Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367420 | XP_003603927.1 | 80.388 | 464 | 63 | 9 | 1 | 463 | 1 | 437 | 0.0 | 677 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367420 | G7J729 | 80.388 | 464 | 63 | 9 | 1 | 463 | 1 | 437 | 0.0 | 677 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1367420 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0524220 | Msa1367420 | 0.880913 | 3.708755e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367420 | MtrunA17_Chr3g0144601 | 80.388 | 464 | 63 | 9 | 1 | 463 | 1 | 437 | 0.0 | 677 |
| Msa1367420 | MtrunA17_Chr3g0145531 | 80.388 | 464 | 63 | 9 | 1 | 463 | 1 | 437 | 0.0 | 669 |
| Msa1367420 | MtrunA17_Chr3g0082361 | 79.032 | 124 | 21 | 2 | 201 | 324 | 56 | 174 | 8.65e-59 | 191 |
| Msa1367420 | MtrunA17_Chr3g0107471 | 32.443 | 262 | 120 | 5 | 227 | 459 | 387 | 620 | 2.32e-30 | 124 |
| Msa1367420 | MtrunA17_Chr3g0107471 | 33.023 | 215 | 108 | 9 | 6 | 216 | 8 | 190 | 1.10e-16 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367420 | AT5G58340.2 | 25.984 | 381 | 247 | 13 | 96 | 457 | 81 | 445 | 2.87e-14 | 75.1 |
| Msa1367420 | AT5G58340.1 | 25.984 | 381 | 247 | 13 | 96 | 457 | 81 | 445 | 2.87e-14 | 75.1 |
| Msa1367420 | AT1G15720.1 | 28.455 | 369 | 194 | 16 | 96 | 457 | 81 | 386 | 2.27e-12 | 68.9 |
Find 131 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCATCATTGTTAACATTT+AGG | 0.186976 | tig0018513:-94754 | None:intergenic |
| AAAGAAATAACCAACCATTA+TGG | 0.218651 | tig0018513:-93982 | None:intergenic |
| CTGCTTGGAGGTAGTGTTTA+GGG | 0.228026 | tig0018513:-93700 | None:intergenic |
| CTCTTGAATGGCTTTCCTTC+TGG | 0.254243 | tig0018513:-93867 | None:intergenic |
| TCCAAGCAGTTGACAGAATA+TGG | 0.254939 | tig0018513:+93714 | Msa1367420:CDS |
| TAAGTGAATCCCCGTTCTTT+TGG | 0.273307 | tig0018513:-94568 | None:intergenic |
| TAACTCCAAAATTGAGATTC+TGG | 0.273343 | tig0018513:+93777 | Msa1367420:CDS |
| GTCTGGCATACAAATAGAAT+TGG | 0.288931 | tig0018513:-94636 | None:intergenic |
| TGAGTACGAGCAGAACTATT+TGG | 0.294065 | tig0018513:-94836 | None:intergenic |
| GCATCGCTAATAGGTGGATT+AGG | 0.298127 | tig0018513:-93596 | None:intergenic |
| AAAGACAATGGAAGGCTTAA+AGG | 0.299896 | tig0018513:+94458 | Msa1367420:CDS |
| AAGAGAAAGGAATTTGAAAA+TGG | 0.305804 | tig0018513:+93304 | Msa1367420:exon |
| ACTGCTTGGAGGTAGTGTTT+AGG | 0.310482 | tig0018513:-93701 | None:intergenic |
| TATAGAGAGTGAGCATATTA+AGG | 0.313329 | tig0018513:+93376 | Msa1367420:CDS |
| CCTTTAAAACAAAAGTTACT+TGG | 0.313965 | tig0018513:-96252 | None:intergenic |
| TGATTGTGAAGTAAAATTCT+AGG | 0.316653 | tig0018513:-96182 | None:intergenic |
| TCAGAATTGGAGAAGGAAAC+TGG | 0.354877 | tig0018513:+95832 | Msa1367420:intron |
| CTCTTCTCTTCTAACGCTGC+TGG | 0.355705 | tig0018513:-93281 | None:intergenic |
| AAGAAATAACCAACCATTAT+GGG | 0.366017 | tig0018513:-93981 | None:intergenic |
| CATCTTCCGATTATCGATTT+CGG | 0.378562 | tig0018513:-93426 | None:intergenic |
| GATGATGAACATCACTTTGA+TGG | 0.379549 | tig0018513:-94799 | None:intergenic |
| CATCGCTAATAGGTGGATTA+GGG | 0.381491 | tig0018513:-93595 | None:intergenic |
| CCATTCATCGATAGATGCTT+TGG | 0.387362 | tig0018513:-93489 | None:intergenic |
| GATTTCATGGCATCGCTAAT+AGG | 0.391784 | tig0018513:-93605 | None:intergenic |
| GTAGACATAAGCAGATTTCA+TGG | 0.396640 | tig0018513:-93618 | None:intergenic |
| GGAAAGGTTAGGGTGGTGTT+TGG | 0.397081 | tig0018513:+93325 | Msa1367420:CDS |
| TGTTGTTGTTGTTGAGGTAA+TGG | 0.400125 | tig0018513:+94496 | Msa1367420:CDS |
| TTTGTATGCCAGACATTGTA+AGG | 0.401380 | tig0018513:+94645 | Msa1367420:CDS |
| GAAGAAGCTTTCTCCGTTGA+AGG | 0.405658 | tig0018513:+95377 | Msa1367420:CDS |
| CACCTGCACCTGCTGCTTCA+AGG | 0.406135 | tig0018513:-93667 | None:intergenic |
| ATATATACAGCCCTTCTGTT+TGG | 0.407004 | tig0018513:-96073 | None:intergenic |
| GGAAGTTGCCTTCGTAAGAT+TGG | 0.411891 | tig0018513:-94777 | None:intergenic |
| TGGTGTTTGGAATTCGTTCT+TGG | 0.411975 | tig0018513:+93338 | Msa1367420:CDS |
| GCTCAAAATCAATCCCATAA+TGG | 0.413594 | tig0018513:+93968 | Msa1367420:CDS |
| TTAACGAGGCCCAAAAGAAC+GGG | 0.420375 | tig0018513:+94558 | Msa1367420:CDS |
| TCCATATTCTGTCAACTGCT+TGG | 0.421745 | tig0018513:-93715 | None:intergenic |
