Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866030 | XP_039690717.1 | 86.427 | 361 | 5 | 3 | 1 | 342 | 1 | 336 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866030 | sp|B5X582|TWIH_ARATH | 48.845 | 303 | 126 | 4 | 64 | 338 | 107 | 408 | 7.66e-87 | 278 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866030 | G7KFG5 | 86.517 | 356 | 4 | 3 | 6 | 342 | 1 | 331 | 0.0 | 614 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0866030 | Msa0866120 | 0.848733 | 5.077248e-60 | -8.615850e-47 |
| Msa0866030 | Msa1367650 | 0.899261 | 2.360758e-77 | -8.615850e-47 |
| Msa0866030 | Msa1399220 | 0.807945 | 3.944121e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866030 | MtrunA17_Chr5g0448701 | 85.757 | 337 | 4 | 3 | 1 | 318 | 1 | 312 | 0.0 | 574 |
| Msa0866030 | MtrunA17_Chr2g0293321 | 74.931 | 363 | 41 | 7 | 6 | 342 | 1 | 339 | 0.0 | 515 |
| Msa0866030 | MtrunA17_Chr2g0293211 | 47.339 | 357 | 150 | 7 | 16 | 338 | 45 | 397 | 1.49e-97 | 303 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866030 | AT1G30680.1 | 48.845 | 303 | 126 | 4 | 64 | 338 | 107 | 408 | 7.79e-88 | 278 |
| Msa0866030 | AT1G30660.2 | 49.505 | 303 | 123 | 5 | 64 | 338 | 26 | 326 | 1.59e-86 | 264 |
| Msa0866030 | AT1G30660.3 | 49.505 | 303 | 123 | 5 | 64 | 338 | 23 | 323 | 1.71e-86 | 264 |
| Msa0866030 | AT1G30660.1 | 49.505 | 303 | 123 | 5 | 64 | 338 | 33 | 333 | 2.19e-86 | 264 |
Find 130 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGCTTGTTGCTTACTTTA+AGG | 0.093113 | 5_4:+67417304 | Msa0866030:intron |
| GTTAAAGACAAGGTCCTTTA+TGG | 0.127809 | 5_4:+67418783 | Msa0866030:CDS |
| CGCCCCAAACCCAAAGGTTT+TGG | 0.223708 | 5_4:+67415594 | Msa0866030:CDS |
| CTTTGTTGATGCTTGTTTGT+AGG | 0.263948 | 5_4:-67420959 | None:intergenic |
| GAACAATGGAGAAAAGATTT+TGG | 0.263962 | 5_4:+67418267 | Msa0866030:CDS |
| GCACCAAAACCTTTGGGTTT+GGG | 0.271135 | 5_4:-67415597 | None:intergenic |
| TGCGATTCTCTACAAAATTA+AGG | 0.275139 | 5_4:-67420675 | None:intergenic |
| TTAAAATCTAAGCAACTATA+AGG | 0.287464 | 5_4:-67421449 | None:intergenic |
| AAGCTGAGTTCATCTTTCTT+TGG | 0.292938 | 5_4:-67420244 | None:intergenic |
| AAAGGAGTCTGGAGCTGATT+TGG | 0.295968 | 5_4:+67421245 | Msa0866030:three_prime_UTR |
| CTTTGTTGATGCTTGTTTGT+AGG | 0.313060 | 5_4:-67420897 | None:intergenic |
| GGCACCAAAACCTTTGGGTT+TGG | 0.313375 | 5_4:-67415598 | None:intergenic |
| GCCGTGCCAGGCTTCTGACT+TGG | 0.324363 | 5_4:-67421308 | None:intergenic |
| GTGTAAAGGTGGACAGTTAA+TGG | 0.331736 | 5_4:+67416007 | Msa0866030:intron |
| TGATTGTGCAAGAACAAGTT+TGG | 0.339930 | 5_4:+67421004 | Msa0866030:three_prime_UTR |
| CCAGACTTTCGTATGAAACT+TGG | 0.341498 | 5_4:+67421065 | Msa0866030:three_prime_UTR |
| ACCTAGTGTGCACAAGTATA+TGG | 0.342634 | 5_4:-67420506 | None:intergenic |
| AAGAGCTAGCACGGCGCCTT+GGG | 0.357506 | 5_4:+67419651 | Msa0866030:CDS |
| TTGGGGCGAGAAAAGTGATT+TGG | 0.360080 | 5_4:-67415579 | None:intergenic |
| CCGTGCCAGGCTTCTGACTT+GGG | 0.364382 | 5_4:-67421307 | None:intergenic |
| ATGAATGGCACCAAAACCTT+TGG | 0.365791 | 5_4:-67415604 | None:intergenic |
| GAAGAGCTAGCACGGCGCCT+TGG | 0.374758 | 5_4:+67419650 | Msa0866030:CDS |
| GCACGGCCGTGCCACCTCTC+TGG | 0.377554 | 5_4:+67421366 | Msa0866030:three_prime_UTR |
| CCTTACAGAATTTCTGCTTA+AGG | 0.380916 | 5_4:-67417348 | None:intergenic |
| ACCTTAGCACGGGCCGTGCC+AGG | 0.387451 | 5_4:-67421320 | None:intergenic |
| GTGAAGCCATGTGTCATCTA+AGG | 0.394200 | 5_4:-67420821 | None:intergenic |
| AACCCTAAGCTCTCCTCATC+AGG | 0.396006 | 5_4:-67416619 | None:intergenic |
| TACATGTGGTTGGGCTGGTC+AGG | 0.399429 | 5_4:+67416472 | Msa0866030:CDS |
| GTGGAACAGCAAAGCTTACT+TGG | 0.403923 | 5_4:+67419468 | Msa0866030:CDS |
| AAAACTACAACAGGGTAACT+TGG | 0.412068 | 5_4:-67421416 | None:intergenic |
| CTATTCGGTAAAACTACAAC+AGG | 0.417291 | 5_4:-67421425 | None:intergenic |
| ATAATATTTAGTCAAATGTA+AGG | 0.424827 | 5_4:+67420615 | Msa0866030:three_prime_UTR |
| AAGCAACTATAAGGGCTATT+CGG | 0.427438 | 5_4:-67421440 | None:intergenic |
| TGAATGGCACCAAAACCTTT+GGG | 0.435245 | 5_4:-67415603 | None:intergenic |
| AAACCTGATGAGGAGAGCTT+AGG | 0.440096 | 5_4:+67416616 | Msa0866030:CDS |
| ACCTTTCCTGGTGCACCATC+AGG | 0.440161 | 5_4:-67419021 | None:intergenic |
| GTATGAACAATTGTAACTCT+TGG | 0.443099 | 5_4:+67420570 | Msa0866030:three_prime_UTR |
| CACCAAAACCTTTGGGTTTG+GGG | 0.445536 | 5_4:-67415596 | None:intergenic |
| TTAGACAACTCTTGTTTGCC+TGG | 0.447652 | 5_4:+67415865 | Msa0866030:CDS |
| TTAGGTGGTTCGCATTATCC+TGG | 0.449392 | 5_4:+67419592 | Msa0866030:intron |
| AATAAATTTGATTGTGAACA+AGG | 0.453230 | 5_4:+67420871 | Msa0866030:three_prime_UTR |
| TTGACCTGGTGGATCATTAT+CGG | 0.454060 | 5_4:-67419618 | None:intergenic |
| CCAAGTTTCATACGAAAGTC+TGG | 0.459369 | 5_4:-67421065 | None:intergenic |
| AAACAAAATGGGTTGATTGT+TGG | 0.461337 | 5_4:+67418233 | Msa0866030:CDS |
| GTTGTAGTGAATTTGCAATC+TGG | 0.465654 | 5_4:+67416435 | Msa0866030:intron |
| AACCTGATGAGGAGAGCTTA+GGG | 0.465798 | 5_4:+67416617 | Msa0866030:CDS |
| TAATGTCGTCAAGTCCATAA+AGG | 0.465841 | 5_4:-67418797 | None:intergenic |
| TTCTGCAGATGACAAGGAAC+TGG | 0.466614 | 5_4:+67416588 | Msa0866030:CDS |
| TTTATCTAAGAATATGAAGA+TGG | 0.467426 | 5_4:+67420541 | Msa0866030:three_prime_UTR |
| AAGCTTTCACTTGAAGAGGC+TGG | 0.467773 | 5_4:+67418976 | Msa0866030:CDS |
| AATCAAACTTATTGTGTTGG+TGG | 0.468107 | 5_4:-67420924 | None:intergenic |
| AATCAAACTTATTGTGTTGG+TGG | 0.468107 | 5_4:-67420986 | None:intergenic |
| TGATAAGCTTTCACTTGAAG+AGG | 0.469616 | 5_4:+67418972 | Msa0866030:CDS |
| CACGGCGCCTTGGGCGAGAA+AGG | 0.471934 | 5_4:+67419660 | Msa0866030:CDS |
| TTAGGATCGCGTTTCAGCTA+TGG | 0.472657 | 5_4:-67420739 | None:intergenic |
| CGTGCCAGGCTTCTGACTTG+GGG | 0.480472 | 5_4:-67421306 | None:intergenic |
| GATAATGATAATAGGTTGAG+GGG | 0.483543 | 5_4:+67418944 | Msa0866030:intron |
| GCCTGGCACGGCCCGTGCTA+AGG | 0.485393 | 5_4:+67421319 | Msa0866030:three_prime_UTR |
| AGACCTACATGTGGTTGGGC+TGG | 0.487821 | 5_4:+67416467 | Msa0866030:CDS |
| TAAAATCTAAGCAACTATAA+GGG | 0.489808 | 5_4:-67421448 | None:intergenic |
| CAGCAAAGCTTACTTGGATA+AGG | 0.491598 | 5_4:+67419474 | Msa0866030:CDS |
| GTTGGAACCACTTGGTCCTA+AGG | 0.491634 | 5_4:+67416639 | Msa0866030:CDS |
| AGTAAGCTTTGCTGTTCCAC+AGG | 0.494786 | 5_4:-67419465 | None:intergenic |
| ATATATGATGGAAGAAGTCT+TGG | 0.495533 | 5_4:+67421214 | Msa0866030:three_prime_UTR |
| TGGAGCAAAAGAAAGGAGTC+TGG | 0.500477 | 5_4:+67421234 | Msa0866030:three_prime_UTR |
| TGGATACCTTTGGACAAAAG+AGG | 0.502264 | 5_4:-67415900 | None:intergenic |
| CCTTTGGACAAAAGAGGTTG+TGG | 0.510616 | 5_4:-67415894 | None:intergenic |
