Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1367980 | XP_013468193.1 | 97.443 | 704 | 14 | 2 | 1 | 702 | 1 | 702 | 0.0 | 1423 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1367980 | sp|Q653H7|ARFR_ORYSJ | 56.461 | 712 | 268 | 16 | 14 | 701 | 1 | 694 | 0.0 | 758 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1367980 | A0A072VVW0 | 97.443 | 704 | 14 | 2 | 1 | 702 | 1 | 702 | 0.0 | 1423 |
Gene ID | Type | Classification |
---|---|---|
Msa1367980 | TF | B3-ARF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0073780 | Msa1367980 | 0.900623 | 6.089565e-78 | -8.615850e-47 |
Msa0390640 | Msa1367980 | 0.966132 | 1.630945e-125 | -8.615850e-47 |
Msa0946420 | Msa1367980 | 0.961355 | 1.320280e-119 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1367980 | MtrunA17_Chr1g0181211 | 97.395 | 691 | 14 | 2 | 14 | 702 | 1 | 689 | 0.0 | 1394 |
Msa1367980 | MtrunA17_Chr2g0326761 | 58.055 | 689 | 242 | 13 | 33 | 700 | 4 | 666 | 0.0 | 754 |
Msa1367980 | MtrunA17_Chr4g0028971 | 59.130 | 690 | 223 | 13 | 37 | 700 | 9 | 665 | 0.0 | 737 |
Msa1367980 | MtrunA17_Chr7g0264171 | 54.892 | 603 | 239 | 11 | 33 | 622 | 24 | 606 | 0.0 | 622 |
Msa1367980 | MtrunA17_Chr1g0199681 | 50.000 | 644 | 241 | 12 | 14 | 615 | 76 | 680 | 0.0 | 568 |
Msa1367980 | MtrunA17_Chr7g0264161 | 55.233 | 344 | 111 | 3 | 49 | 392 | 1 | 301 | 7.28e-125 | 373 |
Msa1367980 | MtrunA17_Chr3g0115271 | 41.397 | 587 | 289 | 16 | 37 | 597 | 16 | 573 | 1.52e-117 | 365 |
Msa1367980 | MtrunA17_Chr5g0424931 | 42.765 | 463 | 212 | 14 | 35 | 483 | 14 | 437 | 2.52e-103 | 325 |
Msa1367980 | MtrunA17_Chr5g0417281 | 38.821 | 407 | 185 | 7 | 34 | 435 | 5 | 352 | 1.04e-86 | 282 |
Msa1367980 | MtrunA17_Chr5g0436761 | 37.882 | 425 | 194 | 10 | 37 | 452 | 9 | 372 | 6.99e-80 | 262 |
Msa1367980 | MtrunA17_Chr1g0178011 | 36.190 | 420 | 203 | 10 | 35 | 446 | 7 | 369 | 2.13e-79 | 261 |
Msa1367980 | MtrunA17_Chr4g0009751 | 30.073 | 685 | 389 | 18 | 24 | 684 | 3 | 621 | 9.60e-79 | 263 |
Msa1367980 | MtrunA17_Chr2g0289221 | 41.144 | 367 | 143 | 9 | 37 | 392 | 17 | 321 | 1.40e-78 | 255 |
Msa1367980 | MtrunA17_Chr2g0282961 | 36.446 | 439 | 214 | 11 | 36 | 463 | 51 | 435 | 4.13e-77 | 259 |
Msa1367980 | MtrunA17_Chr2g0276781 | 31.324 | 680 | 368 | 18 | 40 | 696 | 23 | 626 | 3.15e-76 | 258 |
Msa1367980 | MtrunA17_Chr1g0156321 | 37.209 | 387 | 190 | 6 | 33 | 412 | 36 | 376 | 5.91e-76 | 261 |
Msa1367980 | MtrunA17_Chr8g0385791 | 35.492 | 417 | 219 | 6 | 19 | 430 | 38 | 409 | 7.33e-75 | 258 |
Msa1367980 | MtrunA17_Chr2g0326281 | 37.063 | 429 | 198 | 11 | 40 | 441 | 56 | 439 | 1.04e-72 | 251 |
Msa1367980 | MtrunA17_Chr4g0029671 | 36.867 | 415 | 204 | 8 | 40 | 438 | 54 | 426 | 8.21e-72 | 249 |
Msa1367980 | MtrunA17_Chr5g0417211 | 37.867 | 375 | 165 | 7 | 37 | 402 | 9 | 324 | 1.14e-71 | 238 |
Msa1367980 | MtrunA17_Chr4g0046371 | 32.635 | 573 | 293 | 18 | 36 | 590 | 36 | 533 | 1.20e-71 | 246 |
Msa1367980 | MtrunA17_Chr2g0277461 | 34.414 | 401 | 194 | 11 | 39 | 430 | 12 | 352 | 2.96e-71 | 239 |
Msa1367980 | MtrunA17_Chr5g0433301 | 35.038 | 391 | 204 | 7 | 34 | 418 | 18 | 364 | 5.73e-70 | 244 |
Msa1367980 | MtrunA17_Chr8g0376771 | 36.000 | 400 | 206 | 8 | 31 | 425 | 14 | 368 | 1.49e-69 | 244 |
Msa1367980 | MtrunA17_Chr4g0070181 | 37.530 | 413 | 208 | 7 | 18 | 425 | 1 | 368 | 1.58e-69 | 246 |
Msa1367980 | MtrunA17_Chr2g0285461 | 36.409 | 401 | 204 | 9 | 31 | 425 | 14 | 369 | 1.95e-68 | 241 |
Msa1367980 | MtrunA17_Chr8g0389081 | 38.342 | 386 | 186 | 6 | 37 | 415 | 29 | 369 | 4.88e-68 | 242 |
Msa1367980 | MtrunA17_Chr3g0109391 | 34.271 | 391 | 207 | 8 | 34 | 418 | 20 | 366 | 3.68e-65 | 231 |
Msa1367980 | MtrunA17_Chr8g0346711 | 37.221 | 403 | 192 | 10 | 40 | 433 | 29 | 379 | 3.15e-64 | 225 |
Msa1367980 | MtrunA17_Chr7g0239061 | 34.529 | 446 | 220 | 14 | 28 | 464 | 4 | 386 | 1.12e-63 | 224 |
Msa1367980 | MtrunA17_Chr2g0301251 | 47.059 | 221 | 110 | 2 | 28 | 243 | 11 | 229 | 7.77e-58 | 212 |
Msa1367980 | MtrunA17_Chr2g0301251 | 40.777 | 103 | 60 | 1 | 313 | 415 | 257 | 358 | 7.91e-17 | 85.1 |
Msa1367980 | MtrunA17_Chr5g0424801 | 35.749 | 414 | 194 | 15 | 37 | 438 | 9 | 362 | 4.66e-57 | 198 |
Msa1367980 | MtrunA17_Chr5g0425261 | 35.749 | 414 | 194 | 15 | 37 | 438 | 9 | 362 | 1.39e-56 | 197 |
Msa1367980 | MtrunA17_Chr2g0277531 | 31.781 | 365 | 177 | 11 | 37 | 392 | 17 | 318 | 3.45e-55 | 191 |
Msa1367980 | MtrunA17_Chr5g0424741 | 29.771 | 524 | 245 | 18 | 35 | 488 | 7 | 477 | 1.07e-49 | 182 |
Msa1367980 | MtrunA17_Chr5g0425661 | 41.667 | 192 | 106 | 4 | 40 | 228 | 37 | 225 | 9.60e-47 | 166 |
Msa1367980 | MtrunA17_Chr8g0356211 | 30.255 | 314 | 158 | 9 | 148 | 461 | 2 | 254 | 3.26e-37 | 141 |
Msa1367980 | MtrunA17_Chr5g0425651 | 41.071 | 112 | 61 | 2 | 306 | 414 | 1 | 110 | 5.41e-19 | 83.6 |
Msa1367980 | MtrunA17_Chr5g0424791 | 33.117 | 154 | 88 | 5 | 85 | 236 | 11 | 151 | 5.91e-17 | 78.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1367980 | AT4G30080.1 | 55.507 | 681 | 259 | 13 | 33 | 699 | 12 | 662 | 0.0 | 695 |
Msa1367980 | AT2G28350.1 | 53.152 | 698 | 257 | 18 | 32 | 699 | 2 | 659 | 0.0 | 652 |
Msa1367980 | AT2G28350.2 | 53.009 | 698 | 258 | 18 | 32 | 699 | 2 | 659 | 0.0 | 652 |
Msa1367980 | AT1G77850.1 | 42.208 | 462 | 228 | 12 | 35 | 482 | 14 | 450 | 1.86e-113 | 354 |
Msa1367980 | AT1G77850.2 | 42.576 | 458 | 232 | 12 | 35 | 482 | 14 | 450 | 2.47e-113 | 354 |
Msa1367980 | AT1G59750.4 | 31.454 | 674 | 366 | 16 | 40 | 696 | 22 | 616 | 6.41e-80 | 268 |
Msa1367980 | AT1G59750.1 | 31.642 | 670 | 375 | 14 | 40 | 696 | 22 | 621 | 1.63e-79 | 267 |
Msa1367980 | AT1G59750.3 | 31.642 | 670 | 375 | 14 | 40 | 696 | 22 | 621 | 1.63e-79 | 267 |
Msa1367980 | AT1G59750.2 | 31.493 | 670 | 373 | 15 | 40 | 696 | 22 | 618 | 9.24e-79 | 265 |
Msa1367980 | AT1G19850.2 | 37.859 | 383 | 186 | 6 | 37 | 412 | 40 | 377 | 7.63e-76 | 262 |
Msa1367980 | AT1G19850.1 | 37.859 | 383 | 186 | 6 | 37 | 412 | 51 | 388 | 1.00e-75 | 262 |
Msa1367980 | AT2G33860.1 | 35.792 | 461 | 233 | 11 | 36 | 481 | 52 | 464 | 4.07e-75 | 254 |
Msa1367980 | AT2G46530.1 | 29.872 | 703 | 335 | 22 | 15 | 696 | 3 | 568 | 1.64e-74 | 252 |
Msa1367980 | AT5G60450.2 | 37.838 | 407 | 189 | 11 | 40 | 430 | 41 | 399 | 2.09e-74 | 256 |
Msa1367980 | AT5G60450.1 | 37.838 | 407 | 189 | 11 | 40 | 430 | 65 | 423 | 3.84e-74 | 255 |
Msa1367980 | AT4G23980.1 | 29.985 | 677 | 367 | 18 | 40 | 696 | 12 | 601 | 4.02e-74 | 252 |
Msa1367980 | AT2G46530.3 | 30.236 | 678 | 322 | 21 | 40 | 696 | 42 | 589 | 8.95e-74 | 251 |
