Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367650 | XP_039690717.1 | 87.675 | 357 | 4 | 3 | 1 | 338 | 1 | 336 | 0.0 | 626 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367650 | sp|B5X582|TWIH_ARATH | 45.429 | 350 | 153 | 7 | 16 | 334 | 66 | 408 | 5.12e-87 | 279 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367650 | G7KFG5 | 87.784 | 352 | 3 | 3 | 6 | 338 | 1 | 331 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0866030 | Msa1367650 | 0.899261 | 2.360758e-77 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367650 | MtrunA17_Chr5g0448701 | 87.087 | 333 | 3 | 3 | 1 | 314 | 1 | 312 | 0.0 | 578 |
| Msa1367650 | MtrunA17_Chr2g0293321 | 75.766 | 359 | 41 | 7 | 6 | 338 | 1 | 339 | 0.0 | 516 |
| Msa1367650 | MtrunA17_Chr2g0293211 | 50.799 | 313 | 119 | 5 | 56 | 334 | 86 | 397 | 3.58e-97 | 302 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367650 | AT1G30680.1 | 45.429 | 350 | 153 | 7 | 16 | 334 | 66 | 408 | 5.21e-88 | 279 |
| Msa1367650 | AT1G30660.3 | 49.505 | 303 | 123 | 5 | 60 | 334 | 23 | 323 | 1.49e-86 | 264 |
| Msa1367650 | AT1G30660.2 | 49.505 | 303 | 123 | 5 | 60 | 334 | 26 | 326 | 1.53e-86 | 264 |
| Msa1367650 | AT1G30660.1 | 49.505 | 303 | 123 | 5 | 60 | 334 | 33 | 333 | 1.66e-86 | 264 |
Find 125 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGCTTGTTGCTTACTTTA+AGG | 0.093113 | tig0018533:+43164 | Msa1367650:intron |
| GTTATAGACAAGGTCCTTTA+TGG | 0.130566 | tig0018533:+44643 | Msa1367650:CDS |
| CGCCCCAAACCCAAAGGTTT+TGG | 0.223708 | tig0018533:+41454 | Msa1367650:CDS |
| CTTTGTTGATGCTTGTTTGT+AGG | 0.263948 | tig0018533:-46819 | None:intergenic |
| GAACAATGGAGAAAAGATTT+TGG | 0.263962 | tig0018533:+44127 | Msa1367650:CDS |
| GCACCAAAACCTTTGGGTTT+GGG | 0.271135 | tig0018533:-41457 | None:intergenic |
| TGCGATTCTCTACAAAATTA+AGG | 0.275139 | tig0018533:-46535 | None:intergenic |
| AAGCTGAGTTCATCTTTCTT+TGG | 0.292938 | tig0018533:-46104 | None:intergenic |
| AAAGGAGTCTGGAGCTGATT+TGG | 0.295968 | tig0018533:+47138 | Msa1367650:three_prime_UTR |
| CTTTGTTGATGCTTGTTTGT+AGG | 0.313060 | tig0018533:-46757 | None:intergenic |
| GGCACCAAAACCTTTGGGTT+TGG | 0.313375 | tig0018533:-41458 | None:intergenic |
| GCCGTGCCAGGCTTCTGACT+TGG | 0.324363 | tig0018533:-47201 | None:intergenic |
| GTGTAAAGGTGGACAGTTAA+TGG | 0.331736 | tig0018533:+41867 | Msa1367650:intron |
| TGATTGTGCAAGAACAAGTT+TGG | 0.339930 | tig0018533:+46864 | Msa1367650:three_prime_UTR |
| CCAGACTTTCGTATGAAACT+TGG | 0.341498 | tig0018533:+46925 | Msa1367650:three_prime_UTR |
| ACCTAGTGTGCACAAGTATA+TGG | 0.342634 | tig0018533:-46366 | None:intergenic |
| AAGAGCTAGCACGGCGCCTT+GGG | 0.357506 | tig0018533:+45511 | Msa1367650:CDS |
| TTGGGGCGAGAAAAGTGATT+TGG | 0.360080 | tig0018533:-41439 | None:intergenic |
| CCGTGCCAGGCTTCTGACTT+GGG | 0.364382 | tig0018533:-47200 | None:intergenic |
| ATGAATGGCACCAAAACCTT+TGG | 0.365791 | tig0018533:-41464 | None:intergenic |
| GAAGAGCTAGCACGGCGCCT+TGG | 0.374758 | tig0018533:+45510 | Msa1367650:CDS |
| GCACGGCCGTGCCACCTCTC+TGG | 0.377554 | tig0018533:+47259 | Msa1367650:three_prime_UTR |
| CCTTACAGAATTTCTGCTTA+AGG | 0.380916 | tig0018533:-43208 | None:intergenic |
| ACCTTAGCACGGGCCGTGCC+AGG | 0.387451 | tig0018533:-47213 | None:intergenic |
| GTGAAGCCATGTGTCATCTA+AGG | 0.394200 | tig0018533:-46681 | None:intergenic |
| AACCCTAAGCTCTCCTCATC+AGG | 0.396006 | tig0018533:-42479 | None:intergenic |
| TACATGTGGTTGGGCTGGTC+AGG | 0.399429 | tig0018533:+42332 | Msa1367650:CDS |
| GTGGAACAGCAAAGCTTACT+TGG | 0.403923 | tig0018533:+45328 | Msa1367650:CDS |
| AAAACTACAACAGGGTAACT+TGG | 0.412068 | tig0018533:-47309 | None:intergenic |
| ATAATATTTAGTCAAATGTA+AGG | 0.424827 | tig0018533:+46475 | Msa1367650:three_prime_UTR |
| TGAATGGCACCAAAACCTTT+GGG | 0.435245 | tig0018533:-41463 | None:intergenic |
| AAACCTGATGAGGAGAGCTT+AGG | 0.440096 | tig0018533:+42476 | Msa1367650:CDS |
| ACCTTTCCTGGTGCACCATC+AGG | 0.440161 | tig0018533:-44881 | None:intergenic |
| GTATGAACAATTGTAACTCT+TGG | 0.443099 | tig0018533:+46430 | Msa1367650:three_prime_UTR |
| CACCAAAACCTTTGGGTTTG+GGG | 0.445536 | tig0018533:-41456 | None:intergenic |
| TTAGACAACTCTTGTTTGCC+TGG | 0.447652 | tig0018533:+41725 | Msa1367650:CDS |
| TTAGGTGGTTCGCATTATCC+TGG | 0.449392 | tig0018533:+45452 | Msa1367650:intron |
| AATAAATTTGATTGTGAACA+AGG | 0.453230 | tig0018533:+46731 | Msa1367650:three_prime_UTR |
| TTGACCTGGTGGATCATTAT+CGG | 0.454060 | tig0018533:-45478 | None:intergenic |
| CCAAGTTTCATACGAAAGTC+TGG | 0.459369 | tig0018533:-46925 | None:intergenic |
| AAACAAAATGGGTTGATTGT+TGG | 0.461337 | tig0018533:+44093 | Msa1367650:CDS |
| GTTGTAGTGAATTTGCAATC+TGG | 0.465654 | tig0018533:+42295 | Msa1367650:intron |
| AACCTGATGAGGAGAGCTTA+GGG | 0.465798 | tig0018533:+42477 | Msa1367650:CDS |
| TAATGTCGTCAAGTCCATAA+AGG | 0.465841 | tig0018533:-44657 | None:intergenic |
| TTCTGCAGATGACAAGGAAC+TGG | 0.466614 | tig0018533:+42448 | Msa1367650:CDS |
| TTTATCTAAGAATATGAAGA+TGG | 0.467426 | tig0018533:+46401 | Msa1367650:three_prime_UTR |
| AAGCTTTCACTTGAAGAGGC+TGG | 0.467773 | tig0018533:+44836 | Msa1367650:CDS |
| AATCAAACTTATTGTGTTGG+TGG | 0.468107 | tig0018533:-46784 | None:intergenic |
| AATCAAACTTATTGTGTTGG+TGG | 0.468107 | tig0018533:-46846 | None:intergenic |
| TGATAAGCTTTCACTTGAAG+AGG | 0.469616 | tig0018533:+44832 | Msa1367650:CDS |
| CACGGCGCCTTGGGCGAGAA+AGG | 0.471934 | tig0018533:+45520 | Msa1367650:CDS |
| TTAGGATCGCGTTTCAGCTA+TGG | 0.472657 | tig0018533:-46599 | None:intergenic |
| CGTGCCAGGCTTCTGACTTG+GGG | 0.480472 | tig0018533:-47199 | None:intergenic |
| GATAATGATAATAGGTTGAG+GGG | 0.483543 | tig0018533:+44804 | Msa1367650:intron |
| GCCTGGCACGGCCCGTGCTA+AGG | 0.485393 | tig0018533:+47212 | Msa1367650:three_prime_UTR |
| AGACCTACATGTGGTTGGGC+TGG | 0.487821 | tig0018533:+42327 | Msa1367650:CDS |
| CAGCAAAGCTTACTTGGATA+AGG | 0.491598 | tig0018533:+45334 | Msa1367650:CDS |
| GTTGGAACCACTTGGTCCTA+AGG | 0.491634 | tig0018533:+42499 | Msa1367650:CDS |
| AGTAAGCTTTGCTGTTCCAC+AGG | 0.494786 | tig0018533:-45325 | None:intergenic |
| ATATATGATGGAAGAAGTCT+TGG | 0.495533 | tig0018533:+47107 | Msa1367650:three_prime_UTR |
| TGGAGCAAAAGAAAGGAGTC+TGG | 0.500477 | tig0018533:+47127 | Msa1367650:three_prime_UTR |
| TGGATACCTTTGGACAAAAG+AGG | 0.502264 | tig0018533:-41760 | None:intergenic |
| CCTTTGGACAAAAGAGGTTG+TGG | 0.510616 | tig0018533:-41754 | None:intergenic |
