig0027239:-50592 Msa1433210:five_prime_UTR
CATCCATGCTGAAATATTCA+TGG 0.435352 tig0027239:+44577 None:intergenic
ACAAATTGATGATTTGTTCA+AGG 0.437148 tig0027239:+44314 None:intergenic
GATTGTCCTGGATTTATGAC+TGG 0.439156 tig0027239:+45600 None:intergenic
TTAAAATGGTTTGGAGTTGA+GGG 0.440355 tig0027239:-49107 Msa1433210:CDS
GTAGTGAAGTTGAGGATGTT+TGG 0.441312 tig0027239:+49334 None:intergenic
CGGCTAGAGCGGCTTTCACT+TGG 0.441375 tig0027239:+44958 None:intergenic
GTGTGCATGGTGATCATTCC+AGG 0.443890 tig0027239:-45215 Msa1433210:CDS
AACTGTTTCCCAGTCTCCCT+TGG 0.448040 tig0027239:-46237 Msa1433210:intron
GCAAGTGTTAATACTCATCT+AGG 0.449215 tig0027239:-46500 Msa1433210:CDS
CAGGTATACATAATTGATTA+CGG 0.449576 tig0027239:-47166 Msa1433210:CDS
ACATGTTGTCTCTTCGTGAA+TGG 0.449603 tig0027239:+44551 None:intergenic
ACCGCAACGATCGGCAGTAA+TGG 0.450799 tig0027239:+45960 None:intergenic
TCAGGTGTTAATGTACAAAC+TGG 0.455615 tig0027239:-50383 Msa1433210:intron
TGGAATTGGCGAGTAAGGAT+TGG 0.457588 tig0027239:-44357 Msa1433210:three_prime_UTR
TCCAATGTTGGGTCCATTCA+AGG 0.462914 tig0027239:-44656 Msa1433210:three_prime_UTR
TAAAGTACTCACCCGGGCCC+TGG 0.463637 tig0027239:+45737 None:intergenic
TGCTACTGCTCAAGAGCAAT+CGG 0.463680 tig0027239:+44938 None:intergenic
CATGTTGTCTCTTCGTGAAT+GGG 0.465371 tig0027239:+44552 None:intergenic
TGAGGATGTTTGGTCTTCAC+AGG 0.466320 tig0027239:+49344 None:intergenic
CATGAATATTTCAGCATGGA+TGG 0.469973 tig0027239:-44576 Msa1433210:three_prime_UTR
AGAGATTCGGGATAGATTCT+CGG 0.471393 tig0027239:-45280 Msa1433210:CDS
AATTTCGGGATTCCGGGAAA+AGG 0.474919 tig0027239:+51100 None:intergenic
GAGAATCTATCCCGAATCTC+TGG 0.479581 tig0027239:+45282 None:intergenic
AACACCAAAAGAGATATAAG+AGG 0.479596 tig0027239:+44603 None:intergenic
TTAAACAAGTCTTCCAGACT+TGG 0.485095 tig0027239:+49050 None:intergenic
GAACTCCTGTCACTTGGCAC+TGG 0.485260 tig0027239:-44805 Msa1433210:CDS
TTGGATCTAGTTCCAGGGCC+CGG 0.486826 tig0027239:-45749 Msa1433210:CDS
CCTTGGCAAGGTTTGAAAGC+TGG 0.488040 tig0027239:-46220 Msa1433210:CDS
CAGGCATTTGCAAGAAGGAA+TGG 0.490425 tig0027239:-45249 Msa1433210:CDS
TGGATCTAGTTCCAGGGCCC+GGG 0.493698 tig0027239:-45748 Msa1433210:intron
AGCTTTGAACTCCTGTCACT+TGG 0.494711 tig0027239:-44811 Msa1433210:CDS
CTCTTGAGATACGAATAATC+AGG 0.495706 tig0027239:+45926 None:intergenic
CAGTTCAGGCATTTGCAAGA+AGG 0.496735 tig0027239:-45254 Msa1433210:CDS
TTTCCCAGTCTCCCTTGGCA+AGG 0.501011 tig0027239:-46232 Msa1433210:intron
GAAGATGCTTACTCCTATAG+AGG 0.503426 tig0027239:-46161 Msa1433210:intron
GAGTATTAACACTTGCATAC+CGG 0.504831 tig0027239:+46507 None:intergenic
GAGATTCGGGATAGATTCTC+GGG 0.507677 tig0027239:-45279 Msa1433210:CDS
AAAAGTTGTGATGTGAAGTC+AGG 0.509486 tig0027239:+51158 None:intergenic
CTGGAACTAGATCCAATTTG+TGG 0.509685 tig0027239:+45756 None:intergenic
AAATAGGTAAAATATGAAAA+GGG 0.510670 tig0027239:+50935 None:intergenic
CTCATCTGAAGATCTATGCC+TGG 0.513835 tig0027239:+45197 None:intergenic
TGGATCTGTCTTTGAGGACA+AGG 0.515041 tig0027239:+51059 None:intergenic
AATTGTACATGCTTCTTCAA+GGG 0.515160 tig0027239:-49304 Msa1433210:CDS
TTTGCAAGAAGGAATGGATC+TGG 0.516230 tig0027239:-45243 Msa1433210:CDS
AAACAAACATGGTACCTGTA+TGG 0.519200 tig0027239:+47100 None:intergenic
CTAACCACGTCTTTAGAAGA+TGG 0.525542 tig0027239:+45174 None:intergenic
TTAAATTTGAGTCGATGAAG+TGG 0.529967 tig0027239:+50974 None:intergenic
TTTGACTCGTAGTGAAGTTG+AGG 0.532224 tig0027239:+49326 None:intergenic
CCAGCTTTCAAACCTTGCCA+AGG 0.533106 tig0027239:+46220 None:intergenic
TCCTTGAATGGACCCAACAT+TGG 0.534362 tig0027239:+44655 None:intergenic
GTTAATACTCATCTAGGAGT+TGG 0.534550 tig0027239:-46494 Msa1433210:intron
AGTATTAACACTTGCATACC+GGG 0.534714 tig0027239:+46508 None:intergenic
GGGAAACCAGTCATAAATCC+AGG 0.534889 tig0027239:-45606 Msa1433210:CDS
TCCATTACTGCCGATCGTTG+CGG 0.536213 tig0027239:-45961 Msa1433210:CDS
TGAATGGACCCAACATTGGA+TGG 0.539367 tig0027239:+44659 None:intergenic
TCATTTGGAGAGCTCTACTT+GGG 0.539914 tig0027239:-50505 Msa1433210:intron
GGACGGCTGCTTGATAAGAC+AGG 0.541596 tig0027239:+44997 None:intergenic
CACACAAGCATATACCATAC+AGG 0.541677 tig0027239:-47114 Msa1433210:intron
CTCGGAAGGAAAATTGGTGG+TGG 0.543152 tig0027239:-50529 Msa1433210:CDS
CAGCTTTCAAACCTTGCCAA+GGG 0.543251 tig0027239:+46221 None:intergenic
TATCTTCAAACCGCAACGAT+CGG 0.543597 tig0027239:+45951 None:intergenic
CGTGACCTATTCATCCGAGA+AGG 0.545158 tig0027239:-45896 Msa1433210:intron
TTTGTGCAAGGCACATCCGT+TGG 0.545816 tig0027239:-45999 Msa1433210:CDS
GGCTGCTTGTAATAATTACA+TGG 0.548094 tig0027239:-44505 Msa1433210:three_prime_UTR
GATTTGTTCAAGGAGAAGAT+TGG 0.550673 tig0027239:+44324 None:intergenic
GCCATGGCAATTGACCTCCT+TGG 0.551055 tig0027239:-49074 Msa1433210:CDS
CTTGAGTCAAGCAAGGGTCA+TGG 0.555144 tig0027239:-44743 Msa1433210:three_prime_UTR
AGTTGTCAGGCTTTATATCA+CGG 0.558010 tig0027239:+48846 None:intergenic
ATTGTACATGCTTCTTCAAG+GGG 0.562314 tig0027239:-49303 Msa1433210:CDS
CCGGGAAAAGGAAAGAAAAG+TGG 0.562774 tig0027239:+51112 None:intergenic
AAAACCTCACTGGAACTGCC+CGG 0.564841 tig0027239:-46526 Msa1433210:CDS
TCTAGTGTACATTCATGGAA+TGG 0.565103 tig0027239:-44377 Msa1433210:three_prime_UTR
ATAGTGAATAGTGTGGAAAG+AGG 0.572143 tig0027239:+51016 None:intergenic
CAGGTGGGATAGATGAGATG+TGG 0.573028 tig0027239:+51177 None:intergenic
GGATCTGGCCATGGTGTGCA+TGG 0.573110 tig0027239:-45228 Msa1433210:CDS
CGTGCTTCTGGGGCAAGAGG+TGG 0.573464 tig0027239:-44853 Msa1433210:CDS
GTGGAAAATTCAAGCTCGGA+AGG 0.575556 tig0027239:-50543 Msa1433210:CDS
GAGTCGATGAAGTGGAATTG+GGG 0.577689 tig0027239:+50982 None:intergenic
AATTGATGTGTGTAGTAGAG+TGG 0.579591 tig0027239:-50624 Msa1433210:five_prime_UTR
AAGAGGATATGGATTGGTGT+GGG 0.582549 tig0027239:+51033 None:intergenic
ATTGGTGGAAAATTCAAGCT+CGG 0.586349 tig0027239:-50547 Msa1433210:CDS
AGAGATGATCTGGAATCACT+TGG 0.587254 tig0027239:-46355 Msa1433210:CDS
CTTCCATGAATATTTCAGCA+TGG 0.593378 tig0027239:-44580 Msa1433210:three_prime_UTR
AATCGTGCTTCTGGGGCAAG+AGG 0.593465 tig0027239:-44856 Msa1433210:CDS
GTTCACCAGAAGAGTTTGGA+CGG 0.595743 tig0027239:+44980 None:intergenic
ATTTAATAATCGTGCTTCTG+GGG 0.598016 tig0027239:-44863 Msa1433210:CDS
AGTTGTGATGTGAAGTCAGG+TGG 0.598192 tig0027239:+51161 None:intergenic
TCCAAGGAGGTCAATTGCCA+TGG 0.600545 tig0027239:+49073 None:intergenic