Msa1367980 | AT5G37020.2 | 36.041 | 394 | 200 | 6 | 32 | 418 | 14 | 362 | 1.05e-72 | 251 |
Msa1367980 | AT5G37020.1 | 36.041 | 394 | 200 | 6 | 32 | 418 | 14 | 362 | 2.03e-72 | 251 |
Msa1367980 | AT4G23980.2 | 29.690 | 677 | 367 | 18 | 40 | 696 | 12 | 599 | 3.00e-72 | 247 |
Msa1367980 | AT5G62000.2 | 34.346 | 428 | 223 | 7 | 15 | 430 | 30 | 411 | 1.69e-71 | 249 |
Msa1367980 | AT5G62000.5 | 34.346 | 428 | 223 | 7 | 15 | 430 | 30 | 411 | 1.69e-71 | 249 |
Msa1367980 | AT5G62000.3 | 34.346 | 428 | 223 | 7 | 15 | 430 | 30 | 411 | 1.69e-71 | 249 |
Msa1367980 | AT5G62000.1 | 34.346 | 428 | 223 | 7 | 15 | 430 | 30 | 411 | 1.69e-71 | 249 |
Msa1367980 | AT5G62000.4 | 34.346 | 428 | 223 | 7 | 15 | 430 | 30 | 411 | 1.74e-71 | 249 |
Msa1367980 | AT3G61830.1 | 35.147 | 441 | 224 | 12 | 22 | 455 | 7 | 392 | 3.07e-70 | 241 |
Msa1367980 | AT1G30330.1 | 35.910 | 401 | 206 | 9 | 31 | 425 | 14 | 369 | 1.34e-68 | 242 |
Msa1367980 | AT1G30330.3 | 35.930 | 398 | 204 | 9 | 34 | 425 | 19 | 371 | 1.86e-68 | 242 |
Msa1367980 | AT1G30330.2 | 35.930 | 398 | 204 | 9 | 34 | 425 | 19 | 371 | 1.86e-68 | 242 |
Msa1367980 | AT5G20730.2 | 36.609 | 407 | 208 | 6 | 28 | 429 | 12 | 373 | 2.47e-66 | 238 |
Msa1367980 | AT1G19220.1 | 36.855 | 407 | 207 | 6 | 28 | 429 | 11 | 372 | 2.60e-66 | 237 |
Msa1367980 | AT5G20730.3 | 36.520 | 408 | 208 | 7 | 28 | 429 | 12 | 374 | 4.24e-65 | 234 |
Msa1367980 | AT5G20730.1 | 36.520 | 408 | 208 | 7 | 28 | 429 | 12 | 374 | 5.07e-65 | 234 |
Msa1367980 | AT1G35520.1 | 28.846 | 676 | 349 | 21 | 40 | 696 | 27 | 589 | 7.86e-62 | 218 |
Msa1367980 | AT1G34410.1 | 28.251 | 669 | 362 | 19 | 40 | 696 | 27 | 589 | 9.13e-62 | 218 |
Msa1367980 | AT1G34390.1 | 28.018 | 671 | 361 | 22 | 40 | 697 | 27 | 588 | 5.20e-59 | 210 |
Msa1367980 | AT3G61830.2 | 35.925 | 373 | 183 | 10 | 84 | 455 | 24 | 341 | 2.46e-57 | 204 |
Msa1367980 | AT1G34310.1 | 34.988 | 403 | 196 | 11 | 40 | 433 | 27 | 372 | 2.92e-57 | 205 |
Msa1367980 | AT1G35240.1 | 34.048 | 420 | 210 | 11 | 40 | 450 | 27 | 388 | 3.99e-57 | 204 |
Msa1367980 | AT1G35540.1 | 34.336 | 399 | 199 | 10 | 40 | 430 | 27 | 370 | 9.62e-57 | 204 |
Msa1367980 | AT2G33860.2 | 36.467 | 351 | 169 | 8 | 140 | 481 | 2 | 307 | 5.94e-56 | 198 |
Msa1367980 | AT2G46530.2 | 29.649 | 570 | 265 | 18 | 139 | 696 | 36 | 481 | 2.26e-54 | 195 |
Msa1367980 | AT1G34170.1 | 32.587 | 402 | 204 | 11 | 40 | 431 | 25 | 369 | 1.89e-53 | 192 |
Msa1367980 | AT5G37020.3 | 35.943 | 281 | 134 | 4 | 140 | 418 | 31 | 267 | 1.93e-47 | 179 |
Msa1367980 | AT1G34170.2 | 31.095 | 402 | 184 | 11 | 40 | 431 | 25 | 343 | 6.74e-47 | 173 |
Msa1367980 | AT1G34170.3 | 31.095 | 402 | 184 | 11 | 40 | 431 | 25 | 343 | 2.47e-46 | 173 |
Msa1367980 | AT1G43950.1 | 41.346 | 208 | 102 | 7 | 40 | 239 | 27 | 222 | 3.74e-38 | 141 |
Msa1367980 | ATMG00940.1 | 37.500 | 168 | 90 | 3 | 227 | 393 | 1 | 154 | 1.09e-23 | 98.6 |
Msa1367980 | AT2G46870.1 | 34.862 | 109 | 64 | 2 | 129 | 237 | 24 | 125 | 3.38e-11 | 65.5 |
Msa1367980 | AT3G25730.1 | 36.458 | 96 | 59 | 1 | 140 | 233 | 183 | 278 | 5.45e-11 | 65.1 |
Msa1367980 | AT3G61970.1 | 27.670 | 206 | 120 | 7 | 132 | 316 | 4 | 201 | 7.34e-11 | 64.3 |
Find 206 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGAAGATGAATATATTTA+TGG | 0.118268 | tig0018581:-133029 | Msa1367980:CDS |
GTCTCGAATAAGTTGGTTTA+TGG | 0.152750 | tig0018581:-131979 | Msa1367980:CDS |
AGATGGAAATACCAATAAAA+TGG | 0.189014 | tig0018581:-131037 | Msa1367980:CDS |
GCATAAACCTCATCTGTTTC+AGG | 0.203134 | tig0018581:+132767 | None:intergenic |
CCCTCCTCTTCAGAACATTT+TGG | 0.208126 | tig0018581:-132540 | Msa1367980:CDS |
TGAGAAAGGTGAAAGGTTTA+TGG | 0.219953 | tig0018581:+131497 | None:intergenic |
CGAAGAAACGGAAGCAAGTT+TGG | 0.233645 | tig0018581:-130920 | Msa1367980:CDS |
TAAGCTTAAGCTTGTTCCTT+TGG | 0.291537 | tig0018581:-132744 | Msa1367980:CDS |
TGGTTTATGGGAATTGTATC+TGG | 0.292586 | tig0018581:-131966 | Msa1367980:CDS |
TCATTGTGCGTGTATGCTTT+TGG | 0.304198 | tig0018581:-133854 | Msa1367980:five_prime_UTR |
GAAACGATGGCACTGAAATT+TGG | 0.305036 | tig0018581:+131421 | None:intergenic |
GGACAATTCATGAAGTTAAC+AGG | 0.315804 | tig0018581:+132845 | None:intergenic |
TCGTTTCCTAGTAACCTTCT+AGG | 0.317283 | tig0018581:-131405 | Msa1367980:CDS |
AGTTCAGGCAGGTCTATTTC+CGG | 0.319570 | tig0018581:-131277 | Msa1367980:CDS |
CAAGAGAAGCAGTGAGCAAC+TGG | 0.324862 | tig0018581:-133292 | Msa1367980:five_prime_UTR |
TTCACCTTGGAGGCTTCTTC+AGG | 0.328238 | tig0018581:-131910 | Msa1367980:intron |
AAGCTTAAGCTTGTTCCTTT+GGG | 0.328422 | tig0018581:-132743 | Msa1367980:CDS |
AGAAGCCTCCAAGGTGAATT+AGG | 0.335922 | tig0018581:+131915 | None:intergenic |
CTTGTTCCTTTGGGTGGAAA+TGG | 0.343258 | tig0018581:-132734 | Msa1367980:CDS |
ATGCAGATTCGATGGTGTTC+TGG | 0.343933 | tig0018581:-132038 | Msa1367980:CDS |
ACAATTGACCTTTCTTTACT+TGG | 0.344982 | tig0018581:-130847 | Msa1367980:CDS |
GACAATCTCAATTTCTTCCT+TGG | 0.347743 | tig0018581:+131471 | None:intergenic |
ACCGCTTGAAGGACCGCTTC+TGG | 0.350997 | tig0018581:+132158 | None:intergenic |
TCTCGAATAAGTTGGTTTAT+GGG | 0.357035 | tig0018581:-131978 | Msa1367980:CDS |
AATGTCTTTGCAAATGAAAC+AGG | 0.359372 | tig0018581:+132653 | None:intergenic |
ATTTAATTGTTCAAGACATT+AGG | 0.360476 | tig0018581:-133420 | Msa1367980:five_prime_UTR |
ATGGCGAGACGTGGAAGTTT+AGG | 0.367612 | tig0018581:-132505 | Msa1367980:CDS |
CATGCCAGCAGGAGTACTTT+CGG | 0.368965 | tig0018581:+131356 | None:intergenic |
TCATTATGGTCTTCCGATAT+CGG | 0.371359 | tig0018581:-131316 | Msa1367980:CDS |
CATGAGGATCCATTACCATT+AGG | 0.376847 | tig0018581:-132317 | Msa1367980:CDS |
CTCTCACTAGAGGAGCGTTT+TGG | 0.379568 | tig0018581:+130967 | None:intergenic |
CTGGCTCCCTGCATGCCAGC+AGG | 0.380532 | tig0018581:+131345 | None:intergenic |
TTCTTCCTTGGTTGTGAGAA+AGG | 0.380986 | tig0018581:+131483 | None:intergenic |
CGCGGTTATCCTTATACCAT+TGG | 0.383301 | tig0018581:+130941 | None:intergenic |
TGAGAGTTTCCAATGGTATA+AGG | 0.391430 | tig0018581:-130950 | Msa1367980:CDS |
CCGCTAAAGTTACCGCTTGA+AGG | 0.392870 | tig0018581:+132147 | None:intergenic |
CTGCTGGCATGCAGGGAGCC+AGG | 0.396598 | tig0018581:-131344 | Msa1367980:CDS |
AACTTGCTTCCGTTTCTTCG+CGG | 0.399377 | tig0018581:+130923 | None:intergenic |
AGTTTGTTGATCCCCTTCTC+TGG | 0.400220 | tig0018581:-131938 | Msa1367980:CDS |
AACTCAGGCGCGAATATGAC+TGG | 0.403386 | tig0018581:-132197 | Msa1367980:CDS |
AATCACAAGAAGCTTCTTGC+CGG | 0.403468 | tig0018581:-132422 | Msa1367980:CDS |