| GGTGGATTAGGGTTTGAAGA+AGG | 0.424767 | tig0018513:-93584 | None:intergenic |
| TTTAGGCAAGCATGTGGGTT+GGG | 0.424815 | tig0018513:-94737 | None:intergenic |
| GGGTTTGAAGGGTTTGAAGA+AGG | 0.425424 | tig0018513:-93563 | None:intergenic |
| AAAACTACTTCTAATTGATT+GGG | 0.433610 | tig0018513:+93538 | Msa1367420:CDS |
| GCATGTATCGTGAGTTGAAA+AGG | 0.433870 | tig0018513:-93820 | None:intergenic |
| GTGTCTGATATTGCGTTAGC+AGG | 0.434957 | tig0018513:+96222 | Msa1367420:three_prime_UTR |
| TGAATTTGGAAGGTATGTTC+AGG | 0.437724 | tig0018513:+96142 | Msa1367420:three_prime_UTR |
| GGGTTTGAAGAAGGGTTTGA+AGG | 0.441728 | tig0018513:-93575 | None:intergenic |
| GCAAATAACTTCTTCCCTCC+AGG | 0.443932 | tig0018513:-93754 | None:intergenic |
| GTGGATTAGGGTTTGAAGAA+GGG | 0.447021 | tig0018513:-93583 | None:intergenic |
| TGGACAACAACTCATCTTCA+AGG | 0.456297 | tig0018513:-93469 | None:intergenic |
| AATGGGAAGAGGATAATCTA+AGG | 0.459156 | tig0018513:+95451 | Msa1367420:CDS |
| GGAGAAAGCTTCTTCCTCTC+TGG | 0.461592 | tig0018513:-95369 | None:intergenic |
| CACAAATCAGGAGCCACAAA+TGG | 0.462731 | tig0018513:+94688 | Msa1367420:CDS |
| TACTACTGTTGTTGTTGTTG+AGG | 0.467147 | tig0018513:+94490 | Msa1367420:CDS |
| TGGAGAAATTTGAAGCGGTC+TGG | 0.467731 | tig0018513:+95990 | Msa1367420:CDS |
| ATTTGAAAATGGAAAGGTTA+GGG | 0.470688 | tig0018513:+93315 | Msa1367420:exon |
| TCTAACGCTGCTGGATCGAT+TGG | 0.470932 | tig0018513:-93272 | None:intergenic |
| ACATCAGACCTTACAATGTC+TGG | 0.471043 | tig0018513:-94653 | None:intergenic |
| GTACATTTGCATCTTTACTC+TGG | 0.471288 | tig0018513:-94715 | None:intergenic |
| TGATTCGATCGATGGATTGC+AGG | 0.471350 | tig0018513:+95305 | Msa1367420:CDS |
| AATTTGAAAATGGAAAGGTT+AGG | 0.473595 | tig0018513:+93314 | Msa1367420:exon |
| GAAGATGAAAATGCTTCTGT+TGG | 0.479184 | tig0018513:+93442 | Msa1367420:CDS |
| TACCTTGAAGCAGCAGGTGC+AGG | 0.480680 | tig0018513:+93665 | Msa1367420:CDS |
| GCAACAGAGTGAAGAAAGGA+AGG | 0.481758 | tig0018513:-93932 | None:intergenic |
| GGCAATTGAAGACACAAATC+AGG | 0.483604 | tig0018513:+94676 | Msa1367420:CDS |
| CAGTCACCGAAATCGATAAT+CGG | 0.485524 | tig0018513:+93420 | Msa1367420:CDS |
| GATGCTCGGAATAACCTTGT+AGG | 0.496320 | tig0018513:+93908 | Msa1367420:CDS |
| TCTGGCATACAAATAGAATT+GGG | 0.497185 | tig0018513:-94635 | None:intergenic |
| ATATTCTGTCAACTGCTTGG+AGG | 0.502799 | tig0018513:-93712 | None:intergenic |
| ATAAGTTAGATACATCTTGA+GGG | 0.506213 | tig0018513:-96293 | None:intergenic |
| CTATTTGGTTTCATCAAGCT+AGG | 0.506498 | tig0018513:-94821 | None:intergenic |
| AAGTACATACAGTTTAATTC+CGG | 0.506549 | tig0018513:-95475 | None:intergenic |
| GGTTTGAAGGGTTTGAAGAA+GGG | 0.508920 | tig0018513:-93562 | None:intergenic |
| ATGAAAATGCTTCTGTTGGA+AGG | 0.511456 | tig0018513:+93446 | Msa1367420:CDS |
| TAGAAGAGAAGAGAAGAGAA+AGG | 0.511915 | tig0018513:+93291 | Msa1367420:five_prime_UTR |
| CCAAAGCATCTATCGATGAA+TGG | 0.516478 | tig0018513:+93489 | Msa1367420:CDS |
| TGAAAAGGGAAGCATCGATT+CGG | 0.518415 | tig0018513:-93805 | None:intergenic |
| TTGTCTTTGTCGAGTTCCAT+CGG | 0.525502 | tig0018513:-94443 | None:intergenic |
| AGCAGCAACAGAGTGAAGAA+AGG | 0.532298 | tig0018513:-93936 | None:intergenic |
| AACGCAATATCAGACACTAC+TGG | 0.532623 | tig0018513:-96216 | None:intergenic |
| ATCAGTTCATGCCAAACAGA+AGG | 0.535655 | tig0018513:+96062 | Msa1367420:three_prime_UTR |
| CATGTATCGTGAGTTGAAAA+GGG | 0.536326 | tig0018513:-93819 | None:intergenic |
| TAGTGGGATGATTCGATCGA+TGG | 0.537188 | tig0018513:+95297 | Msa1367420:intron |
| GATTGCAGGCAGGAACATCA+AGG | 0.543132 | tig0018513:+95319 | Msa1367420:CDS |
| AATGGCTCGCTGCTTTATCA+AGG | 0.544070 | tig0018513:-96339 | None:intergenic |
| GATTGTGAAGTAAAATTCTA+GGG | 0.544638 | tig0018513:-96181 | None:intergenic |
| TTCACTTAAATGCAATTCTG+TGG | 0.545122 | tig0018513:+94583 | Msa1367420:CDS |
| TCGATCGATGGATTGCAGGC+AGG | 0.547141 | tig0018513:+95309 | Msa1367420:CDS |
| TTTGGTTCATACTCCTTCAA+CGG | 0.551515 | tig0018513:-95390 | None:intergenic |
| AATAAGTTAGATACATCTTG+AGG | 0.553492 | tig0018513:-96294 | None:intergenic |
| GGTTTGAAGAAGGGTTTGAA+GGG | 0.554124 | tig0018513:-93574 | None:intergenic |
| AAAATGGAGTCAATGGGAAG+AGG | 0.556320 | tig0018513:+95440 | Msa1367420:CDS |
| ATTTAGGCAAGCATGTGGGT+TGG | 0.556821 | tig0018513:-94738 | None:intergenic |