| GGCCTAGGTTCTCAAATACA+TGG | 0.513227 | 5_4:+67420445 | Msa0866030:intron |
| TGATAATGATAATAGGTTGA+GGG | 0.514143 | 5_4:+67418943 | Msa0866030:intron |
| ACATGTCAATTTGTCAGAGC+TGG | 0.514292 | 5_4:+67415537 | Msa0866030:CDS |
| AGCTTAGGGTTGGAACCACT+TGG | 0.515652 | 5_4:+67416631 | Msa0866030:CDS |
| AAGAATATGAAGATGGATGT+AGG | 0.516748 | 5_4:+67420548 | Msa0866030:three_prime_UTR |
| TTTCAGGAACGAATATATGA+TGG | 0.517370 | 5_4:+67421202 | Msa0866030:intron |
| ACAAAATTAAGGATCACAAT+GGG | 0.520225 | 5_4:-67420664 | None:intergenic |
| GTGGATCATTATCGGTAGCC+AGG | 0.524131 | 5_4:-67419610 | None:intergenic |
| CACAATCAAACTTATTGTGT+TGG | 0.524532 | 5_4:-67420927 | None:intergenic |
| CACAATCAAACTTATTGTGT+TGG | 0.524532 | 5_4:-67420989 | None:intergenic |
| AGTGGAGTACGTACCTTTGG+TGG | 0.527173 | 5_4:-67415636 | None:intergenic |
| AGTGTTCCTGATGGTGCACC+AGG | 0.529108 | 5_4:+67419015 | Msa0866030:CDS |
| CAGACTTTCGTATGAAACTT+GGG | 0.534819 | 5_4:+67421066 | Msa0866030:three_prime_UTR |
| TCCTGATGGTGCACCAGGAA+AGG | 0.537409 | 5_4:+67419020 | Msa0866030:CDS |
| CTTCTTCAAAGATGCAAATG+AGG | 0.541918 | 5_4:+67420264 | Msa0866030:CDS |
| GAAGTCTTGGAGCAAAAGAA+AGG | 0.544530 | 5_4:+67421227 | Msa0866030:three_prime_UTR |
| AAGCACAAAGTGGAACCTCT+TGG | 0.547568 | 5_4:+67415835 | Msa0866030:CDS |
| TAAAATATTGAAGCACAAAG+TGG | 0.551755 | 5_4:+67415825 | Msa0866030:CDS |
| GGGCCGTGCCAACCTTAGCA+CGG | 0.560602 | 5_4:-67421331 | None:intergenic |
| GGCCCGTGCTAAGGTTGGCA+CGG | 0.562700 | 5_4:+67421349 | Msa0866030:intron |
| TTGATATGCCAGTGTAAAGG+TGG | 0.562981 | 5_4:+67415996 | Msa0866030:intron |
| GCCATATACTTGTGCACACT+AGG | 0.563415 | 5_4:+67420505 | Msa0866030:CDS |
| TACGTACCTTTGGTGGAAAG+TGG | 0.563937 | 5_4:-67415629 | None:intergenic |
| CTTTAGCTGAAGAGCTAGCA+CGG | 0.564457 | 5_4:+67419642 | Msa0866030:CDS |
| TAGACAACTCTTGTTTGCCT+GGG | 0.566831 | 5_4:+67415866 | Msa0866030:CDS |
| GGCCGTGCCAACCTTAGCAC+GGG | 0.567791 | 5_4:-67421330 | None:intergenic |
| GTTGTTGCAACTTTAATCGA+CGG | 0.568479 | 5_4:+67420708 | Msa0866030:three_prime_UTR |
| TCATTACCACTTTCCACCAA+AGG | 0.570913 | 5_4:+67415623 | Msa0866030:CDS |
| AAGAGGTTGTGGTAGTTCCC+AGG | 0.571323 | 5_4:-67415883 | None:intergenic |
| ATCGCGTTTCAGCTATGGCA+TGG | 0.578515 | 5_4:-67420734 | None:intergenic |
| TACAAAATTAAGGATCACAA+TGG | 0.578794 | 5_4:-67420665 | None:intergenic |
| AAACTACAACAGGGTAACTT+GGG | 0.579060 | 5_4:-67421415 | None:intergenic |
| TGATGAGGAGAGCTTAGGGT+TGG | 0.580112 | 5_4:+67416621 | Msa0866030:CDS |
| TGAATGACCTTTCTCGCCCA+AGG | 0.584678 | 5_4:-67419667 | None:intergenic |
| TCAGGTGTTGGCAAGTACGC+TGG | 0.585250 | 5_4:+67420221 | Msa0866030:intron |
| TCAGCTAAAGCTTGACCTGG+TGG | 0.586602 | 5_4:-67419629 | None:intergenic |
| CCCAAGTCAGAAGCCTGGCA+CGG | 0.589958 | 5_4:+67421307 | Msa0866030:three_prime_UTR |
| GTGCCAGGCTTCTGACTTGG+GGG | 0.599410 | 5_4:-67421305 | None:intergenic |
| GAGAAAAGTGATTTGGTGAG+AGG | 0.600510 | 5_4:-67415572 | None:intergenic |
| ATAGGTTTCTGCAGATGACA+AGG | 0.602576 | 5_4:+67416582 | Msa0866030:intron |
| TCTTCAGCTAAAGCTTGACC+TGG | 0.612094 | 5_4:-67419632 | None:intergenic |
| TGTCAATTTGTCAGAGCTGG+TGG | 0.614230 | 5_4:+67415540 | Msa0866030:CDS |
| AAGGTGGACAGTTAATGGAG+AGG | 0.614763 | 5_4:+67416012 | Msa0866030:CDS |
| GTATGAAACTTGGGCAACTG+TGG | 0.615289 | 5_4:+67421075 | Msa0866030:three_prime_UTR |
| TGAAGCCATGTGTCATCTAA+GGG | 0.625157 | 5_4:-67420820 | None:intergenic |
| TGGTGGAAAGTGGTAATGAA+TGG | 0.627860 | 5_4:-67415619 | None:intergenic |
| GCAAAAGTCATCCAGAGAGG+TGG | 0.631158 | 5_4:-67421377 | None:intergenic |
| AGTCATCCAGAGAGGTGGCA+CGG | 0.631316 | 5_4:-67421372 | None:intergenic |
| TTGAATACCTTAGGACCAAG+TGG | 0.632809 | 5_4:-67416646 | None:intergenic |
| TGACCAGCCCAACCACATGT+AGG | 0.639589 | 5_4:-67416470 | None:intergenic |
| TGGTTGCAAGTACAGAACAA+TGG | 0.639955 | 5_4:+67418253 | Msa0866030:CDS |
| ATAATGATAATAGGTTGAGG+GGG | 0.644644 | 5_4:+67418945 | Msa0866030:intron |
| GCCTAGGTTCTCAAATACAT+GGG | 0.646477 | 5_4:+67420446 | Msa0866030:intron |
| AATTGTGTTAGTGTTCCTGA+TGG | 0.656404 | 5_4:+67419006 | Msa0866030:CDS |
| ACTGGACAATAAACCTGATG+AGG | 0.661447 | 5_4:+67416606 | Msa0866030:CDS |
| TTGTCTAAGCTGATACCAAG+AGG | 0.662148 | 5_4:-67415850 | None:intergenic |
| TAGAGAATCGCAGTGAAATG+TGG | 0.663952 | 5_4:+67420686 | Msa0866030:three_prime_UTR |
| ATACTGCATATCAATACCTG+TGG | 0.667697 | 5_4:+67419449 | Msa0866030:CDS |
| GCTACCGATAATGATCCACC+AGG | 0.671318 | 5_4:+67419614 | Msa0866030:CDS |
| GTAGTGAATTTGCAATCTGG+AGG | 0.685376 | 5_4:+67416438 | Msa0866030:intron |
| ACAGGGAAAAGTTAAAGACA+AGG | 0.695307 | 5_4:+67418773 | Msa0866030:intron |
| GCAGCAAAAGTCATCCAGAG+AGG | 0.709265 | 5_4:-67421380 | None:intergenic |
| TATTCGGTAAAACTACAACA+GGG | 0.762414 | 5_4:-67421424 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAAAAATAGTATAA+TGG | - | chr5_4:67417049-67417068 | None:intergenic | 10.0% |
| !!! | TTCTAAAAAAAATAGATTTT+GGG | - | chr5_4:67417825-67417844 | None:intergenic | 10.0% |
| !!! | TTTCTAAAAAAAATAGATTT+TGG | - | chr5_4:67417826-67417845 | None:intergenic | 10.0% |
| !! | TAAAATAATTTGAATACCTT+AGG | - | chr5_4:67416658-67416677 | None:intergenic | 15.0% |
| !!! | TAATTTTCATTAACAATTTG+AGG | - | chr5_4:67416946-67416965 | None:intergenic | 15.0% |
| !! | GAAAATTATCAAAATAATAG+AGG | + | chr5_4:67416958-67416977 | Msa0866030:intron | 15.0% |
| !! | ACATTTATATTCATTTAAGA+TGG | - | chr5_4:67417175-67417194 | None:intergenic | 15.0% |
| !! | CTTAAATGAATATAAATGTA+TGG | + | chr5_4:67417176-67417195 | Msa0866030:intron | 15.0% |
| !! | AAAAATGTAAAACAAGATAT+CGG | - | chr5_4:67417418-67417437 | None:intergenic | 15.0% |
| !!! | ATCTTGTTTTACATTTTTTT+TGG | + | chr5_4:67417420-67417439 | Msa0866030:intron | 15.0% |
| !!! | TATATTTTTCCAAAATCATT+AGG | + | chr5_4:67417789-67417808 | Msa0866030:intron | 15.0% |
| !! | ATTTATAAAAAACACTAGTA+AGG | - | chr5_4:67417946-67417965 | None:intergenic | 15.0% |
| !! | TTGAATCAATTATGTTAATT+AGG | - | chr5_4:67418465-67418484 | None:intergenic | 15.0% |
| !!! | ATTCAAATGCTAAATTTTTT+TGG | + | chr5_4:67418747-67418766 | Msa0866030:intron | 15.0% |
| !!! | TATAGTTTGATAATGATAAT+AGG | + | chr5_4:67418936-67418955 | Msa0866030:intron | 15.0% |
| !! | AAATATATAATTGAAAGAGA+AGG | - | chr5_4:67419522-67419541 | None:intergenic | 15.0% |
| !!! | TTTCTTTATTTTTTAATGTC+AGG | + | chr5_4:67420203-67420222 | Msa0866030:intron | 15.0% |
| !! | ATATTCTTAGATAAAAATCA+TGG | - | chr5_4:67420536-67420555 | None:intergenic | 15.0% |
| !! | ATAATATTTAGTCAAATGTA+AGG | + | chr5_4:67420615-67420634 | Msa0866030:three_prime_UTR | 15.0% |