TAAAAGTAAACAAAAGTCAT+TGG | 0.409037 | tig0018581:-133920 | Msa1367980:five_prime_UTR |
GCTGTACAAAATTGAAAGAA+TGG | 0.416647 | tig0018581:+130474 | None:intergenic |
AAGGAGGTTGACTATTCTAA+TGG | 0.418815 | tig0018581:-130512 | Msa1367980:CDS |
GGAGCCAGGCATGCTCATTA+TGG | 0.423939 | tig0018581:-131330 | Msa1367980:CDS |
TTTCGGGTAGACAACGGAAT+AGG | 0.433921 | tig0018581:+131373 | None:intergenic |
TGGTATTTCCATCTGATGAA+TGG | 0.434165 | tig0018581:+131046 | None:intergenic |
GGCTAATAAGCAACCGTTTG+AGG | 0.435944 | tig0018581:-132126 | Msa1367980:CDS |
CCAACAGGATTCCACCCTAA+TGG | 0.436228 | tig0018581:+132302 | None:intergenic |
ATCCTCCATTGAGCAATAGA+AGG | 0.439586 | tig0018581:-130440 | Msa1367980:three_prime_UTR |
AGAAAGCTGGCAGACATGTT+TGG | 0.443426 | tig0018581:-130805 | Msa1367980:CDS |
TCAAAGTTTATAATATAAGA+AGG | 0.445346 | tig0018581:+133684 | None:intergenic |
GTGCTCTACCGTGATATATC+TGG | 0.445579 | tig0018581:-130754 | Msa1367980:CDS |
GGAATCAAAGGTGAAACCTT+TGG | 0.447087 | tig0018581:+132824 | None:intergenic |
TACACAGAATGAGAATCAAA+TGG | 0.448127 | tig0018581:-132255 | Msa1367980:CDS |
ATGAGGATCCATTACCATTA+GGG | 0.450034 | tig0018581:-132316 | Msa1367980:CDS |
TCTGGCCTAATTCACCTTGG+AGG | 0.451766 | tig0018581:-131920 | Msa1367980:CDS |
TCTCCACCTCAGTAAAGTTC+AGG | 0.453129 | tig0018581:-131292 | Msa1367980:CDS |
ACACAGAATGAGAATCAAAT+GGG | 0.454771 | tig0018581:-132254 | Msa1367980:CDS |
TAAGGATAACCGCGAAGAAA+CGG | 0.457301 | tig0018581:-130932 | Msa1367980:CDS |
ATGATCAAAAGGCACGAAAC+CGG | 0.458029 | tig0018581:+131254 | None:intergenic |
GTCATTAGAGATTTGTTGCT+CGG | 0.460103 | tig0018581:+131068 | None:intergenic |
GTTTGTGATTCTTACCTGAA+TGG | 0.461365 | tig0018581:+130706 | None:intergenic |
GATGGAAATACCAATAAAAT+GGG | 0.463679 | tig0018581:-131036 | Msa1367980:CDS |
CTGAGGTGGAGATCCGATAT+CGG | 0.464440 | tig0018581:+131303 | None:intergenic |
AGAGAGAGACAGTTTATGGA+TGG | 0.465484 | tig0018581:+133807 | None:intergenic |
ATGCCAGCAGGAGTACTTTC+GGG | 0.465859 | tig0018581:+131357 | None:intergenic |
TGGGATTCGACGAGCGAAGA+AGG | 0.469310 | tig0018581:-132354 | Msa1367980:CDS |
CACTGAAATTTGGCCGTCGA+GGG | 0.472008 | tig0018581:+131431 | None:intergenic |
GAACAATTAAATATCTCAAA+GGG | 0.478597 | tig0018581:+133431 | None:intergenic |
ATAGGTTGCTCTGACCTAGA+AGG | 0.479580 | tig0018581:+131391 | None:intergenic |
TGCATTGCCGCCTCTACTAA+AGG | 0.482510 | tig0018581:+132056 | None:intergenic |
CAACTATGGCATGCTTGTGC+AGG | 0.483052 | tig0018581:-132944 | Msa1367980:CDS |
GGATTCCACCCTAATGGTAA+TGG | 0.485472 | tig0018581:+132308 | None:intergenic |
ATCACAAGAAGCTTCTTGCC+GGG | 0.486243 | tig0018581:-132421 | Msa1367980:CDS |
AAGTACTCCTGCTGGCATGC+AGG | 0.486614 | tig0018581:-131352 | Msa1367980:CDS |
AAAATGGTGATCTTTGTGTT+GGG | 0.488407 | tig0018581:-132373 | Msa1367980:CDS |
TTAATAGATAAAACTTTGCA+TGG | 0.488914 | tig0018581:+132803 | None:intergenic |
AGACGAATCCTCGGTTTCAA+AGG | 0.490672 | tig0018581:+131998 | None:intergenic |
CGACGAGCGAAGAAGGGTAT+TGG | 0.491306 | tig0018581:-132347 | Msa1367980:CDS |
TTCTCTGGCCTAATTCACCT+TGG | 0.492130 | tig0018581:-131923 | Msa1367980:CDS |
CCTTTGGGTGGAAATGGTAA+TGG | 0.496376 | tig0018581:-132728 | Msa1367980:CDS |
AAAACTTTGCATGGAATCAA+AGG | 0.504526 | tig0018581:+132812 | None:intergenic |
CTTAAGCTTGTTCCTTTGGG+TGG | 0.509650 | tig0018581:-132740 | Msa1367980:CDS |
ATTTACTGCAAAATGTAAGA+AGG | 0.509927 | tig0018581:-131560 | Msa1367980:CDS |
AGTTTAGCAGCATGATCAAA+AGG | 0.510146 | tig0018581:+131243 | None:intergenic |
CTCTGACCTAGAAGGTTACT+AGG | 0.513995 | tig0018581:+131399 | None:intergenic |
AAGTTTAGGCATATTTATAG+AGG | 0.517507 | tig0018581:-132491 | Msa1367980:CDS |
TGTCTCTTGCTTACTATCCA+TGG | 0.518182 | tig0018581:-131169 | Msa1367980:CDS |
TGAACAATTAAATATCTCAA+AGG | 0.519045 | tig0018581:+133430 | None:intergenic |
CCATTAGGGTGGAATCCTGT+TGG | 0.519653 | tig0018581:-132302 | Msa1367980:CDS |
GGAAGCAAGTTTGGAGAGTA+CGG | 0.521728 | tig0018581:-130911 | Msa1367980:CDS |
TGACTGGGAGGGAAAAGGTT+AGG | 0.521859 | tig0018581:-132181 | Msa1367980:CDS |
TAAACTTTACTGTTCACTGT+TGG | 0.522539 | tig0018581:+132905 | None:intergenic |
TGCCTCCTTCTATTGCTCAA+TGG | 0.523689 | tig0018581:+130435 | None:intergenic |
TGATGAACTGTACAGAAAGC+TGG | 0.523736 | tig0018581:-130818 | Msa1367980:CDS |
GGTGTTTAGATCCTCAACTA+TGG | 0.524660 | tig0018581:-132958 | Msa1367980:CDS |
GGGTAGTAAATAACCTCAAA+CGG | 0.525195 | tig0018581:+132113 | None:intergenic |
CATAAGATCCAAGTAAAGAA+AGG | 0.525657 | tig0018581:+130839 | None:intergenic |
ACGAGGAGTTCCCGAACCAT+CGG | 0.527122 | tig0018581:+131005 | None:intergenic |
GCCAAAATGTTCTGAAGAGG+AGG | 0.527805 | tig0018581:+132539 | None:intergenic |
TTCTGTGTAAACCAAGGAAG+AGG | 0.532226 | tig0018581:+132269 | None:intergenic |
GAATATGACTGGGAGGGAAA+AGG | 0.532595 | tig0018581:-132186 | Msa1367980:CDS |
ATGTAAGAAGGGTGAGTCCA+TGG | 0.533350 | tig0018581:-131548 | Msa1367980:CDS |
AGGATTCGTCTCGAATAAGT+TGG | 0.533362 | tig0018581:-131986 | Msa1367980:CDS |
GAAAATGGTGATCTTTGTGT+TGG | 0.533797 | tig0018581:-132374 | Msa1367980:CDS |
GAAAGAGATGATGGCCGACA+TGG | 0.534082 | tig0018581:+133759 | None:intergenic |
ACATTGGAGAGGAACCATTC+AGG | 0.535436 | tig0018581:-130720 | Msa1367980:intron |
TCTAATGACCATTCATCAGA+TGG | 0.537635 | tig0018581:-131054 | Msa1367980:CDS |
AGTACTCCTGCTGGCATGCA+GGG | 0.540145 | tig0018581:-131351 | Msa1367980:CDS |
AAGACCATAATGAGCATGCC+TGG | 0.540953 | tig0018581:+131326 | None:intergenic |
AATTCAAAGGAAAGAGATGA+TGG | 0.541265 | tig0018581:+133750 | None:intergenic |
GCATGCTTGTGCAGGTGGAA+TGG | 0.542227 | tig0018581:-132936 | Msa1367980:CDS |
CTCCTTCTATTGCTCAATGG+AGG | 0.544636 | tig0018581:+130438 | None:intergenic |
CCTTCAAGCGGTAACTTTAG+CGG | 0.549169 | tig0018581:-132147 | Msa1367980:CDS |
GCGAAGAAGGGTATTGGTGG+TGG | 0.550842 | tig0018581:-132341 | Msa1367980:CDS |
GGGATTCGACGAGCGAAGAA+GGG | 0.551807 | tig0018581:-132353 | Msa1367980:CDS |
AAAGTTTATTACTTTCCTCA+AGG | 0.553230 | tig0018581:-132890 | Msa1367980:CDS |
CTATGGCATGCTTGTGCAGG+TGG | 0.553241 | tig0018581:-132941 | Msa1367980:CDS |
CTACCCGAAAGTACTCCTGC+TGG | 0.554091 | tig0018581:-131360 | Msa1367980:CDS |
TGTGAAGGCGCCTTTAGTAG+AGG | 0.555008 | tig0018581:-132066 | Msa1367980:CDS |
AAGGTGAATTAGGCCAGAGA+AGG | 0.557096 | tig0018581:+131925 | None:intergenic |
TTGAGGTGGATTCAATTCAA+AGG | 0.559448 | tig0018581:+133737 | None:intergenic |