| AAAGGAATTTGAAAATGGAA+AGG | 0.559315 | tig0018513:+93309 | Msa1367420:exon |
| GAACCGTAGGTTTCAAAACC+TGG | 0.560313 | tig0018513:+93736 | Msa1367420:CDS |
| ATGATGAACATCACTTTGAT+GGG | 0.562151 | tig0018513:-94798 | None:intergenic |
| GAAGAGGATAATCTAAGGAC+CGG | 0.564580 | tig0018513:+95456 | Msa1367420:CDS |
| GTTAACGAGGCCCAAAAGAA+CGG | 0.567267 | tig0018513:+94557 | Msa1367420:CDS |
| GAAGAAAGGAAGGGCCTACA+AGG | 0.570430 | tig0018513:-93922 | None:intergenic |
| CTTCATTGTCTGATACCAGA+AGG | 0.585689 | tig0018513:+93852 | Msa1367420:CDS |
| AACTCGACAAAGACAATGGA+AGG | 0.587275 | tig0018513:+94450 | Msa1367420:CDS |
| CAATGGAAGGCTTAAAGGCA+AGG | 0.588132 | tig0018513:+94463 | Msa1367420:CDS |
| TTGCTGTGGAATGTACCGTT+AGG | 0.589094 | tig0018513:+93642 | Msa1367420:CDS |
| TTCATGGCATCGCTAATAGG+TGG | 0.591268 | tig0018513:-93602 | None:intergenic |
| AGGTTGATTTGAAAGACAAG+TGG | 0.593616 | tig0018513:+95970 | Msa1367420:intron |
| TTGACAGAATATGGAACCGT+AGG | 0.599653 | tig0018513:+93723 | Msa1367420:CDS |
| TGACTCTTTGCCAGTTAACG+AGG | 0.601690 | tig0018513:+94544 | Msa1367420:CDS |
| TGCTTATGTCTACATTGCTG+TGG | 0.602167 | tig0018513:+93628 | Msa1367420:CDS |
| TTAACATTTAGGCAAGCATG+TGG | 0.604145 | tig0018513:-94743 | None:intergenic |
| CTTGAAGCAGCAGGTGCAGG+TGG | 0.604795 | tig0018513:+93668 | Msa1367420:CDS |
| TCTCATATTAGAGTCTCCGA+TGG | 0.606409 | tig0018513:+94427 | Msa1367420:intron |
| ATTGCAGGCAGGAACATCAA+GGG | 0.616311 | tig0018513:+95320 | Msa1367420:CDS |
| GTTAGGTACCTTGAAGCAGC+AGG | 0.617125 | tig0018513:+93659 | Msa1367420:CDS |
| ATTATCGATTTCGGTGACTG+AGG | 0.617150 | tig0018513:-93417 | None:intergenic |
| ATGGAACTCGACAAAGACAA+TGG | 0.617169 | tig0018513:+94446 | Msa1367420:CDS |
| TCAGTTCATGCCAAACAGAA+GGG | 0.621916 | tig0018513:+96063 | Msa1367420:three_prime_UTR |
| TGTCTGATATTGCGTTAGCA+GGG | 0.622995 | tig0018513:+96223 | Msa1367420:three_prime_UTR |
| TGAAAATGGAAAGGTTAGGG+TGG | 0.628807 | tig0018513:+93318 | Msa1367420:exon |
| CCTAAATGTTAACAATGATG+AGG | 0.630277 | tig0018513:+94754 | Msa1367420:CDS |
| TGCTGCTTCAAGGTACCTAA+CGG | 0.634086 | tig0018513:-93657 | None:intergenic |
| ATACAAATAGAATTGGGCAC+AGG | 0.635848 | tig0018513:-94629 | None:intergenic |
| ATGGATGCTTGAACTTCTCG+AGG | 0.640307 | tig0018513:+93508 | Msa1367420:CDS |
| TTGCAGGCAGGAACATCAAG+GGG | 0.642905 | tig0018513:+95321 | Msa1367420:CDS |
| TTCGTTTGCGTAGTCCAGAG+AGG | 0.651598 | tig0018513:+95355 | Msa1367420:CDS |
| CAACAGAGTGAAGAAAGGAA+GGG | 0.656227 | tig0018513:-93931 | None:intergenic |
| CGTAGGTTTCAAAACCTGGA+GGG | 0.661614 | tig0018513:+93740 | Msa1367420:CDS |
| CAGAAGGAAAGCCATTCAAG+AGG | 0.668057 | tig0018513:+93868 | Msa1367420:CDS |
| TAACATTTAGGCAAGCATGT+GGG | 0.675244 | tig0018513:-94742 | None:intergenic |
| ACAAGTGGAGAAATTTGAAG+CGG | 0.678726 | tig0018513:+95985 | Msa1367420:CDS |
| AGACATTGTAAGGTCTGATG+TGG | 0.687030 | tig0018513:+94655 | Msa1367420:CDS |
| CCGTAGGTTTCAAAACCTGG+AGG | 0.690526 | tig0018513:+93739 | Msa1367420:CDS |
| TAGTTCTGCTCGTACTCACG+AGG | 0.692042 | tig0018513:+94841 | Msa1367420:CDS |
| TGATGAGGCCAATCTTACGA+AGG | 0.699645 | tig0018513:+94769 | Msa1367420:CDS |
| TAACGAGGCCCAAAAGAACG+GGG | 0.712659 | tig0018513:+94559 | Msa1367420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTTGAATAGTAAAA+TGG | - | tig0018513:95709-95728 | None:intergenic | 10.0% |
| !!! | TTTGTAATTTTTTGTATTTC+TGG | + | tig0018513:94873-94892 | Msa1367420:intron | 15.0% |
| !! | TAAAATAAGCAATAAAATCA+AGG | - | tig0018513:95275-95294 | None:intergenic | 15.0% |
| !! | AAATATTATAGTAACTTGAT+TGG | - | tig0018513:95508-95527 | None:intergenic | 15.0% |
| !! | ATCAGTAAAAAAAAAAAAGA+AGG | - | tig0018513:96044-96063 | None:intergenic | 15.0% |
| !!! | ATAGTATTACTTTTTGAATT+TGG | + | tig0018513:96128-96147 | Msa1367420:three_prime_UTR | 15.0% |
| !! | AAAAACTACTTCTAATTGAT+TGG | + | tig0018513:93537-93556 | Msa1367420:CDS | 20.0% |
| !! | AAAACTACTTCTAATTGATT+GGG | + | tig0018513:93538-93557 | Msa1367420:CDS | 20.0% |
| !!! | TTTTTAGAGTAAAAAGGAAT+GGG | - | tig0018513:95187-95206 | None:intergenic | 20.0% |
| !!! | TTATTGCTTATTTTATGTAG+TGG | + | tig0018513:95280-95299 | Msa1367420:intron | 20.0% |