| GGCCTAGGTTCTCAAATACA+TGG | 0.513227 | tig0018533:+46305 | Msa1367650:intron |
| TGATAATGATAATAGGTTGA+GGG | 0.514143 | tig0018533:+44803 | Msa1367650:intron |
| ACATGTCAATTTGTCAGAGC+TGG | 0.514292 | tig0018533:+41397 | Msa1367650:CDS |
| AGCTTAGGGTTGGAACCACT+TGG | 0.515652 | tig0018533:+42491 | Msa1367650:CDS |
| AAGAATATGAAGATGGATGT+AGG | 0.516748 | tig0018533:+46408 | Msa1367650:three_prime_UTR |
| TTTCAGGAACGAATATATGA+TGG | 0.517370 | tig0018533:+47095 | Msa1367650:intron |
| ACAAAATTAAGGATCACAAT+GGG | 0.520225 | tig0018533:-46524 | None:intergenic |
| GTGGATCATTATCGGTAGCC+AGG | 0.524131 | tig0018533:-45470 | None:intergenic |
| CACAATCAAACTTATTGTGT+TGG | 0.524532 | tig0018533:-46787 | None:intergenic |
| CACAATCAAACTTATTGTGT+TGG | 0.524532 | tig0018533:-46849 | None:intergenic |
| ACGTACGTACGTACCTTTGG+TGG | 0.527924 | tig0018533:-41496 | None:intergenic |
| AGTGTTCCTGATGGTGCACC+AGG | 0.529108 | tig0018533:+44875 | Msa1367650:CDS |
| CAGACTTTCGTATGAAACTT+GGG | 0.534819 | tig0018533:+46926 | Msa1367650:three_prime_UTR |
| TCCTGATGGTGCACCAGGAA+AGG | 0.537409 | tig0018533:+44880 | Msa1367650:CDS |
| CTTCTTCAAAGATGCAAATG+AGG | 0.541918 | tig0018533:+46124 | Msa1367650:CDS |
| GAAGTCTTGGAGCAAAAGAA+AGG | 0.544530 | tig0018533:+47120 | Msa1367650:three_prime_UTR |
| AAGCACAAAGTGGAACCTCT+TGG | 0.547568 | tig0018533:+41695 | Msa1367650:CDS |
| TAAAATATTGAAGCACAAAG+TGG | 0.551755 | tig0018533:+41685 | Msa1367650:CDS |
| TACGTACCTTTGGTGGAAAG+TGG | 0.559186 | tig0018533:-41489 | None:intergenic |
| GGGCCGTGCCAACCTTAGCA+CGG | 0.560602 | tig0018533:-47224 | None:intergenic |
| GGCCCGTGCTAAGGTTGGCA+CGG | 0.562700 | tig0018533:+47242 | Msa1367650:intron |
| TTGATATGCCAGTGTAAAGG+TGG | 0.562981 | tig0018533:+41856 | Msa1367650:intron |
| GCCATATACTTGTGCACACT+AGG | 0.563415 | tig0018533:+46365 | Msa1367650:CDS |
| CTTTAGCTGAAGAGCTAGCA+CGG | 0.564457 | tig0018533:+45502 | Msa1367650:CDS |
| TAGACAACTCTTGTTTGCCT+GGG | 0.566831 | tig0018533:+41726 | Msa1367650:CDS |
| GGCCGTGCCAACCTTAGCAC+GGG | 0.567791 | tig0018533:-47223 | None:intergenic |
| GTTGTTGCAACTTTAATCGA+CGG | 0.568479 | tig0018533:+46568 | Msa1367650:three_prime_UTR |
| TCATTACCACTTTCCACCAA+AGG | 0.570913 | tig0018533:+41483 | Msa1367650:CDS |
| AAGAGGTTGTGGTAGTTCCC+AGG | 0.571323 | tig0018533:-41743 | None:intergenic |
| ATCGCGTTTCAGCTATGGCA+TGG | 0.578515 | tig0018533:-46594 | None:intergenic |
| TACAAAATTAAGGATCACAA+TGG | 0.578794 | tig0018533:-46525 | None:intergenic |
| AAACTACAACAGGGTAACTT+GGG | 0.579060 | tig0018533:-47308 | None:intergenic |
| TGATGAGGAGAGCTTAGGGT+TGG | 0.580112 | tig0018533:+42481 | Msa1367650:CDS |
| TGAATGACCTTTCTCGCCCA+AGG | 0.584678 | tig0018533:-45527 | None:intergenic |
| TCAGGTGTTGGCAAGTACGC+TGG | 0.585250 | tig0018533:+46081 | Msa1367650:intron |
| TCAGCTAAAGCTTGACCTGG+TGG | 0.586602 | tig0018533:-45489 | None:intergenic |
| CCCAAGTCAGAAGCCTGGCA+CGG | 0.589958 | tig0018533:+47200 | Msa1367650:three_prime_UTR |
| GTGCCAGGCTTCTGACTTGG+GGG | 0.599410 | tig0018533:-47198 | None:intergenic |
| GAGAAAAGTGATTTGGTGAG+AGG | 0.600510 | tig0018533:-41432 | None:intergenic |
| ATAGGTTTCTGCAGATGACA+AGG | 0.602576 | tig0018533:+42442 | Msa1367650:intron |
| TCTTCAGCTAAAGCTTGACC+TGG | 0.612094 | tig0018533:-45492 | None:intergenic |
| TGTCAATTTGTCAGAGCTGG+TGG | 0.614230 | tig0018533:+41400 | Msa1367650:CDS |
| AAGGTGGACAGTTAATGGAG+AGG | 0.614763 | tig0018533:+41872 | Msa1367650:CDS |
| GTATGAAACTTGGGCAACTG+TGG | 0.615289 | tig0018533:+46935 | Msa1367650:three_prime_UTR |
| TGAAGCCATGTGTCATCTAA+GGG | 0.625157 | tig0018533:-46680 | None:intergenic |
| TGGTGGAAAGTGGTAATGAA+TGG | 0.627860 | tig0018533:-41479 | None:intergenic |
| GCAAAAGTCATCCAGAGAGG+TGG | 0.631158 | tig0018533:-47270 | None:intergenic |
| AGTCATCCAGAGAGGTGGCA+CGG | 0.631316 | tig0018533:-47265 | None:intergenic |
| TTGAATACCTTAGGACCAAG+TGG | 0.632809 | tig0018533:-42506 | None:intergenic |
| TGACCAGCCCAACCACATGT+AGG | 0.639589 | tig0018533:-42330 | None:intergenic |
| TGGTTGCAAGTACAGAACAA+TGG | 0.639955 | tig0018533:+44113 | Msa1367650:CDS |
| ATAATGATAATAGGTTGAGG+GGG | 0.644644 | tig0018533:+44805 | Msa1367650:intron |
| GCCTAGGTTCTCAAATACAT+GGG | 0.646477 | tig0018533:+46306 | Msa1367650:intron |
| AATTGTGTTAGTGTTCCTGA+TGG | 0.656404 | tig0018533:+44866 | Msa1367650:CDS |
| ACTGGACAATAAACCTGATG+AGG | 0.661447 | tig0018533:+42466 | Msa1367650:CDS |
| TTGTCTAAGCTGATACCAAG+AGG | 0.662148 | tig0018533:-41710 | None:intergenic |
| TAGAGAATCGCAGTGAAATG+TGG | 0.663952 | tig0018533:+46546 | Msa1367650:three_prime_UTR |
| ATACTGCATATCAATACCTG+TGG | 0.667697 | tig0018533:+45309 | Msa1367650:CDS |
| GCTACCGATAATGATCCACC+AGG | 0.671318 | tig0018533:+45474 | Msa1367650:CDS |
| GTAGTGAATTTGCAATCTGG+AGG | 0.685376 | tig0018533:+42298 | Msa1367650:intron |
| ACAGGGAAAAGTTATAGACA+AGG | 0.702128 | tig0018533:+44633 | Msa1367650:intron |
| GCAGCAAAAGTCATCCAGAG+AGG | 0.709265 | tig0018533:-47273 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAAAAATAGTATAA+TGG | - | tig0018533:42909-42928 | None:intergenic | 10.0% |
| !!! | TTCTAAAAAAAATAGATTTT+GGG | - | tig0018533:43685-43704 | None:intergenic | 10.0% |
| !!! | TTTCTAAAAAAAATAGATTT+TGG | - | tig0018533:43686-43705 | None:intergenic | 10.0% |
| !! | TAAAATAATTTGAATACCTT+AGG | - | tig0018533:42518-42537 | None:intergenic | 15.0% |
| !!! | TAATTTTCATTAACAATTTG+AGG | - | tig0018533:42806-42825 | None:intergenic | 15.0% |
| !! | GAAAATTATCAAAATAATAG+AGG | + | tig0018533:42818-42837 | Msa1367650:intron | 15.0% |
| !! | ACATTTATATTCATTTAAGA+TGG | - | tig0018533:43035-43054 | None:intergenic | 15.0% |
| !! | CTTAAATGAATATAAATGTA+TGG | + | tig0018533:43036-43055 | Msa1367650:intron | 15.0% |
| !! | AAAAATGTAAAACAAGATAT+CGG | - | tig0018533:43278-43297 | None:intergenic | 15.0% |
| !!! | ATCTTGTTTTACATTTTTTT+TGG | + | tig0018533:43280-43299 | Msa1367650:intron | 15.0% |
| !!! | TATATTTTTCCAAAATCATT+AGG | + | tig0018533:43649-43668 | Msa1367650:intron | 15.0% |
| !! | ATTTATAAAAAACACTAGTA+AGG | - | tig0018533:43806-43825 | None:intergenic | 15.0% |
| !! | TTGAATCAATTATGTTAATT+AGG | - | tig0018533:44325-44344 | None:intergenic | 15.0% |
| !!! | ATTCAAATGCTAAATTTTTT+TGG | + | tig0018533:44607-44626 | Msa1367650:intron | 15.0% |
| !!! | TATAGTTTGATAATGATAAT+AGG | + | tig0018533:44796-44815 | Msa1367650:intron | 15.0% |
| !! | AAATATATAATTGAAAGAGA+AGG | - | tig0018533:45382-45401 | None:intergenic | 15.0% |