CAGGCTTTATATCACGGTGA+AGG 0.608260 tig0027239:+48852 None:intergenic
AATTAAGATAGTGAATAGTG+TGG 0.609487 tig0027239:+51009 None:intergenic
CAGACTTCTTGAGTCAAGCA+AGG 0.611739 tig0027239:-44750 Msa1433210:three_prime_UTR
GCTTGTGTGTGTGAAGATCT+CGG 0.612004 tig0027239:+47128 None:intergenic
AAGTATGATGTAAATTCCAA+CGG 0.613345 tig0027239:+45983 None:intergenic
AAAGAGGATATGGATTGGTG+TGG 0.616457 tig0027239:+51032 None:intergenic
GTTGTGATGTGAAGTCAGGT+GGG 0.617901 tig0027239:+51162 None:intergenic
AGTCTTCCAGACTTGGTCCA+AGG 0.617923 tig0027239:+49057 None:intergenic
TACACTAGAACATAGTACTC+AGG 0.619256 tig0027239:+44391 None:intergenic
ACAAATTGGATCTAGTTCCA+GGG 0.625877 tig0027239:-45754 Msa1433210:CDS
GTTGAGTACATGCACTCCCG+TGG 0.629864 tig0027239:-48878 Msa1433210:CDS
ATGATGGATCATGTAATTGG+TGG 0.630712 tig0027239:-50562 Msa1433210:CDS
AAGCTCGGAAGGAAAATTGG+TGG 0.634557 tig0027239:-50532 Msa1433210:CDS
TGTGGAAAGAGGATATGGAT+TGG 0.636850 tig0027239:+51027 None:intergenic
TCGGAAGGAAAATTGGTGGT+GGG 0.637716 tig0027239:-50528 Msa1433210:CDS
AGACTTCTTGAGTCAAGCAA+GGG 0.639265 tig0027239:-44749 Msa1433210:three_prime_UTR
AGAAGGAATGGATCTGGCCA+TGG 0.643782 tig0027239:-45237 Msa1433210:CDS
TGAGGGTGACTACAATGCCA+TGG 0.644969 tig0027239:-49090 Msa1433210:CDS
GGTACAAAATATGCATCACA+AGG 0.646634 tig0027239:+44412 None:intergenic
TGTTAATGTACAAACTGGAG+AGG 0.648733 tig0027239:-50378 Msa1433210:CDS
ACTACTCAGAGGACTCAACC+AGG 0.650293 tig0027239:-44907 Msa1433210:CDS
AATATACAGAGCAATCAACA+AGG 0.652324 tig0027239:+44684 None:intergenic
CCGCGTAGCTCTTCTCGTCA+CGG 0.653072 tig0027239:-45036 Msa1433210:CDS
TGTAGCAAGCTGATTCTGAG+AGG 0.654308 tig0027239:-45059 Msa1433210:intron
AATGATCACCATGCACACCA+TGG 0.661002 tig0027239:+45220 None:intergenic
GATGATTTGGACTCAAGACC+TGG 0.661178 tig0027239:+44889 None:intergenic
ATCACGGTGAAGGAAACCAC+GGG 0.662401 tig0027239:+48862 None:intergenic
TCAAGAGCAATCGGCTAGAG+CGG 0.663121 tig0027239:+44947 None:intergenic
AATCAGGAGAGAGAGTAGAA+CGG 0.663172 tig0027239:-45581 Msa1433210:CDS
CATACCGGGCAGTTCCAGTG+AGG 0.669824 tig0027239:+46522 None:intergenic
TATCACGGTGAAGGAAACCA+CGG 0.680680 tig0027239:+48861 None:intergenic
CTTCCAGACTTGGTCCAAGG+AGG 0.681469 tig0027239:+49060 None:intergenic
TTGTACATGCTTCTTCAAGG+GGG 0.696070 tig0027239:-49302 Msa1433210:CDS
GTGGTCGTGATGATACACTC+AGG 0.697269 tig0027239:-44834 Msa1433210:CDS
GAATTGGCGAGTAAGGATTG+GGG 0.697779 tig0027239:-44355 Msa1433210:three_prime_UTR
TGAGCCATCTTCTAAAGACG+TGG 0.710607 tig0027239:-45178 Msa1433210:intron
ATATACAGAGCAATCAACAA+GGG 0.716709 tig0027239:+44685 None:intergenic
GCAGACTATCTACTACTCAG+AGG 0.717657 tig0027239:-44918 Msa1433210:CDS
GTACAAAATATGCATCACAA+GGG 0.738084 tig0027239:+44413 None:intergenic
CCGTGACGAGAAGAGCTACG+CGG 0.803013 tig0027239:+45036 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTAAATAAACATTAATTT+GGG + tig0027239:47430-47449 None:intergenic 10.0%
!! AAACTAAATAAACATTAATT+TGG + tig0027239:47431-47450 None:intergenic 10.0%
!! TTAAATATTTAAGAAAATAC+AGG + tig0027239:47926-47945 None:intergenic 10.0%
!!! CTTTTTTTATTTTAATAACT+CGG - tig0027239:49154-49173 Msa1433210:intron 10.0%
!!! TTTTTTTATTTTAATAACTC+GGG - tig0027239:49155-49174 Msa1433210:intron 10.0%
!!! TTTAGAAATTTGTTAATATA+TGG - tig0027239:50890-50909 Msa1433210:five_prime_UTR 10.0%
!! AAATAGGTAAAATATGAAAA+GGG + tig0027239:44484-44503 None:intergenic 15.0%
!! AAAATAGGTAAAATATGAAA+AGG + tig0027239:44485-44504 None:intergenic 15.0%
!!! TAAAAATTCCTTTCTTTTAA+AGG + tig0027239:45467-45486 None:intergenic 15.0%
!!! TTAAAAGAAAGGAATTTTTA+AGG - tig0027239:45467-45486 Msa1433210:intron 15.0%
!!! TAAATTTCATTCTTTAGTTT+AGG + tig0027239:47026-47045 None:intergenic 15.0%
!!! TATTATTTAGTTTTGATAGT+TGG - tig0027239:47674-47693 Msa1433210:intron 15.0%
!!! AAATTTTATAAGGATGTAAA+TGG - tig0027239:48631-48650 Msa1433210:intron 15.0%
!!! AATTTTATAAGGATGTAAAT+GGG - tig0027239:48632-48651 Msa1433210:intron 15.0%
!!! ATTATTAAATGATGATGATT+TGG + tig0027239:50543-50562 None:intergenic 15.0%
!!! TTTGAAATTTAGCTTGAATT+AGG - tig0027239:44816-44835 Msa1433210:CDS 20.0%
!!! GTTGCTATATTTTTGTTTAT+TGG - tig0027239:45365-45384 Msa1433210:intron 20.0%
!! TTAGAGACATAACTAATAAA+TGG - tig0027239:45597-45616 Msa1433210:CDS 20.0%
!! TAATAAATGGAAAGATCATA+TGG - tig0027239:45610-45629 Msa1433210:CDS 20.0%
!! AAAGATCAAGCTAATTAAAA+AGG + tig0027239:45872-45891 None:intergenic 20.0%
!!! AGCTTTCTTTTAAAAGTATA+GGG + tig0027239:46472-46491 None:intergenic 20.0%
!!! ATTTTTACTTATAAGCAACT+CGG - tig0027239:46497-46516 Msa1433210:CDS 20.0%
!! AAAGTAAATAATCTATCCTA+TGG + tig0027239:46848-46867 None:intergenic 20.0%
!! TAAATAATCCCAATAAATAG+AGG + tig0027239:46949-46968 None:intergenic 20.0%
!! GTGAAAAATATGAAAAGTAA+AGG - tig0027239:46994-47013 Msa1433210:intron 20.0%
!!! ATCCTTCTTTTATAGATTTA+AGG - tig0027239:47309-47328 Msa1433210:intron 20.0%
!! TTCCTTAAATCTATAAAAGA+AGG + tig0027239:47314-47333 None:intergenic 20.0%
!!! TTTTATAGATTTAAGGAATC+AGG - tig0027239:47316-47335 Msa1433210:intron 20.0%
!! TAATTTGGGTATATCAATAT+TGG + tig0027239:47416-47435 None:intergenic 20.0%
!! CAAAAGTAATCATAATATCA+AGG + tig0027239:47611-47630 None:intergenic 20.0%
!!! CTTGATATTATGATTACTTT+TGG - tig0027239:47609-47628 Msa1433210:intron 20.0%
!!! TAGGATTTTTATGAACTAAT+TGG - tig0027239:47728-47747 Msa1433210:intron 20.0%
!!! ATTTTACTACTTTTTCTACT+TGG - tig0027239:47785-47804 Msa1433210:intron 20.0%
!!! TTACTTCCATTTTGATTTTT+AGG - tig0027239:47829-47848 Msa1433210:intron 20.0%
!! AGAATACCTAAAAATCAAAA+TGG + tig0027239:47838-47857 None:intergenic 20.0%
!! GTATTAAAAAAACACTAAGT+TGG - tig0027239:48122-48141 Msa1433210:intron 20.0%
!!! AATTGTTTTTAATACATTGC+AGG - tig0027239:48231-48250 Msa1433210:intron 20.0%
!!! CAATGTTTTTAAACTTCAAA+AGG + tig0027239:48403-48422 None:intergenic 20.0%
!!! AGTTTAAAAACATTGTTTTG+TGG - tig0027239:48408-48427 Msa1433210:intron 20.0%
!!! TTATTTTAACATAAATGAGC+TGG + tig0027239:48505-48524 None:intergenic 20.0%
!! TAATCAAAACAATCACATAA+AGG + tig0027239:49304-49323 None:intergenic 20.0%
!!! TTTTGATTACTAGAATACTT+GGG - tig0027239:49315-49334 Msa1433210:CDS 20.0%
!! TTCTTTGCAACATATATAAT+TGG + tig0027239:49370-49389 None:intergenic 20.0%