| !!! | TATTGCTTATTTTATGTAGT+GGG | + | tig0018513:95281-95300 | Msa1367420:intron | 20.0% |
| !! | AACCAAAAAATATTACGAAA+AGG | + | tig0018513:95406-95425 | Msa1367420:CDS | 20.0% |
| !! | AAAGGAGAAAGAAAAAAAAA+TGG | + | tig0018513:95424-95443 | Msa1367420:CDS | 20.0% |
| !!! | ATACAATGTTTTTTCGTTTT+TGG | + | tig0018513:95545-95564 | Msa1367420:intron | 20.0% |
| !! | AAAAATGTATGACAAAGTAA+AGG | - | tig0018513:95598-95617 | None:intergenic | 20.0% |
| !! | AATTGAAGCATAAATAGTTA+GGG | - | tig0018513:95734-95753 | None:intergenic | 20.0% |
| !!! | CTTTTTTCTTTTTTCAGAAT+TGG | + | tig0018513:95819-95838 | Msa1367420:intron | 20.0% |
| !!! | TGAATCAAATTTTGTTTATC+AGG | + | tig0018513:95950-95969 | Msa1367420:intron | 20.0% |
| !!! | TACATGCATAAATTTTTCAT+TGG | - | tig0018513:96019-96038 | None:intergenic | 20.0% |
| !!! | TATTACTTTTTGAATTTGGA+AGG | + | tig0018513:96132-96151 | Msa1367420:three_prime_UTR | 20.0% |
| !!! | AGATGTATCTAACTTATTTT+AGG | + | tig0018513:96299-96318 | Msa1367420:three_prime_UTR | 20.0% |
| ! | AAGAGAAAGGAATTTGAAAA+TGG | + | tig0018513:93304-93323 | Msa1367420:exon | 25.0% |
| ! | AAAGGAATTTGAAAATGGAA+AGG | + | tig0018513:93309-93328 | Msa1367420:exon | 25.0% |
| ! | AATTTGAAAATGGAAAGGTT+AGG | + | tig0018513:93314-93333 | Msa1367420:exon | 25.0% |
| ! | ATTTGAAAATGGAAAGGTTA+GGG | + | tig0018513:93315-93334 | Msa1367420:exon | 25.0% |
| ! | AAGAAATAACCAACCATTAT+GGG | - | tig0018513:93984-94003 | None:intergenic | 25.0% |
| ! | AAAGAAATAACCAACCATTA+TGG | - | tig0018513:93985-94004 | None:intergenic | 25.0% |
| ! | AACAACAACAACAGAAAAAA+GGG | - | tig0018513:94010-94029 | None:intergenic | 25.0% |
| ! | AAACAACAACAACAGAAAAA+AGG | - | tig0018513:94011-94030 | None:intergenic | 25.0% |
| !!! | TCTGTTGTTGTTGTTTATTA+CGG | + | tig0018513:94015-94034 | Msa1367420:intron | 25.0% |
| ! | AATTTCATTGCAAAATGCAT+AGG | + | tig0018513:94259-94278 | Msa1367420:intron | 25.0% |
| ! | ATTTCATTGCAAAATGCATA+GGG | + | tig0018513:94260-94279 | Msa1367420:intron | 25.0% |
| !! | AACAGGTATTTTTCATAACT+CGG | - | tig0018513:94368-94387 | None:intergenic | 25.0% |
| !!! | AAAAGTTCTAAAAAGCAAAC+AGG | - | tig0018513:94385-94404 | None:intergenic | 25.0% |
| ! | TTGCAATTTATCTGCATTTA+GGG | - | tig0018513:94963-94982 | None:intergenic | 25.0% |
| ! | TTTGCAATTTATCTGCATTT+AGG | - | tig0018513:94964-94983 | None:intergenic | 25.0% |
| !!! | GTTTTTAGAGTAAAAAGGAA+TGG | - | tig0018513:95188-95207 | None:intergenic | 25.0% |
| !!! | CTAGTGTTTTTAGAGTAAAA+AGG | - | tig0018513:95193-95212 | None:intergenic | 25.0% |
| ! | AGAACAAAAAATTACAAGCA+TGG | - | tig0018513:95245-95264 | None:intergenic | 25.0% |
| !! | CTCCTTTTCGTAATATTTTT+TGG | - | tig0018513:95411-95430 | None:intergenic | 25.0% |
| ! | AGAAAAAAAAATGGAGTCAA+TGG | + | tig0018513:95433-95452 | Msa1367420:CDS | 25.0% |
| ! | GAAAAAAAAATGGAGTCAAT+GGG | + | tig0018513:95434-95453 | Msa1367420:CDS | 25.0% |
| ! | AAGTACATACAGTTTAATTC+CGG | - | tig0018513:95478-95497 | None:intergenic | 25.0% |
| ! | AAAGTAAAGGTAAAAGCAAA+AGG | - | tig0018513:95585-95604 | None:intergenic | 25.0% |
| ! | CAATTGAAGCATAAATAGTT+AGG | - | tig0018513:95735-95754 | None:intergenic | 25.0% |
| ! | GATTGTGAAGTAAAATTCTA+GGG | - | tig0018513:96184-96203 | None:intergenic | 25.0% |
| ! | TGATTGTGAAGTAAAATTCT+AGG | - | tig0018513:96185-96204 | None:intergenic | 25.0% |
| !! | TTTTACTTCACAATCATGAA+AGG | + | tig0018513:96189-96208 | Msa1367420:three_prime_UTR | 25.0% |
| !!! | CCTTTAAAACAAAAGTTACT+TGG | - | tig0018513:96255-96274 | None:intergenic | 25.0% |
| !!! | CCAAGTAACTTTTGTTTTAA+AGG | + | tig0018513:96252-96271 | Msa1367420:three_prime_UTR | 25.0% |
| ! | ATAAGTTAGATACATCTTGA+GGG | - | tig0018513:96296-96315 | None:intergenic | 25.0% |
| ! | AATAAGTTAGATACATCTTG+AGG | - | tig0018513:96297-96316 | None:intergenic | 25.0% |
| TATAGAGAGTGAGCATATTA+AGG | + | tig0018513:93376-93395 | Msa1367420:CDS | 30.0% | |
| TAACTCCAAAATTGAGATTC+TGG | + | tig0018513:93777-93796 | Msa1367420:CDS | 30.0% | |
| ! | CTTTTCCAGAATCTCAATTT+TGG | - | tig0018513:93785-93804 | None:intergenic | 30.0% |
| AAAAAGTTGAACCTCTTGAA+TGG | - | tig0018513:93882-93901 | None:intergenic | 30.0% | |
| !!! | TCAAGAGGTTCAACTTTTTT+TGG | + | tig0018513:93883-93902 | Msa1367420:CDS | 30.0% |