| !!! | TTTCTTTATTTTTTAATGTC+AGG | + | tig0018533:46063-46082 | Msa1367650:intron | 15.0% |
| !! | ATATTCTTAGATAAAAATCA+TGG | - | tig0018533:46396-46415 | None:intergenic | 15.0% |
| !! | ATAATATTTAGTCAAATGTA+AGG | + | tig0018533:46475-46494 | Msa1367650:three_prime_UTR | 15.0% |
| !!! | AATTGCATATTTTATATTTC+AGG | + | tig0018533:47079-47098 | Msa1367650:intron | 15.0% |
| !!! | TTTAAATTGTTTTGTGAAGA+TGG | + | tig0018533:41602-41621 | Msa1367650:intron | 20.0% |
| !! | TCTATAAAATTACTTATCCA+GGG | + | tig0018533:42158-42177 | Msa1367650:intron | 20.0% |
| !! | ACACATATAAATAGAGTAAA+TGG | - | tig0018533:42259-42278 | None:intergenic | 20.0% |
| !!! | TTATTTTATTCAGTTTCAGA+AGG | + | tig0018533:42530-42549 | Msa1367650:intron | 20.0% |
| !!! | TTATTCCAAAAGTCTTATTT+AGG | + | tig0018533:42612-42631 | Msa1367650:intron | 20.0% |
| !!! | TGATTACTATTGATTATTCT+CGG | + | tig0018533:42651-42670 | Msa1367650:intron | 20.0% |
| !! | AGATAAAATGCAACTAATAA+AGG | - | tig0018533:42727-42746 | None:intergenic | 20.0% |
| !!! | ATTTTATCTGAAGTAAACAT+AGG | + | tig0018533:42738-42757 | Msa1367650:intron | 20.0% |
| !!! | TTTTATCTGAAGTAAACATA+GGG | + | tig0018533:42739-42758 | Msa1367650:intron | 20.0% |
| !!! | TCACTTGAAATTTTGAAATA+AGG | + | tig0018533:42843-42862 | Msa1367650:intron | 20.0% |
| !! | TGAAAGAAATAAAGGAAAAT+GGG | - | tig0018533:43476-43495 | None:intergenic | 20.0% |
| !!! | GAACATTTTAAAAGTATATG+AGG | - | tig0018533:43559-43578 | None:intergenic | 20.0% |
| !! | TAAATCCTAACGTATAAAAA+TGG | - | tig0018533:43869-43888 | None:intergenic | 20.0% |
| !! | GACAACATTATAAAAAAGTA+AGG | - | tig0018533:43893-43912 | None:intergenic | 20.0% |
| !!! | CTTTTACCTATAAACAAAAT+GGG | + | tig0018533:44082-44101 | Msa1367650:CDS | 20.0% |
| !! | TAGCATTTGAATTAAAATCA+GGG | - | tig0018533:44599-44618 | None:intergenic | 20.0% |
| !! | TTAGCATTTGAATTAAAATC+AGG | - | tig0018533:44600-44619 | None:intergenic | 20.0% |
| !! | AAATGAAGATAACTTCAAAA+AGG | + | tig0018533:44757-44776 | Msa1367650:intron | 20.0% |
| !! | AATGAAGATAACTTCAAAAA+GGG | + | tig0018533:44758-44777 | Msa1367650:intron | 20.0% |
| !!! | TTGAAACATGTATTTTAGAT+GGG | - | tig0018533:45230-45249 | None:intergenic | 20.0% |
| !!! | TTATATATTTCTAGATCAGA+AGG | + | tig0018533:45392-45411 | Msa1367650:intron | 20.0% |
| !!! | TATATATTTCTAGATCAGAA+GGG | + | tig0018533:45393-45412 | Msa1367650:intron | 20.0% |
| !!! | TATTTTTCATGTTCATAGTA+AGG | + | tig0018533:45560-45579 | Msa1367650:intron | 20.0% |
| !! | TTCATTTATTTAGTTGGATA+TGG | - | tig0018533:45983-46002 | None:intergenic | 20.0% |
| !! | TACATATAATCATTCAATTG+TGG | + | tig0018533:46276-46295 | Msa1367650:intron | 20.0% |
| !! | TTTATCTAAGAATATGAAGA+TGG | + | tig0018533:46401-46420 | Msa1367650:three_prime_UTR | 20.0% |
| !! | AATAAATTTGATTGTGAACA+AGG | + | tig0018533:46731-46750 | Msa1367650:three_prime_UTR | 20.0% |
| !! | TGTAGTAAAAAGATTCAAAA+AGG | - | tig0018533:47060-47079 | None:intergenic | 20.0% |
| ! | TAAAATATTGAAGCACAAAG+TGG | + | tig0018533:41685-41704 | Msa1367650:CDS | 25.0% |
| ! | GTCTATAAAATTACTTATCC+AGG | + | tig0018533:42157-42176 | Msa1367650:intron | 25.0% |
| !!! | AGTTTGATTTGATACATTCA+AGG | + | tig0018533:42192-42211 | Msa1367650:intron | 25.0% |
| !!! | ACTCATTTTGGTTCTTAAAT+GGG | - | tig0018533:42231-42250 | None:intergenic | 25.0% |
| !!! | TACTCATTTTGGTTCTTAAA+TGG | - | tig0018533:42232-42251 | None:intergenic | 25.0% |
| !! | TAAATGGTCATTACTCATTT+TGG | - | tig0018533:42243-42262 | None:intergenic | 25.0% |
| ! | TCAAACATAGAACTTCATTA+AGG | + | tig0018533:42389-42408 | Msa1367650:intron | 25.0% |
| !! | TTACATTTTACTTGATTACG+TGG | + | tig0018533:42417-42436 | Msa1367650:intron | 25.0% |
| ! | GACAATTTATGACAAAAAGA+AGG | - | tig0018533:42591-42610 | None:intergenic | 25.0% |
| !! | AAAGACCTAAATAAGACTTT+TGG | - | tig0018533:42620-42639 | None:intergenic | 25.0% |
| !!! | GAAATTTTGAAATAAGGTTC+AGG | + | tig0018533:42849-42868 | Msa1367650:intron | 25.0% |
| ! | GTGAAAGAAATAAAGGAAAA+TGG | - | tig0018533:43477-43496 | None:intergenic | 25.0% |
| !!! | AAATGTTCTAAGACACAATA+TGG | + | tig0018533:43571-43590 | Msa1367650:intron | 25.0% |
| !! | TAAGACACAATATGGATTTT+AGG | + | tig0018533:43579-43598 | Msa1367650:intron | 25.0% |
| !! | AAGACACAATATGGATTTTA+GGG | + | tig0018533:43580-43599 | Msa1367650:intron | 25.0% |
| !! | ATGCAATTGTCACTTAAAAA+TGG | - | tig0018533:43621-43640 | None:intergenic | 25.0% |
| !! | AAAGCTAATCCTAATGATTT+TGG | - | tig0018533:43661-43680 | None:intergenic | 25.0% |
| ! | ATAAAAAACACTAGTAAGGA+GGG | - | tig0018533:43802-43821 | None:intergenic | 25.0% |
| ! | TATAAAAAACACTAGTAAGG+AGG | - | tig0018533:43803-43822 | None:intergenic | 25.0% |
| !!! | TTTGACCATTTTTATACGTT+AGG | + | tig0018533:43861-43880 | Msa1367650:intron | 25.0% |
| !! | TTGTAAATATTTTATGTGCG+TGG | + | tig0018533:43985-44004 | Msa1367650:intron | 25.0% |
| ! | AAGTTAAGAACTAACTAGTT+AGG | - | tig0018533:44026-44045 | None:intergenic | 25.0% |
| !! | GCTTTTACCTATAAACAAAA+TGG | + | tig0018533:44081-44100 | Msa1367650:CDS | 25.0% |
| !!! | AATCAACCCATTTTGTTTAT+AGG | - | tig0018533:44091-44110 | None:intergenic | 25.0% |
| ! | GTATAATTTCATAACCAGTT+AGG | + | tig0018533:44250-44269 | Msa1367650:intron | 25.0% |
| !!! | ATTTTTTTGGAGGATTAATG+TGG | + | tig0018533:44459-44478 | Msa1367650:intron | 25.0% |
| ! | CATATGAAAATGTATATGCT+TGG | - | tig0018533:44525-44544 | None:intergenic | 25.0% |
| !!! | CTAAATTTTTTTGGTGTACA+GGG | + | tig0018533:44616-44635 | Msa1367650:intron | 25.0% |
| ! | ATTTCCAACAAAAGAAGATA+TGG | - | tig0018533:44733-44752 | None:intergenic | 25.0% |
| !!! | TTGATAATGATAATAGGTTG+AGG | + | tig0018533:44802-44821 | Msa1367650:intron | 25.0% |
| !! | TGATAATGATAATAGGTTGA+GGG | + | tig0018533:44803-44822 | Msa1367650:intron | 25.0% |
| !! | ATAACACAAACCTTTTCTAT+TGG | - | tig0018533:44926-44945 | None:intergenic | 25.0% |
| ! | CATCACACTAAATATTTACT+AGG | - | tig0018533:45145-45164 | None:intergenic | 25.0% |
| !!! | GTTGAAACATGTATTTTAGA+TGG | - | tig0018533:45231-45250 | None:intergenic | 25.0% |
| ! | GATTGAAGAGATAAAACAAT+TGG | - | tig0018533:45253-45272 | None:intergenic | 25.0% |
| ! | GAACATGAAAAATAAATGAC+AGG | - | tig0018533:45554-45573 | None:intergenic | 25.0% |
| !!! | TCTCAACCATTGATTTAAAT+TGG | + | tig0018533:45822-45841 | Msa1367650:intron | 25.0% |
| !!! | AACCATTGATTTAAATTGGA+TGG | + | tig0018533:45826-45845 | Msa1367650:intron | 25.0% |
