AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1370480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1370480 MtrunA17_Chr4g0074001 93.462 520 31 2 1 520 1 517 0.0 947
Msa1370480 MtrunA17_Chr7g0218081 40.203 296 132 9 185 457 226 499 6.69e-50 179
Msa1370480 MtrunA17_Chr3g0101131 35.673 342 172 11 115 427 156 478 8.54e-48 174
Msa1370480 MtrunA17_Chr5g0445311 37.269 271 154 6 156 424 170 426 1.28e-47 173
Msa1370480 MtrunA17_Chr5g0445311 53.731 67 30 1 361 427 199 264 3.65e-15 78.2
Msa1370480 MtrunA17_Chr5g0418191 39.764 254 134 8 177 424 142 382 1.90e-47 170
Msa1370480 MtrunA17_Chr5g0418191 54.688 64 28 1 363 426 152 214 8.09e-16 79.7
Msa1370480 MtrunA17_Chr3g0106491 38.735 253 133 4 179 424 190 427 1.90e-45 166
Msa1370480 MtrunA17_Chr3g0106491 52.239 67 31 1 361 427 197 262 6.99e-16 80.5
Msa1370480 MtrunA17_Chr4g0042831 37.025 316 140 12 111 424 82 340 5.16e-45 162
Msa1370480 MtrunA17_Chr4g0042831 44.444 90 44 2 337 425 124 208 7.59e-13 70.1
Msa1370480 MtrunA17_Chr3g0079691 35.395 291 138 7 179 424 272 557 8.98e-45 167
Msa1370480 MtrunA17_Chr3g0079691 49.333 75 33 2 358 428 272 345 4.54e-16 81.3
Msa1370480 MtrunA17_Chr7g0249311 38.516 283 124 8 186 424 178 454 4.95e-44 165
Msa1370480 MtrunA17_Chr7g0249311 35.616 146 85 4 304 442 115 258 6.95e-17 84.0
Msa1370480 MtrunA17_Chr5g0432161 38.492 252 131 5 186 424 243 483 2.78e-43 162
Msa1370480 MtrunA17_Chr7g0263531 34.921 252 155 4 174 422 176 421 1.82e-42 157
Msa1370480 MtrunA17_Chr7g0263531 47.368 76 39 1 361 436 188 262 2.44e-17 84.3
Msa1370480 MtrunA17_Chr7g0243891 39.200 250 121 8 186 428 215 440 1.96e-41 156
Msa1370480 MtrunA17_Chr4g0004911 35.714 252 135 6 175 424 172 398 2.59e-37 144
Msa1370480 MtrunA17_Chr4g0004911 48.438 64 33 0 363 426 185 248 6.03e-15 77.4
Msa1370480 MtrunA17_Chr5g0447701 36.170 235 135 5 188 422 93 312 1.03e-36 140
Msa1370480 MtrunA17_Chr7g0249301 54.430 79 36 0 346 424 276 354 8.01e-26 108
Msa1370480 MtrunA17_Chr7g0249301 42.857 98 54 2 345 442 46 141 9.60e-16 79.0
Msa1370480 MtrunA17_Chr7g0249301 46.914 81 38 3 188 268 63 138 2.42e-12 68.6
Msa1370480 MtrunA17_Chr5g0447711 30.165 242 125 7 188 421 84 289 1.17e-23 101
Msa1370480 MtrunA17_Chr1g0150801 43.956 91 50 1 329 418 68 158 6.29e-22 92.8
Msa1370480 MtrunA17_Chr2g0294231 41.818 110 55 2 345 449 186 291 2.28e-21 95.9
Msa1370480 MtrunA17_Chr4g0051181 50.000 80 39 1 344 422 225 304 1.71e-20 94.4
Msa1370480 MtrunA17_Chr1g0188941 40.476 84 50 0 340 423 29 112 3.71e-20 85.9
Msa1370480 MtrunA17_Chr1g0194481 38.532 109 65 1 315 421 109 217 4.14e-20 91.3
Msa1370480 MtrunA17_Chr7g0216891 42.342 111 51 2 321 418 166 276 4.29e-20 93.6
Msa1370480 MtrunA17_Chr4g0051881 44.231 104 49 2 348 451 164 258 5.92e-20 91.3
Msa1370480 MtrunA17_Chr8g0335811 47.561 82 40 1 340 418 129 210 7.48e-20 88.6
Msa1370480 MtrunA17_Chr4g0060271 50.000 80 39 1 344 422 237 316 1.02e-19 92.8
Msa1370480 MtrunA17_Chr7g0270191 38.889 108 64 1 315 422 100 205 1.60e-19 89.0
Msa1370480 MtrunA17_Chr8g0383251 46.250 80 43 0 343 422 89 168 1.73e-19 86.3
Msa1370480 MtrunA17_Chr4g0053281 57.895 57 23 1 363 418 267 323 2.69e-19 89.4
Msa1370480 MtrunA17_Chr3g0129361 47.945 73 38 0 346 418 128 200 2.92e-19 86.7
Msa1370480 MtrunA17_Chr7g0270831 49.367 79 39 1 344 421 198 276 3.04e-19 90.1
Msa1370480 MtrunA17_Chr3g0099641 39.623 106 55 2 346 450 235 332 5.49e-19 89.7
Msa1370480 MtrunA17_Chr2g0288871 48.052 77 39 1 346 421 289 365 9.03e-19 89.4
Msa1370480 MtrunA17_Chr4g0075201 49.367 79 37 2 346 423 251 327 1.13e-18 89.0
Msa1370480 MtrunA17_Chr2g0302391 33.571 140 83 3 346 484 195 325 1.18e-18 88.6
Msa1370480 MtrunA17_Chr7g0224801 48.000 75 37 1 350 424 81 153 2.20e-18 82.8
Msa1370480 MtrunA17_Chr3g0129321 34.091 132 82 3 292 422 51 178 2.72e-18 83.6
Msa1370480 MtrunA17_Chr7g0238921 47.368 76 39 1 343 418 106 180 2.78e-18 85.9
Msa1370480 MtrunA17_Chr5g0401821 57.895 57 23 1 363 418 200 256 2.93e-18 85.1
Msa1370480 MtrunA17_Chr2g0322391 49.351 77 38 1 346 421 333 409 3.33e-18 87.8
Msa1370480 MtrunA17_Chr8g0383351 47.297 74 38 1 346 418 143 216 5.62e-18 83.2
Msa1370480 MtrunA17_Chr5g0418781 48.000 75 39 0 346 420 108 182 5.94e-18 84.3
Msa1370480 MtrunA17_Chr5g0443131 46.667 75 40 0 348 422 143 217 7.10e-18 84.7
Msa1370480 MtrunA17_Chr8g0386241 30.457 197 102 8 228 424 2 163 9.94e-18 81.3
Msa1370480 MtrunA17_Chr1g0147881 56.140 57 24 1 363 418 263 319 4.01e-17 82.8
Msa1370480 MtrunA17_Chr1g0184691 56.140 57 24 1 363 418 294 350 6.21e-17 82.4
Msa1370480 MtrunA17_Chr1g0202461 43.373 83 45 2 343 424 243 324 6.31e-17 82.8
Msa1370480 MtrunA17_Chr4g0068541 54.545 66 30 0 357 422 203 268 7.86e-17 82.8
Msa1370480 MtrunA17_Chr4g0025061 33.103 145 81 5 347 475 345 489 1.07e-16 83.2
Msa1370480 MtrunA17_Chr4g0071521 53.333 60 27 1 360 418 243 302 1.40e-16 80.9
Msa1370480 MtrunA17_Chr7g0228941 51.613 62 29 1 360 420 50 111 1.81e-16 75.9
Msa1370480 MtrunA17_Chr7g0248721 39.604 101 55 2 318 418 102 196 2.52e-16 78.2
Msa1370480 MtrunA17_Chr3g0136961 40.506 79 45 2 342 418 117 195 3.33e-16 79.3
Msa1370480 MtrunA17_Chr4g0001361 37.391 115 57 4 350 460 149 252 3.88e-16 79.3
Msa1370480 MtrunA17_Chr2g0319961 48.485 66 33 1 363 427 81 146 6.22e-16 77.8
Msa1370480 MtrunA17_Chr6g0485431 50.769 65 31 1 363 426 155 219 9.40e-16 79.0
Msa1370480 MtrunA17_Chr4g0025051 39.796 98 58 1 329 425 302 399 2.12e-15 79.0
Msa1370480 MtrunA17_Chr7g0270051 46.154 65 34 1 359 422 50 114 2.48e-15 76.3
Msa1370480 MtrunA17_Chr8g0379461 52.381 63 29 1 363 424 77 139 3.01e-15 75.5
Msa1370480 MtrunA17_Chr3g0139021 52.459 61 28 1 360 419 312 372 4.58e-15 77.0
Msa1370480 MtrunA17_Chr1g0150281 49.123 57 28 1 363 418 141 197 8.39e-15 75.1
Msa1370480 MtrunA17_Chr2g0333851 47.619 63 32 1 360 421 167 229 1.29e-14 75.1
Msa1370480 MtrunA17_Chr2g0289181 46.875 64 33 1 363 425 15 78 3.81e-14 72.0
Msa1370480 MtrunA17_Chr1g0150271 44.444 63 34 1 360 421 99 161 6.04e-14 72.0
Msa1370480 MtrunA17_Chr8g0348311 40.000 95 50 3 337 426 126 218 6.07e-14 73.2
Msa1370480 MtrunA17_Chr2g0284321 46.032 63 33 1 363 424 36 98 6.14e-14 71.2
Msa1370480 MtrunA17_Chr7g0248691 46.970 66 34 1 360 424 152 217 1.55e-13 71.6
Msa1370480 MtrunA17_Chr1g0189391 42.308 78 44 1 349 425 84 161 1.99e-13 71.6
Msa1370480 MtrunA17_Chr2g0293481 46.269 67 33 2 363 428 268 332 3.28e-13 72.0
Msa1370480 MtrunA17_Chr8g0387501 38.000 100 49 4 359 455 126 215 5.71e-13 69.3
Msa1370480 MtrunA17_Chr5g0432071 36.486 74 46 1 363 436 105 177 1.58e-11 63.9