| !!! | AATTGCATATTTTATATTTC+AGG | + | chr5_4:67421186-67421205 | Msa0866030:intron | 15.0% |
| !!! | TTTAAATTGTTTTGTGAAGA+TGG | + | chr5_4:67415730-67415749 | Msa0866030:intron | 20.0% |
| !! | TCTATAAAATTACTTATCCA+GGG | + | chr5_4:67416298-67416317 | Msa0866030:intron | 20.0% |
| !! | ACACATATAAATAGAGTAAA+TGG | - | chr5_4:67416399-67416418 | None:intergenic | 20.0% |
| !!! | TTATTTTATTCAGTTTCAGA+AGG | + | chr5_4:67416670-67416689 | Msa0866030:intron | 20.0% |
| !!! | TTATTCCAAAAGTCTTATTT+AGG | + | chr5_4:67416752-67416771 | Msa0866030:intron | 20.0% |
| !!! | TGATTACTATTGATTATTCT+CGG | + | chr5_4:67416791-67416810 | Msa0866030:intron | 20.0% |
| !! | AGATAAAATGCAACTAATAA+AGG | - | chr5_4:67416867-67416886 | None:intergenic | 20.0% |
| !!! | ATTTTATCTGAAGTAAACAT+AGG | + | chr5_4:67416878-67416897 | Msa0866030:intron | 20.0% |
| !!! | TTTTATCTGAAGTAAACATA+GGG | + | chr5_4:67416879-67416898 | Msa0866030:intron | 20.0% |
| !!! | TCACTTGAAATTTTGAAATA+AGG | + | chr5_4:67416983-67417002 | Msa0866030:intron | 20.0% |
| !! | TGAAAGAAATAAAGGAAAAT+GGG | - | chr5_4:67417616-67417635 | None:intergenic | 20.0% |
| !!! | GAACATTTTAAAAGTATATG+AGG | - | chr5_4:67417699-67417718 | None:intergenic | 20.0% |
| !! | TAAATCCTAACGTATAAAAA+TGG | - | chr5_4:67418009-67418028 | None:intergenic | 20.0% |
| !! | GACAACATTATAAAAAAGTA+AGG | - | chr5_4:67418033-67418052 | None:intergenic | 20.0% |
| !!! | CTTTTACCTATAAACAAAAT+GGG | + | chr5_4:67418222-67418241 | Msa0866030:CDS | 20.0% |
| !! | TAGCATTTGAATTAAAATCA+GGG | - | chr5_4:67418739-67418758 | None:intergenic | 20.0% |
| !! | TTAGCATTTGAATTAAAATC+AGG | - | chr5_4:67418740-67418759 | None:intergenic | 20.0% |
| !! | AAATGAAGATAACTTCAAAA+AGG | + | chr5_4:67418897-67418916 | Msa0866030:intron | 20.0% |
| !! | AATGAAGATAACTTCAAAAA+GGG | + | chr5_4:67418898-67418917 | Msa0866030:intron | 20.0% |
| !!! | TTGAAACATGTATTTTAGAT+GGG | - | chr5_4:67419370-67419389 | None:intergenic | 20.0% |
| !!! | TTATATATTTCTAGATCAGA+AGG | + | chr5_4:67419532-67419551 | Msa0866030:intron | 20.0% |
| !!! | TATATATTTCTAGATCAGAA+GGG | + | chr5_4:67419533-67419552 | Msa0866030:intron | 20.0% |
| !!! | TATTTTTCATGTTCATAGTA+AGG | + | chr5_4:67419700-67419719 | Msa0866030:intron | 20.0% |
| !! | TTCATTTATTTAGTTGGATA+TGG | - | chr5_4:67420123-67420142 | None:intergenic | 20.0% |
| !! | TACATATAATCATTCAATTG+TGG | + | chr5_4:67420416-67420435 | Msa0866030:intron | 20.0% |
| !! | TTTATCTAAGAATATGAAGA+TGG | + | chr5_4:67420541-67420560 | Msa0866030:three_prime_UTR | 20.0% |
| !! | AATAAATTTGATTGTGAACA+AGG | + | chr5_4:67420871-67420890 | Msa0866030:three_prime_UTR | 20.0% |
| ! | TAAAATATTGAAGCACAAAG+TGG | + | chr5_4:67415825-67415844 | Msa0866030:CDS | 25.0% |
| ! | GTCTATAAAATTACTTATCC+AGG | + | chr5_4:67416297-67416316 | Msa0866030:intron | 25.0% |
| !!! | AGTTTGATTTGATACATTCA+AGG | + | chr5_4:67416332-67416351 | Msa0866030:intron | 25.0% |
| !!! | ACTCATTTTGGTTCTTAAAT+GGG | - | chr5_4:67416371-67416390 | None:intergenic | 25.0% |
| !!! | TACTCATTTTGGTTCTTAAA+TGG | - | chr5_4:67416372-67416391 | None:intergenic | 25.0% |
| !! | TAAATGGTCATTACTCATTT+TGG | - | chr5_4:67416383-67416402 | None:intergenic | 25.0% |
| ! | TCAAACATAGAACTTCATTA+AGG | + | chr5_4:67416529-67416548 | Msa0866030:intron | 25.0% |
| !! | TTACATTTTACTTGATTACG+TGG | + | chr5_4:67416557-67416576 | Msa0866030:intron | 25.0% |
| ! | GACAATTTATGACAAAAAGA+AGG | - | chr5_4:67416731-67416750 | None:intergenic | 25.0% |
| !! | AAAGACCTAAATAAGACTTT+TGG | - | chr5_4:67416760-67416779 | None:intergenic | 25.0% |
| !!! | GAAATTTTGAAATAAGGTTC+AGG | + | chr5_4:67416989-67417008 | Msa0866030:intron | 25.0% |
| ! | GTGAAAGAAATAAAGGAAAA+TGG | - | chr5_4:67417617-67417636 | None:intergenic | 25.0% |
| !!! | AAATGTTCTAAGACACAATA+TGG | + | chr5_4:67417711-67417730 | Msa0866030:intron | 25.0% |
| !! | TAAGACACAATATGGATTTT+AGG | + | chr5_4:67417719-67417738 | Msa0866030:intron | 25.0% |
| !! | AAGACACAATATGGATTTTA+GGG | + | chr5_4:67417720-67417739 | Msa0866030:intron | 25.0% |
| !! | ATGCAATTGTCACTTAAAAA+TGG | - | chr5_4:67417761-67417780 | None:intergenic | 25.0% |
| !! | AAAGCTAATCCTAATGATTT+TGG | - | chr5_4:67417801-67417820 | None:intergenic | 25.0% |
| ! | ATAAAAAACACTAGTAAGGA+GGG | - | chr5_4:67417942-67417961 | None:intergenic | 25.0% |
| ! | TATAAAAAACACTAGTAAGG+AGG | - | chr5_4:67417943-67417962 | None:intergenic | 25.0% |
| !!! | TTTGACCATTTTTATACGTT+AGG | + | chr5_4:67418001-67418020 | Msa0866030:intron | 25.0% |
| !! | TTGTAAATATTTTATGTGCG+TGG | + | chr5_4:67418125-67418144 | Msa0866030:intron | 25.0% |
| ! | AAGTTAAGAACTAACTAGTT+AGG | - | chr5_4:67418166-67418185 | None:intergenic | 25.0% |
| !! | GCTTTTACCTATAAACAAAA+TGG | + | chr5_4:67418221-67418240 | Msa0866030:CDS | 25.0% |
| !!! | AATCAACCCATTTTGTTTAT+AGG | - | chr5_4:67418231-67418250 | None:intergenic | 25.0% |
| ! | GTATAATTTCATAACCAGTT+AGG | + | chr5_4:67418390-67418409 | Msa0866030:intron | 25.0% |
| !!! | ATTTTTTTGGAGGATTAATG+TGG | + | chr5_4:67418599-67418618 | Msa0866030:intron | 25.0% |
| ! | CATATGAAAATGTATATGCT+TGG | - | chr5_4:67418665-67418684 | None:intergenic | 25.0% |
| !!! | CTAAATTTTTTTGGTGTACA+GGG | + | chr5_4:67418756-67418775 | Msa0866030:intron | 25.0% |
| ! | ATTTCCAACAAAAGAAGATA+TGG | - | chr5_4:67418873-67418892 | None:intergenic | 25.0% |
| !!! | TTGATAATGATAATAGGTTG+AGG | + | chr5_4:67418942-67418961 | Msa0866030:intron | 25.0% |
| !! | TGATAATGATAATAGGTTGA+GGG | + | chr5_4:67418943-67418962 | Msa0866030:intron | 25.0% |
| !! | ATAACACAAACCTTTTCTAT+TGG | - | chr5_4:67419066-67419085 | None:intergenic | 25.0% |
| ! | CATCACACTAAATATTTACT+AGG | - | chr5_4:67419285-67419304 | None:intergenic | 25.0% |
| !!! | GTTGAAACATGTATTTTAGA+TGG | - | chr5_4:67419371-67419390 | None:intergenic | 25.0% |
| ! | GATTGAAGAGATAAAACAAT+TGG | - | chr5_4:67419393-67419412 | None:intergenic | 25.0% |
| ! | GAACATGAAAAATAAATGAC+AGG | - | chr5_4:67419694-67419713 | None:intergenic | 25.0% |
| !!! | TCTCAACCATTGATTTAAAT+TGG | + | chr5_4:67419962-67419981 | Msa0866030:intron | 25.0% |
| !!! | AACCATTGATTTAAATTGGA+TGG | + | chr5_4:67419966-67419985 | Msa0866030:intron | 25.0% |
| ! | AACCATCCAATTTAAATCAA+TGG | - | chr5_4:67419971-67419990 | None:intergenic | 25.0% |
| ! | ATGGAAATATTTGCTCTATA+TGG | - | chr5_4:67420104-67420123 | None:intergenic | 25.0% |
| ! | TGTGTCTTCATTTATTTAGT+TGG | - | chr5_4:67420129-67420148 | None:intergenic | 25.0% |
| !!! | TATTTTTTAATGTCAGGTGT+TGG | + | chr5_4:67420209-67420228 | Msa0866030:intron | 25.0% |
| !! | TCTCTATATTTGATTCCTTT+TGG | + | chr5_4:67420309-67420328 | Msa0866030:intron | 25.0% |