| ! | AACCATCCAATTTAAATCAA+TGG | - | tig0018533:45831-45850 | None:intergenic | 25.0% |
| ! | ATGGAAATATTTGCTCTATA+TGG | - | tig0018533:45964-45983 | None:intergenic | 25.0% |
| ! | TGTGTCTTCATTTATTTAGT+TGG | - | tig0018533:45989-46008 | None:intergenic | 25.0% |
| !!! | TATTTTTTAATGTCAGGTGT+TGG | + | tig0018533:46069-46088 | Msa1367650:intron | 25.0% |
| !! | TCTCTATATTTGATTCCTTT+TGG | + | tig0018533:46169-46188 | Msa1367650:intron | 25.0% |
| !! | CTAAGAAAATGAACTTTTCA+TGG | + | tig0018533:46197-46216 | Msa1367650:intron | 25.0% |
| ! | AATCATTCAATTGTGGTTAA+TGG | + | tig0018533:46283-46302 | Msa1367650:intron | 25.0% |
| ! | ATCATTCAATTGTGGTTAAT+GGG | + | tig0018533:46284-46303 | Msa1367650:intron | 25.0% |
| ! | ACAAAATTAAGGATCACAAT+GGG | - | tig0018533:46527-46546 | None:intergenic | 25.0% |
| ! | TACAAAATTAAGGATCACAA+TGG | - | tig0018533:46528-46547 | None:intergenic | 25.0% |
| ! | GTTAACTGAAACAAAAAACA+TGG | + | tig0018533:46898-46917 | Msa1367650:three_prime_UTR | 25.0% |
| !! | ATTGTTTTGTGAAGATGGTT+TGG | + | tig0018533:41607-41626 | Msa1367650:intron | 30.0% |
| ACCAAATACATTGAAAAGAC+TGG | - | tig0018533:41829-41848 | None:intergenic | 30.0% | |
| ! | TTTTTGATATGCCAGTGTAA+AGG | + | tig0018533:41853-41872 | Msa1367650:intron | 30.0% |
| ! | TCTTTTCACATTATCACTGA+TGG | + | tig0018533:41901-41920 | Msa1367650:CDS | 30.0% |
| ! | CTTTTCACATTATCACTGAT+GGG | + | tig0018533:41902-41921 | Msa1367650:CDS | 30.0% |
| !!! | TCTTCAACTTGTTTGTTTTG+AGG | + | tig0018533:41931-41950 | Msa1367650:intron | 30.0% |
| !!! | ACTTGTTTGTTTTGAGGTTT+TGG | + | tig0018533:41937-41956 | Msa1367650:intron | 30.0% |
| !!! | TTTTGAGGTTTTGGTGATAT+TGG | + | tig0018533:41946-41965 | Msa1367650:intron | 30.0% |
| AACAGAAGACACAATATTTG+AGG | - | tig0018533:42095-42114 | None:intergenic | 30.0% | |
| TTACTTGATTACGTGGTTAT+AGG | + | tig0018533:42424-42443 | Msa1367650:intron | 30.0% | |
| ATAAGTATGGTATGTTCAAG+TGG | + | tig0018533:42988-43007 | Msa1367650:intron | 30.0% | |
| TAAGTATGGTATGTTCAAGT+GGG | + | tig0018533:42989-43008 | Msa1367650:intron | 30.0% | |
| CTAGTCAGATTATTTGCTTA+TGG | + | tig0018533:43124-43143 | Msa1367650:intron | 30.0% | |
| AACAAGCTAAAATAGGGAAA+AGG | - | tig0018533:43154-43173 | None:intergenic | 30.0% | |
| GTAAGCAACAAGCTAAAATA+GGG | - | tig0018533:43160-43179 | None:intergenic | 30.0% | |
| AGTAAGCAACAAGCTAAAAT+AGG | - | tig0018533:43161-43180 | None:intergenic | 30.0% | |
| !! | TTAGCTTGTTGCTTACTTTA+AGG | + | tig0018533:43164-43183 | Msa1367650:intron | 30.0% |
| AATGTAAAACAAGATATCGG+AGG | - | tig0018533:43275-43294 | None:intergenic | 30.0% | |
| GGGGAACTTAAAAATTGTAT+TGG | - | tig0018533:43398-43417 | None:intergenic | 30.0% | |
| ATAGAAATCTCTCCTCATTT+GGG | - | tig0018533:43419-43438 | None:intergenic | 30.0% | |
| AATAGAAATCTCTCCTCATT+TGG | - | tig0018533:43420-43439 | None:intergenic | 30.0% | |
| AGAAATAAAGGAAAATGGGA+GGG | - | tig0018533:43472-43491 | None:intergenic | 30.0% | |
| AAGAAATAAAGGAAAATGGG+AGG | - | tig0018533:43473-43492 | None:intergenic | 30.0% | |
| TCAGCAAGTGAAAGAAATAA+AGG | - | tig0018533:43484-43503 | None:intergenic | 30.0% | |
| !! | TTTTGACTAATAGTTCTCCT+TGG | + | tig0018533:43732-43751 | Msa1367650:intron | 30.0% |
| ATTCCAATAGTAAGAGATAG+AGG | - | tig0018533:43762-43781 | None:intergenic | 30.0% | |
| TACACTTACAGGATATGATT+AGG | - | tig0018533:43919-43938 | None:intergenic | 30.0% | |
| !! | AAACAAAATGGGTTGATTGT+TGG | + | tig0018533:44093-44112 | Msa1367650:CDS | 30.0% |
| ! | GAACAATGGAGAAAAGATTT+TGG | + | tig0018533:44127-44146 | Msa1367650:CDS | 30.0% |
| !! | CAAATTTTAACATGCAAGCA+TGG | - | tig0018533:44175-44194 | None:intergenic | 30.0% |
| TCATTAATGCCACACAATAA+AGG | - | tig0018533:44285-44304 | None:intergenic | 30.0% | |
| !!! | GAGACGGAAAAGAATTTTTT+TGG | + | tig0018533:44446-44465 | Msa1367650:intron | 30.0% |
| !!! | ACGGAAAAGAATTTTTTTGG+AGG | + | tig0018533:44449-44468 | Msa1367650:intron | 30.0% |
| !!! | GCTAAATTTTTTTGGTGTAC+AGG | + | tig0018533:44615-44634 | Msa1367650:intron | 30.0% |
| CAACAAAAGAAGATATGGAT+GGG | - | tig0018533:44728-44747 | None:intergenic | 30.0% | |
| ! | GATAATGATAATAGGTTGAG+GGG | + | tig0018533:44804-44823 | Msa1367650:intron | 30.0% |
| ! | ATAATGATAATAGGTTGAGG+GGG | + | tig0018533:44805-44824 | Msa1367650:intron | 30.0% |
| !! | CTTCATAGATTCCACTTTTA+AGG | + | tig0018533:45119-45138 | Msa1367650:intron | 30.0% |
| TATTTACTAGGCCTTAAAAG+TGG | - | tig0018533:45133-45152 | None:intergenic | 30.0% | |
| TACTGATGTTTGCATCATTA+AGG | - | tig0018533:45168-45187 | None:intergenic | 30.0% | |
| GAAGGGACAACTTATTAATT+TGG | + | tig0018533:45410-45429 | Msa1367650:intron | 30.0% | |
| TTGCATTCTCTTGAAATATC+TGG | + | tig0018533:45938-45957 | Msa1367650:intron | 30.0% | |
| ! | ATTTTCTTAGAAGCTCCAAA+AGG | - | tig0018533:46187-46206 | None:intergenic | 30.0% |
| AAGAATATGAAGATGGATGT+AGG | + | tig0018533:46408-46427 | Msa1367650:three_prime_UTR | 30.0% | |
| GTATGAACAATTGTAACTCT+TGG | + | tig0018533:46430-46449 | Msa1367650:three_prime_UTR | 30.0% | |
| TGCGATTCTCTACAAAATTA+AGG | - | tig0018533:46538-46557 | None:intergenic | 30.0% | |
| ! | ACGTTTTCTATCAGCTATTT+AGG | - | tig0018533:46620-46639 | None:intergenic | 30.0% |
| AATCAAACTTATTGTGTTGG+TGG | - | tig0018533:46787-46806 | None:intergenic | 30.0% | |
| CACAATCAAACTTATTGTGT+TGG | - | tig0018533:46790-46809 | None:intergenic | 30.0% | |
| AATCAAACTTATTGTGTTGG+TGG | - | tig0018533:46787-46806 | None:intergenic | 30.0% | |
| CACAATCAAACTTATTGTGT+TGG | - | tig0018533:46790-46809 | None:intergenic | 30.0% | |
| TTTCAGGAACGAATATATGA+TGG | + | tig0018533:47095-47114 | Msa1367650:intron | 30.0% | |
| ! | ATATATGATGGAAGAAGTCT+TGG | + | tig0018533:47107-47126 | Msa1367650:three_prime_UTR | 30.0% |
| CACTGTTGAATTTCTGATCT+GGG | + | tig0018533:41527-41546 | Msa1367650:intron | 35.0% | |
| TCTCTCTACTCAACCAAAAT+GGG | + | tig0018533:41553-41572 | Msa1367650:intron | 35.0% | |
| ! | GAAAACTACATGACCCATTT+TGG | - | tig0018533:41569-41588 | None:intergenic | 35.0% |
| ! | GCCAGTCTTTTCAATGTATT+TGG | + | tig0018533:41825-41844 | Msa1367650:intron | 35.0% |
| !! | AGGTTTTGGTGATATTGGTA+TGG | + | tig0018533:41951-41970 | Msa1367650:intron | 35.0% |
| GACATATTCAAGGATCGAAA+TGG | - | tig0018533:41993-42012 | None:intergenic | 35.0% | |
| ! | GATACACTTGGGGATATTTT+TGG | - | tig0018533:42053-42072 | None:intergenic | 35.0% |
| ACAAGCAAAAGATACACTTG+GGG | - | tig0018533:42063-42082 | None:intergenic | 35.0% | |