!!! ATTTTTCCCTCTAATAATAA+TGG - tig0027239:49899-49918 Msa1433210:intron 20.0%
!! AATATGCCATTATTATTAGA+GGG + tig0027239:49908-49927 None:intergenic 20.0%
!! TAAAGTTCTATTGTTCTTTA+TGG - tig0027239:49937-49956 Msa1433210:intron 20.0%
!! TGCTACAAAAATTAAGAATT+AGG + tig0027239:50344-50363 None:intergenic 20.0%
! AAAGAAAAGTGGAAAGAAAA+TGG + tig0027239:44296-44315 None:intergenic 25.0%
! AATTAAGATAGTGAATAGTG+TGG + tig0027239:44410-44429 None:intergenic 25.0%
!! TCATATTTTACCTATTTTCG+AGG - tig0027239:44487-44506 Msa1433210:three_prime_UTR 25.0%
!!! GTTTTCTTTTTTGAGGTATT+GGG - tig0027239:44655-44674 Msa1433210:three_prime_UTR 25.0%
!! ACACTTTTGTATCTCAATTT+TGG - tig0027239:44711-44730 Msa1433210:three_prime_UTR 25.0%
!!! ACCTTATATATTGTTTTGCT+AGG - tig0027239:44950-44969 Msa1433210:CDS 25.0%
! TCCTAGCAAAACAATATATA+AGG + tig0027239:44954-44973 None:intergenic 25.0%
!!! TGAAGTTATTGACTTCTATT+GGG - tig0027239:45083-45102 Msa1433210:intron 25.0%
!!! GCATAGATGGTTTTTTTTTT+TGG - tig0027239:45135-45154 Msa1433210:intron 25.0%
! AAACAATATGCATGTCAATA+AGG - tig0027239:45195-45214 Msa1433210:CDS 25.0%
! ATTTGACAATGAAAAACCTA+AGG - tig0027239:45508-45527 Msa1433210:intron 25.0%
! TTTGACAATGAAAAACCTAA+GGG - tig0027239:45509-45528 Msa1433210:intron 25.0%
!!! CTGTTTTTCTATTTTTCCAA+TGG + tig0027239:45758-45777 None:intergenic 25.0%
! AGAAAAACAGAGAAAACAAA+TGG - tig0027239:45768-45787 Msa1433210:CDS 25.0%
! TTGAGGGGAAAAATAATAAA+AGG + tig0027239:46153-46172 None:intergenic 25.0%
!! AACTCCAAACCATTTTAAAT+GGG + tig0027239:46307-46326 None:intergenic 25.0%
! ACTTGTTTAACTATTGCAAT+AGG - tig0027239:46379-46398 Msa1433210:intron 25.0%
!!! GAGCTTTCTTTTAAAAGTAT+AGG + tig0027239:46473-46492 None:intergenic 25.0%
! AATCACAACTGAAACTAATT+CGG + tig0027239:46706-46725 None:intergenic 25.0%
!!! TCAACTTAATTGATTTGATG+AGG - tig0027239:46758-46777 Msa1433210:intron 25.0%
! GAGATCATTAGGAAATTATT+AGG + tig0027239:46805-46824 None:intergenic 25.0%
!! AAAGTATTAAAGGAAAAGCA+AGG + tig0027239:46900-46919 None:intergenic 25.0%
!! ATTTCATTCTTTAGTTTAGG+AGG + tig0027239:47023-47042 None:intergenic 25.0%
! TATTCTTCCATATATATCGA+GGG + tig0027239:47096-47115 None:intergenic 25.0%
! ATATTCTTCCATATATATCG+AGG + tig0027239:47097-47116 None:intergenic 25.0%
!!! CTAAGATGTTATGTTTTGAA+TGG - tig0027239:47267-47286 Msa1433210:intron 25.0%
!!! ATGTTATGTTTTGAATGGAA+GGG - tig0027239:47272-47291 Msa1433210:intron 25.0%
!!! TATGTGTTTCTGGAAATAAA+AGG + tig0027239:47358-47377 None:intergenic 25.0%
!!! TCTTGCTTTAAGATAGAAAA+TGG + tig0027239:47563-47582 None:intergenic 25.0%
! TATACACAATTCAACTATGT+AGG - tig0027239:47709-47728 Msa1433210:intron 25.0%
!!! GATTTTTAGGTATTCTTTTC+AGG - tig0027239:47842-47861 Msa1433210:intron 25.0%
!!! TTTAACTTGATTTCCAAGAA+TGG + tig0027239:48041-48060 None:intergenic 25.0%
!!! ATTCTGTGCTGATTTTTTTT+TGG - tig0027239:48193-48212 Msa1433210:intron 25.0%
! CAGGTATACATAATTGATTA+CGG - tig0027239:48250-48269 Msa1433210:intron 25.0%
! TTAAACTTCAAAAGGTGAAA+AGG + tig0027239:48395-48414 None:intergenic 25.0%
!!! TAGACTTCATATTCCTTTTT+TGG - tig0027239:48527-48546 Msa1433210:intron 25.0%
! ATCATTATGTATTCAAGACA+AGG + tig0027239:48572-48591 None:intergenic 25.0%
!! CAGACAGGTTAAATTTTATA+AGG - tig0027239:48621-48640 Msa1433210:intron 25.0%
!! CAAGTTTGGGAATATTATTT+TGG + tig0027239:48702-48721 None:intergenic 25.0%
! AACGATAAATAAACAAGTGA+TGG + tig0027239:48785-48804 None:intergenic 25.0%
!!! GTTTTGATTACTAGAATACT+TGG - tig0027239:49314-49333 Msa1433210:CDS 25.0%
! AAGTATGATGTAAATTCCAA+CGG + tig0027239:49436-49455 None:intergenic 25.0%
! GAATTCAAATTTAACCTTCT+CGG + tig0027239:49537-49556 None:intergenic 25.0%
! ATTTAGTAATGTTTCTTCAC+AGG - tig0027239:49594-49613 Msa1433210:intron 25.0%
! AGTTTGATTATGTGTTTGAT+TGG - tig0027239:49622-49641 Msa1433210:intron 25.0%
!! ATATTGAAGTATCCACAAAT+TGG - tig0027239:49648-49667 Msa1433210:intron 25.0%
!!! TGTATTTCTAGCAAAACTAA+AGG - tig0027239:49743-49762 Msa1433210:intron 25.0%
! GAATATGCCATTATTATTAG+AGG + tig0027239:49909-49928 None:intergenic 25.0%
! GATTGTTATGCTTATATTTC+AGG - tig0027239:50107-50126 Msa1433210:intron 25.0%
!! TATATTTTCCATCCAATGTT+GGG - tig0027239:50749-50768 Msa1433210:five_prime_UTR 25.0%
! TCATAAAGAAATTCCTTGAA+TGG + tig0027239:50776-50795 None:intergenic 25.0%
! ATTTCTTTATGAAGAAGCTT+TGG - tig0027239:50784-50803 Msa1433210:five_prime_UTR 25.0%
!!! ATTTTTTTCTGCTGAAGAAA+AGG - tig0027239:50937-50956 Msa1433210:five_prime_UTR 25.0%
! AAAATTGCTATGTAAGTTTC+TGG - tig0027239:50979-50998 Msa1433210:five_prime_UTR 25.0%
!!! ACAAATTGATGATTTGTTCA+AGG + tig0027239:51105-51124 None:intergenic 25.0%
!! TTTTTGCTTAAATGCAGTTT+TGG - tig0027239:51137-51156 Msa1433210:five_prime_UTR 25.0%
!!! TTGCAGTTTTAGCAAAATAA+GGG + tig0027239:51165-51184 None:intergenic 25.0%
!!! ATTGCAGTTTTAGCAAAATA+AGG + tig0027239:51166-51185 None:intergenic 25.0%
! AATTTTGCTGGGAAAATTTC+GGG + tig0027239:44333-44352 None:intergenic 30.0%
! GAATTTTGCTGGGAAAATTT+CGG + tig0027239:44334-44353 None:intergenic 30.0%
TTAAATTTGAGTCGATGAAG+TGG + tig0027239:44445-44464 None:intergenic 30.0%
!! TTTGTGGGTTTTCTTTTTTG+AGG - tig0027239:44648-44667 Msa1433210:three_prime_UTR 30.0%
!!! GGTTTTCTTTTTTGAGGTAT+TGG - tig0027239:44654-44673 Msa1433210:three_prime_UTR 30.0%
TAAGATTGTGCTGGAAATAT+AGG - tig0027239:44737-44756 Msa1433210:three_prime_UTR 30.0%
!! TTTAGCTTGAATTAGGAGAT+TGG - tig0027239:44823-44842 Msa1433210:CDS 30.0%
! TTAGCTTGAATTAGGAGATT+GGG - tig0027239:44824-44843 Msa1433210:CDS 30.0%
! TCGTTTTCTATGCTTTTGTT+TGG - tig0027239:45009-45028 Msa1433210:CDS 30.0%
!! GTGAAGTTATTGACTTCTAT+TGG - tig0027239:45082-45101 Msa1433210:intron 30.0%
!!! AGGAATGTTGATTTTTCTAC+TGG - tig0027239:45111-45130 Msa1433210:intron 30.0%
TGGTTACTTGAATTTCAGTT+AGG - tig0027239:45385-45404 Msa1433210:intron 30.0%
! ACATGTTGCCTTTAAAAGAA+AGG - tig0027239:45456-45475 Msa1433210:intron 30.0%
TTTAAGGATAACGATTGAGT+TGG - tig0027239:45483-45502 Msa1433210:intron 30.0%
ATGGCTATAGTATGATCAAA+TGG - tig0027239:45629-45648 Msa1433210:intron 30.0%
CAGACTATATTTGTAACCAT+TGG - tig0027239:45739-45758 Msa1433210:intron 30.0%
AAGCTAATTAAAAAGGATGC+TGG + tig0027239:45865-45884 None:intergenic 30.0%
! AGCTTGATCTTTTAAACAAC+TGG - tig0027239:45880-45899 Msa1433210:intron 30.0%