| !! | CTAAGAAAATGAACTTTTCA+TGG | + | chr5_4:67420337-67420356 | Msa0866030:intron | 25.0% |
| ! | AATCATTCAATTGTGGTTAA+TGG | + | chr5_4:67420423-67420442 | Msa0866030:intron | 25.0% |
| ! | ATCATTCAATTGTGGTTAAT+GGG | + | chr5_4:67420424-67420443 | Msa0866030:intron | 25.0% |
| ! | ACAAAATTAAGGATCACAAT+GGG | - | chr5_4:67420667-67420686 | None:intergenic | 25.0% |
| ! | TACAAAATTAAGGATCACAA+TGG | - | chr5_4:67420668-67420687 | None:intergenic | 25.0% |
| ! | GTTAACTGAAACAAAAAACA+TGG | + | chr5_4:67421038-67421057 | Msa0866030:three_prime_UTR | 25.0% |
| !! | ATTGTTTTGTGAAGATGGTT+TGG | + | chr5_4:67415735-67415754 | Msa0866030:intron | 30.0% |
| ACCAAATACATTGAAAAGAC+TGG | - | chr5_4:67415969-67415988 | None:intergenic | 30.0% | |
| ! | TTTTTGATATGCCAGTGTAA+AGG | + | chr5_4:67415993-67416012 | Msa0866030:intron | 30.0% |
| ! | TCTTTTCACATTATCACTGA+TGG | + | chr5_4:67416041-67416060 | Msa0866030:CDS | 30.0% |
| ! | CTTTTCACATTATCACTGAT+GGG | + | chr5_4:67416042-67416061 | Msa0866030:CDS | 30.0% |
| !!! | TCTTCAACTTGTTTGTTTTG+AGG | + | chr5_4:67416071-67416090 | Msa0866030:intron | 30.0% |
| !!! | ACTTGTTTGTTTTGAGGTTT+TGG | + | chr5_4:67416077-67416096 | Msa0866030:intron | 30.0% |
| !!! | TTTTGAGGTTTTGGTGATAT+TGG | + | chr5_4:67416086-67416105 | Msa0866030:intron | 30.0% |
| AACAGAAGACACAATATTTG+AGG | - | chr5_4:67416235-67416254 | None:intergenic | 30.0% | |
| TTACTTGATTACGTGGTTAT+AGG | + | chr5_4:67416564-67416583 | Msa0866030:intron | 30.0% | |
| ATAAGTATGGTATGTTCAAG+TGG | + | chr5_4:67417128-67417147 | Msa0866030:intron | 30.0% | |
| TAAGTATGGTATGTTCAAGT+GGG | + | chr5_4:67417129-67417148 | Msa0866030:intron | 30.0% | |
| CTAGTCAGATTATTTGCTTA+TGG | + | chr5_4:67417264-67417283 | Msa0866030:intron | 30.0% | |
| AACAAGCTAAAATAGGGAAA+AGG | - | chr5_4:67417294-67417313 | None:intergenic | 30.0% | |
| GTAAGCAACAAGCTAAAATA+GGG | - | chr5_4:67417300-67417319 | None:intergenic | 30.0% | |
| AGTAAGCAACAAGCTAAAAT+AGG | - | chr5_4:67417301-67417320 | None:intergenic | 30.0% | |
| !! | TTAGCTTGTTGCTTACTTTA+AGG | + | chr5_4:67417304-67417323 | Msa0866030:intron | 30.0% |
| AATGTAAAACAAGATATCGG+AGG | - | chr5_4:67417415-67417434 | None:intergenic | 30.0% | |
| GGGGAACTTAAAAATTGTAT+TGG | - | chr5_4:67417538-67417557 | None:intergenic | 30.0% | |
| ATAGAAATCTCTCCTCATTT+GGG | - | chr5_4:67417559-67417578 | None:intergenic | 30.0% | |
| AATAGAAATCTCTCCTCATT+TGG | - | chr5_4:67417560-67417579 | None:intergenic | 30.0% | |
| AGAAATAAAGGAAAATGGGA+GGG | - | chr5_4:67417612-67417631 | None:intergenic | 30.0% | |
| AAGAAATAAAGGAAAATGGG+AGG | - | chr5_4:67417613-67417632 | None:intergenic | 30.0% | |
| TCAGCAAGTGAAAGAAATAA+AGG | - | chr5_4:67417624-67417643 | None:intergenic | 30.0% | |
| !! | TTTTGACTAATAGTTCTCCT+TGG | + | chr5_4:67417872-67417891 | Msa0866030:intron | 30.0% |
| ATTCCAATAGTAAGAGATAG+AGG | - | chr5_4:67417902-67417921 | None:intergenic | 30.0% | |
| TACACTTACAGGATATGATT+AGG | - | chr5_4:67418059-67418078 | None:intergenic | 30.0% | |
| !! | AAACAAAATGGGTTGATTGT+TGG | + | chr5_4:67418233-67418252 | Msa0866030:CDS | 30.0% |
| ! | GAACAATGGAGAAAAGATTT+TGG | + | chr5_4:67418267-67418286 | Msa0866030:CDS | 30.0% |
| !! | CAAATTTTAACATGCAAGCA+TGG | - | chr5_4:67418315-67418334 | None:intergenic | 30.0% |
| TCATTAATGCCACACAATAA+AGG | - | chr5_4:67418425-67418444 | None:intergenic | 30.0% | |
| !!! | GAGACGGAAAAGAATTTTTT+TGG | + | chr5_4:67418586-67418605 | Msa0866030:intron | 30.0% |
| !!! | ACGGAAAAGAATTTTTTTGG+AGG | + | chr5_4:67418589-67418608 | Msa0866030:intron | 30.0% |
| !!! | GCTAAATTTTTTTGGTGTAC+AGG | + | chr5_4:67418755-67418774 | Msa0866030:intron | 30.0% |
| CAACAAAAGAAGATATGGAT+GGG | - | chr5_4:67418868-67418887 | None:intergenic | 30.0% | |
| ! | GATAATGATAATAGGTTGAG+GGG | + | chr5_4:67418944-67418963 | Msa0866030:intron | 30.0% |
| ! | ATAATGATAATAGGTTGAGG+GGG | + | chr5_4:67418945-67418964 | Msa0866030:intron | 30.0% |
| !! | CTTCATAGATTCCACTTTTA+AGG | + | chr5_4:67419259-67419278 | Msa0866030:intron | 30.0% |
| TATTTACTAGGCCTTAAAAG+TGG | - | chr5_4:67419273-67419292 | None:intergenic | 30.0% | |
| TACTGATGTTTGCATCATTA+AGG | - | chr5_4:67419308-67419327 | None:intergenic | 30.0% | |
| GAAGGGACAACTTATTAATT+TGG | + | chr5_4:67419550-67419569 | Msa0866030:intron | 30.0% | |
| TTGCATTCTCTTGAAATATC+TGG | + | chr5_4:67420078-67420097 | Msa0866030:intron | 30.0% | |
| ! | ATTTTCTTAGAAGCTCCAAA+AGG | - | chr5_4:67420327-67420346 | None:intergenic | 30.0% |
| AAGAATATGAAGATGGATGT+AGG | + | chr5_4:67420548-67420567 | Msa0866030:three_prime_UTR | 30.0% | |
| GTATGAACAATTGTAACTCT+TGG | + | chr5_4:67420570-67420589 | Msa0866030:three_prime_UTR | 30.0% | |
| TGCGATTCTCTACAAAATTA+AGG | - | chr5_4:67420678-67420697 | None:intergenic | 30.0% | |
| ! | ACGTTTTCTATCAGCTATTT+AGG | - | chr5_4:67420760-67420779 | None:intergenic | 30.0% |
| AATCAAACTTATTGTGTTGG+TGG | - | chr5_4:67420927-67420946 | None:intergenic | 30.0% | |
| CACAATCAAACTTATTGTGT+TGG | - | chr5_4:67420930-67420949 | None:intergenic | 30.0% | |
| AATCAAACTTATTGTGTTGG+TGG | - | chr5_4:67420927-67420946 | None:intergenic | 30.0% | |
| CACAATCAAACTTATTGTGT+TGG | - | chr5_4:67420930-67420949 | None:intergenic | 30.0% | |
| TTTCAGGAACGAATATATGA+TGG | + | chr5_4:67421202-67421221 | Msa0866030:intron | 30.0% | |
| ! | ATATATGATGGAAGAAGTCT+TGG | + | chr5_4:67421214-67421233 | Msa0866030:three_prime_UTR | 30.0% |
| TATTCGGTAAAACTACAACA+GGG | - | chr5_4:67421427-67421446 | None:intergenic | 30.0% | |
| CACTGTTGAATTTCTGATCT+GGG | + | chr5_4:67415655-67415674 | Msa0866030:intron | 35.0% | |
| TCTCTCTACTCAACCAAAAT+GGG | + | chr5_4:67415681-67415700 | Msa0866030:intron | 35.0% | |
| ! | GAAAACTACATGACCCATTT+TGG | - | chr5_4:67415697-67415716 | None:intergenic | 35.0% |
| ! | GCCAGTCTTTTCAATGTATT+TGG | + | chr5_4:67415965-67415984 | Msa0866030:intron | 35.0% |
| !! | AGGTTTTGGTGATATTGGTA+TGG | + | chr5_4:67416091-67416110 | Msa0866030:intron | 35.0% |
| GACATATTCAAGGATCGAAA+TGG | - | chr5_4:67416133-67416152 | None:intergenic | 35.0% | |
| ! | GATACACTTGGGGATATTTT+TGG | - | chr5_4:67416193-67416212 | None:intergenic | 35.0% |
| ACAAGCAAAAGATACACTTG+GGG | - | chr5_4:67416203-67416222 | None:intergenic | 35.0% | |
| GACAAGCAAAAGATACACTT+GGG | - | chr5_4:67416204-67416223 | None:intergenic | 35.0% | |
| TGACAAGCAAAAGATACACT+TGG | - | chr5_4:67416205-67416224 | None:intergenic | 35.0% | |
| GTGTCTTCTGTTAGTTAGTT+TGG | + | chr5_4:67416243-67416262 | Msa0866030:intron | 35.0% | |
| TTATAGACCATGCTGACAAT+TGG | - | chr5_4:67416285-67416304 | None:intergenic | 35.0% | |