TAACTTCATGAATTGTCCAA+AGG | 0.561840 | tig0018581:-132840 | Msa1367980:CDS |
AATAACAATGGTTTGAACTC+AGG | 0.561882 | tig0018581:-132212 | Msa1367980:CDS |
AACTCTGGCGTACTTGCGCG+AGG | 0.565767 | tig0018581:+132092 | None:intergenic |
TTTACTGCAAAATGTAAGAA+GGG | 0.567494 | tig0018581:-131559 | Msa1367980:CDS |
TTAGCCAAAATGTTCTGAAG+AGG | 0.569408 | tig0018581:+132536 | None:intergenic |
GCACTGAAATTTGGCCGTCG+AGG | 0.570322 | tig0018581:+131430 | None:intergenic |
CCATTACCATTTCCACCCAA+AGG | 0.573446 | tig0018581:+132728 | None:intergenic |
CAAGATGGCCTTTGAAACCG+AGG | 0.577088 | tig0018581:-132006 | Msa1367980:CDS |
CGAGCGAAGAAGGGTATTGG+TGG | 0.577713 | tig0018581:-132344 | Msa1367980:CDS |
GCTACTAATTCAACCAACCA+TGG | 0.579195 | tig0018581:+131531 | None:intergenic |
ATTCATCAGAAGAAGTTGAA+AGG | 0.580416 | tig0018581:-132979 | Msa1367980:CDS |
AGGTGAATTAGGCCAGAGAA+GGG | 0.583510 | tig0018581:+131926 | None:intergenic |
ATTAACAACAACAATAACAA+TGG | 0.588569 | tig0018581:-132224 | Msa1367980:CDS |
CACCTCAGTAAAGTTCAGGC+AGG | 0.589149 | tig0018581:-131288 | Msa1367980:CDS |
TATGATCACACAGTAACCGC+TGG | 0.589638 | tig0018581:+133217 | None:intergenic |
CTGCCTGAACTTTACTGAGG+TGG | 0.589800 | tig0018581:+131289 | None:intergenic |
AAAGGTGAAAGGTTTATGGA+TGG | 0.590026 | tig0018581:+131501 | None:intergenic |
CTGAAATTTGGCCGTCGAGG+GGG | 0.590791 | tig0018581:+131433 | None:intergenic |
TCAAAAGGCACGAAACCGGC+CGG | 0.591651 | tig0018581:+131258 | None:intergenic |
GGCGCCTTCACACAAAACTC+TGG | 0.592521 | tig0018581:+132077 | None:intergenic |
CAGGCAGGTCTATTTCCGGC+CGG | 0.592530 | tig0018581:-131273 | Msa1367980:CDS |
GTAGTCAAAAGATGCCGCCT+CGG | 0.596640 | tig0018581:+132464 | None:intergenic |
AAGATGTTCATGGCGAGACG+TGG | 0.596686 | tig0018581:-132514 | Msa1367980:CDS |
AGGCGGCAATGCAGATTCGA+TGG | 0.597819 | tig0018581:-132046 | Msa1367980:CDS |
TCTGATGCTAACAATGGTGG+AGG | 0.600675 | tig0018581:-132623 | Msa1367980:CDS |
GTTACCTGAAGAAGCCTCCA+AGG | 0.601497 | tig0018581:+131906 | None:intergenic |
GCTGCAGATTATGACACTGT+TGG | 0.602356 | tig0018581:-132698 | Msa1367980:CDS |
TTCTGGAATAAGATTCAAGA+TGG | 0.603114 | tig0018581:-132021 | Msa1367980:CDS |
GGGTATTGGTGGTGGACATG+AGG | 0.604425 | tig0018581:-132333 | Msa1367980:CDS |
TAGAAAAGAGAATCTTGAGG+TGG | 0.605921 | tig0018581:+133723 | None:intergenic |
TTCTCATTCTGTGTAAACCA+AGG | 0.607875 | tig0018581:+132263 | None:intergenic |
GCAGATTATGACACTGTTGG+AGG | 0.608851 | tig0018581:-132695 | Msa1367980:CDS |
TGGCCGAAAAGAACAAGCTG+AGG | 0.609518 | tig0018581:+131102 | None:intergenic |
TTGGTTGTGAGAAAGGTGAA+AGG | 0.610407 | tig0018581:+131490 | None:intergenic |
CAATCTGATGCTAACAATGG+TGG | 0.611120 | tig0018581:-132626 | Msa1367980:CDS |
GCATGTTCAGCATGACCTTG+AGG | 0.617891 | tig0018581:+132875 | None:intergenic |
TCACAAGAAGCTTCTTGCCG+GGG | 0.620934 | tig0018581:-132420 | Msa1367980:CDS |
TCTGGAGCAGTCAAACACAT+TGG | 0.623032 | tig0018581:-130736 | Msa1367980:CDS |
ACTTATTCGAGACGAATCCT+CGG | 0.623357 | tig0018581:+131989 | None:intergenic |
AATGTTCTGAAGAGGAGGGT+CGG | 0.624657 | tig0018581:+132544 | None:intergenic |
AGACTGAGTAGAACTTGCCA+TGG | 0.625027 | tig0018581:+131152 | None:intergenic |
GCACAAGCATGCCATAGTTG+AGG | 0.626456 | tig0018581:+132947 | None:intergenic |
ATTTAGAAAAGAGAATCTTG+AGG | 0.626510 | tig0018581:+133720 | None:intergenic |
GGTAAGACTTGTTGATGACG+AGG | 0.626525 | tig0018581:+130988 | None:intergenic |
ACTGAAATTTGGCCGTCGAG+GGG | 0.629416 | tig0018581:+131432 | None:intergenic |
TCTCTGCACTGCATCCATGT+CGG | 0.630976 | tig0018581:-133773 | Msa1367980:five_prime_UTR |
TTTCCCTCGTTTGGATTACG+CGG | 0.631927 | tig0018581:-132567 | Msa1367980:CDS |
AGGATCCATTACCATTAGGG+TGG | 0.632365 | tig0018581:-132313 | Msa1367980:CDS |
GCCAGAAGCGGTCCTTCAAG+CGG | 0.635688 | tig0018581:-132159 | Msa1367980:CDS |
TTTCTCGAATCAGAAGATGT+CGG | 0.638567 | tig0018581:-130874 | Msa1367980:CDS |
GGCTGATCCTGAAACAGATG+AGG | 0.642209 | tig0018581:-132774 | Msa1367980:CDS |
TCGAATCAGAAGATGTCGGT+CGG | 0.645828 | tig0018581:-130870 | Msa1367980:CDS |
CTCCATTGAGCAATAGAAGG+AGG | 0.646560 | tig0018581:-130437 | Msa1367980:three_prime_UTR |
ACTCAGGCGCGAATATGACT+GGG | 0.647010 | tig0018581:-132196 | Msa1367980:CDS |
AGGCGCGAATATGACTGGGA+GGG | 0.648683 | tig0018581:-132192 | Msa1367980:CDS |
TTTCACCTTTCTCACAACCA+AGG | 0.649147 | tig0018581:-131488 | Msa1367980:CDS |
GGAAAAGGTTAGGCCAGAAG+CGG | 0.650274 | tig0018581:-132171 | Msa1367980:CDS |
AAGAGAAGCAGTGAGCAACT+GGG | 0.655135 | tig0018581:-133291 | Msa1367980:five_prime_UTR |
TGACTGCTCCAGATATATCA+CGG | 0.657225 | tig0018581:+130746 | None:intergenic |
CCAAAATGTTCTGAAGAGGA+GGG | 0.662547 | tig0018581:+132540 | None:intergenic |
ATCGTCTCAGCACAATACCT+AGG | 0.664599 | tig0018581:+132590 | None:intergenic |
CCATTGGAAACTCTCACTAG+AGG | 0.665637 | tig0018581:+130957 | None:intergenic |
CCTCTAGTGAGAGTTTCCAA+TGG | 0.667381 | tig0018581:-130957 | Msa1367980:CDS |
ACTCAATCTGATGCTAACAA+TGG | 0.675509 | tig0018581:-132629 | Msa1367980:CDS |
ACTCTGGCGTACTTGCGCGA+GGG | 0.681238 | tig0018581:+132093 | None:intergenic |
AAGAAGGGTGAGTCCATGGT+TGG | 0.682554 | tig0018581:-131544 | Msa1367980:CDS |
CAGGCGCGAATATGACTGGG+AGG | 0.684044 | tig0018581:-132193 | Msa1367980:CDS |
GAGTACTTTCGGGTAGACAA+CGG | 0.687017 | tig0018581:+131367 | None:intergenic |
ATTAGGTTATTAGAGACACT+AGG | 0.687638 | tig0018581:+131219 | None:intergenic |
GGATGGATGATGCAATGCAA+TGG | 0.688023 | tig0018581:+133824 | None:intergenic |
GGTGAATTAGGCCAGAGAAG+GGG | 0.693414 | tig0018581:+131927 | None:intergenic |
AGCAGTCAAACACATTGGAG+AGG | 0.695616 | tig0018581:-130731 | Msa1367980:CDS |
CGGCCGCGTAATCCAAACGA+GGG | 0.702235 | tig0018581:+132564 | None:intergenic |
AGAAGGTTACTAGGAAACGA+TGG | 0.704217 | tig0018581:+131408 | None:intergenic |
GAAGGCGCCTTTAGTAGAGG+CGG | 0.708805 | tig0018581:-132063 | Msa1367980:CDS |
CACAGAATGAGAATCAAATG+GGG | 0.710437 | tig0018581:-132253 | Msa1367980:CDS |
GGTCATGCTGAACATGCATG+TGG | 0.714823 | tig0018581:-132869 | Msa1367980:CDS |
TTTATAGAGGAACACCGAGG+CGG | 0.715637 | tig0018581:-132478 | Msa1367980:CDS |
GACCTGCCTGAACTTTACTG+AGG | 0.725533 | tig0018581:+131286 | None:intergenic |
TCGGCCGCGTAATCCAAACG+AGG | 0.730598 | tig0018581:+132563 | None:intergenic |
GTAACTTCACAAGAACAGCA+AGG | 0.734687 | tig0018581:-130531 | Msa1367980:CDS |
ACTTCACAAGAACAGCAAGG+AGG | 0.777122 | tig0018581:-130528 | Msa1367980:CDS |