Msa1370480 MtrunA17_Chr5g0432071 44.737 76 41 1 171 246 88 162 2.78e-11 63.2
Msa1370480 MtrunA17_Chr4g0024391 33.333 96 61 2 329 423 196 289 3.21e-11 65.5
Msa1370480 MtrunA17_Chr5g0419241 55.556 45 20 0 346 390 61 105 4.04e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1370480 AT4G30935.1 48.497 499 199 17 28 520 20 466 3.18e-123 369
Msa1370480 AT2G03340.1 34.278 353 189 11 92 424 148 477 8.75e-51 181
Msa1370480 AT1G13960.2 38.683 243 142 3 185 421 74 315 2.18e-48 171
Msa1370480 AT1G13960.1 34.132 334 202 8 94 421 147 468 6.56e-48 174
Msa1370480 AT4G26640.1 36.149 296 156 6 141 424 97 371 2.73e-47 171
Msa1370480 AT4G26640.1 52.239 67 31 1 360 426 137 202 1.04e-14 77.0
Msa1370480 AT4G26640.7 36.149 296 156 6 141 424 129 403 2.79e-47 172
Msa1370480 AT4G26640.7 52.239 67 31 1 360 426 169 234 9.30e-15 77.4
Msa1370480 AT4G26640.5 36.525 282 150 5 155 424 3 267 3.39e-47 169
Msa1370480 AT4G26640.5 52.239 67 31 1 360 426 33 98 1.10e-14 76.3
Msa1370480 AT4G26640.6 36.525 282 150 5 155 424 3 267 3.39e-47 169
Msa1370480 AT4G26640.6 52.239 67 31 1 360 426 33 98 1.10e-14 76.3
Msa1370480 AT4G26640.4 36.525 282 150 5 155 424 3 267 3.39e-47 169
Msa1370480 AT4G26640.4 52.239 67 31 1 360 426 33 98 1.10e-14 76.3
Msa1370480 AT4G26640.3 36.525 282 150 5 155 424 3 267 3.39e-47 169
Msa1370480 AT4G26640.3 52.239 67 31 1 360 426 33 98 1.10e-14 76.3
Msa1370480 AT4G26640.2 36.149 296 156 6 141 424 169 443 4.41e-47 172
Msa1370480 AT4G26640.2 52.239 67 31 1 360 426 209 274 9.40e-15 77.4
Msa1370480 AT2G38470.1 38.672 256 122 6 188 424 185 424 5.22e-44 163
Msa1370480 AT4G26440.1 37.546 269 129 9 185 424 176 434 2.29e-43 162
Msa1370480 AT4G26440.1 45.714 70 37 1 363 432 179 247 2.99e-13 72.8
Msa1370480 AT5G07100.1 40.816 245 83 9 186 429 116 299 1.32e-42 154
Msa1370480 AT5G07100.2 40.816 245 83 9 186 429 23 206 1.86e-42 151
Msa1370480 AT5G07100.4 40.816 245 83 9 186 429 23 206 1.86e-42 151
Msa1370480 AT5G07100.5 40.816 245 83 9 186 429 23 206 1.86e-42 151
Msa1370480 AT5G07100.3 40.816 245 83 9 186 429 23 206 1.86e-42 151
Msa1370480 AT2G04880.2 34.743 331 170 10 122 421 27 342 1.98e-42 157
Msa1370480 AT2G04880.1 32.948 346 180 10 122 421 27 366 2.84e-39 149
Msa1370480 AT2G04880.1 50.000 60 29 1 363 422 112 170 2.72e-12 69.3
Msa1370480 AT2G30250.1 34.375 256 125 5 186 426 165 392 2.98e-36 139
Msa1370480 AT2G30250.1 49.315 73 36 1 361 433 165 236 3.32e-12 68.6
Msa1370480 AT3G01080.2 35.565 239 114 6 185 421 203 403 1.73e-34 135
Msa1370480 AT3G01080.2 46.753 77 40 1 363 439 206 281 9.76e-15 77.0
Msa1370480 AT2G37260.3 36.965 257 123 8 186 418 84 325 1.23e-33 130
Msa1370480 AT2G37260.2 36.965 257 123 8 186 418 82 323 1.53e-33 130
Msa1370480 AT2G37260.1 36.965 257 123 8 186 418 164 405 2.08e-33 132
Msa1370480 AT5G56270.1 54.762 84 38 0 341 424 466 549 3.16e-25 110
Msa1370480 AT5G56270.1 51.515 66 31 1 363 428 274 338 3.40e-15 79.0
Msa1370480 AT5G56270.1 32.800 125 81 2 131 253 217 340 1.78e-12 70.5
Msa1370480 AT3G01080.1 58.667 75 31 0 347 421 291 365 1.90e-24 106
Msa1370480 AT3G01080.1 46.753 77 40 1 363 439 168 243 1.09e-14 76.6
Msa1370480 AT4G12020.10 35.922 206 110 7 187 382 468 661 3.30e-24 107
Msa1370480 AT4G12020.10 49.153 59 29 1 363 421 469 526 5.78e-12 69.3
Msa1370480 AT4G12020.6 35.922 206 110 7 187 382 468 661 3.56e-24 107
Msa1370480 AT4G12020.6 49.153 59 29 1 363 421 469 526 5.78e-12 69.3
Msa1370480 AT4G12020.8 35.922 206 110 7 187 382 468 661 3.56e-24 107
Msa1370480 AT4G12020.8 49.153 59 29 1 363 421 469 526 5.78e-12 69.3
Msa1370480 AT4G12020.2 35.922 206 110 7 187 382 468 661 3.59e-24 107
Msa1370480 AT4G12020.2 49.153 59 29 1 363 421 469 526 6.10e-12 69.3
Msa1370480 AT4G12020.3 35.922 206 110 7 187 382 468 661 3.65e-24 107
Msa1370480 AT4G12020.3 49.153 59 29 1 363 421 469 526 5.89e-12 69.3
Msa1370480 AT4G12020.4 35.922 206 110 7 187 382 468 661 3.82e-24 107
Msa1370480 AT4G12020.4 49.153 59 29 1 363 421 469 526 6.20e-12 69.3
Msa1370480 AT4G12020.7 35.922 206 110 7 187 382 468 661 4.05e-24 107
Msa1370480 AT4G12020.7 49.153 59 29 1 363 421 469 526 5.74e-12 69.3
Msa1370480 AT4G12020.1 35.922 206 110 7 187 382 468 661 4.16e-24 107
Msa1370480 AT4G12020.1 49.153 59 29 1 363 421 469 526 5.65e-12 69.3
Msa1370480 AT4G12020.9 35.922 206 110 7 187 382 468 661 4.16e-24 107
Msa1370480 AT4G12020.9 49.153 59 29 1 363 421 469 526 5.65e-12 69.3
Msa1370480 AT4G12020.5 35.922 206 110 7 187 382 401 594 4.37e-24 107
Msa1370480 AT4G12020.5 49.153 59 29 1 363 421 402 459 6.50e-12 68.9
Msa1370480 AT4G12020.11 35.922 206 110 7 187 382 468 661 9.45e-24 106
Msa1370480 AT4G12020.11 49.153 59 29 1 363 421 469 526 8.42e-12 68.6
Msa1370480 AT5G41570.1 44.211 95 50 1 324 418 63 154 4.05e-21 91.3
Msa1370480 AT1G55600.1 45.679 81 44 0 341 421 286 366 1.58e-20 95.1
Msa1370480 AT5G49520.1 42.105 95 54 1 346 439 205 299 2.51e-20 93.6
Msa1370480 AT1G69310.4 43.878 98 49 1 346 443 131 222 4.09e-20 91.3
Msa1370480 AT1G69310.2 43.878 98 49 1 346 443 131 222 4.09e-20 91.3
Msa1370480 AT1G69310.1 43.878 98 49 1 346 443 131 222 4.09e-20 91.3
Msa1370480 AT5G26170.1 54.839 62 28 0 357 418 108 169 1.18e-19 87.0
Msa1370480 AT2G23320.1 61.404 57 21 1 363 418 241 297 1.32e-19 90.1
Msa1370480 AT2G44745.1 43.023 86 49 0 333 418 116 201 1.65e-19 87.8
Msa1370480 AT5G13080.1 47.368 76 38 1 349 424 54 127 2.07e-19 85.5
Msa1370480 AT4G04450.2 43.689 103 49 3 346 447 182 276 2.83e-19 90.9
Msa1370480 AT5G15130.2 39.823 113 63 2 346 457 169 277 3.73e-19 90.9
Msa1370480 AT1G68150.1 47.619 84 43 1 340 422 213 296 4.03e-19 89.7
Msa1370480 AT5G15130.1 39.823 113 63 2 346 457 211 319 4.25e-19 90.9
Msa1370480 AT1G64000.1 48.571 70 36 0 349 418 101 170 4.65e-19 85.9
Msa1370480 AT2G24570.1 50.000 78 38 1 363 439 244 321 5.04e-19 88.6
Msa1370480 AT4G04450.1 43.689 103 49 3 346 447 276 370 6.23e-19 90.5
Msa1370480 AT4G18170.1 44.828 87 46 1 342 428 152 236 8.25e-19 87.8
Msa1370480 AT4G22070.4 49.351 77 38 1 346 421 281 357 8.88e-19 89.7
Msa1370480 AT4G22070.3 49.351 77 38 1 346 421 281 357 8.88e-19 89.7
Msa1370480 AT4G22070.2 49.351 77 38 1 346 421 281 357 8.88e-19 89.7
Msa1370480 AT4G22070.1 49.351 77 38 1 346 421 281 357 8.88e-19 89.7
Msa1370480 AT3G01970.1 48.571 70 36 0 349 418 52 121 1.12e-18 83.2
Msa1370480 AT4G24240.1 56.667 60 25 1 360 418 279 338 1.48e-18 87.8
Msa1370480 AT4G39410.1 49.315 73 37 0 346 418 207 279 1.69e-18 86.7