| CAAACTTTCAAAAACATCCC+TGG | - | chr5_4:67416318-67416337 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTCTTAAATGGGTG+AGG | - | chr5_4:67416366-67416385 | None:intergenic | 35.0% |
| GTTGTAGTGAATTTGCAATC+TGG | + | chr5_4:67416435-67416454 | Msa0866030:intron | 35.0% | |
| ! | TTTTAGACCTACATGTGGTT+GGG | + | chr5_4:67416463-67416482 | Msa0866030:CDS | 35.0% |
| GAAGTTCTATGTTTGAGAAC+AGG | - | chr5_4:67416525-67416544 | None:intergenic | 35.0% | |
| !! | ACTGCCAATTTTTCAGAATG+AGG | + | chr5_4:67416700-67416719 | Msa0866030:intron | 35.0% |
| ! | GCTACCTCATTCTGAAAAAT+TGG | - | chr5_4:67416707-67416726 | None:intergenic | 35.0% |
| !! | TGTGAGTTATGAGTATTGAG+TGG | + | chr5_4:67416837-67416856 | Msa0866030:intron | 35.0% |
| AATACATTGCAGTAGTAGTG+TGG | + | chr5_4:67417095-67417114 | Msa0866030:intron | 35.0% | |
| !! | TGGTCAATGGTTGATAAGTA+TGG | + | chr5_4:67417115-67417134 | Msa0866030:intron | 35.0% |
| GGCAATGTATTAACTCAACA+TGG | - | chr5_4:67417233-67417252 | None:intergenic | 35.0% | |
| !! | GTTAATACATTGCCACTTTC+AGG | + | chr5_4:67417239-67417258 | Msa0866030:intron | 35.0% |
| CCTTACAGAATTTCTGCTTA+AGG | - | chr5_4:67417351-67417370 | None:intergenic | 35.0% | |
| CCTTAAGCAGAAATTCTGTA+AGG | + | chr5_4:67417348-67417367 | Msa0866030:intron | 35.0% | |
| AAATTCTGTAAGGCAACTCT+CGG | + | chr5_4:67417358-67417377 | Msa0866030:intron | 35.0% | |
| !!! | GGACGAAAAGGTATTTTCAA+TGG | + | chr5_4:67417379-67417398 | Msa0866030:intron | 35.0% |
| !!! | TTTTTAAGTTCCCCCAAATG+AGG | + | chr5_4:67417544-67417563 | Msa0866030:intron | 35.0% |
| TAGAAATCTCTCCTCATTTG+GGG | - | chr5_4:67417558-67417577 | None:intergenic | 35.0% | |
| GAAATAAAGGAAAATGGGAG+GGG | - | chr5_4:67417611-67417630 | None:intergenic | 35.0% | |
| !! | ACTTAAGCTTTGTTTGCAAG+GGG | - | chr5_4:67417671-67417690 | None:intergenic | 35.0% |
| !! | CACTTAAGCTTTGTTTGCAA+GGG | - | chr5_4:67417672-67417691 | None:intergenic | 35.0% |
| !! | ACACTTAAGCTTTGTTTGCA+AGG | - | chr5_4:67417673-67417692 | None:intergenic | 35.0% |
| CTTCCTCTATCTCTTACTAT+TGG | + | chr5_4:67417896-67417915 | Msa0866030:intron | 35.0% | |
| AAATGGTCAAATCTCGTCTT+AGG | - | chr5_4:67417992-67418011 | None:intergenic | 35.0% | |
| ATAGCATTGCATACACTTAC+AGG | - | chr5_4:67418070-67418089 | None:intergenic | 35.0% | |
| !! | AATGGAGAAAAGATTTTGGC+AGG | + | chr5_4:67418271-67418290 | Msa0866030:CDS | 35.0% |
| AATTTCATAACCAGTTAGGC+AGG | + | chr5_4:67418394-67418413 | Msa0866030:intron | 35.0% | |
| TGATGACTATACGTTAGAGA+CGG | + | chr5_4:67418570-67418589 | Msa0866030:intron | 35.0% | |
| TAATTGGTCCTCCAAATATC+AGG | - | chr5_4:67418631-67418650 | None:intergenic | 35.0% | |
| ATATTTGGAGGACCAATTAG+AGG | + | chr5_4:67418632-67418651 | Msa0866030:intron | 35.0% | |
| TATTTGGAGGACCAATTAGA+GGG | + | chr5_4:67418633-67418652 | Msa0866030:intron | 35.0% | |
| ACAGGGAAAAGTTAAAGACA+AGG | + | chr5_4:67418773-67418792 | Msa0866030:intron | 35.0% | |
| GTTAAAGACAAGGTCCTTTA+TGG | + | chr5_4:67418783-67418802 | Msa0866030:CDS | 35.0% | |
| TAATGTCGTCAAGTCCATAA+AGG | - | chr5_4:67418800-67418819 | None:intergenic | 35.0% | |
| TGGATGGGAAAATAGGTTTA+GGG | - | chr5_4:67418853-67418872 | None:intergenic | 35.0% | |
| ATGGATGGGAAAATAGGTTT+AGG | - | chr5_4:67418854-67418873 | None:intergenic | 35.0% | |
| GAAGATATGGATGGGAAAAT+AGG | - | chr5_4:67418860-67418879 | None:intergenic | 35.0% | |
| CCAACAAAAGAAGATATGGA+TGG | - | chr5_4:67418869-67418888 | None:intergenic | 35.0% | |
| ! | CCATCCATATCTTCTTTTGT+TGG | + | chr5_4:67418866-67418885 | Msa0866030:intron | 35.0% |
| TGATAAGCTTTCACTTGAAG+AGG | + | chr5_4:67418972-67418991 | Msa0866030:CDS | 35.0% | |
| AATTGTGTTAGTGTTCCTGA+TGG | + | chr5_4:67419006-67419025 | Msa0866030:CDS | 35.0% | |
| !! | TCTTTTGAAGATACCTTTCC+TGG | - | chr5_4:67419036-67419055 | None:intergenic | 35.0% |
| ! | ACACAAACCTTTTCTATTGG+TGG | - | chr5_4:67419063-67419082 | None:intergenic | 35.0% |
| ATGCTTGTCTTTATGAAGTC+AGG | + | chr5_4:67419426-67419445 | Msa0866030:intron | 35.0% | |
| ATACTGCATATCAATACCTG+TGG | + | chr5_4:67419449-67419468 | Msa0866030:CDS | 35.0% | |
| ! | TTCCTTTCTCCCATTCTTTT+AGG | + | chr5_4:67419574-67419593 | Msa0866030:intron | 35.0% |
| TTGAGGTGCAATTAATCGTT+GGG | - | chr5_4:67419822-67419841 | None:intergenic | 35.0% | |
| AAGCTGAGTTCATCTTTCTT+TGG | - | chr5_4:67420247-67420266 | None:intergenic | 35.0% | |
| CTTCTTCAAAGATGCAAATG+AGG | + | chr5_4:67420264-67420283 | Msa0866030:CDS | 35.0% | |
| ATGCAAATGAGGTATAACTC+AGG | + | chr5_4:67420275-67420294 | Msa0866030:intron | 35.0% | |
| ! | AAGGTTTTTAATAGCAGTCG+TGG | + | chr5_4:67420634-67420653 | Msa0866030:three_prime_UTR | 35.0% |
| GTTGTTGCAACTTTAATCGA+CGG | + | chr5_4:67420708-67420727 | Msa0866030:three_prime_UTR | 35.0% | |
| AAAAACCCTTAGATGACACA+TGG | + | chr5_4:67420815-67420834 | Msa0866030:three_prime_UTR | 35.0% | |
| CTTTGTTGATGCTTGTTTGT+AGG | - | chr5_4:67420900-67420919 | None:intergenic | 35.0% | |
| CTTTGTTGATGCTTGTTTGT+AGG | - | chr5_4:67420900-67420919 | None:intergenic | 35.0% | |
| TGATTGTGCAAGAACAAGTT+TGG | + | chr5_4:67421004-67421023 | Msa0866030:three_prime_UTR | 35.0% | |
| CAGACTTTCGTATGAAACTT+GGG | + | chr5_4:67421066-67421085 | Msa0866030:three_prime_UTR | 35.0% | |
| !!! | ACTTTTGCTGCTTTTGCTTT+AGG | + | chr5_4:67421392-67421411 | Msa0866030:three_prime_UTR | 35.0% |
| AAACTACAACAGGGTAACTT+GGG | - | chr5_4:67421418-67421437 | None:intergenic | 35.0% | |
| AAAACTACAACAGGGTAACT+TGG | - | chr5_4:67421419-67421438 | None:intergenic | 35.0% | |
| CTATTCGGTAAAACTACAAC+AGG | - | chr5_4:67421428-67421447 | None:intergenic | 35.0% | |
| ACATGTCAATTTGTCAGAGC+TGG | + | chr5_4:67415537-67415556 | Msa0866030:CDS | 40.0% | |
| !! | GAGAAAAGTGATTTGGTGAG+AGG | - | chr5_4:67415575-67415594 | None:intergenic | 40.0% |
| TGAATGGCACCAAAACCTTT+GGG | - | chr5_4:67415606-67415625 | None:intergenic | 40.0% | |
| ATGAATGGCACCAAAACCTT+TGG | - | chr5_4:67415607-67415626 | None:intergenic | 40.0% | |
| ! | TGGTGGAAAGTGGTAATGAA+TGG | - | chr5_4:67415622-67415641 | None:intergenic | 40.0% |
| TCATTACCACTTTCCACCAA+AGG | + | chr5_4:67415623-67415642 | Msa0866030:CDS | 40.0% | |
| CCAGATCAGAAATTCAACAG+TGG | - | chr5_4:67415657-67415676 | None:intergenic | 40.0% | |
| CCACTGTTGAATTTCTGATC+TGG | + | chr5_4:67415654-67415673 | Msa0866030:intron | 40.0% | |
| CTCTCTCTACTCAACCAAAA+TGG | + | chr5_4:67415680-67415699 | Msa0866030:intron | 40.0% | |
| TTGTCTAAGCTGATACCAAG+AGG | - | chr5_4:67415853-67415872 | None:intergenic | 40.0% | |
| ! | TTAGACAACTCTTGTTTGCC+TGG | + | chr5_4:67415865-67415884 | Msa0866030:CDS | 40.0% |