ATATTTATAGAGGAACACCG+AGG | 0.862150 | tig0018581:-132481 | Msa1367980:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACATCAAATTTAATAAAATA+TGG | + | tig0018581:132369-132388 | None:intergenic | 10.0% |
!!! | AGTTTTTTTTTTTTTTTTTG+TGG | - | tig0018581:133935-133954 | Msa1367980:five_prime_UTR | 10.0% |
!! | ATAATATAAGAAGGAAAAAA+AGG | + | tig0018581:130558-130577 | None:intergenic | 15.0% |
!! | TCAAAGTTTATAATATAAGA+AGG | + | tig0018581:130567-130586 | None:intergenic | 15.0% |
!! | ATCAATTCTATTACTTAATT+TGG | - | tig0018581:131157-131176 | Msa1367980:CDS | 15.0% |
!! | TTTGAAGATGAATATATTTA+TGG | - | tig0018581:131219-131238 | Msa1367980:CDS | 15.0% |
!!! | AGTTTTATCTATTAAGTATA+TGG | - | tig0018581:131453-131472 | Msa1367980:CDS | 15.0% |
!! | AATTGCATAATACTTAAATA+TGG | - | tig0018581:132406-132425 | Msa1367980:CDS | 15.0% |
!! | TAAAAGTAAACAAAAGTCAT+TGG | - | tig0018581:130328-130347 | Msa1367980:three_prime_UTR | 20.0% |
!!! | CAGAACAGAATTTTTTTTTT+TGG | - | tig0018581:130742-130761 | Msa1367980:CDS | 20.0% |
!!! | AACAGAATTTTTTTTTTTGG+TGG | - | tig0018581:130745-130764 | Msa1367980:CDS | 20.0% |
!!! | ACAGAATTTTTTTTTTTGGT+GGG | - | tig0018581:130746-130765 | Msa1367980:CDS | 20.0% |
!!! | ATTTCAAATTTTGATGAACA+TGG | - | tig0018581:130788-130807 | Msa1367980:CDS | 20.0% |
!! | GAACAATTAAATATCTCAAA+GGG | + | tig0018581:130820-130839 | None:intergenic | 20.0% |
!! | TGAACAATTAAATATCTCAA+AGG | + | tig0018581:130821-130840 | None:intergenic | 20.0% |
!! | ATTTAATTGTTCAAGACATT+AGG | - | tig0018581:130828-130847 | Msa1367980:CDS | 20.0% |
!!! | TTTACTAGTCTTTTAATTCA+TGG | - | tig0018581:131093-131112 | Msa1367980:CDS | 20.0% |
!! | TTAATAGATAAAACTTTGCA+TGG | + | tig0018581:131448-131467 | None:intergenic | 20.0% |
!! | ATTAACAACAACAATAACAA+TGG | - | tig0018581:132024-132043 | Msa1367980:CDS | 20.0% |
!! | TCATTAATTTAGTAATCAAG+TGG | + | tig0018581:132504-132523 | None:intergenic | 20.0% |
!! | TTTGTATGATTTCATTTGAT+AGG | - | tig0018581:132587-132606 | Msa1367980:CDS | 20.0% |
!!! | GTAGTATTATGATATTTTGT+AGG | - | tig0018581:132647-132666 | Msa1367980:CDS | 20.0% |
!!! | ATGATATTTTGTAGGTTAAA+TGG | - | tig0018581:132655-132674 | Msa1367980:CDS | 20.0% |
!!! | TGATATTTTGTAGGTTAAAT+GGG | - | tig0018581:132656-132675 | Msa1367980:CDS | 20.0% |
!!! | TGATCTAATTTTTGAATGTT+TGG | - | tig0018581:133839-133858 | Msa1367980:five_prime_UTR | 20.0% |
!! | AAGCAAAGTTAAAAAAACAA+AGG | + | tig0018581:133893-133912 | None:intergenic | 20.0% |
! | ATTTAGAAAAGAGAATCTTG+AGG | + | tig0018581:130531-130550 | None:intergenic | 25.0% |
!! | TTTTCATTGTGTCAATGTTT+TGG | - | tig0018581:130852-130871 | Msa1367980:CDS | 25.0% |
! | AAAGTTTATTACTTTCCTCA+AGG | - | tig0018581:131358-131377 | Msa1367980:CDS | 25.0% |
! | AAGTTTAGGCATATTTATAG+AGG | - | tig0018581:131757-131776 | Msa1367980:intron | 25.0% |
! | ATTTCATTTGATAGGATCAT+AGG | - | tig0018581:132595-132614 | Msa1367980:CDS | 25.0% |
! | ATTTACTGCAAAATGTAAGA+AGG | - | tig0018581:132688-132707 | Msa1367980:CDS | 25.0% |
! | TTTACTGCAAAATGTAAGAA+GGG | - | tig0018581:132689-132708 | Msa1367980:CDS | 25.0% |
! | AGATGGAAATACCAATAAAA+TGG | - | tig0018581:133211-133230 | Msa1367980:exon | 25.0% |
! | GATGGAAATACCAATAAAAT+GGG | - | tig0018581:133212-133231 | Msa1367980:exon | 25.0% |
!! | GGAAAAATTACCCATTTTAT+TGG | + | tig0018581:133225-133244 | None:intergenic | 25.0% |
! | TGAAATGTATTGTGAAATTC+AGG | + | tig0018581:133576-133595 | None:intergenic | 25.0% |
!!! | AATAAGCATTGACTTATTTG+AGG | + | tig0018581:133677-133696 | None:intergenic | 25.0% |
AATTCAAAGGAAAGAGATGA+TGG | + | tig0018581:130501-130520 | None:intergenic | 30.0% | |
AAGAGAAGAAAAAGCAAGTA+GGG | + | tig0018581:130631-130650 | None:intergenic | 30.0% | |
!! | CTTCTCTTCATTTTTATGCT+TGG | - | tig0018581:130643-130662 | Msa1367980:intron | 30.0% |
!!! | TCTGTTCTGTTTTTTAACAG+AGG | + | tig0018581:130731-130750 | None:intergenic | 30.0% |
! | GTGATCATATATGACTTTTC+AGG | - | tig0018581:131045-131064 | Msa1367980:CDS | 30.0% |
!!! | ACTAGTCTTTTAATTCATGG+TGG | - | tig0018581:131096-131115 | Msa1367980:CDS | 30.0% |
ATTCATCAGAAGAAGTTGAA+AGG | - | tig0018581:131269-131288 | Msa1367980:CDS | 30.0% | |
TAAACTTTACTGTTCACTGT+TGG | + | tig0018581:131346-131365 | None:intergenic | 30.0% | |
TAACTTCATGAATTGTCCAA+AGG | - | tig0018581:131408-131427 | Msa1367980:CDS | 30.0% | |
AAAACTTTGCATGGAATCAA+AGG | + | tig0018581:131439-131458 | None:intergenic | 30.0% | |
AATGTCTTTGCAAATGAAAC+AGG | + | tig0018581:131598-131617 | None:intergenic | 30.0% | |
!!! | ATTTTGGCTAAAGATGTTCA+TGG | - | tig0018581:131724-131743 | Msa1367980:intron | 30.0% |
AAAATGGTGATCTTTGTGTT+GGG | - | tig0018581:131875-131894 | Msa1367980:intron | 30.0% | |
TACACAGAATGAGAATCAAA+TGG | - | tig0018581:131993-132012 | Msa1367980:CDS | 30.0% | |
ACACAGAATGAGAATCAAAT+GGG | - | tig0018581:131994-132013 | Msa1367980:CDS | 30.0% | |
AATAACAATGGTTTGAACTC+AGG | - | tig0018581:132036-132055 | Msa1367980:CDS | 30.0% | |
!! | TTCTGGAATAAGATTCAAGA+TGG | - | tig0018581:132227-132246 | Msa1367980:CDS | 30.0% |
!! | TCTCGAATAAGTTGGTTTAT+GGG | - | tig0018581:132270-132289 | Msa1367980:CDS | 30.0% |
! | AACAGAAGCACATTCTTAAA+TGG | + | tig0018581:132548-132567 | None:intergenic | 30.0% |
GAAATCATACAAAACTCAAC+TGG | + | tig0018581:132580-132599 | None:intergenic | 30.0% | |
! | CTTACATTTTGCAGTAAATC+TGG | + | tig0018581:132687-132706 | None:intergenic | 30.0% |
ATTAGGTTATTAGAGACACT+AGG | + | tig0018581:133032-133051 | None:intergenic | 30.0% | |
! | TGCTAGATTTTTGCATCATT+AGG | + | tig0018581:133049-133068 | None:intergenic | 30.0% |
! | AAAATGGGTAATTTTTCCGA+TGG | - | tig0018581:133227-133246 | Msa1367980:five_prime_UTR | 30.0% |
ACAATTGACCTTTCTTTACT+TGG | - | tig0018581:133401-133420 | Msa1367980:five_prime_UTR | 30.0% | |
CATAAGATCCAAGTAAAGAA+AGG | + | tig0018581:133412-133431 | None:intergenic | 30.0% | |
TGGCATAGAAAAATATGAGA+AGG | - | tig0018581:133463-133482 | Msa1367980:five_prime_UTR | 30.0% | |
ATGTATTGTGAAATTCAGGA+GGG | + | tig0018581:133572-133591 | None:intergenic | 30.0% | |
AATGTATTGTGAAATTCAGG+AGG | + | tig0018581:133573-133592 | None:intergenic | 30.0% | |
GCTGTACAAAATTGAAAGAA+TGG | + | tig0018581:133777-133796 | None:intergenic | 30.0% | |
! | TTCTTTCAATTTTGTACAGC+TGG | - | tig0018581:133777-133796 | Msa1367980:five_prime_UTR | 30.0% |
! | TTGAGGTGGATTCAATTCAA+AGG | + | tig0018581:130514-130533 | None:intergenic | 35.0% |
TAGAAAAGAGAATCTTGAGG+TGG | + | tig0018581:130528-130547 | None:intergenic | 35.0% | |