| GACAAGCAAAAGATACACTT+GGG | - | tig0018533:42064-42083 | None:intergenic | 35.0% | |
| TGACAAGCAAAAGATACACT+TGG | - | tig0018533:42065-42084 | None:intergenic | 35.0% | |
| GTGTCTTCTGTTAGTTAGTT+TGG | + | tig0018533:42103-42122 | Msa1367650:intron | 35.0% | |
| TTATAGACCATGCTGACAAT+TGG | - | tig0018533:42145-42164 | None:intergenic | 35.0% | |
| CAAACTTTCAAAAACATCCC+TGG | - | tig0018533:42178-42197 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTCTTAAATGGGTG+AGG | - | tig0018533:42226-42245 | None:intergenic | 35.0% |
| GTTGTAGTGAATTTGCAATC+TGG | + | tig0018533:42295-42314 | Msa1367650:intron | 35.0% | |
| ! | TTTTAGACCTACATGTGGTT+GGG | + | tig0018533:42323-42342 | Msa1367650:CDS | 35.0% |
| GAAGTTCTATGTTTGAGAAC+AGG | - | tig0018533:42385-42404 | None:intergenic | 35.0% | |
| !! | ACTGCCAATTTTTCAGAATG+AGG | + | tig0018533:42560-42579 | Msa1367650:intron | 35.0% |
| ! | GCTACCTCATTCTGAAAAAT+TGG | - | tig0018533:42567-42586 | None:intergenic | 35.0% |
| !! | TGTGAGTTATGAGTATTGAG+TGG | + | tig0018533:42697-42716 | Msa1367650:intron | 35.0% |
| AATACATTGCAGTAGTAGTG+TGG | + | tig0018533:42955-42974 | Msa1367650:intron | 35.0% | |
| !! | TGGTCAATGGTTGATAAGTA+TGG | + | tig0018533:42975-42994 | Msa1367650:intron | 35.0% |
| GGCAATGTATTAACTCAACA+TGG | - | tig0018533:43093-43112 | None:intergenic | 35.0% | |
| !! | GTTAATACATTGCCACTTTC+AGG | + | tig0018533:43099-43118 | Msa1367650:intron | 35.0% |
| CCTTACAGAATTTCTGCTTA+AGG | - | tig0018533:43211-43230 | None:intergenic | 35.0% | |
| CCTTAAGCAGAAATTCTGTA+AGG | + | tig0018533:43208-43227 | Msa1367650:intron | 35.0% | |
| AAATTCTGTAAGGCAACTCT+CGG | + | tig0018533:43218-43237 | Msa1367650:intron | 35.0% | |
| !!! | GGACGAAAAGGTATTTTCAA+TGG | + | tig0018533:43239-43258 | Msa1367650:intron | 35.0% |
| !!! | TTTTTAAGTTCCCCCAAATG+AGG | + | tig0018533:43404-43423 | Msa1367650:intron | 35.0% |
| TAGAAATCTCTCCTCATTTG+GGG | - | tig0018533:43418-43437 | None:intergenic | 35.0% | |
| GAAATAAAGGAAAATGGGAG+GGG | - | tig0018533:43471-43490 | None:intergenic | 35.0% | |
| !! | ACTTAAGCTTTGTTTGCAAG+GGG | - | tig0018533:43531-43550 | None:intergenic | 35.0% |
| !! | CACTTAAGCTTTGTTTGCAA+GGG | - | tig0018533:43532-43551 | None:intergenic | 35.0% |
| !! | ACACTTAAGCTTTGTTTGCA+AGG | - | tig0018533:43533-43552 | None:intergenic | 35.0% |
| CTTCCTCTATCTCTTACTAT+TGG | + | tig0018533:43756-43775 | Msa1367650:intron | 35.0% | |
| AAATGGTCAAATCTCGTCTT+AGG | - | tig0018533:43852-43871 | None:intergenic | 35.0% | |
| ATAGCATTGCATACACTTAC+AGG | - | tig0018533:43930-43949 | None:intergenic | 35.0% | |
| !! | AATGGAGAAAAGATTTTGGC+AGG | + | tig0018533:44131-44150 | Msa1367650:CDS | 35.0% |
| AATTTCATAACCAGTTAGGC+AGG | + | tig0018533:44254-44273 | Msa1367650:intron | 35.0% | |
| TGATGACTATACGTTAGAGA+CGG | + | tig0018533:44430-44449 | Msa1367650:intron | 35.0% | |
| TAATTGGTCCTCCAAATATC+AGG | - | tig0018533:44491-44510 | None:intergenic | 35.0% | |
| ATATTTGGAGGACCAATTAG+AGG | + | tig0018533:44492-44511 | Msa1367650:intron | 35.0% | |
| TATTTGGAGGACCAATTAGA+GGG | + | tig0018533:44493-44512 | Msa1367650:intron | 35.0% | |
| ACAGGGAAAAGTTATAGACA+AGG | + | tig0018533:44633-44652 | Msa1367650:intron | 35.0% | |
| GTTATAGACAAGGTCCTTTA+TGG | + | tig0018533:44643-44662 | Msa1367650:CDS | 35.0% | |
| TAATGTCGTCAAGTCCATAA+AGG | - | tig0018533:44660-44679 | None:intergenic | 35.0% | |
| TGGATGGGAAAATAGGTTTA+GGG | - | tig0018533:44713-44732 | None:intergenic | 35.0% | |
| ATGGATGGGAAAATAGGTTT+AGG | - | tig0018533:44714-44733 | None:intergenic | 35.0% | |
| GAAGATATGGATGGGAAAAT+AGG | - | tig0018533:44720-44739 | None:intergenic | 35.0% | |
| CCAACAAAAGAAGATATGGA+TGG | - | tig0018533:44729-44748 | None:intergenic | 35.0% | |
| ! | CCATCCATATCTTCTTTTGT+TGG | + | tig0018533:44726-44745 | Msa1367650:intron | 35.0% |
| TGATAAGCTTTCACTTGAAG+AGG | + | tig0018533:44832-44851 | Msa1367650:CDS | 35.0% | |
| AATTGTGTTAGTGTTCCTGA+TGG | + | tig0018533:44866-44885 | Msa1367650:CDS | 35.0% | |
| !! | TCTTTTGAAGATACCTTTCC+TGG | - | tig0018533:44896-44915 | None:intergenic | 35.0% |
| ! | ACACAAACCTTTTCTATTGG+TGG | - | tig0018533:44923-44942 | None:intergenic | 35.0% |
| ATGCTTGTCTTTATGAAGTC+AGG | + | tig0018533:45286-45305 | Msa1367650:intron | 35.0% | |
| ATACTGCATATCAATACCTG+TGG | + | tig0018533:45309-45328 | Msa1367650:CDS | 35.0% | |
| ! | TTCCTTTCTCCCATTCTTTT+AGG | + | tig0018533:45434-45453 | Msa1367650:intron | 35.0% |
| TTGAGGTGCAATTAATCGTT+GGG | - | tig0018533:45682-45701 | None:intergenic | 35.0% | |
| AAGCTGAGTTCATCTTTCTT+TGG | - | tig0018533:46107-46126 | None:intergenic | 35.0% | |
| CTTCTTCAAAGATGCAAATG+AGG | + | tig0018533:46124-46143 | Msa1367650:CDS | 35.0% | |
| ATGCAAATGAGGTATAACTC+AGG | + | tig0018533:46135-46154 | Msa1367650:intron | 35.0% | |
| ! | AAGGTTTTTAATAGCAGTCG+TGG | + | tig0018533:46494-46513 | Msa1367650:three_prime_UTR | 35.0% |
| GTTGTTGCAACTTTAATCGA+CGG | + | tig0018533:46568-46587 | Msa1367650:three_prime_UTR | 35.0% | |
| AAAAACCCTTAGATGACACA+TGG | + | tig0018533:46675-46694 | Msa1367650:three_prime_UTR | 35.0% | |
| CTTTGTTGATGCTTGTTTGT+AGG | - | tig0018533:46760-46779 | None:intergenic | 35.0% | |
| CTTTGTTGATGCTTGTTTGT+AGG | - | tig0018533:46760-46779 | None:intergenic | 35.0% | |
| TGATTGTGCAAGAACAAGTT+TGG | + | tig0018533:46864-46883 | Msa1367650:three_prime_UTR | 35.0% | |
| CAGACTTTCGTATGAAACTT+GGG | + | tig0018533:46926-46945 | Msa1367650:three_prime_UTR | 35.0% | |
| !!! | ACTTTTGCTGCTTTTGCTTT+AGG | + | tig0018533:47285-47304 | Msa1367650:three_prime_UTR | 35.0% |
| ACATGTCAATTTGTCAGAGC+TGG | + | tig0018533:41397-41416 | Msa1367650:CDS | 40.0% | |
| !! | GAGAAAAGTGATTTGGTGAG+AGG | - | tig0018533:41435-41454 | None:intergenic | 40.0% |
| TGAATGGCACCAAAACCTTT+GGG | - | tig0018533:41466-41485 | None:intergenic | 40.0% | |
| ATGAATGGCACCAAAACCTT+TGG | - | tig0018533:41467-41486 | None:intergenic | 40.0% | |
| ! | TGGTGGAAAGTGGTAATGAA+TGG | - | tig0018533:41482-41501 | None:intergenic | 40.0% |
| TCATTACCACTTTCCACCAA+AGG | + | tig0018533:41483-41502 | Msa1367650:CDS | 40.0% | |
| CCAGATCAGAAATTCAACAG+TGG | - | tig0018533:41529-41548 | None:intergenic | 40.0% | |
| CCACTGTTGAATTTCTGATC+TGG | + | tig0018533:41526-41545 | Msa1367650:intron | 40.0% | |
| CTCTCTCTACTCAACCAAAA+TGG | + | tig0018533:41552-41571 | Msa1367650:intron | 40.0% | |
| TTGTCTAAGCTGATACCAAG+AGG | - | tig0018533:41713-41732 | None:intergenic | 40.0% | |