Msa1370480 AT4G01720.1 49.367 79 39 1 344 421 221 299 3.31e-18 87.8
Msa1370480 AT1G62300.1 49.367 79 37 2 346 423 296 372 4.14e-18 87.8
Msa1370480 AT3G04670.1 57.895 57 23 1 363 418 263 319 4.56e-18 85.9
Msa1370480 AT4G31550.2 58.621 58 23 1 363 419 246 303 5.16e-18 85.5
Msa1370480 AT4G31550.1 58.621 58 23 1 363 419 247 304 5.22e-18 85.5
Msa1370480 AT5G28650.1 57.895 57 23 1 363 418 263 319 1.03e-17 84.7
Msa1370480 AT5G43290.1 51.613 62 30 0 359 420 111 172 1.08e-17 84.0
Msa1370480 AT5G46350.1 33.333 156 84 5 325 470 139 284 1.09e-17 84.7
Msa1370480 AT2G47260.1 52.381 63 30 0 363 425 175 237 1.36e-17 84.7
Msa1370480 AT1G29860.1 46.988 83 40 2 363 443 137 217 1.78e-17 83.2
Msa1370480 AT5G64810.1 49.206 63 32 0 358 420 106 168 1.89e-17 81.3
Msa1370480 AT2G46130.1 46.053 76 41 0 343 418 11 86 2.38e-17 78.2
Msa1370480 AT3G62340.1 36.879 141 74 3 345 482 101 229 1.32e-16 80.5
Msa1370480 AT1G29280.1 48.529 68 34 1 356 422 68 135 5.15e-16 78.6
Msa1370480 AT1G18860.1 46.835 79 39 2 346 423 223 299 9.93e-16 80.5
Msa1370480 AT2G30590.1 52.632 57 26 1 363 418 314 370 1.34e-15 79.0
Msa1370480 AT1G69310.3 40.816 98 48 2 346 443 131 218 2.01e-15 77.4
Msa1370480 AT2G21900.1 49.153 59 30 0 363 421 110 168 3.44e-15 74.7
Msa1370480 AT3G01080.3 46.753 77 40 1 363 439 206 281 4.49e-15 77.0
Msa1370480 AT4G31800.2 45.000 60 32 1 363 421 112 171 1.49e-14 73.9
Msa1370480 AT5G52830.1 50.000 64 31 1 360 422 163 226 1.76e-14 75.5
Msa1370480 AT4G31800.1 45.000 60 32 1 363 421 177 236 2.01e-14 74.7
Msa1370480 AT4G23550.1 42.857 77 43 1 349 424 127 203 2.19e-14 74.7
Msa1370480 AT4G01250.1 45.000 80 40 3 349 427 116 192 4.40e-14 73.6
Msa1370480 AT2G25000.2 45.000 60 32 1 363 421 104 163 5.96e-14 72.0
Msa1370480 AT2G25000.4 45.000 60 32 1 363 421 104 163 5.96e-14 72.0
Msa1370480 AT1G80840.1 38.356 73 44 1 350 421 134 206 6.72e-14 73.2
Msa1370480 AT1G69810.2 45.570 79 41 2 346 422 129 207 8.33e-14 73.2
Msa1370480 AT1G69810.1 45.570 79 41 2 346 422 187 265 8.89e-14 73.6
Msa1370480 AT2G25000.3 45.000 60 32 1 363 421 126 185 1.19e-13 71.2
Msa1370480 AT3G58710.2 33.594 128 77 2 295 421 10 130 1.28e-13 71.6
Msa1370480 AT2G25000.1 45.000 60 32 1 363 421 147 206 1.40e-13 71.6
Msa1370480 AT3G58710.1 47.761 67 34 1 356 421 65 131 1.62e-13 71.2
Msa1370480 AT2G34830.1 43.421 76 39 3 354 428 208 280 1.67e-13 72.8
Msa1370480 AT2G34830.2 43.421 76 39 3 354 428 217 289 1.76e-13 72.8
Msa1370480 AT1G30650.1 43.056 72 39 2 354 424 210 280 1.06e-12 70.5
Msa1370480 AT2G46130.2 42.105 76 40 1 343 418 11 82 1.55e-12 64.3
Msa1370480 AT5G45050.1 45.588 68 34 2 361 427 1179 1244 3.03e-11 67.0
Msa1370480 AT5G45050.4 45.588 68 34 2 361 427 1040 1105 3.09e-11 66.6
Msa1370480 AT5G45050.2 45.588 68 34 2 361 427 1151 1216 3.10e-11 67.0

Find 135 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAACCGAATTCAGCGTATT+AGG 0.178386 tig0019129:-76027 None:intergenic
GGATTCAACTGGCGGAAATA+TGG 0.214937 tig0019129:+77399 Msa1370480:CDS
CCAAAGATGGAAAAGCAATT+AGG 0.223190 tig0019129:-75879 None:intergenic
GGTTGTCAAATCCGAAATTA+AGG 0.234424 tig0019129:+76044 Msa1370480:CDS
ACGCGGACTTGCCTTCGTTT+TGG 0.267382 tig0019129:-77804 None:intergenic
CAACCGAATTCAGCGTATTA+GGG 0.297461 tig0019129:-76026 None:intergenic
CAAAGATGGAAAAGCAATTA+GGG 0.304686 tig0019129:-75878 None:intergenic
AAATTATCTAACCTTAATTT+CGG 0.308223 tig0019129:-76055 None:intergenic
CCGGGGAAGCCAAGGACCTT+GGG 0.325495 tig0019129:+80205 Msa1370480:CDS
CGGCCTGAGCTGAAGGTTCC+TGG 0.331309 tig0019129:-77155 None:intergenic
GGATACCGATGGCGCAAGTA+TGG 0.334207 tig0019129:+78034 Msa1370480:CDS
AGGTGTTTCTTCTTGAGCTT+TGG 0.353643 tig0019129:-77691 None:intergenic
CGCAAACTTACTTTCCCTAA+TGG 0.358180 tig0019129:-77586 None:intergenic
GCGCAAGTATGGACAGAAAA+TGG 0.361245 tig0019129:+78045 Msa1370480:CDS
ACTCAACTGCAAATTATTCA+TGG 0.361645 tig0019129:-80115 None:intergenic
GCAGGAGATGTGGGGATATC+TGG 0.371320 tig0019129:+78007 Msa1370480:CDS
CAGGTTCTCGAAGCTATTAC+AGG 0.382750 tig0019129:+77448 Msa1370480:CDS
ACGGAAGATTAGTTCCATTA+GGG 0.383627 tig0019129:+77572 Msa1370480:CDS
GCCGGTCTCTTGTAATTTCA+CGG 0.389064 tig0019129:+80339 Msa1370480:three_prime_UTR
ATTGAATGCTGGGATCATTC+AGG 0.394765 tig0019129:+77501 Msa1370480:CDS
AGACATATTCTGTATTTGTA+TGG 0.407890 tig0019129:-77271 None:intergenic
CACGGAAGATTAGTTCCATT+AGG 0.408040 tig0019129:+77571 Msa1370480:CDS
TGCTGCATGTACAACAAACT+TGG 0.409694 tig0019129:-77987 None:intergenic
CCATCAGATGATGGTGTCCT+TGG 0.410812 tig0019129:-77378 None:intergenic
CCCAAGGTCCTTGGCTTCCC+CGG 0.414124 tig0019129:-80205 None:intergenic
GGTGGGCCGTGTCGTTTCTT+CGG 0.415960 tig0019129:-79997 None:intergenic
TTCTTGAGCTTTGGAAGATG+TGG 0.417147 tig0019129:-77682 None:intergenic
GTCTCAATGTGCTTTCGAAC+AGG 0.417742 tig0019129:-79907 None:intergenic
TGGGCACAGCAAATTATTCA+TGG 0.422354 tig0019129:-80055 None:intergenic
TGTCTTCTGTTTCTGTTCCA+AGG 0.425869 tig0019129:+77361 Msa1370480:CDS
ACCGGGGAAGCCAAGGACCT+TGG 0.430810 tig0019129:+80204 Msa1370480:CDS
AATCCCTAATACGCTGAATT+CGG 0.433253 tig0019129:+76023 Msa1370480:CDS
CTCTGCAGTCGGTTCGTTGG+AGG 0.433498 tig0019129:-77610 None:intergenic
ATCAGAAAATTTCTACTCAA+TGG 0.437791 tig0019129:+80157 Msa1370480:CDS
GGTGCTGCAGCAGCCACAAG+AGG 0.441768 tig0019129:-80027 None:intergenic
TTTCTGTGTCTAAGTTTCCA+TGG 0.447504 tig0019129:+75690 Msa1370480:exon
ATATTCTGTATTTGTATGGT+TGG 0.451171 tig0019129:-77267 None:intergenic
TTCCCCGGTTAGTTCTCCTT+CGG 0.452841 tig0019129:-80190 None:intergenic
TACTACAGATGCACTTCTGC+TGG 0.452929 tig0019129:+79880 Msa1370480:CDS
GTGGATGGATCAGAATCTTT+CGG 0.455352 tig0019129:-77663 None:intergenic
TGCTAAAAGAGAAGCTGTCC+AGG 0.461739 tig0019129:+77137 Msa1370480:CDS
GATTCAACTGGCGGAAATAT+GGG 0.464037 tig0019129:+77400 Msa1370480:CDS
TCTGTCCATACTTGCGCCAT+CGG 0.468804 tig0019129:-78039 None:intergenic
CGTTGATCCAAAACCAAAGA+TGG 0.472386 tig0019129:-75892 None:intergenic
AGAAGCTGAGTGGGTCCCAC+AGG 0.472843 tig0019129:-75739 None:intergenic
TAATTTGCAGTTGAGTAAAC+CGG 0.477622 tig0019129:+80122 Msa1370480:CDS
GTTCTCTGCAGTCGGTTCGT+TGG 0.479965 tig0019129:-77613 None:intergenic
GAATCTTTCGGAGCATTGAC+AGG 0.481035 tig0019129:-77651 None:intergenic
TGTATTTGTATGGTTGGACT+AGG 0.483789 tig0019129:-77261 None:intergenic
TCATCTGATATCAATGGTAA+TGG 0.485405 tig0019129:+77741 Msa1370480:CDS
GACACCGAAGGAGAACTAAC+CGG 0.487157 tig0019129:+80186 Msa1370480:CDS
GCTGACGGTGATTCGCCGAC+TGG 0.493066 tig0019129:-75799 None:intergenic