| AAAATCAATCCCATAATGGT+TGG | + | tig0018513:93972-93991 | Msa1367420:intron | 30.0% | |
| ACAACAACAACAGAAAAAAG+GGG | - | tig0018513:94009-94028 | None:intergenic | 30.0% | |
| TTCACTTAAATGCAATTCTG+TGG | + | tig0018513:94583-94602 | Msa1367420:CDS | 30.0% | |
| TCTGGCATACAAATAGAATT+GGG | - | tig0018513:94638-94657 | None:intergenic | 30.0% | |
| CCTCATCATTGTTAACATTT+AGG | - | tig0018513:94757-94776 | None:intergenic | 30.0% | |
| CCTAAATGTTAACAATGATG+AGG | + | tig0018513:94754-94773 | Msa1367420:CDS | 30.0% | |
| ATGATGAACATCACTTTGAT+GGG | - | tig0018513:94801-94820 | None:intergenic | 30.0% | |
| !!! | ATTTCTGGTTGATTCCTTTT+TGG | + | tig0018513:94888-94907 | Msa1367420:intron | 30.0% |
| !!! | TTTCTGGTTGATTCCTTTTT+GGG | + | tig0018513:94889-94908 | Msa1367420:intron | 30.0% |
| ACTAACAAAGTCTACATTCA+GGG | - | tig0018513:94992-95011 | None:intergenic | 30.0% | |
| TCAGGGACTAAATTAACTAA+CGG | - | tig0018513:95039-95058 | None:intergenic | 30.0% | |
| TTTGCATATTATCTGCATTC+AGG | + | tig0018513:95112-95131 | Msa1367420:intron | 30.0% | |
| TTGCATATTATCTGCATTCA+GGG | + | tig0018513:95113-95132 | Msa1367420:intron | 30.0% | |
| AAGCAATAAAATCAAGGCAT+CGG | - | tig0018513:95269-95288 | None:intergenic | 30.0% | |
| !!! | TCTTTTTTCAGAATTGGAGA+AGG | + | tig0018513:95825-95844 | Msa1367420:intron | 30.0% |
| AACTGAAGTAAGTCTAGTAA+AGG | + | tig0018513:95890-95909 | Msa1367420:intron | 30.0% | |
| ! | AGTAAGTCTAGTAAAGGTAT+TGG | + | tig0018513:95896-95915 | Msa1367420:intron | 30.0% |
| TAGAAGAGAAGAGAAGAGAA+AGG | + | tig0018513:93291-93310 | Msa1367420:five_prime_UTR | 35.0% | |
| !! | CATCTTCCGATTATCGATTT+CGG | - | tig0018513:93429-93448 | None:intergenic | 35.0% |
| GAAGATGAAAATGCTTCTGT+TGG | + | tig0018513:93442-93461 | Msa1367420:CDS | 35.0% | |
| ATGAAAATGCTTCTGTTGGA+AGG | + | tig0018513:93446-93465 | Msa1367420:CDS | 35.0% | |
| GTAGACATAAGCAGATTTCA+TGG | - | tig0018513:93621-93640 | None:intergenic | 35.0% | |
| ! | CATGTATCGTGAGTTGAAAA+GGG | - | tig0018513:93822-93841 | None:intergenic | 35.0% |
| !!! | AGAGGTTCAACTTTTTTTGG+AGG | + | tig0018513:93886-93905 | Msa1367420:CDS | 35.0% |
| !!! | AACTTTTTTTGGAGGATGCT+CGG | + | tig0018513:93894-93913 | Msa1367420:CDS | 35.0% |
| GCTCAAAATCAATCCCATAA+TGG | + | tig0018513:93968-93987 | Msa1367420:CDS | 35.0% | |
| ATGAAGCACAAGCACATATA+CGG | - | tig0018513:94158-94177 | None:intergenic | 35.0% | |
| TATATGTGCTTGTGCTTCAT+AGG | + | tig0018513:94158-94177 | Msa1367420:intron | 35.0% | |
| ! | AGTGAGAGCCTTATATACTT+TGG | + | tig0018513:94229-94248 | Msa1367420:intron | 35.0% |
| ! | GTGAGAGCCTTATATACTTT+GGG | + | tig0018513:94230-94249 | Msa1367420:intron | 35.0% |
| TCTCTCTCCCAAAGTATATA+AGG | - | tig0018513:94240-94259 | None:intergenic | 35.0% | |
| CCTAACCAATGAATGATTCA+TGG | - | tig0018513:94289-94308 | None:intergenic | 35.0% | |
| ! | CCATGAATCATTCATTGGTT+AGG | + | tig0018513:94286-94305 | Msa1367420:intron | 35.0% |
| AAAGACAATGGAAGGCTTAA+AGG | + | tig0018513:94458-94477 | Msa1367420:CDS | 35.0% | |
| ! | TACTACTGTTGTTGTTGTTG+AGG | + | tig0018513:94490-94509 | Msa1367420:CDS | 35.0% |
| ! | TGTTGTTGTTGTTGAGGTAA+TGG | + | tig0018513:94496-94515 | Msa1367420:CDS | 35.0% |
| ATACAAATAGAATTGGGCAC+AGG | - | tig0018513:94632-94651 | None:intergenic | 35.0% | |
| GTCTGGCATACAAATAGAAT+TGG | - | tig0018513:94639-94658 | None:intergenic | 35.0% | |
| TTTGTATGCCAGACATTGTA+AGG | + | tig0018513:94645-94664 | Msa1367420:CDS | 35.0% | |
| !!! | TTACTCTGGTTTTCCATTTG+TGG | - | tig0018513:94704-94723 | None:intergenic | 35.0% |
| GTACATTTGCATCTTTACTC+TGG | - | tig0018513:94718-94737 | None:intergenic | 35.0% | |
| TAACATTTAGGCAAGCATGT+GGG | - | tig0018513:94745-94764 | None:intergenic | 35.0% | |
| TTAACATTTAGGCAAGCATG+TGG | - | tig0018513:94746-94765 | None:intergenic | 35.0% | |
| GATGATGAACATCACTTTGA+TGG | - | tig0018513:94802-94821 | None:intergenic | 35.0% | |
| ! | CTATTTGGTTTCATCAAGCT+AGG | - | tig0018513:94824-94843 | None:intergenic | 35.0% |
| !! | TTCTGGTTGATTCCTTTTTG+GGG | + | tig0018513:94890-94909 | Msa1367420:intron | 35.0% |
| AAGTGACTAATTCCCCAAAA+AGG | - | tig0018513:94905-94924 | None:intergenic | 35.0% | |