| ! | TTAGACAACTCTTGTTTGCC+TGG | + | tig0018533:41725-41744 | Msa1367650:CDS | 40.0% |
| ! | TAGACAACTCTTGTTTGCCT+GGG | + | tig0018533:41726-41745 | Msa1367650:CDS | 40.0% |
| TGGATACCTTTGGACAAAAG+AGG | - | tig0018533:41763-41782 | None:intergenic | 40.0% | |
| GGAAGAAAAGTGGATACCTT+TGG | - | tig0018533:41773-41792 | None:intergenic | 40.0% | |
| ATAGCTAGGTGGAAGAAAAG+TGG | - | tig0018533:41783-41802 | None:intergenic | 40.0% | |
| TTGATATGCCAGTGTAAAGG+TGG | + | tig0018533:41856-41875 | Msa1367650:intron | 40.0% | |
| TTAACTGTCCACCTTTACAC+TGG | - | tig0018533:41867-41886 | None:intergenic | 40.0% | |
| GTGTAAAGGTGGACAGTTAA+TGG | + | tig0018533:41867-41886 | Msa1367650:intron | 40.0% | |
| ! | GGTGATATTGGTATGGACTA+TGG | + | tig0018533:41958-41977 | Msa1367650:intron | 40.0% |
| GACAACGTCTGACATATTCA+AGG | - | tig0018533:42003-42022 | None:intergenic | 40.0% | |
| ! | GTGTTTTCCAATTGTCAGCA+TGG | + | tig0018533:42135-42154 | Msa1367650:intron | 40.0% |
| CTACAACACACAAATGCAAG+AGG | - | tig0018533:42282-42301 | None:intergenic | 40.0% | |
| GTAGTGAATTTGCAATCTGG+AGG | + | tig0018533:42298-42317 | Msa1367650:intron | 40.0% | |
| !! | AGGTGTTTTAGACCTACATG+TGG | + | tig0018533:42318-42337 | Msa1367650:CDS | 40.0% |
| !! | GTTTTAGACCTACATGTGGT+TGG | + | tig0018533:42322-42341 | Msa1367650:CDS | 40.0% |
| ATAGGTTTCTGCAGATGACA+AGG | + | tig0018533:42442-42461 | Msa1367650:intron | 40.0% | |
| ACTGGACAATAAACCTGATG+AGG | + | tig0018533:42466-42485 | Msa1367650:CDS | 40.0% | |
| TTGAATACCTTAGGACCAAG+TGG | - | tig0018533:42509-42528 | None:intergenic | 40.0% | |
| TTGATTATTCTCGGAGCACA+AGG | + | tig0018533:42660-42679 | Msa1367650:intron | 40.0% | |
| TTGACCCTTGAACATAAGGA+GGG | - | tig0018533:42884-42903 | None:intergenic | 40.0% | |
| TTTGACCCTTGAACATAAGG+AGG | - | tig0018533:42885-42904 | None:intergenic | 40.0% | |
| GGATTTGACCCTTGAACATA+AGG | - | tig0018533:42888-42907 | None:intergenic | 40.0% | |
| ! | AAACAGAAGCGGTTCTGATA+AGG | - | tig0018533:43062-43081 | None:intergenic | 40.0% |
| ! | ATCAGAACCGCTTCTGTTTT+TGG | + | tig0018533:43063-43082 | Msa1367650:intron | 40.0% |
| AGAAATCTCTCCTCATTTGG+GGG | - | tig0018533:43417-43436 | None:intergenic | 40.0% | |
| TAAGAGATAGAGGAAGACCA+AGG | - | tig0018533:43752-43771 | None:intergenic | 40.0% | |
| !! | TATGTGCGTGGTTTAGTTCT+TGG | + | tig0018533:43997-44016 | Msa1367650:intron | 40.0% |
| TGGTTGCAAGTACAGAACAA+TGG | + | tig0018533:44113-44132 | Msa1367650:CDS | 40.0% | |
| TGTGGTTACAGCCTGATATT+TGG | + | tig0018533:44477-44496 | Msa1367650:intron | 40.0% | |
| CTTGGAGTAAACCCTCTAAT+TGG | - | tig0018533:44507-44526 | None:intergenic | 40.0% | |
| AGATCTGCCACCAATAGAAA+AGG | + | tig0018533:44913-44932 | Msa1367650:intron | 40.0% | |
| AGTAGCACAGACACTTCTAA+GGG | + | tig0018533:44973-44992 | Msa1367650:intron | 40.0% | |
| GATTGAACGTAATCACGTGT+CGG | - | tig0018533:45021-45040 | None:intergenic | 40.0% | |
| CAGCAAAGCTTACTTGGATA+AGG | + | tig0018533:45334-45353 | Msa1367650:CDS | 40.0% | |
| CACCTAAAAGAATGGGAGAA+AGG | - | tig0018533:45439-45458 | None:intergenic | 40.0% | |
| ! | CTTTCTCCCATTCTTTTAGG+TGG | + | tig0018533:45437-45456 | Msa1367650:intron | 40.0% |
| TGCGAACCACCTAAAAGAAT+GGG | - | tig0018533:45446-45465 | None:intergenic | 40.0% | |
| ATGCGAACCACCTAAAAGAA+TGG | - | tig0018533:45447-45466 | None:intergenic | 40.0% | |
| ! | TTGACCTGGTGGATCATTAT+CGG | - | tig0018533:45481-45500 | None:intergenic | 40.0% |
| GTGCACATAGTATGTTGCAT+GGG | + | tig0018533:45620-45639 | Msa1367650:intron | 40.0% | |
| GTTGAGGTGCAATTAATCGT+TGG | - | tig0018533:45683-45702 | None:intergenic | 40.0% | |
| ! | CTCTGCAATCGATTTACGAT+CGG | + | tig0018533:45759-45778 | Msa1367650:intron | 40.0% |
| ! | TCTGCAATCGATTTACGATC+GGG | + | tig0018533:45760-45779 | Msa1367650:intron | 40.0% |
| ACAATGCGTTAAGCAGTTGA+GGG | - | tig0018533:45898-45917 | None:intergenic | 40.0% | |
| ATGAAGACACATCCTGAATC+CGG | + | tig0018533:45998-46017 | Msa1367650:intron | 40.0% | |
| GGACCTAAGAAAGATGAACT+CGG | + | tig0018533:46031-46050 | Msa1367650:intron | 40.0% | |
| AAGCCGAGTTCATCTTTCTT+AGG | - | tig0018533:46037-46056 | None:intergenic | 40.0% | |
| GCCTAGGTTCTCAAATACAT+GGG | + | tig0018533:46306-46325 | Msa1367650:intron | 40.0% | |
| TCCCATGTATTTGAGAACCT+AGG | - | tig0018533:46310-46329 | None:intergenic | 40.0% | |
| TAGAGAATCGCAGTGAAATG+TGG | + | tig0018533:46546-46565 | Msa1367650:three_prime_UTR | 40.0% | |
| TGAAGCCATGTGTCATCTAA+GGG | - | tig0018533:46683-46702 | None:intergenic | 40.0% | |
| CCAAGTTTCATACGAAAGTC+TGG | - | tig0018533:46928-46947 | None:intergenic | 40.0% | |
| CCAGACTTTCGTATGAAACT+TGG | + | tig0018533:46925-46944 | Msa1367650:three_prime_UTR | 40.0% | |
| GAAGTCTTGGAGCAAAAGAA+AGG | + | tig0018533:47120-47139 | Msa1367650:three_prime_UTR | 40.0% | |
| TGTCAATTTGTCAGAGCTGG+TGG | + | tig0018533:41400-41419 | Msa1367650:CDS | 45.0% | |
| TTGGGGCGAGAAAAGTGATT+TGG | - | tig0018533:41442-41461 | None:intergenic | 45.0% | |
| ! | CACCAAAACCTTTGGGTTTG+GGG | - | tig0018533:41459-41478 | None:intergenic | 45.0% |
| ! | GCACCAAAACCTTTGGGTTT+GGG | - | tig0018533:41460-41479 | None:intergenic | 45.0% |
| TACGTACCTTTGGTGGAAAG+TGG | - | tig0018533:41492-41511 | None:intergenic | 45.0% | |
| AAGCACAAAGTGGAACCTCT+TGG | + | tig0018533:41695-41714 | Msa1367650:CDS | 45.0% | |
| CCTTTGGACAAAAGAGGTTG+TGG | - | tig0018533:41757-41776 | None:intergenic | 45.0% | |
| ! | CCACAACCTCTTTTGTCCAA+AGG | + | tig0018533:41754-41773 | Msa1367650:CDS | 45.0% |
| CAGCTTAAGTCATAGCTAGG+TGG | - | tig0018533:41794-41813 | None:intergenic | 45.0% | |
| CTGCAGCTTAAGTCATAGCT+AGG | - | tig0018533:41797-41816 | None:intergenic | 45.0% | |
| CTAGCTATGACTTAAGCTGC+AGG | + | tig0018533:41795-41814 | Msa1367650:intron | 45.0% | |
| TGACTTAAGCTGCAGGTAAC+AGG | + | tig0018533:41802-41821 | Msa1367650:intron | 45.0% | |
| GACTTAAGCTGCAGGTAACA+GGG | + | tig0018533:41803-41822 | Msa1367650:intron | 45.0% | |
| AAGGTGGACAGTTAATGGAG+AGG | + | tig0018533:41872-41891 | Msa1367650:CDS | 45.0% | |
| TTCTGCAGATGACAAGGAAC+TGG | + | tig0018533:42448-42467 | Msa1367650:CDS | 45.0% | |
| AAACCTGATGAGGAGAGCTT+AGG | + | tig0018533:42476-42495 | Msa1367650:CDS | 45.0% | |
| AACCTGATGAGGAGAGCTTA+GGG | + | tig0018533:42477-42496 | Msa1367650:CDS | 45.0% | |
| TCTACCCCTCCTTATGTTCA+AGG | + | tig0018533:42876-42895 | Msa1367650:intron | 45.0% | |