GAAGAGAAGAAAAAGCAAGT+AGG | + | tig0018581:130632-130651 | None:intergenic | 35.0% | |
! | TTCTGAATTTTGTTGACACG+TGG | - | tig0018581:130988-131007 | Msa1367980:CDS | 35.0% |
! | CAATTTTCTTCTTGTTCCAG+CGG | - | tig0018581:131015-131034 | Msa1367980:CDS | 35.0% |
GGACAATTCATGAAGTTAAC+AGG | + | tig0018581:131406-131425 | None:intergenic | 35.0% | |
! | TAAGCTTAAGCTTGTTCCTT+TGG | - | tig0018581:131504-131523 | Msa1367980:CDS | 35.0% |
! | AAGCTTAAGCTTGTTCCTTT+GGG | - | tig0018581:131505-131524 | Msa1367980:CDS | 35.0% |
ACTCAATCTGATGCTAACAA+TGG | - | tig0018581:131619-131638 | Msa1367980:intron | 35.0% | |
!! | TTAGCCAAAATGTTCTGAAG+AGG | + | tig0018581:131715-131734 | None:intergenic | 35.0% |
ATATTTATAGAGGAACACCG+AGG | - | tig0018581:131767-131786 | Msa1367980:intron | 35.0% | |
!! | TTCGATTGTGTTTTTGAGAG+CGG | - | tig0018581:131852-131871 | Msa1367980:intron | 35.0% |
GAAAATGGTGATCTTTGTGT+TGG | - | tig0018581:131874-131893 | Msa1367980:intron | 35.0% | |
ATGAGGATCCATTACCATTA+GGG | - | tig0018581:131932-131951 | Msa1367980:CDS | 35.0% | |
! | AGAGGAAAATTTTCTCCAAC+AGG | + | tig0018581:131964-131983 | None:intergenic | 35.0% |
! | GAGAAAATTTTCCTCTTCCT+TGG | - | tig0018581:131968-131987 | Msa1367980:CDS | 35.0% |
TTCTCATTCTGTGTAAACCA+AGG | + | tig0018581:131988-132007 | None:intergenic | 35.0% | |
CACAGAATGAGAATCAAATG+GGG | - | tig0018581:131995-132014 | Msa1367980:CDS | 35.0% | |
GGGTAGTAAATAACCTCAAA+CGG | + | tig0018581:132138-132157 | None:intergenic | 35.0% | |
!! | GTCTCGAATAAGTTGGTTTA+TGG | - | tig0018581:132269-132288 | Msa1367980:CDS | 35.0% |
TGGTTTATGGGAATTGTATC+TGG | - | tig0018581:132282-132301 | Msa1367980:CDS | 35.0% | |
AAAGGTGAAAGGTTTATGGA+TGG | + | tig0018581:132750-132769 | None:intergenic | 35.0% | |
TGAGAAAGGTGAAAGGTTTA+TGG | + | tig0018581:132754-132773 | None:intergenic | 35.0% | |
GACAATCTCAATTTCTTCCT+TGG | + | tig0018581:132780-132799 | None:intergenic | 35.0% | |
TCATTATGGTCTTCCGATAT+CGG | - | tig0018581:132932-132951 | Msa1367980:CDS | 35.0% | |
AGTTTAGCAGCATGATCAAA+AGG | + | tig0018581:133008-133027 | None:intergenic | 35.0% | |
!! | AAACCTCAGCTTGTTCTTTT+CGG | - | tig0018581:133143-133162 | Msa1367980:intron | 35.0% |
!! | GTCATTAGAGATTTGTTGCT+CGG | + | tig0018581:133183-133202 | None:intergenic | 35.0% |
TCTAATGACCATTCATCAGA+TGG | - | tig0018581:133194-133213 | Msa1367980:intron | 35.0% | |
TGGTATTTCCATCTGATGAA+TGG | + | tig0018581:133205-133224 | None:intergenic | 35.0% | |
TGAGAGTTTCCAATGGTATA+AGG | - | tig0018581:133298-133317 | Msa1367980:five_prime_UTR | 35.0% | |
TTTCTCGAATCAGAAGATGT+CGG | - | tig0018581:133374-133393 | Msa1367980:five_prime_UTR | 35.0% | |
GTTTGTGATTCTTACCTGAA+TGG | + | tig0018581:133545-133564 | None:intergenic | 35.0% | |
TCATATCTTTAGACCCTTTC+TGG | - | tig0018581:133596-133615 | Msa1367980:five_prime_UTR | 35.0% | |
CATATCTTTAGACCCTTTCT+GGG | - | tig0018581:133597-133616 | Msa1367980:five_prime_UTR | 35.0% | |
TTACGAAAACAACCCAGAAA+GGG | + | tig0018581:133612-133631 | None:intergenic | 35.0% | |
AAGGAGGTTGACTATTCTAA+TGG | - | tig0018581:133736-133755 | Msa1367980:five_prime_UTR | 35.0% | |
!!! | GTTAGTTTTCGTGTGTTGTG+TGG | - | tig0018581:130369-130388 | Msa1367980:three_prime_UTR | 40.0% |
! | TCATTGTGCGTGTATGCTTT+TGG | - | tig0018581:130394-130413 | Msa1367980:three_prime_UTR | 40.0% |
AGAGAGAGACAGTTTATGGA+TGG | + | tig0018581:130444-130463 | None:intergenic | 40.0% | |
AGAGAGAGAGAGACAGTTTA+TGG | + | tig0018581:130448-130467 | None:intergenic | 40.0% | |
!!! | GTGTCAATGTTTTGGAGACA+AGG | - | tig0018581:130860-130879 | Msa1367980:CDS | 40.0% |
GGTGTTTAGATCCTCAACTA+TGG | - | tig0018581:131290-131309 | Msa1367980:CDS | 40.0% | |
GGAATCAAAGGTGAAACCTT+TGG | + | tig0018581:131427-131446 | None:intergenic | 40.0% | |
GCATAAACCTCATCTGTTTC+AGG | + | tig0018581:131484-131503 | None:intergenic | 40.0% | |
CAATCTGATGCTAACAATGG+TGG | - | tig0018581:131622-131641 | Msa1367980:intron | 40.0% | |
!! | CCAAAATGTTCTGAAGAGGA+GGG | + | tig0018581:131711-131730 | None:intergenic | 40.0% |
AATCACAAGAAGCTTCTTGC+CGG | - | tig0018581:131826-131845 | Msa1367980:intron | 40.0% | |
CAAAAACACAATCGAATCCC+CGG | + | tig0018581:131848-131867 | None:intergenic | 40.0% | |
!! | GTGTTTTTGAGAGCGGAAAA+TGG | - | tig0018581:131859-131878 | Msa1367980:intron | 40.0% |
CATGAGGATCCATTACCATT+AGG | - | tig0018581:131931-131950 | Msa1367980:CDS | 40.0% | |
TTCTGTGTAAACCAAGGAAG+AGG | + | tig0018581:131982-132001 | None:intergenic | 40.0% | |
ACTTATTCGAGACGAATCCT+CGG | + | tig0018581:132262-132281 | None:intergenic | 40.0% | |
AGGATTCGTCTCGAATAAGT+TGG | - | tig0018581:132262-132281 | Msa1367980:CDS | 40.0% | |
GCTACTAATTCAACCAACCA+TGG | + | tig0018581:132720-132739 | None:intergenic | 40.0% | |
TTGGTTGTGAGAAAGGTGAA+AGG | + | tig0018581:132761-132780 | None:intergenic | 40.0% | |
TTTCACCTTTCTCACAACCA+AGG | - | tig0018581:132760-132779 | Msa1367980:CDS | 40.0% | |
TTCTTCCTTGGTTGTGAGAA+AGG | + | tig0018581:132768-132787 | None:intergenic | 40.0% | |
! | GAAACGATGGCACTGAAATT+TGG | + | tig0018581:132830-132849 | None:intergenic | 40.0% |
AGAAGGTTACTAGGAAACGA+TGG | + | tig0018581:132843-132862 | None:intergenic | 40.0% | |
TCGTTTCCTAGTAACCTTCT+AGG | - | tig0018581:132843-132862 | Msa1367980:CDS | 40.0% | |
! | ATGATCAAAAGGCACGAAAC+CGG | + | tig0018581:132997-133016 | None:intergenic | 40.0% |
TGTCTCTTGCTTACTATCCA+TGG | - | tig0018581:133079-133098 | Msa1367980:intron | 40.0% | |
!!! | GTTGCTCGGTGAGAATTTTT+TGG | + | tig0018581:133169-133188 | None:intergenic | 40.0% |
! | GGGTAATTTTTCCGATGGTT+CGG | - | tig0018581:133232-133251 | Msa1367980:five_prime_UTR | 40.0% |
! | GGTAATTTTTCCGATGGTTC+GGG | - | tig0018581:133233-133252 | Msa1367980:five_prime_UTR | 40.0% |
TAAGGATAACCGCGAAGAAA+CGG | - | tig0018581:133316-133335 | Msa1367980:five_prime_UTR | 40.0% | |
TGATGAACTGTACAGAAAGC+TGG | - | tig0018581:133430-133449 | Msa1367980:five_prime_UTR | 40.0% | |
TGACTGCTCCAGATATATCA+CGG | + | tig0018581:133505-133524 | None:intergenic | 40.0% | |
CTTACGAAAACAACCCAGAA+AGG | + | tig0018581:133613-133632 | None:intergenic | 40.0% | |
GTAACTTCACAAGAACAGCA+AGG | - | tig0018581:133717-133736 | Msa1367980:five_prime_UTR | 40.0% | |
ATCCTCCATTGAGCAATAGA+AGG | - | tig0018581:133808-133827 | Msa1367980:five_prime_UTR | 40.0% | |
GGATGGATGATGCAATGCAA+TGG | + | tig0018581:130427-130446 | None:intergenic | 45.0% | |