TGAATGCAGAAATGAAAATC+TGG + tig0027239:45958-45977 None:intergenic 30.0%
TGACAAACAAAGGAAGAAAA+AGG + tig0027239:46048-46067 None:intergenic 30.0%
!! TTTTTCTTCCTTTGTTTGTC+AGG - tig0027239:46047-46066 Msa1433210:intron 30.0%
AAATTGTACATGCTTCTTCA+AGG - tig0027239:46111-46130 Msa1433210:intron 30.0%
AATTGTACATGCTTCTTCAA+GGG - tig0027239:46112-46131 Msa1433210:intron 30.0%
! ATGAAGAAGCATAATTTGAG+GGG + tig0027239:46168-46187 None:intergenic 30.0%
! GATGAAGAAGCATAATTTGA+GGG + tig0027239:46169-46188 None:intergenic 30.0%
! AGATGAAGAAGCATAATTTG+AGG + tig0027239:46170-46189 None:intergenic 30.0%
!! TTCCTCTTTTCTTTTTGAAG+CGG - tig0027239:46275-46294 Msa1433210:intron 30.0%
! ATTCCCCATTTAAAATGGTT+TGG - tig0027239:46300-46319 Msa1433210:intron 30.0%
! ACTCCAAACCATTTTAAATG+GGG + tig0027239:46306-46325 None:intergenic 30.0%
! CAACTCCAAACCATTTTAAA+TGG + tig0027239:46308-46327 None:intergenic 30.0%
! TTTAAAATGGTTTGGAGTTG+AGG - tig0027239:46308-46327 Msa1433210:intron 30.0%
! TTAAAATGGTTTGGAGTTGA+GGG - tig0027239:46309-46328 Msa1433210:intron 30.0%
! AAAGCCTGACAACTTTTTAA+TGG - tig0027239:46579-46598 Msa1433210:intron 30.0%
! AAGCCTGACAACTTTTTAAT+GGG - tig0027239:46580-46599 Msa1433210:intron 30.0%
AAACCCATTAAAAAGTTGTC+AGG + tig0027239:46586-46605 None:intergenic 30.0%
!!! GACAACTTTTTAATGGGTTT+AGG - tig0027239:46586-46605 Msa1433210:intron 30.0%
ATAATCTATCCTATGGATAG+TGG + tig0027239:46841-46860 None:intergenic 30.0%
TATTAAAGGAAAAGCAAGGT+CGG + tig0027239:46896-46915 None:intergenic 30.0%
! TGGGTGAGATAAAGTATTAA+AGG + tig0027239:46910-46929 None:intergenic 30.0%
AATCGTACTCGTATTTATTG+AGG - tig0027239:46972-46991 Msa1433210:intron 30.0%
! ATCTTTTTGTTAAGATGCCA+TGG + tig0027239:47199-47218 None:intergenic 30.0%
!! GATGTTATGTTTTGAATGGA+AGG - tig0027239:47271-47290 Msa1433210:intron 30.0%
!! TGTTATGTTTTGAATGGAAG+GGG - tig0027239:47273-47292 Msa1433210:intron 30.0%
! AACTGCAATGAAGTTTTACA+TGG + tig0027239:47464-47483 None:intergenic 30.0%
! TTCATGTCTCTAATTTTGAG+AGG - tig0027239:47511-47530 Msa1433210:intron 30.0%
TAATATCAAGGCTGACAAAT+GGG + tig0027239:47599-47618 None:intergenic 30.0%
ATAATATCAAGGCTGACAAA+TGG + tig0027239:47600-47619 None:intergenic 30.0%
! AATTGGACAGTATTTCTACT+AGG - tig0027239:47745-47764 Msa1433210:intron 30.0%
AACAGAACTCAATGAATCAA+AGG + tig0027239:47811-47830 None:intergenic 30.0%
GAATTAGATGTAACTACAGA+AGG + tig0027239:47902-47921 None:intergenic 30.0%
GAATTGAAAAATTGTACTCC+TGG - tig0027239:47956-47975 Msa1433210:intron 30.0%
TTTCCAAGAATGGCTTATTA+TGG + tig0027239:48031-48050 None:intergenic 30.0%
GGAAATCAAGTTAAACATGA+AGG - tig0027239:48046-48065 Msa1433210:intron 30.0%
! TGTTTGAGTCTGAATTTGTT+TGG + tig0027239:48075-48094 None:intergenic 30.0%
! CTAAATTTGTTCCTTGAGTA+CGG - tig0027239:48352-48371 Msa1433210:intron 30.0%
! TAAATTTGTTCCTTGAGTAC+GGG - tig0027239:48353-48372 Msa1433210:intron 30.0%
!!! TATTCCTTTTTTGGATTCCT+TGG - tig0027239:48536-48555 Msa1433210:intron 30.0%
!!! ATTCCTTTTTTGGATTCCTT+GGG - tig0027239:48537-48556 Msa1433210:intron 30.0%
!!! ATTATTTTGGATGCTGATTC+AGG + tig0027239:48689-48708 None:intergenic 30.0%
! TTGTGCTAATCAACTCTTTT+CGG - tig0027239:49767-49786 Msa1433210:intron 30.0%
TGTTATGCTTATATTTCAGG+TGG - tig0027239:50110-50129 Msa1433210:intron 30.0%
!! CCTTCATAACAAAGTTTTGA+AGG + tig0027239:50297-50316 None:intergenic 30.0%
! CCTTCAAAACTTTGTTATGA+AGG - tig0027239:50294-50313 Msa1433210:intron 30.0%
TCATTTAATAATCGTGCTTC+TGG - tig0027239:50551-50570 Msa1433210:CDS 30.0%
CATTTAATAATCGTGCTTCT+GGG - tig0027239:50552-50571 Msa1433210:CDS 30.0%
ATTTAATAATCGTGCTTCTG+GGG - tig0027239:50553-50572 Msa1433210:CDS 30.0%
ATATACAGAGCAATCAACAA+GGG + tig0027239:50734-50753 None:intergenic 30.0%
AATATACAGAGCAATCAACA+AGG + tig0027239:50735-50754 None:intergenic 30.0%
! GTATATTTTCCATCCAATGT+TGG - tig0027239:50748-50767 Msa1433210:five_prime_UTR 30.0%
AACACCAAAAGAGATATAAG+AGG + tig0027239:50816-50835 None:intergenic 30.0%
GTACAAAATATGCATCACAA+GGG + tig0027239:51006-51025 None:intergenic 30.0%
TATGTTCTAGTGTACATTCA+TGG - tig0027239:51034-51053 Msa1433210:five_prime_UTR 30.0%
!! TGCAGTTTTAGCAAAATAAG+GGG + tig0027239:51164-51183 None:intergenic 30.0%
GATGTGGAAAGAACAGAAAA+TGG + tig0027239:44226-44245 None:intergenic 35.0%
AAAAGTTGTGATGTGAAGTC+AGG + tig0027239:44261-44280 None:intergenic 35.0%
AATAGTGTGGAAAGAGGATA+TGG + tig0027239:44397-44416 None:intergenic 35.0%
ATAGTGAATAGTGTGGAAAG+AGG + tig0027239:44403-44422 None:intergenic 35.0%
! TGAAAAGGGTGTGAGAAAAA+TGG + tig0027239:44470-44489 None:intergenic 35.0%
!! TACCTATTTTCGAGGAAAAG+AGG - tig0027239:44495-44514 Msa1433210:three_prime_UTR 35.0%
! TTCCTCTTTTCCTCGAAAAT+AGG + tig0027239:44500-44519 None:intergenic 35.0%
! TTTTCTCTCTGTTCTGTTTG+TGG - tig0027239:44632-44651 Msa1433210:three_prime_UTR 35.0%
TTTCTCTCTGTTCTGTTTGT+GGG - tig0027239:44633-44652 Msa1433210:three_prime_UTR 35.0%
!! TTTTGGATCTAAGATTGTGC+TGG - tig0027239:44728-44747 Msa1433210:three_prime_UTR 35.0%
AATTGATGTGTGTAGTAGAG+TGG - tig0027239:44792-44811 Msa1433210:CDS 35.0%
!! GTGATGATGGATCATGTAAT+TGG - tig0027239:44851-44870 Msa1433210:CDS 35.0%
!! ATGATGGATCATGTAATTGG+TGG - tig0027239:44854-44873 Msa1433210:CDS 35.0%
ATTGGTGGAAAATTCAAGCT+CGG - tig0027239:44869-44888 Msa1433210:CDS 35.0%
!! TCTATGCTTTTGTTTGGTTC+AGG - tig0027239:45015-45034 Msa1433210:CDS 35.0%
TCAGGTGTTAATGTACAAAC+TGG - tig0027239:45033-45052 Msa1433210:CDS 35.0%
TGTTAATGTACAAACTGGAG+AGG - tig0027239:45038-45057 Msa1433210:CDS 35.0%
AGAGGAAGTTGCTCTTAAAT+TGG - tig0027239:45056-45075 Msa1433210:CDS 35.0%
! TTTTTCTACTGGTGCATAGA+TGG - tig0027239:45122-45141 Msa1433210:intron 35.0%
CAATGCATTGCAATATGAAG+GGG + tig0027239:45293-45312 None:intergenic 35.0%
GCAATGCATTGCAATATGAA+GGG + tig0027239:45294-45313 None:intergenic 35.0%
ATGAAAAACCTAAGGGAGAT+TGG - tig0027239:45516-45535 Msa1433210:intron 35.0%
ACATAATGTACCTAGAGTCT+TGG - tig0027239:45678-45697 Msa1433210:intron 35.0%
GTTTACATCATTTGACATGC+TGG - tig0027239:45806-45825 Msa1433210:intron 35.0%
CAATATCTATCCACATCTGT+TGG - tig0027239:45838-45857 Msa1433210:intron 35.0%
!! AGCTTAACTTTGAAACAGCT+AGG + tig0027239:46008-46027 None:intergenic 35.0%