| CTACCCCTCCTTATGTTCAA+GGG | + | tig0018533:42877-42896 | Msa1367650:intron | 45.0% | |
| TGACCCTTGAACATAAGGAG+GGG | - | tig0018533:42883-42902 | None:intergenic | 45.0% | |
| TGCAGTAGTAGTGTGGTCAA+TGG | + | tig0018533:42962-42981 | Msa1367650:intron | 45.0% | |
| GTATGTTCAAGTGGGTACCA+AGG | + | tig0018533:42997-43016 | Msa1367650:intron | 45.0% | |
| AGTGGGTACCAAGGAAGTTA+AGG | + | tig0018533:43006-43025 | Msa1367650:intron | 45.0% | |
| ! | GATGGTAGCCTTAACTTCCT+TGG | - | tig0018533:43017-43036 | None:intergenic | 45.0% |
| TGGACAGCCAAAAACAGAAG+CGG | - | tig0018533:43073-43092 | None:intergenic | 45.0% | |
| ATCTGACTAGCACCTGAAAG+TGG | - | tig0018533:43114-43133 | None:intergenic | 45.0% | |
| ATAAAGGAAAATGGGAGGGG+AGG | - | tig0018533:43468-43487 | None:intergenic | 45.0% | |
| !! | GAAGGGAGGCTTTGGAAAAA+AGG | - | tig0018533:43509-43528 | None:intergenic | 45.0% |
| !! | AGCTTTGTTTGCAAGGGGAA+GGG | - | tig0018533:43526-43545 | None:intergenic | 45.0% |
| !! | AAGCTTTGTTTGCAAGGGGA+AGG | - | tig0018533:43527-43546 | None:intergenic | 45.0% |
| CATGCAAGCATGGTTTGAAC+TGG | - | tig0018533:44165-44184 | None:intergenic | 45.0% | |
| TTCATAACCAGTTAGGCAGG+TGG | + | tig0018533:44257-44276 | Msa1367650:intron | 45.0% | |
| CAGGTGGTTCCTTTATTGTG+TGG | + | tig0018533:44273-44292 | Msa1367650:intron | 45.0% | |
| GGTTACAGCCTGATATTTGG+AGG | + | tig0018533:44480-44499 | Msa1367650:intron | 45.0% | |
| AAGCTTTCACTTGAAGAGGC+TGG | + | tig0018533:44836-44855 | Msa1367650:CDS | 45.0% | |
| CAGTAGCACAGACACTTCTA+AGG | + | tig0018533:44972-44991 | Msa1367650:intron | 45.0% | |
| ! | CTTCTAAGGGAATGTGTGTC+CGG | + | tig0018533:44986-45005 | Msa1367650:intron | 45.0% |
| CACCAGACATGACACTTACA+CGG | - | tig0018533:45081-45100 | None:intergenic | 45.0% | |
| !! | AGTAAGCTTTGCTGTTCCAC+AGG | - | tig0018533:45328-45347 | None:intergenic | 45.0% |
| GTGGAACAGCAAAGCTTACT+TGG | + | tig0018533:45328-45347 | Msa1367650:CDS | 45.0% | |
| TTAGGTGGTTCGCATTATCC+TGG | + | tig0018533:45452-45471 | Msa1367650:intron | 45.0% | |
| TCTTCAGCTAAAGCTTGACC+TGG | - | tig0018533:45495-45514 | None:intergenic | 45.0% | |
| CTTTAGCTGAAGAGCTAGCA+CGG | + | tig0018533:45502-45521 | Msa1367650:CDS | 45.0% | |
| CGTGCACATAGTATGTTGCA+TGG | + | tig0018533:45619-45638 | Msa1367650:intron | 45.0% | |
| ATTGTTACTGCAGGGAATCC+AGG | - | tig0018533:45712-45731 | None:intergenic | 45.0% | |
| TGCGTGGTATTGTTACTGCA+GGG | - | tig0018533:45720-45739 | None:intergenic | 45.0% | |
| GATTGTTACGAGTAACTGCG+TGG | - | tig0018533:45736-45755 | None:intergenic | 45.0% | |
| CACAATGCGTTAAGCAGTTG+AGG | - | tig0018533:45899-45918 | None:intergenic | 45.0% | |
| ! | CAATTGTGGTTAATGGGCCT+AGG | + | tig0018533:46290-46309 | Msa1367650:intron | 45.0% |
| GGCCTAGGTTCTCAAATACA+TGG | + | tig0018533:46305-46324 | Msa1367650:intron | 45.0% | |
| TTAGGATCGCGTTTCAGCTA+TGG | - | tig0018533:46602-46621 | None:intergenic | 45.0% | |
| GTGAAGCCATGTGTCATCTA+AGG | - | tig0018533:46684-46703 | None:intergenic | 45.0% | |
| GTATGAAACTTGGGCAACTG+TGG | + | tig0018533:46935-46954 | Msa1367650:three_prime_UTR | 45.0% | |
| AAACTTGGGCAACTGTGGTA+CGG | + | tig0018533:46940-46959 | Msa1367650:intron | 45.0% | |
| TGGAGCAAAAGAAAGGAGTC+TGG | + | tig0018533:47127-47146 | Msa1367650:three_prime_UTR | 45.0% | |
| ! | AAAGGAGTCTGGAGCTGATT+TGG | + | tig0018533:47138-47157 | Msa1367650:three_prime_UTR | 45.0% |
| !!! | ATATGATTTTTTTTTTTTTT+TGG | + | tig0018533:44540-44559 | Msa1367650:intron | 5.0% |
| ! | TTTTCTCGCCCCAAACCCAA+AGG | + | tig0018533:41448-41467 | Msa1367650:CDS | 50.0% |
| ! | GGCACCAAAACCTTTGGGTT+TGG | - | tig0018533:41461-41480 | None:intergenic | 50.0% |
| ACGTACGTACGTACCTTTGG+TGG | - | tig0018533:41499-41518 | None:intergenic | 50.0% | |
| CGTACGTACGTACGTACCTT+TGG | - | tig0018533:41502-41521 | None:intergenic | 50.0% | |
| AAGAGGTTGTGGTAGTTCCC+AGG | - | tig0018533:41746-41765 | None:intergenic | 50.0% | |
| AACCCTAAGCTCTCCTCATC+AGG | - | tig0018533:42482-42501 | None:intergenic | 50.0% | |
| TGATGAGGAGAGCTTAGGGT+TGG | + | tig0018533:42481-42500 | Msa1367650:CDS | 50.0% | |
| AGCTTAGGGTTGGAACCACT+TGG | + | tig0018533:42491-42510 | Msa1367650:CDS | 50.0% | |
| GTTGGAACCACTTGGTCCTA+AGG | + | tig0018533:42499-42518 | Msa1367650:CDS | 50.0% | |
| AAGGCAACTCTCGGACGAAA+AGG | + | tig0018533:43227-43246 | Msa1367650:intron | 50.0% | |
| AAATGGGAGGGGAGGACTTT+GGG | - | tig0018533:43460-43479 | None:intergenic | 50.0% | |
| AAAATGGGAGGGGAGGACTT+TGG | - | tig0018533:43461-43480 | None:intergenic | 50.0% | |
| TTTGTTTGCAAGGGGAAGGG+AGG | - | tig0018533:43523-43542 | None:intergenic | 50.0% | |
| AAAGGAACCACCTGCCTAAC+TGG | - | tig0018533:44267-44286 | None:intergenic | 50.0% | |
| ! | ACGTAATCACGTGTCGGTGT+CGG | - | tig0018533:45015-45034 | None:intergenic | 50.0% |
| TTACACGGACACGTTGAGAC+TGG | - | tig0018533:45066-45085 | None:intergenic | 50.0% | |
| GTCCGTGTAAGTGTCATGTC+TGG | + | tig0018533:45076-45095 | Msa1367650:intron | 50.0% | |
| GTGGATCATTATCGGTAGCC+AGG | - | tig0018533:45473-45492 | None:intergenic | 50.0% | |
| GCTACCGATAATGATCCACC+AGG | + | tig0018533:45474-45493 | Msa1367650:CDS | 50.0% | |
| TCAGCTAAAGCTTGACCTGG+TGG | - | tig0018533:45492-45511 | None:intergenic | 50.0% | |
| TGAATGACCTTTCTCGCCCA+AGG | - | tig0018533:45530-45549 | None:intergenic | 50.0% | |
| TTGCACCTCAACTACAGACC+TGG | + | tig0018533:45691-45710 | Msa1367650:intron | 50.0% | |
| GGAATCCAGGTCTGTAGTTG+AGG | - | tig0018533:45699-45718 | None:intergenic | 50.0% | |
| CTGCGTGGTATTGTTACTGC+AGG | - | tig0018533:45721-45740 | None:intergenic | 50.0% | |
| CTTAGGTCCATTATGAGCGC+CGG | - | tig0018533:46020-46039 | None:intergenic | 50.0% | |
| ATCGCGTTTCAGCTATGGCA+TGG | - | tig0018533:46597-46616 | None:intergenic | 50.0% | |
| GCAAAAGTCATCCAGAGAGG+TGG | - | tig0018533:47273-47292 | None:intergenic | 50.0% | |
| GCAGCAAAAGTCATCCAGAG+AGG | - | tig0018533:47276-47295 | None:intergenic | 50.0% | |
| ! | CGCCCCAAACCCAAAGGTTT+TGG | + | tig0018533:41454-41473 | Msa1367650:CDS | 55.0% |
| AGACCTACATGTGGTTGGGC+TGG | + | tig0018533:42327-42346 | Msa1367650:CDS | 55.0% | |
| TGACCAGCCCAACCACATGT+AGG | - | tig0018533:42333-42352 | None:intergenic | 55.0% | |
| !! | TACATGTGGTTGGGCTGGTC+AGG | + | tig0018533:42332-42351 | Msa1367650:CDS | 55.0% |
| AATGGGAGGGGAGGACTTTG+GGG | - | tig0018533:43459-43478 | None:intergenic | 55.0% | |
| ! | AGTGTTCCTGATGGTGCACC+AGG | + | tig0018533:44875-44894 | Msa1367650:CDS | 55.0% |