TGTCCAGGAACCTTCAGCTC+AGG 0.494745 tig0019129:+77152 Msa1370480:CDS
AAAGACCTTTACCTGGGATG+TGG 0.496114 tig0019129:-78079 None:intergenic
TCTGCAGTCGGTTCGTTGGA+GGG 0.497315 tig0019129:-77609 None:intergenic
TGCTAAGAAGATTGAATGCT+GGG 0.499049 tig0019129:+77491 Msa1370480:CDS
CATCATCTGATGGATTCAAC+TGG 0.499437 tig0019129:+77388 Msa1370480:CDS
CCCACCAAGTGCTCCTCTTG+TGG 0.499953 tig0019129:+80074 Msa1370480:CDS
TGCTGTCATCATAACTTACA+AGG 0.506337 tig0019129:+79948 Msa1370480:CDS
AAGTTTGTTGTACATGCAGC+AGG 0.506685 tig0019129:+77989 Msa1370480:CDS
CAGAAAGGAGAAAGGTGACT+TGG 0.514032 tig0019129:+77928 Msa1370480:intron
TCGTGTTTGTTGAATTTCCA+CGG 0.514282 tig0019129:-75610 None:intergenic
GGAACAAGTATAGAATTGAT+TGG 0.519243 tig0019129:+80485 Msa1370480:three_prime_UTR
CCCACCAAGTGCTCCTCTTG+TGG 0.523692 tig0019129:+80014 Msa1370480:CDS
ACACCGAAGGAGAACTAACC+GGG 0.523728 tig0019129:+80187 Msa1370480:CDS
GGGTCCCACAGGGAGAGCTT+CGG 0.524421 tig0019129:-75728 None:intergenic
CAAAACTCATCTGATATCAA+TGG 0.525848 tig0019129:+77735 Msa1370480:CDS
TGGACCTCTTGAAAATGAAA+AGG 0.527268 tig0019129:+77110 Msa1370480:CDS
TGCAAATTATTCATGGAGGC+AGG 0.533719 tig0019129:-80108 None:intergenic
AGCAAATTATTCATGGAGGC+AGG 0.536158 tig0019129:-80048 None:intergenic
GCCACAAGAGGAGCACTTGG+TGG 0.539995 tig0019129:-80015 None:intergenic
TTTGGTGATAGTTCAGATGG+TGG 0.547468 tig0019129:-77210 None:intergenic
ATTGGCATAATCTATTTACA+TGG 0.548102 tig0019129:+80503 Msa1370480:three_prime_UTR
TTTCATGCTCAGGAAACGGT+TGG 0.552316 tig0019129:+77090 Msa1370480:intron
TTCTGCGACTCGGTGGCTGA+CGG 0.553411 tig0019129:-75814 None:intergenic
GAATTTGGTGATAGTTCAGA+TGG 0.554364 tig0019129:-77213 None:intergenic
AGAACTAACCGGGGAAGCCA+AGG 0.555363 tig0019129:+80197 Msa1370480:CDS
GCCGTGAAATTACAAGAGAC+CGG 0.557742 tig0019129:-80340 None:intergenic
GCCACAAGAGGAGCACTTGG+TGG 0.560730 tig0019129:-80075 None:intergenic
TAATGGAACTAATCTTCCGT+GGG 0.563190 tig0019129:-77569 None:intergenic
TAGCTTCGAGAACCTGTAGT+AGG 0.565059 tig0019129:-77441 None:intergenic
CGGGGAAGCCAAGGACCTTG+GGG 0.569355 tig0019129:+80206 Msa1370480:CDS
GCAGCCACAAGAGGAGCACT+TGG 0.569920 tig0019129:-80018 None:intergenic
TAATATATAAATTAGATAGC+CGG 0.571026 tig0019129:+80321 Msa1370480:three_prime_UTR
CCACAAGAGGAGCACTTGGT+GGG 0.571996 tig0019129:-80074 None:intergenic
GACAGCATCTGAGTTGTCTA+CGG 0.572444 tig0019129:-79932 None:intergenic
CCAAGGACACCATCATCTGA+TGG 0.573655 tig0019129:+77378 Msa1370480:CDS
CAGTTGAATCCATCAGATGA+TGG 0.574887 tig0019129:-77387 None:intergenic
CAAGTTAAGAGTCCTACTAC+AGG 0.575076 tig0019129:+77429 Msa1370480:CDS
ATTTATATATTACAACTGCA+TGG 0.576455 tig0019129:-80310 None:intergenic
AAGACCTTTACCTGGGATGT+GGG 0.577183 tig0019129:-78078 None:intergenic
TGTTCTGGGAGAAGCTGAGT+GGG 0.577794 tig0019129:-75748 None:intergenic
GTTGATTTCACAGATGTGCA+AGG 0.578017 tig0019129:+76000 Msa1370480:intron
TGAGCTTTGGAAGATGTGGA+TGG 0.579447 tig0019129:-77678 None:intergenic
GCTGCATGTACAACAAACTT+GGG 0.581848 tig0019129:-77986 None:intergenic
TTGATAACCAGAAAGGAGAA+AGG 0.582120 tig0019129:+77920 Msa1370480:intron
TTGTATGGTTGGACTAGGAA+CGG 0.583444 tig0019129:-77256 None:intergenic
CCACAAGAGGAGCACTTGGT+GGG 0.590936 tig0019129:-80014 None:intergenic
AGTCACTTGAAGCTGCTCTT+CGG 0.591198 tig0019129:-77175 None:intergenic
GGTGCTGCATCAGCCACAAG+AGG 0.591740 tig0019129:-80087 None:intergenic
GTGCTAAGAAGATTGAATGC+TGG 0.592242 tig0019129:+77490 Msa1370480:CDS
CTAATGGAACTAATCTTCCG+TGG 0.592547 tig0019129:-77570 None:intergenic
GGAGACGCGATGCTCAGCCA+TGG 0.594531 tig0019129:-75707 None:intergenic
GATGTGGGGATATCTGGTGA+TGG 0.598874 tig0019129:+78013 Msa1370480:CDS
TCAGCCACAAGAGGAGCACT+TGG 0.605078 tig0019129:-80078 None:intergenic
ATTGACTCGCTCACTCACTC+AGG 0.608264 tig0019129:-75541 None:intergenic
GTACATGCAGCAGGAGATGT+GGG 0.608887 tig0019129:+77998 Msa1370480:CDS
TGAAGGGTAACCCACATCCC+AGG 0.609054 tig0019129:+78068 Msa1370480:CDS
ACAGGCGTATTACTAACGAT+TGG 0.613651 tig0019129:-77297 None:intergenic
AAAACACTGTTCTCTGCAGT+CGG 0.615994 tig0019129:-77621 None:intergenic
GTATGGACAGAAAATGGTGA+AGG 0.618010 tig0019129:+78051 Msa1370480:CDS
CATCTGATGGATTCAACTGG+CGG 0.620518 tig0019129:+77391 Msa1370480:CDS
TATGGACAGAAAATGGTGAA+GGG 0.621435 tig0019129:+78052 Msa1370480:CDS
GGTTTCTTGTCAGAACTGCA+AGG 0.624573 tig0019129:-77711 None:intergenic
TCTGAATGATGAATTCAGCA+AGG 0.627601 tig0019129:-80285 None:intergenic
CGTCTCCGAAGCTCTCCCTG+TGG 0.630117 tig0019129:+75723 Msa1370480:CDS
GGGGAAGCCAAGGACCTTGG+GGG 0.641628 tig0019129:+80207 Msa1370480:CDS
TGGAACAGAAACAGAAGACA+AGG 0.643346 tig0019129:-77358 None:intergenic
AATTTCTACTCAATGGTCAG+TGG 0.645416 tig0019129:+80164 Msa1370480:CDS
TTGTTCTGGGAGAAGCTGAG+TGG 0.645709 tig0019129:-75749 None:intergenic
CAATGGTCAGTGGACACCGA+AGG 0.651277 tig0019129:+80174 Msa1370480:CDS
TGTACATGCAGCAGGAGATG+TGG 0.652491 tig0019129:+77997 Msa1370480:CDS
GAAGCTGAGTGGGTCCCACA+GGG 0.663562 tig0019129:-75738 None:intergenic
GCTGTCATCATAACTTACAA+GGG 0.670071 tig0019129:+79949 Msa1370480:CDS
ACACACTCACACATAAACCG+TGG 0.687653 tig0019129:+75593 Msa1370480:five_prime_UTR
AATCGTTAGTAATACGCCTG+TGG 0.690746 tig0019129:+77299 Msa1370480:CDS
TACATGCAGCAGGAGATGTG+GGG 0.691459 tig0019129:+77999 Msa1370480:CDS
ACGAGCCAGATCCAAAACGA+AGG 0.695030 tig0019129:+77793 Msa1370480:CDS
TATCTGGTGATGGATACCGA+TGG 0.698652 tig0019129:+78023 Msa1370480:CDS
CCTGTGCCGAAGAAACGACA+CGG 0.708728 tig0019129:+79991 Msa1370480:CDS
ATGGAACTAATCTTCCGTGG+GGG 0.722546 tig0019129:-77567 None:intergenic
CAACTGCAAATTATTCATGG+AGG 0.726603 tig0019129:-80112 None:intergenic
AATGGAACTAATCTTCCGTG+GGG 0.732859 tig0019129:-77568 None:intergenic
CACCGAAGGAGAACTAACCG+GGG 0.738224 tig0019129:+80188 Msa1370480:CDS
GCACAGCAAATTATTCATGG+AGG 0.739037 tig0019129:-80052 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTGTTCATAAATTTATA+TGG + tig0019129:78397-78416 Msa1370480:intron 10.0%
!! AATCAAATAAATTAAACTTA+AGG - tig0019129:78600-78619 None:intergenic 10.0%
!! ATATATAAATGTAAGTATAT+TGG + tig0019129:78984-79003 Msa1370480:intron 10.0%
!! AAATTATCTAACCTTAATTT+CGG - tig0019129:76058-76077 None:intergenic 15.0%
!! ACAAAATAAATAATAACCAA+AGG - tig0019129:78137-78156 None:intergenic 15.0%
!! AATATTGTCATATTATCTTA+GGG + tig0019129:78489-78508 Msa1370480:intron 15.0%
!! ATGATAGTATATAAATGTTA+AGG + tig0019129:78960-78979 Msa1370480:intron 15.0%
!! TTAATATCATTCATATAAAC+AGG - tig0019129:79769-79788 None:intergenic 15.0%
!! TAATATATAAATTAGATAGC+CGG + tig0019129:80321-80340 Msa1370480:three_prime_UTR 15.0%