| ! | TAGACAACTCTTGTTTGCCT+GGG | + | chr5_4:67415866-67415885 | Msa0866030:CDS | 40.0% |
| TGGATACCTTTGGACAAAAG+AGG | - | chr5_4:67415903-67415922 | None:intergenic | 40.0% | |
| GGAAGAAAAGTGGATACCTT+TGG | - | chr5_4:67415913-67415932 | None:intergenic | 40.0% | |
| ATAGCTAGGTGGAAGAAAAG+TGG | - | chr5_4:67415923-67415942 | None:intergenic | 40.0% | |
| TTGATATGCCAGTGTAAAGG+TGG | + | chr5_4:67415996-67416015 | Msa0866030:intron | 40.0% | |
| TTAACTGTCCACCTTTACAC+TGG | - | chr5_4:67416007-67416026 | None:intergenic | 40.0% | |
| GTGTAAAGGTGGACAGTTAA+TGG | + | chr5_4:67416007-67416026 | Msa0866030:intron | 40.0% | |
| ! | GGTGATATTGGTATGGACTA+TGG | + | chr5_4:67416098-67416117 | Msa0866030:intron | 40.0% |
| GACAACGTCTGACATATTCA+AGG | - | chr5_4:67416143-67416162 | None:intergenic | 40.0% | |
| ! | GTGTTTTCCAATTGTCAGCA+TGG | + | chr5_4:67416275-67416294 | Msa0866030:intron | 40.0% |
| CTACAACACACAAATGCAAG+AGG | - | chr5_4:67416422-67416441 | None:intergenic | 40.0% | |
| GTAGTGAATTTGCAATCTGG+AGG | + | chr5_4:67416438-67416457 | Msa0866030:intron | 40.0% | |
| !! | AGGTGTTTTAGACCTACATG+TGG | + | chr5_4:67416458-67416477 | Msa0866030:CDS | 40.0% |
| !! | GTTTTAGACCTACATGTGGT+TGG | + | chr5_4:67416462-67416481 | Msa0866030:CDS | 40.0% |
| ATAGGTTTCTGCAGATGACA+AGG | + | chr5_4:67416582-67416601 | Msa0866030:intron | 40.0% | |
| ACTGGACAATAAACCTGATG+AGG | + | chr5_4:67416606-67416625 | Msa0866030:CDS | 40.0% | |
| TTGAATACCTTAGGACCAAG+TGG | - | chr5_4:67416649-67416668 | None:intergenic | 40.0% | |
| TTGATTATTCTCGGAGCACA+AGG | + | chr5_4:67416800-67416819 | Msa0866030:intron | 40.0% | |
| TTGACCCTTGAACATAAGGA+GGG | - | chr5_4:67417024-67417043 | None:intergenic | 40.0% | |
| TTTGACCCTTGAACATAAGG+AGG | - | chr5_4:67417025-67417044 | None:intergenic | 40.0% | |
| GGATTTGACCCTTGAACATA+AGG | - | chr5_4:67417028-67417047 | None:intergenic | 40.0% | |
| ! | AAACAGAAGCGGTTCTGATA+AGG | - | chr5_4:67417202-67417221 | None:intergenic | 40.0% |
| ! | ATCAGAACCGCTTCTGTTTT+TGG | + | chr5_4:67417203-67417222 | Msa0866030:intron | 40.0% |
| AGAAATCTCTCCTCATTTGG+GGG | - | chr5_4:67417557-67417576 | None:intergenic | 40.0% | |
| TAAGAGATAGAGGAAGACCA+AGG | - | chr5_4:67417892-67417911 | None:intergenic | 40.0% | |
| !! | TATGTGCGTGGTTTAGTTCT+TGG | + | chr5_4:67418137-67418156 | Msa0866030:intron | 40.0% |
| TGGTTGCAAGTACAGAACAA+TGG | + | chr5_4:67418253-67418272 | Msa0866030:CDS | 40.0% | |
| TGTGGTTACAGCCTGATATT+TGG | + | chr5_4:67418617-67418636 | Msa0866030:intron | 40.0% | |
| CTTGGAGTAAACCCTCTAAT+TGG | - | chr5_4:67418647-67418666 | None:intergenic | 40.0% | |
| AGATCTGCCACCAATAGAAA+AGG | + | chr5_4:67419053-67419072 | Msa0866030:intron | 40.0% | |
| AGTAGCACAGACACTTCTAA+GGG | + | chr5_4:67419113-67419132 | Msa0866030:intron | 40.0% | |
| GATTGAACGTAATCACGTGT+CGG | - | chr5_4:67419161-67419180 | None:intergenic | 40.0% | |
| CAGCAAAGCTTACTTGGATA+AGG | + | chr5_4:67419474-67419493 | Msa0866030:CDS | 40.0% | |
| CACCTAAAAGAATGGGAGAA+AGG | - | chr5_4:67419579-67419598 | None:intergenic | 40.0% | |
| ! | CTTTCTCCCATTCTTTTAGG+TGG | + | chr5_4:67419577-67419596 | Msa0866030:intron | 40.0% |
| TGCGAACCACCTAAAAGAAT+GGG | - | chr5_4:67419586-67419605 | None:intergenic | 40.0% | |
| ATGCGAACCACCTAAAAGAA+TGG | - | chr5_4:67419587-67419606 | None:intergenic | 40.0% | |
| ! | TTGACCTGGTGGATCATTAT+CGG | - | chr5_4:67419621-67419640 | None:intergenic | 40.0% |
| GTGCACATAGTATGTTGCAT+GGG | + | chr5_4:67419760-67419779 | Msa0866030:intron | 40.0% | |
| GTTGAGGTGCAATTAATCGT+TGG | - | chr5_4:67419823-67419842 | None:intergenic | 40.0% | |
| ! | CTCTGCAATCGATTTACGAT+CGG | + | chr5_4:67419899-67419918 | Msa0866030:intron | 40.0% |
| ! | TCTGCAATCGATTTACGATC+GGG | + | chr5_4:67419900-67419919 | Msa0866030:intron | 40.0% |
| ACAATGCGTTAAGCAGTTGA+GGG | - | chr5_4:67420038-67420057 | None:intergenic | 40.0% | |
| ATGAAGACACATCCTGAATC+CGG | + | chr5_4:67420138-67420157 | Msa0866030:intron | 40.0% | |
| GGACCTAAGAAAGATGAACT+CGG | + | chr5_4:67420171-67420190 | Msa0866030:intron | 40.0% | |
| AAGCCGAGTTCATCTTTCTT+AGG | - | chr5_4:67420177-67420196 | None:intergenic | 40.0% | |
| GCCTAGGTTCTCAAATACAT+GGG | + | chr5_4:67420446-67420465 | Msa0866030:intron | 40.0% | |
| TCCCATGTATTTGAGAACCT+AGG | - | chr5_4:67420450-67420469 | None:intergenic | 40.0% | |
| TAGAGAATCGCAGTGAAATG+TGG | + | chr5_4:67420686-67420705 | Msa0866030:three_prime_UTR | 40.0% | |
| TGAAGCCATGTGTCATCTAA+GGG | - | chr5_4:67420823-67420842 | None:intergenic | 40.0% | |
| CCAAGTTTCATACGAAAGTC+TGG | - | chr5_4:67421068-67421087 | None:intergenic | 40.0% | |
| CCAGACTTTCGTATGAAACT+TGG | + | chr5_4:67421065-67421084 | Msa0866030:three_prime_UTR | 40.0% | |
| GAAGTCTTGGAGCAAAAGAA+AGG | + | chr5_4:67421227-67421246 | Msa0866030:three_prime_UTR | 40.0% | |
| TGTCAATTTGTCAGAGCTGG+TGG | + | chr5_4:67415540-67415559 | Msa0866030:CDS | 45.0% | |
| TTGGGGCGAGAAAAGTGATT+TGG | - | chr5_4:67415582-67415601 | None:intergenic | 45.0% | |
| ! | CACCAAAACCTTTGGGTTTG+GGG | - | chr5_4:67415599-67415618 | None:intergenic | 45.0% |
| ! | GCACCAAAACCTTTGGGTTT+GGG | - | chr5_4:67415600-67415619 | None:intergenic | 45.0% |
| TACGTACCTTTGGTGGAAAG+TGG | - | chr5_4:67415632-67415651 | None:intergenic | 45.0% | |
| AACAGTGGAGTACGTACCTT+TGG | - | chr5_4:67415642-67415661 | None:intergenic | 45.0% | |
| AAGCACAAAGTGGAACCTCT+TGG | + | chr5_4:67415835-67415854 | Msa0866030:CDS | 45.0% | |
| CCTTTGGACAAAAGAGGTTG+TGG | - | chr5_4:67415897-67415916 | None:intergenic | 45.0% | |
| ! | CCACAACCTCTTTTGTCCAA+AGG | + | chr5_4:67415894-67415913 | Msa0866030:CDS | 45.0% |
| CAGCTTAAGTCATAGCTAGG+TGG | - | chr5_4:67415934-67415953 | None:intergenic | 45.0% | |
| CTGCAGCTTAAGTCATAGCT+AGG | - | chr5_4:67415937-67415956 | None:intergenic | 45.0% | |
| CTAGCTATGACTTAAGCTGC+AGG | + | chr5_4:67415935-67415954 | Msa0866030:intron | 45.0% | |
| TGACTTAAGCTGCAGGTAAC+AGG | + | chr5_4:67415942-67415961 | Msa0866030:intron | 45.0% | |
| GACTTAAGCTGCAGGTAACA+GGG | + | chr5_4:67415943-67415962 | Msa0866030:intron | 45.0% | |
| AAGGTGGACAGTTAATGGAG+AGG | + | chr5_4:67416012-67416031 | Msa0866030:CDS | 45.0% | |
| TTCTGCAGATGACAAGGAAC+TGG | + | chr5_4:67416588-67416607 | Msa0866030:CDS | 45.0% | |
| AAACCTGATGAGGAGAGCTT+AGG | + | chr5_4:67416616-67416635 | Msa0866030:CDS | 45.0% | |
| AACCTGATGAGGAGAGCTTA+GGG | + | chr5_4:67416617-67416636 | Msa0866030:CDS | 45.0% | |
| TCTACCCCTCCTTATGTTCA+AGG | + | chr5_4:67417016-67417035 | Msa0866030:intron | 45.0% | |
| CTACCCCTCCTTATGTTCAA+GGG | + | chr5_4:67417017-67417036 | Msa0866030:intron | 45.0% | |