ATTGTACATGCTTCTTCAAG+GGG - tig0027239:46113-46132 Msa1433210:intron 35.0%
!!! TCCTCTTTTCTTTTTGAAGC+GGG - tig0027239:46276-46295 Msa1433210:intron 35.0%
TTAAACAAGTCTTCCAGACT+TGG + tig0027239:46369-46388 None:intergenic 35.0%
! AGTTGTCAGGCTTTATATCA+CGG + tig0027239:46573-46592 None:intergenic 35.0%
CATAAATGACCAACCAGATA+AGG + tig0027239:46663-46682 None:intergenic 35.0%
ACTACACACTAGAGATCATT+AGG + tig0027239:46816-46835 None:intergenic 35.0%
AATAAATAGAGGCTACACAC+AGG + tig0027239:46938-46957 None:intergenic 35.0%
TGTGTGTAGCCTCTATTTAT+TGG - tig0027239:46937-46956 Msa1433210:intron 35.0%
GTGTGTAGCCTCTATTTATT+GGG - tig0027239:46938-46957 Msa1433210:intron 35.0%
TTCCATTCCCTCGATATATA+TGG - tig0027239:47086-47105 Msa1433210:intron 35.0%
TTCCATATATATCGAGGGAA+TGG + tig0027239:47091-47110 None:intergenic 35.0%
!! ACAACATGGCTTTATCAGAT+CGG + tig0027239:47150-47169 None:intergenic 35.0%
CCAAGACAGAGAATGTTATT+TGG + tig0027239:47231-47250 None:intergenic 35.0%
CCAAATAACATTCTCTGTCT+TGG - tig0027239:47228-47247 Msa1433210:intron 35.0%
AGTTGAAAGCTATGTGTTTC+TGG + tig0027239:47368-47387 None:intergenic 35.0%
AATATCAAGGCTGACAAATG+GGG + tig0027239:47598-47617 None:intergenic 35.0%
TACTAGGAGTCTGTTTATTG+AGG - tig0027239:47761-47780 Msa1433210:intron 35.0%
TAGATGTAACTACAGAAGGT+GGG + tig0027239:47898-47917 None:intergenic 35.0%
TTAGATGTAACTACAGAAGG+TGG + tig0027239:47899-47918 None:intergenic 35.0%
! ATAGTGTGTAGTTGGTTCTT+AGG + tig0027239:47987-48006 None:intergenic 35.0%
AGACCATAATAAGCCATTCT+TGG - tig0027239:48025-48044 Msa1433210:intron 35.0%
TCAGACTCAAACAATGTCAT+AGG - tig0027239:48082-48101 Msa1433210:intron 35.0%
AAACAAACATGGTACCTGTA+TGG + tig0027239:48319-48338 None:intergenic 35.0%
CATGCTACAGTAAACAAACA+TGG + tig0027239:48330-48349 None:intergenic 35.0%
! AAATTTGTTCCTTGAGTACG+GGG - tig0027239:48354-48373 Msa1433210:intron 35.0%
GGTGAAAAGGAAACATGATA+TGG + tig0027239:48382-48401 None:intergenic 35.0%
ACAGAAGCAAACAACATACT+GGG + tig0027239:48441-48460 None:intergenic 35.0%
TACAGAAGCAAACAACATAC+TGG + tig0027239:48442-48461 None:intergenic 35.0%
CATAATGATTGTTGTGTTGC+TGG - tig0027239:48583-48602 Msa1433210:intron 35.0%
! ATTGTTGTGTTGCTGGATTT+GGG - tig0027239:48590-48609 Msa1433210:intron 35.0%
CTTCAGGTAATGACACATAT+GGG + tig0027239:48762-48781 None:intergenic 35.0%
AATAAACAAGTGATGGCTTC+AGG + tig0027239:48778-48797 None:intergenic 35.0%
ATGGTCATTCACAGAAGAAA+AGG + tig0027239:48847-48866 None:intergenic 35.0%
! TTTTCTTCTGTGAATGACCA+TGG - tig0027239:48846-48865 Msa1433210:CDS 35.0%
AGTATTAACACTTGCATACC+GGG + tig0027239:48911-48930 None:intergenic 35.0%
GAGTATTAACACTTGCATAC+CGG + tig0027239:48912-48931 None:intergenic 35.0%
GCAAGTGTTAATACTCATCT+AGG - tig0027239:48916-48935 Msa1433210:intron 35.0%
GTTAATACTCATCTAGGAGT+TGG - tig0027239:48922-48941 Msa1433210:intron 35.0%
!! GTACTCATGTACTTTTTGAG+AGG - tig0027239:49088-49107 Msa1433210:CDS 35.0%
!! TCATGTACTTTTTGAGAGGA+AGG - tig0027239:49092-49111 Msa1433210:CDS 35.0%
CTCTTGAGATACGAATAATC+AGG + tig0027239:49493-49512 None:intergenic 35.0%
TTTAACCTTCTCGGATGAAT+AGG + tig0027239:49528-49547 None:intergenic 35.0%
! ACAAATTGGATCTAGTTCCA+GGG - tig0027239:49662-49681 Msa1433210:intron 35.0%
ACACAACACTTCACAAAATG+AGG + tig0027239:49716-49735 None:intergenic 35.0%
!!! TTCTTTTTCAACAGCCAAGT+GGG - tig0027239:49790-49809 Msa1433210:intron 35.0%
ATTTCAGTCCTACAGTTGTA+TGG - tig0027239:50056-50075 Msa1433210:intron 35.0%
TCCTACAGTTGTATGGTAAA+AGG - tig0027239:50063-50082 Msa1433210:intron 35.0%
TTGTTTGTCAGTTTGTGTGT+TGG - tig0027239:50268-50287 Msa1433210:intron 35.0%
TGTTTGTCAGTTTGTGTGTT+GGG - tig0027239:50269-50288 Msa1433210:intron 35.0%
! GACTCCTCTTATATCTCTTT+TGG - tig0027239:50809-50828 Msa1433210:five_prime_UTR 35.0%
CTTCCATGAATATTTCAGCA+TGG - tig0027239:50836-50855 Msa1433210:five_prime_UTR 35.0%
CATCCATGCTGAAATATTCA+TGG + tig0027239:50842-50861 None:intergenic 35.0%
CATGAATATTTCAGCATGGA+TGG - tig0027239:50840-50859 Msa1433210:five_prime_UTR 35.0%
GGCTGCTTGTAATAATTACA+TGG - tig0027239:50911-50930 Msa1433210:five_prime_UTR 35.0%
GGTACAAAATATGCATCACA+AGG + tig0027239:51007-51026 None:intergenic 35.0%
TACACTAGAACATAGTACTC+AGG + tig0027239:51028-51047 None:intergenic 35.0%
TCTAGTGTACATTCATGGAA+TGG - tig0027239:51039-51058 Msa1433210:five_prime_UTR 35.0%
GTACATTCATGGAATGGAAT+TGG - tig0027239:51045-51064 Msa1433210:five_prime_UTR 35.0%
! GATTTGTTCAAGGAGAAGAT+TGG + tig0027239:51095-51114 None:intergenic 35.0%
!! CCACTTTTCTTTCCTTTTCC+CGG - tig0027239:44304-44323 Msa1433210:three_prime_UTR 40.0%
! GACAAGGTGTGAATTTTGCT+GGG + tig0027239:44344-44363 None:intergenic 40.0%
!!! ATATGGATTGGTGTGGGTTT+TGG + tig0027239:44380-44399 None:intergenic 40.0%
!! AAGAGGATATGGATTGGTGT+GGG + tig0027239:44386-44405 None:intergenic 40.0%
!! AAAGAGGATATGGATTGGTG+TGG + tig0027239:44387-44406 None:intergenic 40.0%
TGTGGAAAGAGGATATGGAT+TGG + tig0027239:44392-44411 None:intergenic 40.0%
TGAGTCGATGAAGTGGAATT+GGG + tig0027239:44438-44457 None:intergenic 40.0%
TTGAGTCGATGAAGTGGAAT+TGG + tig0027239:44439-44458 None:intergenic 40.0%
!! ATCGATTTTGCGTGCAATTC+AGG - tig0027239:44547-44566 Msa1433210:three_prime_UTR 40.0%
! TCGATTTTGCGTGCAATTCA+GGG - tig0027239:44548-44567 Msa1433210:three_prime_UTR 40.0%
!! GAGATTGGGTTTTGTGATGA+TGG - tig0027239:44838-44857 Msa1433210:CDS 40.0%
TTCAAGCTCGGAAGGAAAAT+TGG - tig0027239:44881-44900 Msa1433210:CDS 40.0%
!! AAAATTGGTGGTGGGTCATT+TGG - tig0027239:44896-44915 Msa1433210:CDS 40.0%
TCATTTGGAGAGCTCTACTT+GGG - tig0027239:44911-44930 Msa1433210:CDS 40.0%
TTGACTTCTATTGGGTGCTT+AGG - tig0027239:45091-45110 Msa1433210:intron 40.0%
GGCAATGCATTGCAATATGA+AGG + tig0027239:45295-45314 None:intergenic 40.0%
!! CATAGCTAAGTTGGTACTAG+GGG + tig0027239:45316-45335 None:intergenic 40.0%
!! GCATAGCTAAGTTGGTACTA+GGG + tig0027239:45317-45336 None:intergenic 40.0%
!! AGCATAGCTAAGTTGGTACT+AGG + tig0027239:45318-45337 None:intergenic 40.0%
TACCAACTTAGCTATGCTCA+CGG - tig0027239:45320-45339 Msa1433210:intron 40.0%
GTACAATATGCCAAGACTCT+AGG + tig0027239:45691-45710 None:intergenic 40.0%
GCATTCAGTCAGTCTTAGTT+TGG - tig0027239:45971-45990 Msa1433210:CDS 40.0%
GTAGTGAAGTTGAGGATGTT+TGG + tig0027239:46085-46104 None:intergenic 40.0%