!!! TTTTTTTTTGTTGCTGAAAA+AGG - tig0019129:75953-75972 None:intergenic 20.0%
!! GAAAAAAATTGTGAATTGTT+TGG + tig0019129:75978-75997 Msa1370480:intron 20.0%
!! ACGGTAATAAAGTTAAAATT+TGG - tig0019129:76087-76106 None:intergenic 20.0%
!! TCTGTTTCAATAAAATAACA+CGG - tig0019129:76106-76125 None:intergenic 20.0%
!!! TTGAAAAGTTTGTTTGATTA+GGG + tig0019129:76269-76288 Msa1370480:intron 20.0%
!! TGCTTTATAGATTATGAATT+TGG + tig0019129:76412-76431 Msa1370480:intron 20.0%
!!! TTGTTAAATGCTTCTATTTT+TGG + tig0019129:76453-76472 Msa1370480:intron 20.0%
!! TTTATTAGTACAAAATCTAC+AGG + tig0019129:76874-76893 Msa1370480:intron 20.0%
!!! AAAGATTTTGTAACAGAATT+TGG - tig0019129:77231-77250 None:intergenic 20.0%
!! AAATAATATGATTTCATACG+CGG - tig0019129:77824-77843 None:intergenic 20.0%
!!! ATTTAATTTGATAACCAGAA+AGG + tig0019129:77913-77932 Msa1370480:intron 20.0%
!! ATATTATGAAAGTTGAGTTT+AGG + tig0019129:78208-78227 Msa1370480:intron 20.0%
!! TGTTCATAAATTTATATGGA+TGG + tig0019129:78401-78420 Msa1370480:intron 20.0%
!! GAATATTGTCATATTATCTT+AGG + tig0019129:78488-78507 Msa1370480:intron 20.0%
!!! AGTCAAATTTATCTAGAATT+TGG - tig0019129:78525-78544 None:intergenic 20.0%
!!! TTGCAACTTTTTATTTTTGA+AGG + tig0019129:78674-78693 Msa1370480:intron 20.0%
!!! ATTTTGTGCATGTTTATATT+TGG + tig0019129:78704-78723 Msa1370480:intron 20.0%
!! AAGTTAAGCTAAAACAAATA+TGG + tig0019129:78805-78824 Msa1370480:intron 20.0%
!! GTGTTAAATTAATACATGAA+AGG + tig0019129:78833-78852 Msa1370480:intron 20.0%
!!! TTGTTTCTTACTTTGAAATA+CGG + tig0019129:79229-79248 Msa1370480:intron 20.0%
!! ATGGATAGAATAAAAAACTT+GGG + tig0019129:79547-79566 Msa1370480:intron 20.0%
!! AGAAAAGGAAAAAAATTCAA+TGG - tig0019129:79850-79869 None:intergenic 20.0%
!! ATTTATATATTACAACTGCA+TGG - tig0019129:80313-80332 None:intergenic 20.0%
!!! TATCTTTTATTCTTGATTCT+TGG + tig0019129:80373-80392 Msa1370480:three_prime_UTR 20.0%
! AAAAGCTCAAGAGATAAAAA+AGG + tig0019129:75774-75793 Msa1370480:CDS 25.0%
!! TTCGAATTTTCATTAGAACT+CGG - tig0019129:75850-75869 None:intergenic 25.0%
!! CTAATCAAACAAACTTTTCA+AGG - tig0019129:76270-76289 None:intergenic 25.0%
!! CTTGAAAAGTTTGTTTGATT+AGG + tig0019129:76268-76287 Msa1370480:intron 25.0%
!! TAGATTATGAATTTGGAATC+TGG + tig0019129:76419-76438 Msa1370480:intron 25.0%
!!! TAAATGCTTCTATTTTTGGT+AGG + tig0019129:76457-76476 Msa1370480:intron 25.0%
!!! AAATGCTTCTATTTTTGGTA+GGG + tig0019129:76458-76477 Msa1370480:intron 25.0%
!! GTTTAGGACTTAGTTATTAT+AGG + tig0019129:76480-76499 Msa1370480:intron 25.0%
!! AATTCATTCCTCCTTTTTAT+GGG - tig0019129:76595-76614 None:intergenic 25.0%
!! AAATTCATTCCTCCTTTTTA+TGG - tig0019129:76596-76615 None:intergenic 25.0%
!! ATTCAACTTTTATGCGATTT+TGG - tig0019129:76677-76696 None:intergenic 25.0%
!! AAAACTTGAAGTCTCAATTT+TGG - tig0019129:76729-76748 None:intergenic 25.0%
!!! TGAATTCTGAATTTTAACAC+TGG + tig0019129:76813-76832 Msa1370480:intron 25.0%
!! GAGTTTTCATCTAACAAATT+AGG + tig0019129:76925-76944 Msa1370480:intron 25.0%
! CTAAAGAAATCAAATACCTT+GGG - tig0019129:77056-77075 None:intergenic 25.0%
! TGATTTCTTTAGCACTAAAT+AGG + tig0019129:77064-77083 Msa1370480:intron 25.0%
! ATATTCTGTATTTGTATGGT+TGG - tig0019129:77270-77289 None:intergenic 25.0%
! AGACATATTCTGTATTTGTA+TGG - tig0019129:77274-77293 None:intergenic 25.0%
!!! GTAAACAAAAAAAGTACTTC+TGG + tig0019129:77327-77346 Msa1370480:CDS 25.0%
!!! AAGCCCATTTATTTTAATTG+TGG + tig0019129:77864-77883 Msa1370480:intron 25.0%
! CTGCCACAATTAAAATAAAT+GGG - tig0019129:77870-77889 None:intergenic 25.0%
! AAACAGAAATTATGCATACT+TGG - tig0019129:78114-78133 None:intergenic 25.0%
! AGTAGAAAAGAAAGCAAAAA+AGG - tig0019129:78361-78380 None:intergenic 25.0%
!! ATAATGTGTAATTTGTATCG+TGG + tig0019129:79011-79030 Msa1370480:intron 25.0%
! GATAAATTACTATAGCCTAT+TGG + tig0019129:79056-79075 Msa1370480:intron 25.0%
! TGTTTCACAATTTAACCAAT+AGG - tig0019129:79074-79093 None:intergenic 25.0%
! ATTTCAAAGTAAGAAACAAG+TGG - tig0019129:79228-79247 None:intergenic 25.0%
!!! TGTTTCTTACTTTGAAATAC+GGG + tig0019129:79230-79249 Msa1370480:intron 25.0%
! AATTCAAAGTAAGAAACATG+TGG - tig0019129:79295-79314 None:intergenic 25.0%
! ATGTTTCTTACTTTGAATTC+CGG + tig0019129:79296-79315 Msa1370480:intron 25.0%
! GTTACATTCATAGAAGTTTA+CGG - tig0019129:79445-79464 None:intergenic 25.0%
! CATGGATAGAATAAAAAACT+TGG + tig0019129:79546-79565 Msa1370480:intron 25.0%
! TGGATAGAATAAAAAACTTG+GGG + tig0019129:79548-79567 Msa1370480:intron 25.0%
!! AGATACATTTTGTAGAACAA+GGG - tig0019129:79640-79659 None:intergenic 25.0%
!! TAGATACATTTTGTAGAACA+AGG - tig0019129:79641-79660 None:intergenic 25.0%
! TATCTTCAAGAAAATGTATC+CGG + tig0019129:79701-79720 Msa1370480:intron 25.0%
!!! TATTTGCCAAACTGATTTTT+CGG + tig0019129:79731-79750 Msa1370480:intron 25.0%
! TAGTAGTTTCTGATAAGAAA+AGG - tig0019129:79865-79884 None:intergenic 25.0%
!! GTAGAAATTTTCTGATTTTG+TGG - tig0019129:80153-80172 None:intergenic 25.0%
! ATCAGAAAATTTCTACTCAA+TGG + tig0019129:80157-80176 Msa1370480:CDS 25.0%
!!! TTTTTTCTCATGTAGTTTAG+TGG + tig0019129:80396-80415 Msa1370480:three_prime_UTR 25.0%
CAAAGATGGAAAAGCAATTA+GGG - tig0019129:75881-75900 None:intergenic 30.0%
! TTTAGGGCATGGTTATAATT+GGG + tig0019129:76236-76255 Msa1370480:intron 30.0%
TTGAATGTAATACCCTTATG+TGG + tig0019129:76295-76314 Msa1370480:intron 30.0%
TTCTCAGATTCAGAACAAAA+AGG - tig0019129:76368-76387 None:intergenic 30.0%
! TTGTTCTGAATCTGAGAATA+AGG + tig0019129:76370-76389 Msa1370480:intron 30.0%
!!! TTCTATTTTTGGTAGGGTTT+AGG + tig0019129:76464-76483 Msa1370480:intron 30.0%
!! TTTTGACTGATCCCATAAAA+AGG + tig0019129:76581-76600 Msa1370480:intron 30.0%
! TGAAGTCTCAATTTTGGATA+TGG - tig0019129:76723-76742 None:intergenic 30.0%
AATTCAGCATTTAAGCTACT+GGG - tig0019129:76799-76818 None:intergenic 30.0%
GTACAAATGAAATGTCTATC+CGG + tig0019129:76844-76863 Msa1370480:intron 30.0%
AAGAAATACTGTCTTGTCTT+GGG - tig0019129:76993-77012 None:intergenic 30.0%
GCTAAAGAAATCAAATACCT+TGG - tig0019129:77057-77076 None:intergenic 30.0%
!! ACTTCCTTTTCATTTTCAAG+AGG - tig0019129:77117-77136 None:intergenic 30.0%
!! AACAAAAAAAGTACTTCTGG+CGG + tig0019129:77330-77349 Msa1370480:CDS 30.0%
! TTGATATCAGATGAGTTTTG+TGG - tig0019129:77735-77754 None:intergenic 30.0%
CAAAACTCATCTGATATCAA+TGG + tig0019129:77735-77754 Msa1370480:CDS 30.0%
TCATCTGATATCAATGGTAA+TGG + tig0019129:77741-77760 Msa1370480:CDS 30.0%
!!! TGGTAAAATAGTTTTGAACG+AGG + tig0019129:77761-77780 Msa1370480:CDS 30.0%