| TGACCCTTGAACATAAGGAG+GGG | - | chr5_4:67417023-67417042 | None:intergenic | 45.0% | |
| TGCAGTAGTAGTGTGGTCAA+TGG | + | chr5_4:67417102-67417121 | Msa0866030:intron | 45.0% | |
| GTATGTTCAAGTGGGTACCA+AGG | + | chr5_4:67417137-67417156 | Msa0866030:intron | 45.0% | |
| AGTGGGTACCAAGGAAGTTA+AGG | + | chr5_4:67417146-67417165 | Msa0866030:intron | 45.0% | |
| ! | GATGGTAGCCTTAACTTCCT+TGG | - | chr5_4:67417157-67417176 | None:intergenic | 45.0% |
| TGGACAGCCAAAAACAGAAG+CGG | - | chr5_4:67417213-67417232 | None:intergenic | 45.0% | |
| ATCTGACTAGCACCTGAAAG+TGG | - | chr5_4:67417254-67417273 | None:intergenic | 45.0% | |
| ATAAAGGAAAATGGGAGGGG+AGG | - | chr5_4:67417608-67417627 | None:intergenic | 45.0% | |
| !! | GAAGGGAGGCTTTGGAAAAA+AGG | - | chr5_4:67417649-67417668 | None:intergenic | 45.0% |
| !! | AGCTTTGTTTGCAAGGGGAA+GGG | - | chr5_4:67417666-67417685 | None:intergenic | 45.0% |
| !! | AAGCTTTGTTTGCAAGGGGA+AGG | - | chr5_4:67417667-67417686 | None:intergenic | 45.0% |
| CATGCAAGCATGGTTTGAAC+TGG | - | chr5_4:67418305-67418324 | None:intergenic | 45.0% | |
| TTCATAACCAGTTAGGCAGG+TGG | + | chr5_4:67418397-67418416 | Msa0866030:intron | 45.0% | |
| CAGGTGGTTCCTTTATTGTG+TGG | + | chr5_4:67418413-67418432 | Msa0866030:intron | 45.0% | |
| GGTTACAGCCTGATATTTGG+AGG | + | chr5_4:67418620-67418639 | Msa0866030:intron | 45.0% | |
| AAGCTTTCACTTGAAGAGGC+TGG | + | chr5_4:67418976-67418995 | Msa0866030:CDS | 45.0% | |
| CAGTAGCACAGACACTTCTA+AGG | + | chr5_4:67419112-67419131 | Msa0866030:intron | 45.0% | |
| ! | CTTCTAAGGGAATGTGTGTC+CGG | + | chr5_4:67419126-67419145 | Msa0866030:intron | 45.0% |
| CACCAGACATGACACTTACA+CGG | - | chr5_4:67419221-67419240 | None:intergenic | 45.0% | |
| !! | AGTAAGCTTTGCTGTTCCAC+AGG | - | chr5_4:67419468-67419487 | None:intergenic | 45.0% |
| GTGGAACAGCAAAGCTTACT+TGG | + | chr5_4:67419468-67419487 | Msa0866030:CDS | 45.0% | |
| TTAGGTGGTTCGCATTATCC+TGG | + | chr5_4:67419592-67419611 | Msa0866030:intron | 45.0% | |
| TCTTCAGCTAAAGCTTGACC+TGG | - | chr5_4:67419635-67419654 | None:intergenic | 45.0% | |
| CTTTAGCTGAAGAGCTAGCA+CGG | + | chr5_4:67419642-67419661 | Msa0866030:CDS | 45.0% | |
| CGTGCACATAGTATGTTGCA+TGG | + | chr5_4:67419759-67419778 | Msa0866030:intron | 45.0% | |
| ATTGTTACTGCAGGGAATCC+AGG | - | chr5_4:67419852-67419871 | None:intergenic | 45.0% | |
| TGCGTGGTATTGTTACTGCA+GGG | - | chr5_4:67419860-67419879 | None:intergenic | 45.0% | |
| GATTGTTACGAGTAACTGCG+TGG | - | chr5_4:67419876-67419895 | None:intergenic | 45.0% | |
| CACAATGCGTTAAGCAGTTG+AGG | - | chr5_4:67420039-67420058 | None:intergenic | 45.0% | |
| ! | CAATTGTGGTTAATGGGCCT+AGG | + | chr5_4:67420430-67420449 | Msa0866030:intron | 45.0% |
| GGCCTAGGTTCTCAAATACA+TGG | + | chr5_4:67420445-67420464 | Msa0866030:intron | 45.0% | |
| TTAGGATCGCGTTTCAGCTA+TGG | - | chr5_4:67420742-67420761 | None:intergenic | 45.0% | |
| GTGAAGCCATGTGTCATCTA+AGG | - | chr5_4:67420824-67420843 | None:intergenic | 45.0% | |
| GTATGAAACTTGGGCAACTG+TGG | + | chr5_4:67421075-67421094 | Msa0866030:three_prime_UTR | 45.0% | |
| AAACTTGGGCAACTGTGGTA+CGG | + | chr5_4:67421080-67421099 | Msa0866030:intron | 45.0% | |
| TGGAGCAAAAGAAAGGAGTC+TGG | + | chr5_4:67421234-67421253 | Msa0866030:three_prime_UTR | 45.0% | |
| ! | AAAGGAGTCTGGAGCTGATT+TGG | + | chr5_4:67421245-67421264 | Msa0866030:three_prime_UTR | 45.0% |
| !!! | ATATGATTTTTTTTTTTTTT+TGG | + | chr5_4:67418680-67418699 | Msa0866030:intron | 5.0% |
| ! | TTTTCTCGCCCCAAACCCAA+AGG | + | chr5_4:67415588-67415607 | Msa0866030:CDS | 50.0% |
| ! | GGCACCAAAACCTTTGGGTT+TGG | - | chr5_4:67415601-67415620 | None:intergenic | 50.0% |
| AGTGGAGTACGTACCTTTGG+TGG | - | chr5_4:67415639-67415658 | None:intergenic | 50.0% | |
| AAGAGGTTGTGGTAGTTCCC+AGG | - | chr5_4:67415886-67415905 | None:intergenic | 50.0% | |
| AACCCTAAGCTCTCCTCATC+AGG | - | chr5_4:67416622-67416641 | None:intergenic | 50.0% | |
| TGATGAGGAGAGCTTAGGGT+TGG | + | chr5_4:67416621-67416640 | Msa0866030:CDS | 50.0% | |
| AGCTTAGGGTTGGAACCACT+TGG | + | chr5_4:67416631-67416650 | Msa0866030:CDS | 50.0% | |
| GTTGGAACCACTTGGTCCTA+AGG | + | chr5_4:67416639-67416658 | Msa0866030:CDS | 50.0% | |
| AAGGCAACTCTCGGACGAAA+AGG | + | chr5_4:67417367-67417386 | Msa0866030:intron | 50.0% | |
| AAATGGGAGGGGAGGACTTT+GGG | - | chr5_4:67417600-67417619 | None:intergenic | 50.0% | |
| AAAATGGGAGGGGAGGACTT+TGG | - | chr5_4:67417601-67417620 | None:intergenic | 50.0% | |
| TTTGTTTGCAAGGGGAAGGG+AGG | - | chr5_4:67417663-67417682 | None:intergenic | 50.0% | |
| AAAGGAACCACCTGCCTAAC+TGG | - | chr5_4:67418407-67418426 | None:intergenic | 50.0% | |
| ! | ACGTAATCACGTGTCGGTGT+CGG | - | chr5_4:67419155-67419174 | None:intergenic | 50.0% |
| TTACACGGACACGTTGAGAC+TGG | - | chr5_4:67419206-67419225 | None:intergenic | 50.0% | |
| GTCCGTGTAAGTGTCATGTC+TGG | + | chr5_4:67419216-67419235 | Msa0866030:intron | 50.0% | |
| GTGGATCATTATCGGTAGCC+AGG | - | chr5_4:67419613-67419632 | None:intergenic | 50.0% | |
| GCTACCGATAATGATCCACC+AGG | + | chr5_4:67419614-67419633 | Msa0866030:CDS | 50.0% | |
| TCAGCTAAAGCTTGACCTGG+TGG | - | chr5_4:67419632-67419651 | None:intergenic | 50.0% | |
| TGAATGACCTTTCTCGCCCA+AGG | - | chr5_4:67419670-67419689 | None:intergenic | 50.0% | |
| TTGCACCTCAACTACAGACC+TGG | + | chr5_4:67419831-67419850 | Msa0866030:intron | 50.0% | |
| GGAATCCAGGTCTGTAGTTG+AGG | - | chr5_4:67419839-67419858 | None:intergenic | 50.0% | |
| CTGCGTGGTATTGTTACTGC+AGG | - | chr5_4:67419861-67419880 | None:intergenic | 50.0% | |
| CTTAGGTCCATTATGAGCGC+CGG | - | chr5_4:67420160-67420179 | None:intergenic | 50.0% | |
| ATCGCGTTTCAGCTATGGCA+TGG | - | chr5_4:67420737-67420756 | None:intergenic | 50.0% | |
| GCAAAAGTCATCCAGAGAGG+TGG | - | chr5_4:67421380-67421399 | None:intergenic | 50.0% | |
| GCAGCAAAAGTCATCCAGAG+AGG | - | chr5_4:67421383-67421402 | None:intergenic | 50.0% | |
| ! | CGCCCCAAACCCAAAGGTTT+TGG | + | chr5_4:67415594-67415613 | Msa0866030:CDS | 55.0% |
| AGACCTACATGTGGTTGGGC+TGG | + | chr5_4:67416467-67416486 | Msa0866030:CDS | 55.0% | |
| TGACCAGCCCAACCACATGT+AGG | - | chr5_4:67416473-67416492 | None:intergenic | 55.0% | |
| !! | TACATGTGGTTGGGCTGGTC+AGG | + | chr5_4:67416472-67416491 | Msa0866030:CDS | 55.0% |
| AATGGGAGGGGAGGACTTTG+GGG | - | chr5_4:67417599-67417618 | None:intergenic | 55.0% | |
| ! | AGTGTTCCTGATGGTGCACC+AGG | + | chr5_4:67419015-67419034 | Msa0866030:CDS | 55.0% |
| ! | TCCTGATGGTGCACCAGGAA+AGG | + | chr5_4:67419020-67419039 | Msa0866030:CDS | 55.0% |
| ACCTTTCCTGGTGCACCATC+AGG | - | chr5_4:67419024-67419043 | None:intergenic | 55.0% | |