! TTTGACTCGTAGTGAAGTTG+AGG + tig0027239:46093-46112 None:intergenic 40.0%
TTGTACATGCTTCTTCAAGG+GGG - tig0027239:46114-46133 Msa1433210:intron 40.0%
ACCCGCTTCAAAAAGAAAAG+AGG + tig0027239:46280-46299 None:intergenic 40.0%
CGGGTATTCCCCATTTAAAA+TGG - tig0027239:46295-46314 Msa1433210:intron 40.0%
TGCAGATCAGCTAGTAAGTA+TGG - tig0027239:46431-46450 Msa1433210:intron 40.0%
! TTTAGGACGCAAAGCAAATC+AGG - tig0027239:46603-46622 Msa1433210:intron 40.0%
AGTCAATGCTGGATATGTAG+TGG + tig0027239:46631-46650 None:intergenic 40.0%
! GACTTGAATTCAGCCTTATC+TGG - tig0027239:46647-46666 Msa1433210:intron 40.0%
! TGAATTCAGCCTTATCTGGT+TGG - tig0027239:46651-46670 Msa1433210:intron 40.0%
GTGTAGTATCCACTATCCAT+AGG - tig0027239:46829-46848 Msa1433210:intron 40.0%
AGGCTACACACAGGTTTATT+GGG + tig0027239:46929-46948 None:intergenic 40.0%
! GGAGAGAAGCTTTAACAACA+TGG + tig0027239:47164-47183 None:intergenic 40.0%
TTAAGATGCCATGGCTTGAA+TGG + tig0027239:47190-47209 None:intergenic 40.0%
! GTTGGTTCTTAGGAAATACC+AGG + tig0027239:47977-47996 None:intergenic 40.0%
TGACTAGGATAGTGTGTAGT+TGG + tig0027239:47995-48014 None:intergenic 40.0%
GGTCTCAGCTTAAATTGACT+AGG + tig0027239:48010-48029 None:intergenic 40.0%
CAATGTCATAGGAACTTGAC+AGG - tig0027239:48093-48112 Msa1433210:intron 40.0%
CAGCACAGAATTTCAGCTAT+TGG + tig0027239:48184-48203 None:intergenic 40.0%
!!! GATCTCGGAACTTTTTTGCA+AGG + tig0027239:48276-48295 None:intergenic 40.0%
CACACAAGCATATACCATAC+AGG - tig0027239:48302-48321 Msa1433210:intron 40.0%
CAACCCAAGGAATCCAAAAA+AGG + tig0027239:48543-48562 None:intergenic 40.0%
! GATTGTTGTGTTGCTGGATT+TGG - tig0027239:48589-48608 Msa1433210:intron 40.0%
! GAGGATTTTCTTGCATATGC+AGG + tig0027239:48740-48759 None:intergenic 40.0%
GCTTCAGGTAATGACACATA+TGG + tig0027239:48763-48782 None:intergenic 40.0%
GAAAAGGAGACGAATGTGTA+GGG + tig0027239:48831-48850 None:intergenic 40.0%
AGAAAAGGAGACGAATGTGT+AGG + tig0027239:48832-48851 None:intergenic 40.0%
! TGACCATGGTACTTTTGTTC+AGG - tig0027239:48860-48879 Msa1433210:CDS 40.0%
! GACCATGGTACTTTTGTTCA+GGG - tig0027239:48861-48880 Msa1433210:CDS 40.0%
!! TTCCCTGAACAAAAGTACCA+TGG + tig0027239:48866-48885 None:intergenic 40.0%
AGGGAAAACAAAAACCTCAC+TGG - tig0027239:48880-48899 Msa1433210:CDS 40.0%
ACAAAGCAGAAGAGATGATC+TGG - tig0027239:49051-49070 Msa1433210:CDS 40.0%
! AGAGATGATCTGGAATCACT+TGG - tig0027239:49061-49080 Msa1433210:CDS 40.0%
GAAGATGCTTACTCCTATAG+AGG - tig0027239:49255-49274 Msa1433210:intron 40.0%
! GCGGGTTATAATACCTCTAT+AGG + tig0027239:49271-49290 None:intergenic 40.0%
TATCTTCAAACCGCAACGAT+CGG + tig0027239:49468-49487 None:intergenic 40.0%
CTGGAACTAGATCCAATTTG+TGG + tig0027239:49663-49682 None:intergenic 40.0%
! CACAAATTGGATCTAGTTCC+AGG - tig0027239:49661-49680 Msa1433210:intron 40.0%
! TGCTATTAAAGTACTCACCC+GGG + tig0027239:49688-49707 None:intergenic 40.0%
! GTGCTATTAAAGTACTCACC+CGG + tig0027239:49689-49708 None:intergenic 40.0%
!!! GTTCTTTTTCAACAGCCAAG+TGG - tig0027239:49789-49808 Msa1433210:intron 40.0%
!! TTTATGACTGGTTTCCCACT+TGG + tig0027239:49807-49826 None:intergenic 40.0%
GATTGTCCTGGATTTATGAC+TGG + tig0027239:49819-49838 None:intergenic 40.0%
GTCATAAATCCAGGACAATC+AGG - tig0027239:49819-49838 Msa1433210:intron 40.0%
AATCAGGAGAGAGAGTAGAA+CGG - tig0027239:49835-49854 Msa1433210:intron 40.0%
TGTTGAAGGAAGAAACCTGA+AGG + tig0027239:49861-49880 None:intergenic 40.0%
!! ATTCCAGATCTTGCTGTTGA+AGG + tig0027239:49875-49894 None:intergenic 40.0%
! GCCTTTTACCATACAACTGT+AGG + tig0027239:50067-50086 None:intergenic 40.0%
! AGTTGTATGGTAAAAGGCGT+TGG - tig0027239:50069-50088 Msa1433210:intron 40.0%
AGAGATTCGGGATAGATTCT+CGG - tig0027239:50136-50155 Msa1433210:intron 40.0%
TTTGCAAGAAGGAATGGATC+TGG - tig0027239:50173-50192 Msa1433210:intron 40.0%
! CTAACCACGTCTTTAGAAGA+TGG + tig0027239:50245-50264 None:intergenic 40.0%
! GCTTGATAAGACAGGTCTTT+TGG + tig0027239:50414-50433 None:intergenic 40.0%
AGACTTCTTGAGTCAAGCAA+GGG - tig0027239:50667-50686 Msa1433210:five_prime_UTR 40.0%
CATGTTGTCTCTTCGTGAAT+GGG + tig0027239:50867-50886 None:intergenic 40.0%
ACATGTTGTCTCTTCGTGAA+TGG + tig0027239:50868-50887 None:intergenic 40.0%
GTTGTGATGTGAAGTCAGGT+GGG + tig0027239:44257-44276 None:intergenic 45.0%
AGTTGTGATGTGAAGTCAGG+TGG + tig0027239:44258-44277 None:intergenic 45.0%
CCGGGAAAAGGAAAGAAAAG+TGG + tig0027239:44307-44326 None:intergenic 45.0%
AATTTCGGGATTCCGGGAAA+AGG + tig0027239:44319-44338 None:intergenic 45.0%
TGGGAAAATTTCGGGATTCC+GGG + tig0027239:44325-44344 None:intergenic 45.0%
CTGGGAAAATTTCGGGATTC+CGG + tig0027239:44326-44345 None:intergenic 45.0%
! GGACAAGGTGTGAATTTTGC+TGG + tig0027239:44345-44364 None:intergenic 45.0%
! TGGATCTGTCTTTGAGGACA+AGG + tig0027239:44360-44379 None:intergenic 45.0%
!!! GGGTTTTGGATCTGTCTTTG+AGG + tig0027239:44366-44385 None:intergenic 45.0%
GAGTCGATGAAGTGGAATTG+GGG + tig0027239:44437-44456 None:intergenic 45.0%
GTGGAAAATTCAAGCTCGGA+AGG - tig0027239:44873-44892 Msa1433210:CDS 45.0%
AAGCTCGGAAGGAAAATTGG+TGG - tig0027239:44884-44903 Msa1433210:CDS 45.0%
! TCGGAAGGAAAATTGGTGGT+GGG - tig0027239:44888-44907 Msa1433210:CDS 45.0%
GTCATTTGGAGAGCTCTACT+TGG - tig0027239:44910-44929 Msa1433210:CDS 45.0%
ACCAACTTAGCTATGCTCAC+GGG - tig0027239:45321-45340 Msa1433210:intron 45.0%
ACCTAAGGGAGATTGGTACT+TGG - tig0027239:45523-45542 Msa1433210:intron 45.0%
CACAGGTTCCTGACAAACAA+AGG + tig0027239:46058-46077 None:intergenic 45.0%
! TGAGGATGTTTGGTCTTCAC+AGG + tig0027239:46075-46094 None:intergenic 45.0%
TATCACGGTGAAGGAAACCA+CGG + tig0027239:46558-46577 None:intergenic 45.0%
! CAGGCTTTATATCACGGTGA+AGG + tig0027239:46567-46586 None:intergenic 45.0%
GGCTGAATTCAAGTCAATGC+TGG + tig0027239:46642-46661 None:intergenic 45.0%
GAGGCTACACACAGGTTTAT+TGG + tig0027239:46930-46949 None:intergenic 45.0%
CGGTGTAAAGCTTTCTTGCA+GGG + tig0027239:47130-47149 None:intergenic 45.0%
TCGGTGTAAAGCTTTCTTGC+AGG + tig0027239:47131-47150 None:intergenic 45.0%
!! TGTTTTGAATGGAAGGGGAC+TGG - tig0027239:47278-47297 Msa1433210:intron 45.0%
GCTTGTGTGTGTGAAGATCT+CGG + tig0027239:48291-48310 None:intergenic 45.0%
AGCAAACAACATACTGGGCA+GGG + tig0027239:48436-48455 None:intergenic 45.0%
AAGCAAACAACATACTGGGC+AGG + tig0027239:48437-48456 None:intergenic 45.0%