CCTGCCACAATTAAAATAAA+TGG - tig0019129:77871-77890 None:intergenic 30.0%
!!! CCATTTATTTTAATTGTGGC+AGG + tig0019129:77868-77887 Msa1370480:intron 30.0%
TGCATAATTTCTGTTTCCTT+TGG + tig0019129:78118-78137 Msa1370480:intron 30.0%
AAGCAGTTTGAAAAATGACA+AGG + tig0019129:78312-78331 Msa1370480:intron 30.0%
GACAAATTACTATAGCCTAT+AGG + tig0019129:78860-78879 Msa1370480:intron 30.0%
! GTTTAACTTAGACCAATAAG+TGG + tig0019129:78927-78946 Msa1370480:intron 30.0%
TGGTTAAATTGTGAAACAAG+AGG + tig0019129:79076-79095 Msa1370480:intron 30.0%
CAATATTTACCAACTTACCT+AGG - tig0019129:79102-79121 None:intergenic 30.0%
!! GTTTCTTACTTTGAAATACG+GGG + tig0019129:79231-79250 Msa1370480:intron 30.0%
TGTTTCTTACTTTGAATTCC+GGG + tig0019129:79297-79316 Msa1370480:intron 30.0%
! TGTATTTTCTTGAGGAAACA+TGG - tig0019129:79341-79360 None:intergenic 30.0%
TCTAACATCAACACATCATA+TGG - tig0019129:79467-79486 None:intergenic 30.0%
GGATAGAATAAAAAACTTGG+GGG + tig0019129:79549-79568 Msa1370480:intron 30.0%
CAAAATGTATCTATCCATCA+TGG + tig0019129:79648-79667 Msa1370480:intron 30.0%
GATACATAATACTACCATGA+TGG - tig0019129:79665-79684 None:intergenic 30.0%
ATGGTAGTATTATGTATCCA+TGG + tig0019129:79667-79686 Msa1370480:intron 30.0%
! GTTTGGCAAATAATTTTGTC+CGG - tig0019129:79723-79742 None:intergenic 30.0%
AAAAAGCCGAAAAATCAGTT+TGG - tig0019129:79740-79759 None:intergenic 30.0%
!!! AGCTCACTTTTTTCCTTTTA+CGG + tig0019129:79789-79808 Msa1370480:intron 30.0%
!! TTTTTCCTTTTACGGATTGT+TGG + tig0019129:79797-79816 Msa1370480:intron 30.0%
ACTCAACTGCAAATTATTCA+TGG - tig0019129:80118-80137 None:intergenic 30.0%
! TAATTTGCAGTTGAGTAAAC+CGG + tig0019129:80122-80141 Msa1370480:CDS 30.0%
GGAACAAGTATAGAATTGAT+TGG + tig0019129:80485-80504 Msa1370480:three_prime_UTR 30.0%
! TCGTGTTTGTTGAATTTCCA+CGG - tig0019129:75613-75632 None:intergenic 35.0%
TTTCTGTGTCTAAGTTTCCA+TGG + tig0019129:75690-75709 Msa1370480:exon 35.0%
!!! CTTGAGCTTTTTGTTGTTCT+GGG - tig0019129:75765-75784 None:intergenic 35.0%
!!! TCTTGAGCTTTTTGTTGTTC+TGG - tig0019129:75766-75785 None:intergenic 35.0%
GAGATAAAAAAGGAACCAGT+CGG + tig0019129:75784-75803 Msa1370480:CDS 35.0%
!! TAATTCACTTTTCTGCGACT+CGG - tig0019129:75827-75846 None:intergenic 35.0%
CCAAAGATGGAAAAGCAATT+AGG - tig0019129:75882-75901 None:intergenic 35.0%
!! CCTAATTGCTTTTCCATCTT+TGG + tig0019129:75879-75898 Msa1370480:CDS 35.0%
!! TGCTTTTCCATCTTTGGTTT+TGG + tig0019129:75885-75904 Msa1370480:CDS 35.0%
!! GTTTTGGATCAACGTAGTTT+CGG + tig0019129:75901-75920 Msa1370480:CDS 35.0%
GATAAACAGAGTGGAAATTG+AGG - tig0019129:75931-75950 None:intergenic 35.0%
CTGAAAAAGGATAAACAGAG+TGG - tig0019129:75940-75959 None:intergenic 35.0%
AATCCCTAATACGCTGAATT+CGG + tig0019129:76023-76042 Msa1370480:CDS 35.0%
GGTTGTCAAATCCGAAATTA+AGG + tig0019129:76044-76063 Msa1370480:CDS 35.0%
! GTTTAGGGCATGGTTATAAT+TGG + tig0019129:76235-76254 Msa1370480:intron 35.0%
TTAGGGCATGGTTATAATTG+GGG + tig0019129:76237-76256 Msa1370480:intron 35.0%
AATAGACCGAAAATCGAAAC+AGG - tig0019129:76524-76543 None:intergenic 35.0%
TGATTAAGCTGAAGCTTCTA+AGG - tig0019129:76551-76570 None:intergenic 35.0%
TGATCTTCGTGAAGATTCTT+AGG + tig0019129:76763-76782 Msa1370480:intron 35.0%
GAATTCAGCATTTAAGCTAC+TGG - tig0019129:76800-76819 None:intergenic 35.0%
TGTACTAATAAATGCGCTAC+CGG - tig0019129:76866-76885 None:intergenic 35.0%
GAAGAAATACTGTCTTGTCT+TGG - tig0019129:76994-77013 None:intergenic 35.0%
TGTATGTTATGTACATCCCA+AGG + tig0019129:77037-77056 Msa1370480:intron 35.0%
TGGACCTCTTGAAAATGAAA+AGG + tig0019129:77110-77129 Msa1370480:CDS 35.0%
! GAATTTGGTGATAGTTCAGA+TGG - tig0019129:77216-77235 None:intergenic 35.0%
TGTATTTGTATGGTTGGACT+AGG - tig0019129:77264-77283 None:intergenic 35.0%
!! TTTTTGTTTACTTCTGCCAC+AGG - tig0019129:77318-77337 None:intergenic 35.0%
TGCTAAGAAGATTGAATGCT+GGG + tig0019129:77491-77510 Msa1370480:CDS 35.0%
TAATGGAACTAATCTTCCGT+GGG - tig0019129:77572-77591 None:intergenic 35.0%
! ACGGAAGATTAGTTCCATTA+GGG + tig0019129:77572-77591 Msa1370480:CDS 35.0%
! TTGATAACCAGAAAGGAGAA+AGG + tig0019129:77920-77939 Msa1370480:intron 35.0%
! ACAAACTTGGGTTTCTTTTC+AGG - tig0019129:77977-77996 None:intergenic 35.0%
TATGGACAGAAAATGGTGAA+GGG + tig0019129:78052-78071 Msa1370480:CDS 35.0%
! AATTATGCATACTTGGCTTG+TGG - tig0019129:78107-78126 None:intergenic 35.0%
!!! GCAGCTTGCAACTTTTTTAT+TGG - tig0019129:78279-78298 None:intergenic 35.0%
TGTTTCATAAGCTGACCTAT+AGG - tig0019129:78878-78897 None:intergenic 35.0%
AACAAGAGGCTAAGATAAGT+TGG + tig0019129:78894-78913 Msa1370480:intron 35.0%
TAACTTAGACCAATAAGTGG+CGG + tig0019129:78930-78949 Msa1370480:intron 35.0%
!!! TAGAGGGGGTCAATTTTTTA+TGG + tig0019129:79139-79158 Msa1370480:intron 35.0%
TAAACCACTATACCAATGGT+AGG - tig0019129:79270-79289 None:intergenic 35.0%
GGATTAAACCACTATACCAA+TGG - tig0019129:79274-79293 None:intergenic 35.0%
GTTTCTTACTTTGAATTCCG+GGG + tig0019129:79298-79317 Msa1370480:intron 35.0%
! TTTTCTTGAGGAAACATGGT+AGG - tig0019129:79337-79356 None:intergenic 35.0%
GTTTCCTCAAGAAAATACAC+TGG + tig0019129:79342-79361 Msa1370480:intron 35.0%
! CTTTCCAGTGTATTTTCTTG+AGG - tig0019129:79349-79368 None:intergenic 35.0%
CTCAAGAAAATACACTGGAA+AGG + tig0019129:79347-79366 Msa1370480:intron 35.0%
AAGGCAAAAATGCGCTTAAA+AGG + tig0019129:79366-79385 Msa1370480:intron 35.0%
! ACATTTTGTAGAACAAGGGA+TGG - tig0019129:79636-79655 None:intergenic 35.0%
AAGATACAGTTCTGTTTCCA+TGG - tig0019129:79687-79706 None:intergenic 35.0%
GAAAACCAACAATCCGTAAA+AGG - tig0019129:79805-79824 None:intergenic 35.0%
TGCTGTCATCATAACTTACA+AGG + tig0019129:79948-79967 Msa1370480:CDS 35.0%
GCTGTCATCATAACTTACAA+GGG + tig0019129:79949-79968 Msa1370480:CDS 35.0%
CAACTGCAAATTATTCATGG+AGG - tig0019129:80115-80134 None:intergenic 35.0%
AATTTCTACTCAATGGTCAG+TGG + tig0019129:80164-80183 Msa1370480:CDS 35.0%
TCTGAATGATGAATTCAGCA+AGG - tig0019129:80288-80307 None:intergenic 35.0%
!!! ACTTTTTCAGACAAGCTGAA+CGG - tig0019129:80454-80473 None:intergenic 35.0%
! CTGAAAAAGTTTGCTTGTAG+TGG + tig0019129:80464-80483 Msa1370480:three_prime_UTR 35.0%
CGTTGATCCAAAACCAAAGA+TGG - tig0019129:75895-75914 None:intergenic 40.0%
! GTTGATTTCACAGATGTGCA+AGG + tig0019129:76000-76019 Msa1370480:intron 40.0%
CAACCGAATTCAGCGTATTA+GGG - tig0019129:76029-76048 None:intergenic 40.0%
ACAACCGAATTCAGCGTATT+AGG - tig0019129:76030-76049 None:intergenic 40.0%
TGATCATTTGCAGTAGTTGC+TGG + tig0019129:76213-76232 Msa1370480:intron 40.0%
!! TTTGCAGTAGTTGCTGGTTT+AGG + tig0019129:76219-76238 Msa1370480:intron 40.0%