| TTGCGCTCGAACTTGCAGCT+TGG | + | chr5_4:67419787-67419806 | Msa0866030:intron | 55.0% | |
| !! | CCATTATGAGCGCCGGATTC+AGG | - | chr5_4:67420153-67420172 | None:intergenic | 55.0% |
| CCTGAATCCGGCGCTCATAA+TGG | + | chr5_4:67420150-67420169 | Msa0866030:intron | 55.0% | |
| !! | TCAGGTGTTGGCAAGTACGC+TGG | + | chr5_4:67420221-67420240 | Msa0866030:intron | 55.0% |
| AGTCATCCAGAGAGGTGGCA+CGG | - | chr5_4:67421375-67421394 | None:intergenic | 55.0% | |
| ATGGGAGGGGAGGACTTTGG+GGG | - | chr5_4:67417598-67417617 | None:intergenic | 60.0% | |
| TGCAAGGGGAAGGGAGGCTT+TGG | - | chr5_4:67417657-67417676 | None:intergenic | 60.0% | |
| AAGAGCTAGCACGGCGCCTT+GGG | + | chr5_4:67419651-67419670 | Msa0866030:CDS | 60.0% | |
| CTTGGGCAACTGTGGTACGG+AGG | + | chr5_4:67421083-67421102 | Msa0866030:intron | 60.0% | |
| TCTCCCCCAAGTCAGAAGCC+TGG | + | chr5_4:67421302-67421321 | Msa0866030:three_prime_UTR | 60.0% | |
| !! | GTGCCAGGCTTCTGACTTGG+GGG | - | chr5_4:67421308-67421327 | None:intergenic | 60.0% |
| ! | CGTGCCAGGCTTCTGACTTG+GGG | - | chr5_4:67421309-67421328 | None:intergenic | 60.0% |
| CCGTGCCAGGCTTCTGACTT+GGG | - | chr5_4:67421310-67421329 | None:intergenic | 60.0% | |
| CCCAAGTCAGAAGCCTGGCA+CGG | + | chr5_4:67421307-67421326 | Msa0866030:three_prime_UTR | 60.0% | |
| !! | CACGTGTCGGTGTCGGACAC+CGG | - | chr5_4:67419148-67419167 | None:intergenic | 65.0% |
| GAAGAGCTAGCACGGCGCCT+TGG | + | chr5_4:67419650-67419669 | Msa0866030:CDS | 65.0% | |
| GCCGTGCCAGGCTTCTGACT+TGG | - | chr5_4:67421311-67421330 | None:intergenic | 65.0% | |
| GGCCCGTGCTAAGGTTGGCA+CGG | + | chr5_4:67421328-67421347 | Msa0866030:intron | 65.0% | |
| GGCCGTGCCAACCTTAGCAC+GGG | - | chr5_4:67421333-67421352 | None:intergenic | 65.0% | |
| GGGCCGTGCCAACCTTAGCA+CGG | - | chr5_4:67421334-67421353 | None:intergenic | 65.0% | |
| GGCCCGTGCTAAGGTTGGCA+CGG | + | chr5_4:67421328-67421347 | Msa0866030:intron | 65.0% | |
| GGCCGTGCCAACCTTAGCAC+GGG | - | chr5_4:67421333-67421352 | None:intergenic | 65.0% | |
| CGGCCGTGCCAACCTTAGCA+CGG | - | chr5_4:67421355-67421374 | None:intergenic | 65.0% | |
| CACGGCGCCTTGGGCGAGAA+AGG | + | chr5_4:67419660-67419679 | Msa0866030:CDS | 70.0% | |
| ACCTTAGCACGGGCCGTGCC+AGG | - | chr5_4:67421323-67421342 | None:intergenic | 70.0% | |
| GGCACGGCCCGTGCTAAGGT+TGG | + | chr5_4:67421323-67421342 | Msa0866030:intron | 70.0% | |
| GGTTGGCACGGCCCGTGCTA+AGG | + | chr5_4:67421340-67421359 | Msa0866030:intron | 70.0% | |
| GGCACGGCCCGTGCTAAGGT+TGG | + | chr5_4:67421323-67421342 | Msa0866030:intron | 70.0% | |
| GCCTGGCACGGCCCGTGCTA+AGG | + | chr5_4:67421319-67421338 | Msa0866030:three_prime_UTR | 75.0% | |
| GCACGGCCGTGCCACCTCTC+TGG | + | chr5_4:67421366-67421385 | Msa0866030:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 67415524 | 67421461 | 67415524 | ID=Msa0866030;Name=Msa0866030 |
| chr5_4 | mRNA | 67415524 | 67421461 | 67415524 | ID=Msa0866030-mRNA-1;Parent=Msa0866030;Name=Msa0866030-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0.78|0.73|1|0.78|0.73|15|803|342 |
| chr5_4 | exon | 67415524 | 67415644 | 67415524 | ID=Msa0866030-mRNA-1:exon:21270;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67415749 | 67415915 | 67415749 | ID=Msa0866030-mRNA-1:exon:21271;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67416008 | 67416063 | 67416008 | ID=Msa0866030-mRNA-1:exon:21272;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67416442 | 67416493 | 67416442 | ID=Msa0866030-mRNA-1:exon:21273;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67416586 | 67416660 | 67416586 | ID=Msa0866030-mRNA-1:exon:21274;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67417308 | 67417364 | 67417308 | ID=Msa0866030-mRNA-1:exon:21275;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67418212 | 67418292 | 67418212 | ID=Msa0866030-mRNA-1:exon:21276;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67418777 | 67418842 | 67418777 | ID=Msa0866030-mRNA-1:exon:21277;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67418958 | 67419041 | 67418958 | ID=Msa0866030-mRNA-1:exon:21278;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67419448 | 67419495 | 67419448 | ID=Msa0866030-mRNA-1:exon:21279;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67419596 | 67419681 | 67419596 | ID=Msa0866030-mRNA-1:exon:21280;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67420225 | 67420285 | 67420225 | ID=Msa0866030-mRNA-1:exon:21281;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67420452 | 67421096 | 67420452 | ID=Msa0866030-mRNA-1:exon:21282;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67421208 | 67421340 | 67421208 | ID=Msa0866030-mRNA-1:exon:21283;Parent=Msa0866030-mRNA-1 |
| chr5_4 | exon | 67421362 | 67421461 | 67421362 | ID=Msa0866030-mRNA-1:exon:21284;Parent=Msa0866030-mRNA-1 |
| chr5_4 | CDS | 67415524 | 67415644 | 67415524 | ID=Msa0866030-mRNA-1:cds;Parent=Msa0866030-mRNA-1 |
| chr5_4 | CDS | 67415749 | 67415915 | 67415749 | ID=Msa0866030-mRNA-1:cds;Parent=Msa0866030-mRNA-1 |
| chr5_4 | CDS | 67416008 | 67416063 | 67416008 | ID=Msa0866030-mRNA-1:cds;Parent=Msa0866030-mRNA-1 |
| chr5_4 | CDS | 67416442 | 67416493 | 67416442 | ID=Msa0866030-mRNA-1:cds;Parent=Msa0866030-mRNA-1 |
| chr5_4 | CDS | 67416586 | 67416660 | 67416586 | ID=Msa0866030-mRNA-1:cds;Parent=Msa0866030-mRNA-1 |
| chr5_4 | CDS | 67417308 | 67417364 | 67417308 | ID=Msa0866030-mRNA-1:cds;Parent=Msa0866030-mRNA-1 |
| chr5_4 | CDS | 67418212 | 67418292 | 67418212 | ID=Msa0866030-mRNA-1:cds;Parent=Msa0866030-mRNA-1 |
| chr5_4 | CDS | 67418777 | 67418842 | 67418777 | ID=Msa0866030-mRNA-1:cds;Parent=Msa0866030-mRNA-1 |
| chr5_4 | CDS | 67418958 | 67419041 | 67418958 | ID=Msa0866030-mRNA-1:cds;Parent=Msa0866030-mRNA-1 |
| chr5_4 | CDS | 67419448 | 67419495 | 67419448 | ID=Msa0866030-mRNA-1:cds;Parent=Msa0866030-mRNA-1 |
| chr5_4 | CDS | 67419596 | 67419681 | 67419596 | ID=Msa0866030-mRNA-1:cds;Parent=Msa0866030-mRNA-1 |
| chr5_4 | CDS | 67420225 | 67420285 | 67420225 | ID=Msa0866030-mRNA-1:cds;Parent=Msa0866030-mRNA-1 |
| chr5_4 | CDS | 67420452 | 67420526 | 67420452 | ID=Msa0866030-mRNA-1:cds;Parent=Msa0866030-mRNA-1 |
| chr5_4 | three_prime_UTR | 67420527 | 67421096 | 67420527 | ID=Msa0866030-mRNA-1:three_prime_utr;Parent=Msa0866030-mRNA-1 |
| chr5_4 | three_prime_UTR | 67421208 | 67421340 | 67421208 | ID=Msa0866030-mRNA-1:three_prime_utr;Parent=Msa0866030-mRNA-1 |
| chr5_4 | three_prime_UTR | 67421362 | 67421461 | 67421362 | ID=Msa0866030-mRNA-1:three_prime_utr;Parent=Msa0866030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