AAGAGAAGCAGTGAGCAACT+GGG | - | tig0018581:130957-130976 | Msa1367980:CDS | 45.0% | |
TATGATCACACAGTAACCGC+TGG | + | tig0018581:131034-131053 | None:intergenic | 45.0% | |
! | CTTAAGCTTGTTCCTTTGGG+TGG | - | tig0018581:131508-131527 | Msa1367980:CDS | 45.0% |
CTTGTTCCTTTGGGTGGAAA+TGG | - | tig0018581:131514-131533 | Msa1367980:CDS | 45.0% | |
CCATTACCATTTCCACCCAA+AGG | + | tig0018581:131523-131542 | None:intergenic | 45.0% | |
CCTTTGGGTGGAAATGGTAA+TGG | - | tig0018581:131520-131539 | Msa1367980:CDS | 45.0% | |
GCTGCAGATTATGACACTGT+TGG | - | tig0018581:131550-131569 | Msa1367980:CDS | 45.0% | |
GCAGATTATGACACTGTTGG+AGG | - | tig0018581:131553-131572 | Msa1367980:CDS | 45.0% | |
TCTGATGCTAACAATGGTGG+AGG | - | tig0018581:131625-131644 | Msa1367980:intron | 45.0% | |
! | GTGGAGGTTTTTCTGTTCCT+AGG | - | tig0018581:131641-131660 | Msa1367980:intron | 45.0% |
ATCGTCTCAGCACAATACCT+AGG | + | tig0018581:131661-131680 | None:intergenic | 45.0% | |
! | TGAGACGATTTTCCCTCGTT+TGG | - | tig0018581:131672-131691 | Msa1367980:intron | 45.0% |
TTTCCCTCGTTTGGATTACG+CGG | - | tig0018581:131681-131700 | Msa1367980:intron | 45.0% | |
!! | AATGTTCTGAAGAGGAGGGT+CGG | + | tig0018581:131707-131726 | None:intergenic | 45.0% |
! | CCCTCCTCTTCAGAACATTT+TGG | - | tig0018581:131708-131727 | Msa1367980:intron | 45.0% |
!! | GCCAAAATGTTCTGAAGAGG+AGG | + | tig0018581:131712-131731 | None:intergenic | 45.0% |
TTTATAGAGGAACACCGAGG+CGG | - | tig0018581:131770-131789 | Msa1367980:intron | 45.0% | |
!! | GGCATCTTTTGACTACTGGT+TGG | - | tig0018581:131791-131810 | Msa1367980:intron | 45.0% |
ATCACAAGAAGCTTCTTGCC+GGG | - | tig0018581:131827-131846 | Msa1367980:intron | 45.0% | |
AGGATCCATTACCATTAGGG+TGG | - | tig0018581:131935-131954 | Msa1367980:CDS | 45.0% | |
GGATTCCACCCTAATGGTAA+TGG | + | tig0018581:131943-131962 | None:intergenic | 45.0% | |
GAATATGACTGGGAGGGAAA+AGG | - | tig0018581:132062-132081 | Msa1367980:CDS | 45.0% | |
CCTTCAAGCGGTAACTTTAG+CGG | - | tig0018581:132101-132120 | Msa1367980:CDS | 45.0% | |
GGCTAATAAGCAACCGTTTG+AGG | - | tig0018581:132122-132141 | Msa1367980:CDS | 45.0% | |
!! | TACGCCAGAGTTTTGTGTGA+AGG | - | tig0018581:132167-132186 | Msa1367980:CDS | 45.0% |
ATGCAGATTCGATGGTGTTC+TGG | - | tig0018581:132210-132229 | Msa1367980:CDS | 45.0% | |
AGACGAATCCTCGGTTTCAA+AGG | + | tig0018581:132253-132272 | None:intergenic | 45.0% | |
!! | AGTTTGTTGATCCCCTTCTC+TGG | - | tig0018581:132310-132329 | Msa1367980:CDS | 45.0% |
AGGTGAATTAGGCCAGAGAA+GGG | + | tig0018581:132325-132344 | None:intergenic | 45.0% | |
AAGGTGAATTAGGCCAGAGA+AGG | + | tig0018581:132326-132345 | None:intergenic | 45.0% | |
TTCTCTGGCCTAATTCACCT+TGG | - | tig0018581:132325-132344 | Msa1367980:CDS | 45.0% | |
AGAAGCCTCCAAGGTGAATT+AGG | + | tig0018581:132336-132355 | None:intergenic | 45.0% | |
ATGTAAGAAGGGTGAGTCCA+TGG | - | tig0018581:132700-132719 | Msa1367980:CDS | 45.0% | |
CTCTGACCTAGAAGGTTACT+AGG | + | tig0018581:132852-132871 | None:intergenic | 45.0% | |
ATAGGTTGCTCTGACCTAGA+AGG | + | tig0018581:132860-132879 | None:intergenic | 45.0% | |
! | TTTCGGGTAGACAACGGAAT+AGG | + | tig0018581:132878-132897 | None:intergenic | 45.0% |
! | GAGTACTTTCGGGTAGACAA+CGG | + | tig0018581:132884-132903 | None:intergenic | 45.0% |
AAGACCATAATGAGCATGCC+TGG | + | tig0018581:132925-132944 | None:intergenic | 45.0% | |
TCTCCACCTCAGTAAAGTTC+AGG | - | tig0018581:132956-132975 | Msa1367980:CDS | 45.0% | |
AGTTCAGGCAGGTCTATTTC+CGG | - | tig0018581:132971-132990 | Msa1367980:CDS | 45.0% | |
AGACTGAGTAGAACTTGCCA+TGG | + | tig0018581:133099-133118 | None:intergenic | 45.0% | |
!! | GGTAAGACTTGTTGATGACG+AGG | + | tig0018581:133263-133282 | None:intergenic | 45.0% |
CCATTGGAAACTCTCACTAG+AGG | + | tig0018581:133294-133313 | None:intergenic | 45.0% | |
CCTCTAGTGAGAGTTTCCAA+TGG | - | tig0018581:133291-133310 | Msa1367980:five_prime_UTR | 45.0% | |
CGCGGTTATCCTTATACCAT+TGG | + | tig0018581:133310-133329 | None:intergenic | 45.0% | |
! | AACTTGCTTCCGTTTCTTCG+CGG | + | tig0018581:133328-133347 | None:intergenic | 45.0% |
CGAAGAAACGGAAGCAAGTT+TGG | - | tig0018581:133328-133347 | Msa1367980:five_prime_UTR | 45.0% | |
GGAAGCAAGTTTGGAGAGTA+CGG | - | tig0018581:133337-133356 | Msa1367980:five_prime_UTR | 45.0% | |
TCGAATCAGAAGATGTCGGT+CGG | - | tig0018581:133378-133397 | Msa1367980:five_prime_UTR | 45.0% | |
AGAAAGCTGGCAGACATGTT+TGG | - | tig0018581:133443-133462 | Msa1367980:five_prime_UTR | 45.0% | |
GTGCTCTACCGTGATATATC+TGG | - | tig0018581:133494-133513 | Msa1367980:five_prime_UTR | 45.0% | |
! | TCTGGAGCAGTCAAACACAT+TGG | - | tig0018581:133512-133531 | Msa1367980:five_prime_UTR | 45.0% |
AGCAGTCAAACACATTGGAG+AGG | - | tig0018581:133517-133536 | Msa1367980:five_prime_UTR | 45.0% | |
ACATTGGAGAGGAACCATTC+AGG | - | tig0018581:133528-133547 | Msa1367980:five_prime_UTR | 45.0% | |
ACTTCACAAGAACAGCAAGG+AGG | - | tig0018581:133720-133739 | Msa1367980:five_prime_UTR | 45.0% | |
CTCCTTCTATTGCTCAATGG+AGG | + | tig0018581:133813-133832 | None:intergenic | 45.0% | |
CTCCATTGAGCAATAGAAGG+AGG | - | tig0018581:133811-133830 | Msa1367980:five_prime_UTR | 45.0% | |
TGCCTCCTTCTATTGCTCAA+TGG | + | tig0018581:133816-133835 | None:intergenic | 45.0% | |
TCTCTGCACTGCATCCATGT+CGG | - | tig0018581:130475-130494 | Msa1367980:three_prime_UTR | 50.0% | |
! | GAAAGAGATGATGGCCGACA+TGG | + | tig0018581:130492-130511 | None:intergenic | 50.0% |
CAAGAGAAGCAGTGAGCAAC+TGG | - | tig0018581:130956-130975 | Msa1367980:CDS | 50.0% | |
GCACAAGCATGCCATAGTTG+AGG | + | tig0018581:131304-131323 | None:intergenic | 50.0% | |
CAACTATGGCATGCTTGTGC+AGG | - | tig0018581:131304-131323 | Msa1367980:CDS | 50.0% | |
GCATGTTCAGCATGACCTTG+AGG | + | tig0018581:131376-131395 | None:intergenic | 50.0% | |
GGTCATGCTGAACATGCATG+TGG | - | tig0018581:131379-131398 | Msa1367980:CDS | 50.0% | |
GGCTGATCCTGAAACAGATG+AGG | - | tig0018581:131474-131493 | Msa1367980:CDS | 50.0% | |
AAGATGTTCATGGCGAGACG+TGG | - | tig0018581:131734-131753 | Msa1367980:intron | 50.0% | |
ATGGCGAGACGTGGAAGTTT+AGG | - | tig0018581:131743-131762 | Msa1367980:intron | 50.0% | |
GTAGTCAAAAGATGCCGCCT+CGG | + | tig0018581:131787-131806 | None:intergenic | 50.0% | |
!! | AGGCGGCATCTTTTGACTAC+TGG | - | tig0018581:131787-131806 | Msa1367980:intron | 50.0% |
TCACAAGAAGCTTCTTGCCG+GGG | - | tig0018581:131828-131847 | Msa1367980:intron | 50.0% | |
CCAACAGGATTCCACCCTAA+TGG | + | tig0018581:131949-131968 | None:intergenic | 50.0% | |