!! TTGCAGTAGTTGCTGGTTTA+GGG + tig0019129:76220-76239 Msa1370480:intron 40.0%
GCTACACAGTTTCCACATAA+GGG - tig0019129:76310-76329 None:intergenic 40.0%
AGCTACACAGTTTCCACATA+AGG - tig0019129:76311-76330 None:intergenic 40.0%
! GAGTCTCCTGTTTCGATTTT+CGG + tig0019129:76515-76534 Msa1370480:intron 40.0%
TGACTGATCCCATAAAAAGG+AGG + tig0019129:76584-76603 Msa1370480:intron 40.0%
AAATAGGCCATTTCATGCTC+AGG + tig0019129:77080-77099 Msa1370480:intron 40.0%
! TTTGGTGATAGTTCAGATGG+TGG - tig0019129:77213-77232 None:intergenic 40.0%
! TTGTATGGTTGGACTAGGAA+CGG - tig0019129:77259-77278 None:intergenic 40.0%
ACAGGCGTATTACTAACGAT+TGG - tig0019129:77300-77319 None:intergenic 40.0%
AATCGTTAGTAATACGCCTG+TGG + tig0019129:77299-77318 Msa1370480:CDS 40.0%
TGGAACAGAAACAGAAGACA+AGG - tig0019129:77361-77380 None:intergenic 40.0%
!! TGTCTTCTGTTTCTGTTCCA+AGG + tig0019129:77361-77380 Msa1370480:CDS 40.0%
CAGTTGAATCCATCAGATGA+TGG - tig0019129:77390-77409 None:intergenic 40.0%
!! CATCATCTGATGGATTCAAC+TGG + tig0019129:77388-77407 Msa1370480:CDS 40.0%
GATTCAACTGGCGGAAATAT+GGG + tig0019129:77400-77419 Msa1370480:CDS 40.0%
CAAGTTAAGAGTCCTACTAC+AGG + tig0019129:77429-77448 Msa1370480:CDS 40.0%
GTGCTAAGAAGATTGAATGC+TGG + tig0019129:77490-77509 Msa1370480:CDS 40.0%
ATTGAATGCTGGGATCATTC+AGG + tig0019129:77501-77520 Msa1370480:CDS 40.0%
AATGGAACTAATCTTCCGTG+GGG - tig0019129:77571-77590 None:intergenic 40.0%
CTAATGGAACTAATCTTCCG+TGG - tig0019129:77573-77592 None:intergenic 40.0%
! CACGGAAGATTAGTTCCATT+AGG + tig0019129:77571-77590 Msa1370480:CDS 40.0%
CGCAAACTTACTTTCCCTAA+TGG - tig0019129:77589-77608 None:intergenic 40.0%
AAAACACTGTTCTCTGCAGT+CGG - tig0019129:77624-77643 None:intergenic 40.0%
GTGGATGGATCAGAATCTTT+CGG - tig0019129:77666-77685 None:intergenic 40.0%
!! TTCTTGAGCTTTGGAAGATG+TGG - tig0019129:77685-77704 None:intergenic 40.0%
AGGTGTTTCTTCTTGAGCTT+TGG - tig0019129:77694-77713 None:intergenic 40.0%
GCTGCATGTACAACAAACTT+GGG - tig0019129:77989-78008 None:intergenic 40.0%
TGCTGCATGTACAACAAACT+TGG - tig0019129:77990-78009 None:intergenic 40.0%
!! AAGTTTGTTGTACATGCAGC+AGG + tig0019129:77989-78008 Msa1370480:CDS 40.0%
GTATGGACAGAAAATGGTGA+AGG + tig0019129:78051-78070 Msa1370480:CDS 40.0%
GTGGATAAAGACCTTTACCT+GGG - tig0019129:78088-78107 None:intergenic 40.0%
TGTGGATAAAGACCTTTACC+TGG - tig0019129:78089-78108 None:intergenic 40.0%
CACCAGCTTGAATAAGATCT+TGG - tig0019129:78338-78357 None:intergenic 40.0%
AGGTCAGCTTATGAAACAAG+AGG + tig0019129:78880-78899 Msa1370480:intron 40.0%
AATTGTGAAACAAGAGGCCT+AGG + tig0019129:79082-79101 Msa1370480:intron 40.0%
TGTTAAACTGAGACCAGTAG+AGG + tig0019129:79122-79141 Msa1370480:intron 40.0%
GTTAAACTGAGACCAGTAGA+GGG + tig0019129:79123-79142 Msa1370480:intron 40.0%
TTAAACTGAGACCAGTAGAG+GGG + tig0019129:79124-79143 Msa1370480:intron 40.0%
AAAAAATTGACCCCCTCTAC+TGG - tig0019129:79138-79157 None:intergenic 40.0%
! ATAACGTGTAGCTTGTATCG+TGG + tig0019129:79188-79207 Msa1370480:intron 40.0%
! TAGCTTGTATCGTGGTATAG+TGG + tig0019129:79196-79215 Msa1370480:intron 40.0%
AAATACGGGGTTCGAATCTT+GGG + tig0019129:79244-79263 Msa1370480:intron 40.0%
!!! GTTGCTAAGCTAGTTTTGCA+AGG - tig0019129:79415-79434 None:intergenic 40.0%
ACATCCACATCCTTAATTCG+AGG + tig0019129:79512-79531 Msa1370480:intron 40.0%
GGATGGAAACAGACATGTTT+CGG - tig0019129:79619-79638 None:intergenic 40.0%
AGCAAATTATTCATGGAGGC+AGG - tig0019129:80051-80070 None:intergenic 40.0%
GCACAGCAAATTATTCATGG+AGG - tig0019129:80055-80074 None:intergenic 40.0%
TGGGCACAGCAAATTATTCA+TGG - tig0019129:80058-80077 None:intergenic 40.0%
TGCAAATTATTCATGGAGGC+AGG - tig0019129:80111-80130 None:intergenic 40.0%
ACACACTCACACATAAACCG+TGG + tig0019129:75593-75612 Msa1370480:five_prime_UTR 45.0%
GAAAACGAGATGCAATGACC+AGG + tig0019129:76631-76650 Msa1370480:intron 45.0%
GCCATTTCATGCTCAGGAAA+CGG + tig0019129:77086-77105 Msa1370480:intron 45.0%
ACCGTTTCCTGAGCATGAAA+TGG - tig0019129:77090-77109 None:intergenic 45.0%
TTTCATGCTCAGGAAACGGT+TGG + tig0019129:77090-77109 Msa1370480:intron 45.0%
TGCTAAAAGAGAAGCTGTCC+AGG + tig0019129:77137-77156 Msa1370480:CDS 45.0%
AGTCACTTGAAGCTGCTCTT+CGG - tig0019129:77178-77197 None:intergenic 45.0%
GGCGTATTACTAACGATTGG+AGG - tig0019129:77297-77316 None:intergenic 45.0%
!! CATCTGATGGATTCAACTGG+CGG + tig0019129:77391-77410 Msa1370480:CDS 45.0%
GGATTCAACTGGCGGAAATA+TGG + tig0019129:77399-77418 Msa1370480:CDS 45.0%
TAGCTTCGAGAACCTGTAGT+AGG - tig0019129:77444-77463 None:intergenic 45.0%
CAGGTTCTCGAAGCTATTAC+AGG + tig0019129:77448-77467 Msa1370480:CDS 45.0%
ATGGAACTAATCTTCCGTGG+GGG - tig0019129:77570-77589 None:intergenic 45.0%
!! GAATCTTTCGGAGCATTGAC+AGG - tig0019129:77654-77673 None:intergenic 45.0%
!! TGAGCTTTGGAAGATGTGGA+TGG - tig0019129:77681-77700 None:intergenic 45.0%
GGTTTCTTGTCAGAACTGCA+AGG - tig0019129:77714-77733 None:intergenic 45.0%
!! ACTTGCCTTCGTTTTGGATC+TGG - tig0019129:77801-77820 None:intergenic 45.0%
CAAGTCACCTTTCTCCTTTC+TGG - tig0019129:77930-77949 None:intergenic 45.0%
CAGAAAGGAGAAAGGTGACT+TGG + tig0019129:77928-77947 Msa1370480:intron 45.0%
!! TATCTGGTGATGGATACCGA+TGG + tig0019129:78023-78042 Msa1370480:CDS 45.0%
GCGCAAGTATGGACAGAAAA+TGG + tig0019129:78045-78064 Msa1370480:CDS 45.0%
AAGACCTTTACCTGGGATGT+GGG - tig0019129:78081-78100 None:intergenic 45.0%
AAAGACCTTTACCTGGGATG+TGG - tig0019129:78082-78101 None:intergenic 45.0%
GGCCAAGATCTTATTCAAGC+TGG + tig0019129:78333-78352 Msa1370480:intron 45.0%
AACAAGAGGCCTAGGTAAGT+TGG + tig0019129:79090-79109 Msa1370480:intron 45.0%
TAAACTGAGACCAGTAGAGG+GGG + tig0019129:79125-79144 Msa1370480:intron 45.0%
GAAATACGGGGTTCGAATCT+TGG + tig0019129:79243-79262 Msa1370480:intron 45.0%
AATTCCGGGGTTCCAATCTT+GGG + tig0019129:79311-79330 Msa1370480:intron 45.0%
AAACATGGTAGGCCCAAGAT+TGG - tig0019129:79326-79345 None:intergenic 45.0%
!!! AGCTAGTTTTGCAAGGAGGA+CGG - tig0019129:79408-79427 None:intergenic 45.0%
!!! GCTAAGCTAGTTTTGCAAGG+AGG - tig0019129:79412-79431 None:intergenic 45.0%
CATTCGCACATGCTGAACAT+CGG + tig0019129:79487-79506 Msa1370480:intron 45.0%
ACATCCTTAATTCGAGGCGT+CGG + tig0019129:79518-79537 Msa1370480:intron 45.0%
TGAGGTACAGATGGAAGTCA+CGG - tig0019129:79577-79596 None:intergenic 45.0%
!!! CGGATCTTTTGAGGTACAGA+TGG - tig0019129:79586-79605 None:intergenic 45.0%
!!! GGTCAGTAACGGATCTTTTG+AGG - tig0019129:79595-79614 None:intergenic 45.0%
CATGTTTCGGTGGTCAGTAA+CGG - tig0019129:79606-79625 None:intergenic 45.0%