| GACTAACAAAGTCTACATTC+AGG | - | tig0018513:94993-95012 | None:intergenic | 35.0% | |
| ACTAACGAAGTCTACATTCA+GGG | - | tig0018513:95056-95075 | None:intergenic | 35.0% | |
| ! | TTTGGTTCATACTCCTTCAA+CGG | - | tig0018513:95393-95412 | None:intergenic | 35.0% |
| AATGGGAAGAGGATAATCTA+AGG | + | tig0018513:95451-95470 | Msa1367420:CDS | 35.0% | |
| !! | AGGTTGATTTGAAAGACAAG+TGG | + | tig0018513:95970-95989 | Msa1367420:intron | 35.0% |
| ACAAGTGGAGAAATTTGAAG+CGG | + | tig0018513:95985-96004 | Msa1367420:CDS | 35.0% | |
| ATATATACAGCCCTTCTGTT+TGG | - | tig0018513:96076-96095 | None:intergenic | 35.0% | |
| ! | TGAATTTGGAAGGTATGTTC+AGG | + | tig0018513:96142-96161 | Msa1367420:three_prime_UTR | 35.0% |
| TGAAAATGGAAAGGTTAGGG+TGG | + | tig0018513:93318-93337 | Msa1367420:exon | 40.0% | |
| ! | TGGTGTTTGGAATTCGTTCT+TGG | + | tig0018513:93338-93357 | Msa1367420:CDS | 40.0% |
| !! | ATTATCGATTTCGGTGACTG+AGG | - | tig0018513:93420-93439 | None:intergenic | 40.0% |
| CAGTCACCGAAATCGATAAT+CGG | + | tig0018513:93420-93439 | Msa1367420:CDS | 40.0% | |
| TGGACAACAACTCATCTTCA+AGG | - | tig0018513:93472-93491 | None:intergenic | 40.0% | |
| CCATTCATCGATAGATGCTT+TGG | - | tig0018513:93492-93511 | None:intergenic | 40.0% | |
| ! | CCAAAGCATCTATCGATGAA+TGG | + | tig0018513:93489-93508 | Msa1367420:CDS | 40.0% |
| GGTTTGAAGGGTTTGAAGAA+GGG | - | tig0018513:93565-93584 | None:intergenic | 40.0% | |
| GGTTTGAAGAAGGGTTTGAA+GGG | - | tig0018513:93577-93596 | None:intergenic | 40.0% | |
| !! | GTGGATTAGGGTTTGAAGAA+GGG | - | tig0018513:93586-93605 | None:intergenic | 40.0% |
| !! | CATCGCTAATAGGTGGATTA+GGG | - | tig0018513:93598-93617 | None:intergenic | 40.0% |
| GATTTCATGGCATCGCTAAT+AGG | - | tig0018513:93608-93627 | None:intergenic | 40.0% | |
| TGCTTATGTCTACATTGCTG+TGG | + | tig0018513:93628-93647 | Msa1367420:CDS | 40.0% | |
| ATATTCTGTCAACTGCTTGG+AGG | - | tig0018513:93715-93734 | None:intergenic | 40.0% | |
| TCCAAGCAGTTGACAGAATA+TGG | + | tig0018513:93714-93733 | Msa1367420:CDS | 40.0% | |
| TCCATATTCTGTCAACTGCT+TGG | - | tig0018513:93718-93737 | None:intergenic | 40.0% | |
| TTGACAGAATATGGAACCGT+AGG | + | tig0018513:93723-93742 | Msa1367420:CDS | 40.0% | |
| !! | TGAAAAGGGAAGCATCGATT+CGG | - | tig0018513:93808-93827 | None:intergenic | 40.0% |
| ! | GCATGTATCGTGAGTTGAAA+AGG | - | tig0018513:93823-93842 | None:intergenic | 40.0% |
| CTTCATTGTCTGATACCAGA+AGG | + | tig0018513:93852-93871 | Msa1367420:CDS | 40.0% | |
| CAACAGAGTGAAGAAAGGAA+GGG | - | tig0018513:93934-93953 | None:intergenic | 40.0% | |
| !! | GATTGATTTTGAGCAGCAGA+AGG | - | tig0018513:93962-93981 | None:intergenic | 40.0% |
| GTGTCAAGTCAACATTGTGT+CGG | - | tig0018513:94094-94113 | None:intergenic | 40.0% | |
| GGTCTCCATGAATCATTCAT+TGG | + | tig0018513:94281-94300 | Msa1367420:intron | 40.0% | |
| ! | ATAACTCGGAAAGCGTGAAT+GGG | - | tig0018513:94354-94373 | None:intergenic | 40.0% |
| TCTCATATTAGAGTCTCCGA+TGG | + | tig0018513:94427-94446 | Msa1367420:intron | 40.0% | |
| TTGTCTTTGTCGAGTTCCAT+CGG | - | tig0018513:94446-94465 | None:intergenic | 40.0% | |
| ATGGAACTCGACAAAGACAA+TGG | + | tig0018513:94446-94465 | Msa1367420:CDS | 40.0% | |
| AACTCGACAAAGACAATGGA+AGG | + | tig0018513:94450-94469 | Msa1367420:CDS | 40.0% | |
| ! | AGAGTCAATTTTGCTACAGC+TGG | - | tig0018513:94531-94550 | None:intergenic | 40.0% |
| ! | AAGTGAATCCCCGTTCTTTT+GGG | - | tig0018513:94570-94589 | None:intergenic | 40.0% |
| ! | TAAGTGAATCCCCGTTCTTT+TGG | - | tig0018513:94571-94590 | None:intergenic | 40.0% |
| ACATCAGACCTTACAATGTC+TGG | - | tig0018513:94656-94675 | None:intergenic | 40.0% | |
| AGACATTGTAAGGTCTGATG+TGG | + | tig0018513:94655-94674 | Msa1367420:CDS | 40.0% | |
| GGCAATTGAAGACACAAATC+AGG | + | tig0018513:94676-94695 | Msa1367420:CDS | 40.0% | |
| TGAGTACGAGCAGAACTATT+TGG | - | tig0018513:94839-94858 | None:intergenic | 40.0% | |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | + | tig0018513:94916-94935 | Msa1367420:intron | 40.0% |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | + | tig0018513:94917-94936 | Msa1367420:intron | 40.0% |
| GACTAACGAAGTCTACATTC+AGG | - | tig0018513:95057-95076 | None:intergenic | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | - | tig0018513:94917-94936 | None:intergenic | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | - | tig0018513:94916-94935 | None:intergenic | 40.0% |