! GTTGCTGGATTTGGGATAAC+TGG - tig0027239:48598-48617 Msa1433210:intron 45.0%
! ATTTGGGATAACTGGCAGAC+AGG - tig0027239:48606-48625 Msa1433210:intron 45.0%
! GCAGGTGAAGGTTCAAGTTT+GGG + tig0027239:48715-48734 None:intergenic 45.0%
! AGCAGGTGAAGGTTCAAGTT+TGG + tig0027239:48716-48735 None:intergenic 45.0%
CAGGTAATGACACATATGGG+AGG + tig0027239:48759-48778 None:intergenic 45.0%
CAGCTTTCAAACCTTGCCAA+GGG + tig0027239:49198-49217 None:intergenic 45.0%
ACATAAAGGCTGCTTGCAAG+CGG + tig0027239:49290-49309 None:intergenic 45.0%
ATTGCATGAGTTTCTGCGTC+AGG - tig0027239:49393-49412 Msa1433210:intron 45.0%
GGGAAACCAGTCATAAATCC+AGG - tig0027239:49810-49829 Msa1433210:intron 45.0%
CTTCCTTCAACAGCAAGATC+TGG - tig0027239:49869-49888 Msa1433210:intron 45.0%
! GCGTTGGTCAAGTTCAACTA+AGG - tig0027239:50085-50104 Msa1433210:intron 45.0%
! TTTCAGGTGGACCAGAGATT+CGG - tig0027239:50123-50142 Msa1433210:intron 45.0%
GAGAATCTATCCCGAATCTC+TGG + tig0027239:50137-50156 None:intergenic 45.0%
GAGATTCGGGATAGATTCTC+GGG - tig0027239:50137-50156 Msa1433210:intron 45.0%
CAGTTCAGGCATTTGCAAGA+AGG - tig0027239:50162-50181 Msa1433210:intron 45.0%
CAGGCATTTGCAAGAAGGAA+TGG - tig0027239:50167-50186 Msa1433210:intron 45.0%
AATGATCACCATGCACACCA+TGG + tig0027239:50199-50218 None:intergenic 45.0%
CTCATCTGAAGATCTATGCC+TGG + tig0027239:50222-50241 None:intergenic 45.0%
! TGAGCCATCTTCTAAAGACG+TGG - tig0027239:50238-50257 Msa1433210:intron 45.0%
! TGTAGCAAGCTGATTCTGAG+AGG - tig0027239:50357-50376 Msa1433210:intron 45.0%
GTTCACCAGAAGAGTTTGGA+CGG + tig0027239:50439-50458 None:intergenic 45.0%
CTTGGTTCACCAGAAGAGTT+TGG + tig0027239:50443-50462 None:intergenic 45.0%
TGCTACTGCTCAAGAGCAAT+CGG + tig0027239:50481-50500 None:intergenic 45.0%
GCAGACTATCTACTACTCAG+AGG - tig0027239:50498-50517 Msa1433210:intron 45.0%
! GATGATTTGGACTCAAGACC+TGG + tig0027239:50530-50549 None:intergenic 45.0%
!! AGCTTTGAACTCCTGTCACT+TGG - tig0027239:50605-50624 Msa1433210:five_prime_UTR 45.0%
! TTTTTCCAGTGCCAAGTGAC+AGG + tig0027239:50619-50638 None:intergenic 45.0%
! TGTCACTTGGCACTGGAAAA+AGG - tig0027239:50618-50637 Msa1433210:five_prime_UTR 45.0%
CAGACTTCTTGAGTCAAGCA+AGG - tig0027239:50666-50685 Msa1433210:five_prime_UTR 45.0%
TGAATGGACCCAACATTGGA+TGG + tig0027239:50760-50779 None:intergenic 45.0%
TCCAATGTTGGGTCCATTCA+AGG - tig0027239:50760-50779 Msa1433210:five_prime_UTR 45.0%
TCCTTGAATGGACCCAACAT+TGG + tig0027239:50764-50783 None:intergenic 45.0%
TGGAATGGAATTGGCGAGTA+AGG - tig0027239:51054-51073 Msa1433210:five_prime_UTR 45.0%
TGGAATTGGCGAGTAAGGAT+TGG - tig0027239:51059-51078 Msa1433210:five_prime_UTR 45.0%
GGAATTGGCGAGTAAGGATT+GGG - tig0027239:51060-51079 Msa1433210:five_prime_UTR 45.0%
GAATTGGCGAGTAAGGATTG+GGG - tig0027239:51061-51080 Msa1433210:five_prime_UTR 45.0%
!!! ATATATATATATATTTTTTG+TGG - tig0027239:45248-45267 Msa1433210:CDS 5.0%
CAGGTGGGATAGATGAGATG+TGG + tig0027239:44242-44261 None:intergenic 50.0%
CTCGGAAGGAAAATTGGTGG+TGG - tig0027239:44887-44906 Msa1433210:CDS 50.0%
GTGGTCAAGTAGTAGCCTAG+TGG - tig0027239:45267-45286 Msa1433210:CDS 50.0%
TGCAATATGAAGGGGCCACT+AGG + tig0027239:45285-45304 None:intergenic 50.0%
CCAACTTAGCTATGCTCACG+GGG - tig0027239:45322-45341 Msa1433210:intron 50.0%
GCCAAGTACCAATCTCCCTT+AGG + tig0027239:45527-45546 None:intergenic 50.0%
! CTTGGCTGATTCCTTTGCGA+CGG - tig0027239:45541-45560 Msa1433210:intron 50.0%
ATCAGAAGTCACCGTCGCAA+AGG + tig0027239:45555-45574 None:intergenic 50.0%
TGAGGGTGACTACAATGCCA+TGG - tig0027239:46326-46345 Msa1433210:CDS 50.0%
TCCAAGGAGGTCAATTGCCA+TGG + tig0027239:46346-46365 None:intergenic 50.0%
! AGTCTTCCAGACTTGGTCCA+AGG + tig0027239:46362-46381 None:intergenic 50.0%
ATCACGGTGAAGGAAACCAC+GGG + tig0027239:46557-46576 None:intergenic 50.0%
ATGCCATGGCTTGAATGGAG+GGG + tig0027239:47185-47204 None:intergenic 50.0%
GATGCCATGGCTTGAATGGA+GGG + tig0027239:47186-47205 None:intergenic 50.0%
AGATGCCATGGCTTGAATGG+AGG + tig0027239:47187-47206 None:intergenic 50.0%
GATATGGAACCCCGTACTCA+AGG + tig0027239:48366-48385 None:intergenic 50.0%
GACAAGGTGAAGACAACCCA+AGG + tig0027239:48556-48575 None:intergenic 50.0%
TTCTTGCATATGCAGGCAGC+AGG + tig0027239:48733-48752 None:intergenic 50.0%
AAAACCTCACTGGAACTGCC+CGG - tig0027239:48890-48909 Msa1433210:CDS 50.0%
AACTGTTTCCCAGTCTCCCT+TGG - tig0027239:49179-49198 Msa1433210:intron 50.0%
AAACCTTGCCAAGGGAGACT+GGG + tig0027239:49190-49209 None:intergenic 50.0%
CCAGCTTTCAAACCTTGCCA+AGG + tig0027239:49199-49218 None:intergenic 50.0%
CCTTGGCAAGGTTTGAAAGC+TGG - tig0027239:49196-49215 Msa1433210:intron 50.0%
CATAAAGGCTGCTTGCAAGC+GGG + tig0027239:49289-49308 None:intergenic 50.0%
!! TCTGCGTCAGGTTTTGTGCA+AGG - tig0027239:49405-49424 Msa1433210:intron 50.0%
TTTGTGCAAGGCACATCCGT+TGG - tig0027239:49417-49436 Msa1433210:intron 50.0%
TCCATTACTGCCGATCGTTG+CGG - tig0027239:49455-49474 Msa1433210:intron 50.0%
CGTGACCTATTCATCCGAGA+AGG - tig0027239:49520-49539 Msa1433210:intron 50.0%
ACTCTCTCTCCTGATTGTCC+TGG + tig0027239:49831-49850 None:intergenic 50.0%
TTCAGGTGGACCAGAGATTC+GGG - tig0027239:50124-50143 Msa1433210:intron 50.0%
TAGATTCTCGGGTGCAGTTC+AGG - tig0027239:50148-50167 Msa1433210:intron 50.0%
AGAAGGAATGGATCTGGCCA+TGG - tig0027239:50179-50198 Msa1433210:intron 50.0%
GTGTGCATGGTGATCATTCC+AGG - tig0027239:50201-50220 Msa1433210:intron 50.0%
TCAAGAGCAATCGGCTAGAG+CGG + tig0027239:50472-50491 None:intergenic 50.0%
ACTACTCAGAGGACTCAACC+AGG - tig0027239:50509-50528 Msa1433210:CDS 50.0%
GTGGTCGTGATGATACACTC+AGG - tig0027239:50582-50601 Msa1433210:exon 50.0%
CTTGAGTCAAGCAAGGGTCA+TGG - tig0027239:50673-50692 Msa1433210:five_prime_UTR 50.0%
CCCCGTGAGCATAGCTAAGT+TGG + tig0027239:45325-45344 None:intergenic 55.0%
TGCTCACGGGGACGTCAATA+AGG - tig0027239:45334-45353 Msa1433210:intron 55.0%
GGATGCTGGTCCAACAGATG+TGG + tig0027239:45851-45870 None:intergenic 55.0%
GCCATGGCAATTGACCTCCT+TGG - tig0027239:46342-46361 Msa1433210:CDS 55.0%
TGACCTCCTTGGACCAAGTC+TGG - tig0027239:46353-46372 Msa1433210:CDS 55.0%
! CTTCCAGACTTGGTCCAAGG+AGG + tig0027239:46359-46378 None:intergenic 55.0%
GTTGAGTACATGCACTCCCG+TGG - tig0027239:46538-46557 Msa1433210:intron 55.0%
TCTCCCCTCCATTCAAGCCA+TGG - tig0027239:47179-47198 Msa1433210:intron 55.0%