| ! | TCCTGATGGTGCACCAGGAA+AGG | + | tig0018533:44880-44899 | Msa1367650:CDS | 55.0% |
| ACCTTTCCTGGTGCACCATC+AGG | - | tig0018533:44884-44903 | None:intergenic | 55.0% | |
| TTGCGCTCGAACTTGCAGCT+TGG | + | tig0018533:45647-45666 | Msa1367650:intron | 55.0% | |
| !! | CCATTATGAGCGCCGGATTC+AGG | - | tig0018533:46013-46032 | None:intergenic | 55.0% |
| CCTGAATCCGGCGCTCATAA+TGG | + | tig0018533:46010-46029 | Msa1367650:intron | 55.0% | |
| !! | TCAGGTGTTGGCAAGTACGC+TGG | + | tig0018533:46081-46100 | Msa1367650:intron | 55.0% |
| AGTCATCCAGAGAGGTGGCA+CGG | - | tig0018533:47268-47287 | None:intergenic | 55.0% | |
| ATGGGAGGGGAGGACTTTGG+GGG | - | tig0018533:43458-43477 | None:intergenic | 60.0% | |
| TGCAAGGGGAAGGGAGGCTT+TGG | - | tig0018533:43517-43536 | None:intergenic | 60.0% | |
| AAGAGCTAGCACGGCGCCTT+GGG | + | tig0018533:45511-45530 | Msa1367650:CDS | 60.0% | |
| CTTGGGCAACTGTGGTACGG+AGG | + | tig0018533:46943-46962 | Msa1367650:intron | 60.0% | |
| TCTCCCCCAAGTCAGAAGCC+TGG | + | tig0018533:47195-47214 | Msa1367650:three_prime_UTR | 60.0% | |
| !! | GTGCCAGGCTTCTGACTTGG+GGG | - | tig0018533:47201-47220 | None:intergenic | 60.0% |
| ! | CGTGCCAGGCTTCTGACTTG+GGG | - | tig0018533:47202-47221 | None:intergenic | 60.0% |
| CCGTGCCAGGCTTCTGACTT+GGG | - | tig0018533:47203-47222 | None:intergenic | 60.0% | |
| CCCAAGTCAGAAGCCTGGCA+CGG | + | tig0018533:47200-47219 | Msa1367650:three_prime_UTR | 60.0% | |
| !! | CACGTGTCGGTGTCGGACAC+CGG | - | tig0018533:45008-45027 | None:intergenic | 65.0% |
| GAAGAGCTAGCACGGCGCCT+TGG | + | tig0018533:45510-45529 | Msa1367650:CDS | 65.0% | |
| GCCGTGCCAGGCTTCTGACT+TGG | - | tig0018533:47204-47223 | None:intergenic | 65.0% | |
| GGCCCGTGCTAAGGTTGGCA+CGG | + | tig0018533:47221-47240 | Msa1367650:intron | 65.0% | |
| GGCCGTGCCAACCTTAGCAC+GGG | - | tig0018533:47226-47245 | None:intergenic | 65.0% | |
| GGGCCGTGCCAACCTTAGCA+CGG | - | tig0018533:47227-47246 | None:intergenic | 65.0% | |
| GGCCCGTGCTAAGGTTGGCA+CGG | + | tig0018533:47221-47240 | Msa1367650:intron | 65.0% | |
| GGCCGTGCCAACCTTAGCAC+GGG | - | tig0018533:47226-47245 | None:intergenic | 65.0% | |
| CGGCCGTGCCAACCTTAGCA+CGG | - | tig0018533:47248-47267 | None:intergenic | 65.0% | |
| CACGGCGCCTTGGGCGAGAA+AGG | + | tig0018533:45520-45539 | Msa1367650:CDS | 70.0% | |
| ACCTTAGCACGGGCCGTGCC+AGG | - | tig0018533:47216-47235 | None:intergenic | 70.0% | |
| GGCACGGCCCGTGCTAAGGT+TGG | + | tig0018533:47216-47235 | Msa1367650:intron | 70.0% | |
| GGTTGGCACGGCCCGTGCTA+AGG | + | tig0018533:47233-47252 | Msa1367650:intron | 70.0% | |
| GGCACGGCCCGTGCTAAGGT+TGG | + | tig0018533:47216-47235 | Msa1367650:intron | 70.0% | |
| GCCTGGCACGGCCCGTGCTA+AGG | + | tig0018533:47212-47231 | Msa1367650:three_prime_UTR | 75.0% | |
| GCACGGCCGTGCCACCTCTC+TGG | + | tig0018533:47259-47278 | Msa1367650:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018533 | gene | 41384 | 47321 | 41384 | ID=Msa1367650;Name=Msa1367650 |
| tig0018533 | mRNA | 41384 | 47321 | 41384 | ID=Msa1367650-mRNA-1;Parent=Msa1367650;Name=Msa1367650-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0.78|0.73|1|0.78|0.8|15|770|338 |
| tig0018533 | exon | 41384 | 41504 | 41384 | ID=Msa1367650-mRNA-1:exon:24;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 41621 | 41775 | 41621 | ID=Msa1367650-mRNA-1:exon:25;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 41868 | 41923 | 41868 | ID=Msa1367650-mRNA-1:exon:26;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 42302 | 42353 | 42302 | ID=Msa1367650-mRNA-1:exon:27;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 42446 | 42520 | 42446 | ID=Msa1367650-mRNA-1:exon:28;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 43168 | 43224 | 43168 | ID=Msa1367650-mRNA-1:exon:29;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 44072 | 44152 | 44072 | ID=Msa1367650-mRNA-1:exon:30;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 44637 | 44702 | 44637 | ID=Msa1367650-mRNA-1:exon:31;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 44818 | 44901 | 44818 | ID=Msa1367650-mRNA-1:exon:32;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 45308 | 45355 | 45308 | ID=Msa1367650-mRNA-1:exon:33;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 45456 | 45541 | 45456 | ID=Msa1367650-mRNA-1:exon:34;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 46085 | 46145 | 46085 | ID=Msa1367650-mRNA-1:exon:35;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 46312 | 46956 | 46312 | ID=Msa1367650-mRNA-1:exon:36;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 47101 | 47233 | 47101 | ID=Msa1367650-mRNA-1:exon:37;Parent=Msa1367650-mRNA-1 |
| tig0018533 | exon | 47255 | 47321 | 47255 | ID=Msa1367650-mRNA-1:exon:38;Parent=Msa1367650-mRNA-1 |
| tig0018533 | CDS | 41384 | 41504 | 41384 | ID=Msa1367650-mRNA-1:cds;Parent=Msa1367650-mRNA-1 |
| tig0018533 | CDS | 41621 | 41775 | 41621 | ID=Msa1367650-mRNA-1:cds;Parent=Msa1367650-mRNA-1 |
| tig0018533 | CDS | 41868 | 41923 | 41868 | ID=Msa1367650-mRNA-1:cds;Parent=Msa1367650-mRNA-1 |
| tig0018533 | CDS | 42302 | 42353 | 42302 | ID=Msa1367650-mRNA-1:cds;Parent=Msa1367650-mRNA-1 |
| tig0018533 | CDS | 42446 | 42520 | 42446 | ID=Msa1367650-mRNA-1:cds;Parent=Msa1367650-mRNA-1 |
| tig0018533 | CDS | 43168 | 43224 | 43168 | ID=Msa1367650-mRNA-1:cds;Parent=Msa1367650-mRNA-1 |
| tig0018533 | CDS | 44072 | 44152 | 44072 | ID=Msa1367650-mRNA-1:cds;Parent=Msa1367650-mRNA-1 |
| tig0018533 | CDS | 44637 | 44702 | 44637 | ID=Msa1367650-mRNA-1:cds;Parent=Msa1367650-mRNA-1 |
| tig0018533 | CDS | 44818 | 44901 | 44818 | ID=Msa1367650-mRNA-1:cds;Parent=Msa1367650-mRNA-1 |
| tig0018533 | CDS | 45308 | 45355 | 45308 | ID=Msa1367650-mRNA-1:cds;Parent=Msa1367650-mRNA-1 |
| tig0018533 | CDS | 45456 | 45541 | 45456 | ID=Msa1367650-mRNA-1:cds;Parent=Msa1367650-mRNA-1 |
| tig0018533 | CDS | 46085 | 46145 | 46085 | ID=Msa1367650-mRNA-1:cds;Parent=Msa1367650-mRNA-1 |
| tig0018533 | CDS | 46312 | 46386 | 46312 | ID=Msa1367650-mRNA-1:cds;Parent=Msa1367650-mRNA-1 |
| tig0018533 | three_prime_UTR | 46387 | 46956 | 46387 | ID=Msa1367650-mRNA-1:three_prime_utr;Parent=Msa1367650-mRNA-1 |
| tig0018533 | three_prime_UTR | 47101 | 47233 | 47101 | ID=Msa1367650-mRNA-1:three_prime_utr;Parent=Msa1367650-mRNA-1 |
| tig0018533 | three_prime_UTR | 47255 | 47321 | 47255 | ID=Msa1367650-mRNA-1:three_prime_utr;Parent=Msa1367650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