| AAAATGGAGTCAATGGGAAG+AGG | + | tig0018513:95440-95459 | Msa1367420:CDS | 40.0% | |
| GAAGAGGATAATCTAAGGAC+CGG | + | tig0018513:95456-95475 | Msa1367420:CDS | 40.0% | |
| GGTAAAAGCAAAAGGAGATG+AGG | - | tig0018513:95577-95596 | None:intergenic | 40.0% | |
| TCAGAATTGGAGAAGGAAAC+TGG | + | tig0018513:95832-95851 | Msa1367420:intron | 40.0% | |
| ATCAGTTCATGCCAAACAGA+AGG | + | tig0018513:96062-96081 | Msa1367420:three_prime_UTR | 40.0% | |
| TCAGTTCATGCCAAACAGAA+GGG | + | tig0018513:96063-96082 | Msa1367420:three_prime_UTR | 40.0% | |
| AACGCAATATCAGACACTAC+TGG | - | tig0018513:96219-96238 | None:intergenic | 40.0% | |
| TGTCTGATATTGCGTTAGCA+GGG | + | tig0018513:96223-96242 | Msa1367420:three_prime_UTR | 40.0% | |
| ATGGATGCTTGAACTTCTCG+AGG | + | tig0018513:93508-93527 | Msa1367420:CDS | 45.0% | |
| GGGTTTGAAGGGTTTGAAGA+AGG | - | tig0018513:93566-93585 | None:intergenic | 45.0% | |
| GGGTTTGAAGAAGGGTTTGA+AGG | - | tig0018513:93578-93597 | None:intergenic | 45.0% | |
| !! | GGTGGATTAGGGTTTGAAGA+AGG | - | tig0018513:93587-93606 | None:intergenic | 45.0% |
| ! | GCATCGCTAATAGGTGGATT+AGG | - | tig0018513:93599-93618 | None:intergenic | 45.0% |
| TTCATGGCATCGCTAATAGG+TGG | - | tig0018513:93605-93624 | None:intergenic | 45.0% | |
| TTGCTGTGGAATGTACCGTT+AGG | + | tig0018513:93642-93661 | Msa1367420:CDS | 45.0% | |
| ! | TGCTGCTTCAAGGTACCTAA+CGG | - | tig0018513:93660-93679 | None:intergenic | 45.0% |
| CTGCTTGGAGGTAGTGTTTA+GGG | - | tig0018513:93703-93722 | None:intergenic | 45.0% | |
| ACTGCTTGGAGGTAGTGTTT+AGG | - | tig0018513:93704-93723 | None:intergenic | 45.0% | |
| GAACCGTAGGTTTCAAAACC+TGG | + | tig0018513:93736-93755 | Msa1367420:CDS | 45.0% | |
| !!! | CCTCCAGGTTTTGAAACCTA+CGG | - | tig0018513:93742-93761 | None:intergenic | 45.0% |
| CGTAGGTTTCAAAACCTGGA+GGG | + | tig0018513:93740-93759 | Msa1367420:CDS | 45.0% | |
| GCAAATAACTTCTTCCCTCC+AGG | - | tig0018513:93757-93776 | None:intergenic | 45.0% | |
| CTCTTGAATGGCTTTCCTTC+TGG | - | tig0018513:93870-93889 | None:intergenic | 45.0% | |
| CAGAAGGAAAGCCATTCAAG+AGG | + | tig0018513:93868-93887 | Msa1367420:CDS | 45.0% | |
| GATGCTCGGAATAACCTTGT+AGG | + | tig0018513:93908-93927 | Msa1367420:CDS | 45.0% | |
| GCAACAGAGTGAAGAAAGGA+AGG | - | tig0018513:93935-93954 | None:intergenic | 45.0% | |
| AGCAGCAACAGAGTGAAGAA+AGG | - | tig0018513:93939-93958 | None:intergenic | 45.0% | |
| AAAGCGTGAATGGGGATTCA+GGG | - | tig0018513:94345-94364 | None:intergenic | 45.0% | |
| ! | TAACTCGGAAAGCGTGAATG+GGG | - | tig0018513:94353-94372 | None:intergenic | 45.0% |
| ! | CATAACTCGGAAAGCGTGAA+TGG | - | tig0018513:94355-94374 | None:intergenic | 45.0% |
| CAATGGAAGGCTTAAAGGCA+AGG | + | tig0018513:94463-94482 | Msa1367420:CDS | 45.0% | |
| TGACTCTTTGCCAGTTAACG+AGG | + | tig0018513:94544-94563 | Msa1367420:CDS | 45.0% | |
| ! | TTCTTTTGGGCCTCGTTAAC+TGG | - | tig0018513:94557-94576 | None:intergenic | 45.0% |
| GTTAACGAGGCCCAAAAGAA+CGG | + | tig0018513:94557-94576 | Msa1367420:CDS | 45.0% | |
| TTAACGAGGCCCAAAAGAAC+GGG | + | tig0018513:94558-94577 | Msa1367420:CDS | 45.0% | |
| CACAAATCAGGAGCCACAAA+TGG | + | tig0018513:94688-94707 | Msa1367420:CDS | 45.0% | |
| TTTAGGCAAGCATGTGGGTT+GGG | - | tig0018513:94740-94759 | None:intergenic | 45.0% | |
| ATTTAGGCAAGCATGTGGGT+TGG | - | tig0018513:94741-94760 | None:intergenic | 45.0% | |
| TGATGAGGCCAATCTTACGA+AGG | + | tig0018513:94769-94788 | Msa1367420:CDS | 45.0% | |
| GGAAGTTGCCTTCGTAAGAT+TGG | - | tig0018513:94780-94799 | None:intergenic | 45.0% | |
| GACGAATCGTTTCCCATTCA+GGG | - | tig0018513:94932-94951 | None:intergenic | 45.0% | |
| TGACGAATCGTTTCCCATTC+AGG | - | tig0018513:94933-94952 | None:intergenic | 45.0% | |
| ACTAACGGAGTCTGCATTCA+GGG | - | tig0018513:95024-95043 | None:intergenic | 45.0% | |
| AACTAACGGAGTCTGCATTC+AGG | - | tig0018513:95025-95044 | None:intergenic | 45.0% | |
| TCCCTGAAATTGACCATGCA+GGG | + | tig0018513:95084-95103 | Msa1367420:intron | 45.0% | |
| TCCCTGCATGGTCAATTTCA+GGG | - | tig0018513:95088-95107 | None:intergenic | 45.0% | |
| TATGCAAAACAGTCCCTGCA+TGG | - | tig0018513:95100-95119 | None:intergenic | 45.0% | |