CCATTAGGGTGGAATCCTGT+TGG | - | tig0018581:131946-131965 | Msa1367980:CDS | 50.0% | |
AACTCAGGCGCGAATATGAC+TGG | - | tig0018581:132051-132070 | Msa1367980:CDS | 50.0% | |
ACTCAGGCGCGAATATGACT+GGG | - | tig0018581:132052-132071 | Msa1367980:CDS | 50.0% | |
TGACTGGGAGGGAAAAGGTT+AGG | - | tig0018581:132067-132086 | Msa1367980:CDS | 50.0% | |
GGAAAAGGTTAGGCCAGAAG+CGG | - | tig0018581:132077-132096 | Msa1367980:CDS | 50.0% | |
CCGCTAAAGTTACCGCTTGA+AGG | + | tig0018581:132104-132123 | None:intergenic | 50.0% | |
!! | TGTGAAGGCGCCTTTAGTAG+AGG | - | tig0018581:132182-132201 | Msa1367980:CDS | 50.0% |
TGCATTGCCGCCTCTACTAA+AGG | + | tig0018581:132195-132214 | None:intergenic | 50.0% | |
!! | CAAGATGGCCTTTGAAACCG+AGG | - | tig0018581:132242-132261 | Msa1367980:CDS | 50.0% |
GGTGAATTAGGCCAGAGAAG+GGG | + | tig0018581:132324-132343 | None:intergenic | 50.0% | |
TCTGGCCTAATTCACCTTGG+AGG | - | tig0018581:132328-132347 | Msa1367980:CDS | 50.0% | |
TTCACCTTGGAGGCTTCTTC+AGG | - | tig0018581:132338-132357 | Msa1367980:CDS | 50.0% | |
GTTACCTGAAGAAGCCTCCA+AGG | + | tig0018581:132345-132364 | None:intergenic | 50.0% | |
AAGAAGGGTGAGTCCATGGT+TGG | - | tig0018581:132704-132723 | Msa1367980:CDS | 50.0% | |
ACTGAAATTTGGCCGTCGAG+GGG | + | tig0018581:132819-132838 | None:intergenic | 50.0% | |
CACTGAAATTTGGCCGTCGA+GGG | + | tig0018581:132820-132839 | None:intergenic | 50.0% | |
!! | ATGCCAGCAGGAGTACTTTC+GGG | + | tig0018581:132894-132913 | None:intergenic | 50.0% |
!! | CATGCCAGCAGGAGTACTTT+CGG | + | tig0018581:132895-132914 | None:intergenic | 50.0% |
CTGAGGTGGAGATCCGATAT+CGG | + | tig0018581:132948-132967 | None:intergenic | 50.0% | |
CTGCCTGAACTTTACTGAGG+TGG | + | tig0018581:132962-132981 | None:intergenic | 50.0% | |
CACCTCAGTAAAGTTCAGGC+AGG | - | tig0018581:132960-132979 | Msa1367980:CDS | 50.0% | |
GACCTGCCTGAACTTTACTG+AGG | + | tig0018581:132965-132984 | None:intergenic | 50.0% | |
TGGCCGAAAAGAACAAGCTG+AGG | + | tig0018581:133149-133168 | None:intergenic | 50.0% | |
!!! | CTCTCACTAGAGGAGCGTTT+TGG | + | tig0018581:133284-133303 | None:intergenic | 50.0% |
CTATGGCATGCTTGTGCAGG+TGG | - | tig0018581:131307-131326 | Msa1367980:CDS | 55.0% | |
GCATGCTTGTGCAGGTGGAA+TGG | - | tig0018581:131312-131331 | Msa1367980:CDS | 55.0% | |
TGGGATTCGACGAGCGAAGA+AGG | - | tig0018581:131894-131913 | Msa1367980:intron | 55.0% | |
GGGATTCGACGAGCGAAGAA+GGG | - | tig0018581:131895-131914 | Msa1367980:intron | 55.0% | |
! | CGACGAGCGAAGAAGGGTAT+TGG | - | tig0018581:131901-131920 | Msa1367980:intron | 55.0% |
!! | CGAGCGAAGAAGGGTATTGG+TGG | - | tig0018581:131904-131923 | Msa1367980:intron | 55.0% |
!! | GCGAAGAAGGGTATTGGTGG+TGG | - | tig0018581:131907-131926 | Msa1367980:intron | 55.0% |
!! | GGGTATTGGTGGTGGACATG+AGG | - | tig0018581:131915-131934 | Msa1367980:CDS | 55.0% |
AGGCGCGAATATGACTGGGA+GGG | - | tig0018581:132056-132075 | Msa1367980:CDS | 55.0% | |
GGCGCCTTCACACAAAACTC+TGG | + | tig0018581:132174-132193 | None:intergenic | 55.0% | |
!! | GAAGGCGCCTTTAGTAGAGG+CGG | - | tig0018581:132185-132204 | Msa1367980:CDS | 55.0% |
AGGCGGCAATGCAGATTCGA+TGG | - | tig0018581:132202-132221 | Msa1367980:CDS | 55.0% | |
ACGCGTAATGCACAGTGCGA+AGG | + | tig0018581:132468-132487 | None:intergenic | 55.0% | |
CTGAAATTTGGCCGTCGAGG+GGG | + | tig0018581:132818-132837 | None:intergenic | 55.0% | |
GCACTGAAATTTGGCCGTCG+AGG | + | tig0018581:132821-132840 | None:intergenic | 55.0% | |
!! | CTACCCGAAAGTACTCCTGC+TGG | - | tig0018581:132888-132907 | Msa1367980:CDS | 55.0% |
AAGTACTCCTGCTGGCATGC+AGG | - | tig0018581:132896-132915 | Msa1367980:CDS | 55.0% | |
AGTACTCCTGCTGGCATGCA+GGG | - | tig0018581:132897-132916 | Msa1367980:CDS | 55.0% | |
GGAGCCAGGCATGCTCATTA+TGG | - | tig0018581:132918-132937 | Msa1367980:CDS | 55.0% | |
! | TCAAAAGGCACGAAACCGGC+CGG | + | tig0018581:132993-133012 | None:intergenic | 55.0% |
ACGAGGAGTTCCCGAACCAT+CGG | + | tig0018581:133246-133265 | None:intergenic | 55.0% | |
CGGCCGCGTAATCCAAACGA+GGG | + | tig0018581:131687-131706 | None:intergenic | 60.0% | |
TCGGCCGCGTAATCCAAACG+AGG | + | tig0018581:131688-131707 | None:intergenic | 60.0% | |
CAGGCGCGAATATGACTGGG+AGG | - | tig0018581:132055-132074 | Msa1367980:CDS | 60.0% | |
GCCAGAAGCGGTCCTTCAAG+CGG | - | tig0018581:132089-132108 | Msa1367980:CDS | 60.0% | |
ACCGCTTGAAGGACCGCTTC+TGG | + | tig0018581:132093-132112 | None:intergenic | 60.0% | |
ACTCTGGCGTACTTGCGCGA+GGG | + | tig0018581:132158-132177 | None:intergenic | 60.0% | |
AACTCTGGCGTACTTGCGCG+AGG | + | tig0018581:132159-132178 | None:intergenic | 60.0% | |
TCGAGGGGGAAATCGTGGTG+TGG | + | tig0018581:132804-132823 | None:intergenic | 60.0% | |
CACCACGATTTCCCCCTCGA+CGG | - | tig0018581:132804-132823 | Msa1367980:CDS | 60.0% | |
CAGGCAGGTCTATTTCCGGC+CGG | - | tig0018581:132975-132994 | Msa1367980:CDS | 60.0% | |
GGCCGTCGAGGGGGAAATCG+TGG | + | tig0018581:132809-132828 | None:intergenic | 70.0% | |
CTGGCTCCCTGCATGCCAGC+AGG | + | tig0018581:132906-132925 | None:intergenic | 70.0% | |
CTGCTGGCATGCAGGGAGCC+AGG | - | tig0018581:132904-132923 | Msa1367980:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0018581 | gene | 130312 | 133958 | 130312 | ID=Msa1367980;Name=Msa1367980 |
tig0018581 | mRNA | 130312 | 133958 | 130312 | ID=Msa1367980-mRNA-1;Parent=Msa1367980;Name=Msa1367980-mRNA-1;_AED=0.00;_eAED=0.00;_QI=743|1|1|1|0.66|0.5|4|186|702 |
tig0018581 | exon | 130312 | 130552 | 130312 | ID=Msa1367980-mRNA-1:exon:273;Parent=Msa1367980-mRNA-1 |
tig0018581 | exon | 130721 | 131601 | 130721 | ID=Msa1367980-mRNA-1:exon:272;Parent=Msa1367980-mRNA-1 |
tig0018581 | exon | 131911 | 133071 | 131911 | ID=Msa1367980-mRNA-1:exon:271;Parent=Msa1367980-mRNA-1 |
tig0018581 | exon | 133204 | 133958 | 133204 | ID=Msa1367980-mRNA-1:exon:270;Parent=Msa1367980-mRNA-1 |
tig0018581 | five_prime_UTR | 133216 | 133958 | 133216 | ID=Msa1367980-mRNA-1:five_prime_utr;Parent=Msa1367980-mRNA-1 |
tig0018581 | CDS | 133204 | 133215 | 133204 | ID=Msa1367980-mRNA-1:cds;Parent=Msa1367980-mRNA-1 |
tig0018581 | CDS | 131911 | 133071 | 131911 | ID=Msa1367980-mRNA-1:cds;Parent=Msa1367980-mRNA-1 |
tig0018581 | CDS | 130721 | 131601 | 130721 | ID=Msa1367980-mRNA-1:cds;Parent=Msa1367980-mRNA-1 |
tig0018581 | CDS | 130498 | 130552 | 130498 | ID=Msa1367980-mRNA-1:cds;Parent=Msa1367980-mRNA-1 |
tig0018581 | three_prime_UTR | 130312 | 130497 | 130312 | ID=Msa1367980-mRNA-1:three_prime_utr;Parent=Msa1367980-mRNA-1 |
Gene Sequence |
Protein sequence |