CATATGCAGGCAGCAGGTGA+AGG + tig0027239:48727-48746 None:intergenic 55.0%
TTTCCCAGTCTCCCTTGGCA+AGG - tig0027239:49184-49203 Msa1433210:intron 55.0%
CAAACCTTGCCAAGGGAGAC+TGG + tig0027239:49191-49210 None:intergenic 55.0%
ACCGCAACGATCGGCAGTAA+TGG + tig0027239:49459-49478 None:intergenic 55.0%
! TTGGATCTAGTTCCAGGGCC+CGG - tig0027239:49667-49686 Msa1433210:intron 55.0%
GAGAGAGTAGAACGGCCTTC+AGG - tig0027239:49843-49862 Msa1433210:intron 55.0%
GGACGGCTGCTTGATAAGAC+AGG + tig0027239:50422-50441 None:intergenic 55.0%
AGCAGCCGTCCAAACTCTTC+TGG - tig0027239:50431-50450 Msa1433210:intron 55.0%
!! AATCGTGCTTCTGGGGCAAG+AGG - tig0027239:50560-50579 Msa1433210:CDS 55.0%
! GAACTCCTGTCACTTGGCAC+TGG - tig0027239:50611-50630 Msa1433210:five_prime_UTR 55.0%
CATACCGGGCAGTTCCAGTG+AGG + tig0027239:48897-48916 None:intergenic 60.0%
! TGGATCTAGTTCCAGGGCCC+GGG - tig0027239:49668-49687 Msa1433210:intron 60.0%
! TAAAGTACTCACCCGGGCCC+TGG + tig0027239:49682-49701 None:intergenic 60.0%
GGATCTGGCCATGGTGTGCA+TGG - tig0027239:50188-50207 Msa1433210:intron 60.0%
CCGTGACGAGAAGAGCTACG+CGG + tig0027239:50383-50402 None:intergenic 60.0%
CCGCGTAGCTCTTCTCGTCA+CGG - tig0027239:50380-50399 Msa1433210:CDS 60.0%
CGGCTAGAGCGGCTTTCACT+TGG + tig0027239:50461-50480 None:intergenic 60.0%
!! CGTGCTTCTGGGGCAAGAGG+TGG - tig0027239:50563-50582 Msa1433210:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0027239 gene 44222 51216 44222 ID=Msa1433210;Name=Msa1433210
tig0027239 mRNA 44222 51216 44222 ID=Msa1433210-mRNA-1;Parent=Msa1433210;Name=Msa1433210-mRNA-1;_AED=0.15;_eAED=0.15;_QI=632|1|1|1|1|1|14|570|464
tig0027239 exon 44222 45076 44222 ID=Msa1433210-mRNA-1:exon:8536;Parent=Msa1433210-mRNA-1
tig0027239 exon 45179 45309 45179 ID=Msa1433210-mRNA-1:exon:8535;Parent=Msa1433210-mRNA-1
tig0027239 exon 45574 45634 45574 ID=Msa1433210-mRNA-1:exon:8534;Parent=Msa1433210-mRNA-1
tig0027239 exon 45749 45822 45749 ID=Msa1433210-mRNA-1:exon:8533;Parent=Msa1433210-mRNA-1
tig0027239 exon 45897 46023 45897 ID=Msa1433210-mRNA-1:exon:8532;Parent=Msa1433210-mRNA-1
tig0027239 exon 46162 46246 46162 ID=Msa1433210-mRNA-1:exon:8531;Parent=Msa1433210-mRNA-1
tig0027239 exon 46325 46388 46325 ID=Msa1433210-mRNA-1:exon:8530;Parent=Msa1433210-mRNA-1
tig0027239 exon 46495 46556 46495 ID=Msa1433210-mRNA-1:exon:8529;Parent=Msa1433210-mRNA-1
tig0027239 exon 47115 47185 47115 ID=Msa1433210-mRNA-1:exon:8528;Parent=Msa1433210-mRNA-1
tig0027239 exon 48814 48909 48814 ID=Msa1433210-mRNA-1:exon:8527;Parent=Msa1433210-mRNA-1
tig0027239 exon 48995 49143 48995 ID=Msa1433210-mRNA-1:exon:8526;Parent=Msa1433210-mRNA-1
tig0027239 exon 49300 49369 49300 ID=Msa1433210-mRNA-1:exon:8525;Parent=Msa1433210-mRNA-1
tig0027239 exon 50361 50401 50361 ID=Msa1433210-mRNA-1:exon:8524;Parent=Msa1433210-mRNA-1
tig0027239 exon 50506 51216 50506 ID=Msa1433210-mRNA-1:exon:8523;Parent=Msa1433210-mRNA-1
tig0027239 five_prime_UTR 50585 51216 50585 ID=Msa1433210-mRNA-1:five_prime_utr;Parent=Msa1433210-mRNA-1
tig0027239 CDS 50506 50584 50506 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 CDS 50361 50401 50361 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 CDS 49300 49369 49300 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 CDS 48995 49143 48995 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 CDS 48814 48909 48814 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 CDS 47115 47185 47115 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 CDS 46495 46556 46495 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 CDS 46325 46388 46325 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 CDS 46162 46246 46162 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 CDS 45897 46023 45897 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 CDS 45749 45822 45749 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 CDS 45574 45634 45574 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 CDS 45179 45309 45179 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 CDS 44792 45076 44792 ID=Msa1433210-mRNA-1:cds;Parent=Msa1433210-mRNA-1
tig0027239 three_prime_UTR 44222 44791 44222 ID=Msa1433210-mRNA-1:three_prime_utr;Parent=Msa1433210-mRNA-1
Gene Sequence

>Msa1433210

ATGATGGATCATGTAATTGGTGGAAAATTCAAGCTCGGAAGGAAAATTGGTGGTGGGTCATTTGGAGAGCTCTACTTGGGTGTTAATGTACAAACTGGAGAGGAAGTTGCTCTTAAATTGGAACCTGTGAAGACCAAACATCCTCAACTTCACTACGAGTCAAAATTGTACATGCTTCTTCAAGGGGGAACGGGTATTCCCCATTTAAAATGGTTTGGAGTTGAGGGTGACTACAATGCCATGGCAATTGACCTCCTTGGACCAAGTCTGGAAGACTTGTTTAACTATTGCAATAGGAAATTCTCTCTAAAAACAGTTCTGATGCTTGCAGATCAGCTACTAAACAGAGTTGAGTACATGCACTCCCGTGGTTTCCTTCACCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTAGGACGCAAAGCAAATCAGGTATACATAATTGATTACGGCCTTGCAAAAAAGTTCCGAGATCTTCACACACACAAGCATATACCATACAGGGAAAACAAAAACCTCACTGGAACTGCCCGGTATGCAAGTGTTAATACTCATCTAGGAGTTGAACAAAGCAGAAGAGATGATCTGGAATCACTTGGTTTTGTACTCATGTACTTTTTGAGAGGAAGTCTCCCTTGGCAAGGTTTGAAAGCTGGCAATAAAAAACAAAAATACGACAGAATAAGTGAAAAGAAGATGCTTACTCCTATAGAGGTTTTGTGCAAGGCACATCCGTTGGAATTTACATCATACTTCCATTACTGCCGATCGTTGCGGTTTGAAGATAAGCCTGATTATTCGTATCTCAAGAGACTCTTTCGTGACCTATTCATCCGAGAAGGCTATCAGTTTGATTATGTGTTTGATTGGACTATATTGAAGTATCCACAAATTGGATCTAGTTCCAGGGCCCGGCCAAGTGGGAAACCAGTCATAAATCCAGGACAATCAGGAGAGAGAGTAGAACGGCCTTCAGGTGGACCAGAGATTCGGGATAGATTCTCGGGTGCAGTTCAGGCATTTGCAAGAAGGAATGGATCTGGCCATGGTGTGCATGGTGATCATTCCAGGCATAGATCTTCAGATGAGCCATCTTCTAAAGACGTGCAAGCTGATTCTGAGAGGCCGCGTAGCTCTTCTCGTCACGGCAGTTCTTCCAAAAGACCTGTCTTATCAAGCAGCCGTCCAAACTCTTCTGGTGAACCAAGTGAAAGCCGCTCTAGCCGATTGCTCTTGAGCAGTAGCAGACTATCTACTACTCAGAGGACTCAACCAGGTCTTGAGTCCAAATCATCATCATTTAATAATCGTGCTTCTGGGGCAAGAGGTGGTCGTGATGATACACTCAGGAGCTTTGAACTCCTGTCACTTGGCACTGGAAAAAGGAAATGA
Protein sequence

>Msa1433210

MMDHVIGGKFKLGRKIGGGSFGELYLGVNVQTGEEVALKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNAMAIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLLNRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKFRDLHTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGFVLMYFLRGSLPWQGLKAGNKKQKYDRISEKKMLTPIEVLCKAHPLEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRARPSGKPVINPGQSGERVERPSGGPEIRDRFSGAVQAFARRNGSGHGVHGDHSRHRSSDEPSSKDVQADSERPRSSSRHGSSSKRPVLSSSRPNSSGEPSESRSSRLLLSSSRLSTTQRTQPGLESKSSSFNNRASGARGGRDDTLRSFELLSLGTGKRK*