| ! | GTCACTTTAGTCCCTGAATG+GGG | - | tig0018513:94918-94937 | None:intergenic | 45.0% |
| TAGTGGGATGATTCGATCGA+TGG | + | tig0018513:95297-95316 | Msa1367420:intron | 45.0% | |
| !! | TGATTCGATCGATGGATTGC+AGG | + | tig0018513:95305-95324 | Msa1367420:CDS | 45.0% |
| ATTGCAGGCAGGAACATCAA+GGG | + | tig0018513:95320-95339 | Msa1367420:CDS | 45.0% | |
| GAAGAAGCTTTCTCCGTTGA+AGG | + | tig0018513:95377-95396 | Msa1367420:CDS | 45.0% | |
| ! | TGGAGAAATTTGAAGCGGTC+TGG | + | tig0018513:95990-96009 | Msa1367420:CDS | 45.0% |
| GTGTCTGATATTGCGTTAGC+AGG | + | tig0018513:96222-96241 | Msa1367420:three_prime_UTR | 45.0% | |
| TCTAACGCTGCTGGATCGAT+TGG | - | tig0018513:93275-93294 | None:intergenic | 50.0% | |
| CTCTTCTCTTCTAACGCTGC+TGG | - | tig0018513:93284-93303 | None:intergenic | 50.0% | |
| GGAAAGGTTAGGGTGGTGTT+TGG | + | tig0018513:93325-93344 | Msa1367420:CDS | 50.0% | |
| GTTAGGTACCTTGAAGCAGC+AGG | + | tig0018513:93659-93678 | Msa1367420:CDS | 50.0% | |
| CCGTAGGTTTCAAAACCTGG+AGG | + | tig0018513:93739-93758 | Msa1367420:CDS | 50.0% | |
| GAAGAAAGGAAGGGCCTACA+AGG | - | tig0018513:93925-93944 | None:intergenic | 50.0% | |
| !! | CATTGTGTCGGTGTCAGACA+TGG | - | tig0018513:94082-94101 | None:intergenic | 50.0% |
| ! | GAAAGCGTGAATGGGGATTC+AGG | - | tig0018513:94346-94365 | None:intergenic | 50.0% |
| TAACGAGGCCCAAAAGAACG+GGG | + | tig0018513:94559-94578 | Msa1367420:CDS | 50.0% | |
| ! | TAGTTCTGCTCGTACTCACG+AGG | + | tig0018513:94841-94860 | Msa1367420:CDS | 50.0% |
| GTCCCTGAAATTGACCATGC+AGG | + | tig0018513:95083-95102 | Msa1367420:intron | 50.0% | |
| GTCCCTGCATGGTCAATTTC+AGG | - | tig0018513:95089-95108 | None:intergenic | 50.0% | |
| TGACGAATCGTTCCCCATTC+AGG | + | tig0018513:95143-95162 | Msa1367420:intron | 50.0% | |
| GACGAATCGTTCCCCATTCA+GGG | + | tig0018513:95144-95163 | Msa1367420:intron | 50.0% | |
| GATTGCAGGCAGGAACATCA+AGG | + | tig0018513:95319-95338 | Msa1367420:CDS | 50.0% | |
| TTGCAGGCAGGAACATCAAG+GGG | + | tig0018513:95321-95340 | Msa1367420:CDS | 50.0% | |
| TTCGTTTGCGTAGTCCAGAG+AGG | + | tig0018513:95355-95374 | Msa1367420:CDS | 50.0% | |
| GGAGAAAGCTTCTTCCTCTC+TGG | - | tig0018513:95372-95391 | None:intergenic | 50.0% | |
| TACCTTGAAGCAGCAGGTGC+AGG | + | tig0018513:93665-93684 | Msa1367420:CDS | 55.0% | |
| !! | TCGATCGATGGATTGCAGGC+AGG | + | tig0018513:95309-95328 | Msa1367420:CDS | 55.0% |
| ! | CACCTGCACCTGCTGCTTCA+AGG | - | tig0018513:93670-93689 | None:intergenic | 60.0% |
| CTTGAAGCAGCAGGTGCAGG+TGG | + | tig0018513:93668-93687 | Msa1367420:CDS | 60.0% | |
| GCGTGAATGGGGATTCAGGG+AGG | - | tig0018513:94342-94361 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018513 | gene | 93272 | 96354 | 93272 | ID=Msa1367420;Name=Msa1367420 |
| tig0018513 | mRNA | 93272 | 96354 | 93272 | ID=Msa1367420-mRNA-1;Parent=Msa1367420;Name=Msa1367420-mRNA-1;_AED=0.24;_eAED=0.24;_QI=51|1|1|1|1|1|5|332|463 |
| tig0018513 | exon | 93272 | 93989 | 93272 | ID=Msa1367420-mRNA-1:exon:15582;Parent=Msa1367420-mRNA-1 |
| tig0018513 | exon | 94438 | 94862 | 94438 | ID=Msa1367420-mRNA-1:exon:15583;Parent=Msa1367420-mRNA-1 |
| tig0018513 | exon | 95300 | 95487 | 95300 | ID=Msa1367420-mRNA-1:exon:15584;Parent=Msa1367420-mRNA-1 |
| tig0018513 | exon | 95836 | 95896 | 95836 | ID=Msa1367420-mRNA-1:exon:15585;Parent=Msa1367420-mRNA-1 |
| tig0018513 | exon | 95972 | 96354 | 95972 | ID=Msa1367420-mRNA-1:exon:15586;Parent=Msa1367420-mRNA-1 |
| tig0018513 | five_prime_UTR | 93272 | 93322 | 93272 | ID=Msa1367420-mRNA-1:five_prime_utr;Parent=Msa1367420-mRNA-1 |
| tig0018513 | CDS | 93323 | 93989 | 93323 | ID=Msa1367420-mRNA-1:cds;Parent=Msa1367420-mRNA-1 |
| tig0018513 | CDS | 94438 | 94862 | 94438 | ID=Msa1367420-mRNA-1:cds;Parent=Msa1367420-mRNA-1 |
| tig0018513 | CDS | 95300 | 95487 | 95300 | ID=Msa1367420-mRNA-1:cds;Parent=Msa1367420-mRNA-1 |
| tig0018513 | CDS | 95836 | 95896 | 95836 | ID=Msa1367420-mRNA-1:cds;Parent=Msa1367420-mRNA-1 |
| tig0018513 | CDS | 95972 | 96022 | 95972 | ID=Msa1367420-mRNA-1:cds;Parent=Msa1367420-mRNA-1 |
| tig0018513 | three_prime_UTR | 96023 | 96354 | 96023 | ID=Msa1367420-mRNA-1:three_prime_utr;Parent=Msa1367420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