TGGAAACAGACATGTTTCGG+TGG - tig0019129:79616-79635 None:intergenic 45.0%
TACTACAGATGCACTTCTGC+TGG + tig0019129:79880-79899 Msa1370480:CDS 45.0%
GTCTCAATGTGCTTTCGAAC+AGG - tig0019129:79910-79929 None:intergenic 45.0%
GACAGCATCTGAGTTGTCTA+CGG - tig0019129:79935-79954 None:intergenic 45.0%
! TTCTGATTTTGTGGCGAGTC+CGG - tig0019129:80144-80163 None:intergenic 45.0%
GCCGGTCTCTTGTAATTTCA+CGG + tig0019129:80339-80358 Msa1370480:three_prime_UTR 45.0%
GCCGTGAAATTACAAGAGAC+CGG - tig0019129:80343-80362 None:intergenic 45.0%
!! TGTTCTGGGAGAAGCTGAGT+GGG - tig0019129:75751-75770 None:intergenic 50.0%
!! TTGTTCTGGGAGAAGCTGAG+TGG - tig0019129:75752-75771 None:intergenic 50.0%
!! TTCACTTTTCTGCGACTCGG+TGG - tig0019129:75824-75843 None:intergenic 50.0%
!! GTAGTTGCTGGTTTAGGGCA+TGG + tig0019129:76225-76244 Msa1370480:intron 50.0%
! CCATCAGATGATGGTGTCCT+TGG - tig0019129:77381-77400 None:intergenic 50.0%
CCAAGGACACCATCATCTGA+TGG + tig0019129:77378-77397 Msa1370480:CDS 50.0%
ACGAGCCAGATCCAAAACGA+AGG + tig0019129:77793-77812 Msa1370480:CDS 50.0%
TGTACATGCAGCAGGAGATG+TGG + tig0019129:77997-78016 Msa1370480:CDS 50.0%
GTACATGCAGCAGGAGATGT+GGG + tig0019129:77998-78017 Msa1370480:CDS 50.0%
TACATGCAGCAGGAGATGTG+GGG + tig0019129:77999-78018 Msa1370480:CDS 50.0%
GATGTGGGGATATCTGGTGA+TGG + tig0019129:78013-78032 Msa1370480:CDS 50.0%
TCTGTCCATACTTGCGCCAT+CGG - tig0019129:78042-78061 None:intergenic 50.0%
GTAACCCACATCCCAGGTAA+AGG + tig0019129:78074-78093 Msa1370480:intron 50.0%
ATCCATGCTCCGCCACTTAT+TGG - tig0019129:78942-78961 None:intergenic 50.0%
TCGAATCTTGGGCCTACCAT+TGG + tig0019129:79255-79274 Msa1370480:intron 50.0%
TGGGCCTACCATTGGTATAG+TGG + tig0019129:79263-79282 Msa1370480:intron 50.0%
GAATTCCGGGGTTCCAATCT+TGG + tig0019129:79310-79329 Msa1370480:intron 50.0%
!!! CTAGTTTTGCAAGGAGGACG+GGG - tig0019129:79406-79425 None:intergenic 50.0%
!!! GCTAGTTTTGCAAGGAGGAC+GGG - tig0019129:79407-79426 None:intergenic 50.0%
GACGCCTCGAATTAAGGATG+TGG - tig0019129:79519-79538 None:intergenic 50.0%
GACACCGAAGGAGAACTAAC+CGG + tig0019129:80186-80205 Msa1370480:CDS 50.0%
ACACCGAAGGAGAACTAACC+GGG + tig0019129:80187-80206 Msa1370480:CDS 50.0%
! TTCCCCGGTTAGTTCTCCTT+CGG - tig0019129:80193-80212 None:intergenic 50.0%
CTATTGCTTTCTCACCCCCA+AGG - tig0019129:80224-80243 None:intergenic 50.0%
GATGCAATGACCAGGCTCTC+TGG + tig0019129:76639-76658 Msa1370480:intron 55.0%
CACTTTGTAGCCAGAGAGCC+TGG - tig0019129:76652-76671 None:intergenic 55.0%
TGTCCAGGAACCTTCAGCTC+AGG + tig0019129:77152-77171 Msa1370480:CDS 55.0%
AGCACAGTCATGATCCCCCA+CGG + tig0019129:77553-77572 Msa1370480:CDS 55.0%
!! TCTGCAGTCGGTTCGTTGGA+GGG - tig0019129:77612-77631 None:intergenic 55.0%
!! GTTCTCTGCAGTCGGTTCGT+TGG - tig0019129:77616-77635 None:intergenic 55.0%
! ACGCGGACTTGCCTTCGTTT+TGG - tig0019129:77807-77826 None:intergenic 55.0%
GCAGGAGATGTGGGGATATC+TGG + tig0019129:78007-78026 Msa1370480:CDS 55.0%
GGATACCGATGGCGCAAGTA+TGG + tig0019129:78034-78053 Msa1370480:CDS 55.0%
TGAAGGGTAACCCACATCCC+AGG + tig0019129:78068-78087 Msa1370480:CDS 55.0%
! GACCAATAAGTGGCGGAGCA+TGG + tig0019129:78937-78956 Msa1370480:intron 55.0%
TAGGCCCAAGATTGGAACCC+CGG - tig0019129:79318-79337 None:intergenic 55.0%
!! AGCACCGACGCCTCGAATTA+AGG - tig0019129:79525-79544 None:intergenic 55.0%
CCTGTGCCGAAGAAACGACA+CGG + tig0019129:79991-80010 Msa1370480:CDS 55.0%
!! CCACAAGAGGAGCACTTGGT+GGG - tig0019129:80017-80036 None:intergenic 55.0%
!! CCACAAGAGGAGCACTTGGT+GGG - tig0019129:80017-80036 None:intergenic 55.0%
!! TCAGCCACAAGAGGAGCACT+TGG - tig0019129:80081-80100 None:intergenic 55.0%
CAATGGTCAGTGGACACCGA+AGG + tig0019129:80174-80193 Msa1370480:CDS 55.0%
CACCGAAGGAGAACTAACCG+GGG + tig0019129:80188-80207 Msa1370480:CDS 55.0%
AGAACTAACCGGGGAAGCCA+AGG + tig0019129:80197-80216 Msa1370480:CDS 55.0%
TTTCTCACCCCCAAGGTCCT+TGG - tig0019129:80217-80236 None:intergenic 55.0%
GCTCGAACGCTTCTGAGCAT+AGG + tig0019129:80249-80268 Msa1370480:CDS 55.0%
GTCTCCGAAGCTCTCCCTGT+GGG + tig0019129:75724-75743 Msa1370480:CDS 60.0%
GAAGCTGAGTGGGTCCCACA+GGG - tig0019129:75741-75760 None:intergenic 60.0%
AGAAGCTGAGTGGGTCCCAC+AGG - tig0019129:75742-75761 None:intergenic 60.0%
!! TTCTGCGACTCGGTGGCTGA+CGG - tig0019129:75817-75836 None:intergenic 60.0%
TGCTCTTCGGCCTGAGCTGA+AGG - tig0019129:77165-77184 None:intergenic 60.0%
!! CTCTGCAGTCGGTTCGTTGG+AGG - tig0019129:77613-77632 None:intergenic 60.0%
TTGCAAGGAGGACGGGGACT+TGG - tig0019129:79400-79419 None:intergenic 60.0%
!! TTCGAGGCGTCGGTGCTACA+TGG + tig0019129:79528-79547 Msa1370480:intron 60.0%
!! CCGTGTCGTTTCTTCGGCAC+AGG - tig0019129:79994-80013 None:intergenic 60.0%
!! GGTGGGCCGTGTCGTTTCTT+CGG - tig0019129:80000-80019 None:intergenic 60.0%
CCCACCAAGTGCTCCTCTTG+TGG + tig0019129:80014-80033 Msa1370480:CDS 60.0%
!! GCCACAAGAGGAGCACTTGG+TGG - tig0019129:80018-80037 None:intergenic 60.0%
!! GCAGCCACAAGAGGAGCACT+TGG - tig0019129:80021-80040 None:intergenic 60.0%
CCCACCAAGTGCTCCTCTTG+TGG + tig0019129:80014-80033 Msa1370480:CDS 60.0%
!! GCCACAAGAGGAGCACTTGG+TGG - tig0019129:80018-80037 None:intergenic 60.0%
! GGTGCTGCATCAGCCACAAG+AGG - tig0019129:80090-80109 None:intergenic 60.0%
GGAGACGCGATGCTCAGCCA+TGG - tig0019129:75710-75729 None:intergenic 65.0%
CGTCTCCGAAGCTCTCCCTG+TGG + tig0019129:75723-75742 Msa1370480:CDS 65.0%
GGGTCCCACAGGGAGAGCTT+CGG - tig0019129:75731-75750 None:intergenic 65.0%
GCTGACGGTGATTCGCCGAC+TGG - tig0019129:75802-75821 None:intergenic 65.0%
CGGCCTGAGCTGAAGGTTCC+TGG - tig0019129:77158-77177 None:intergenic 65.0%
! GGTGCTGCAGCAGCCACAAG+AGG - tig0019129:80030-80049 None:intergenic 65.0%
ACCGGGGAAGCCAAGGACCT+TGG + tig0019129:80204-80223 Msa1370480:CDS 65.0%
CCCAAGGTCCTTGGCTTCCC+CGG - tig0019129:80208-80227 None:intergenic 65.0%
CCGGGGAAGCCAAGGACCTT+GGG + tig0019129:80205-80224 Msa1370480:CDS 65.0%
CGGGGAAGCCAAGGACCTTG+GGG + tig0019129:80206-80225 Msa1370480:CDS 65.0%
GGGGAAGCCAAGGACCTTGG+GGG + tig0019129:80207-80226 Msa1370480:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0019129 gene 75543 80525 75543 ID=Msa1370480;Name=Msa1370480
tig0019129 mRNA 75543 80525 75543 ID=Msa1370480-mRNA-1;Parent=Msa1370480;Name=Msa1370480-mRNA-1;_AED=0.05;_eAED=0.05;_QI=166|0.75|0.6|1|1|1|5|232|520
tig0019129 exon 75543 75922 75543 ID=Msa1370480-mRNA-1:exon:1674;Parent=Msa1370480-mRNA-1
tig0019129 exon 76013 76065 76013 ID=Msa1370480-mRNA-1:exon:1675;Parent=Msa1370480-mRNA-1
tig0019129 exon 77102 77824 77102 ID=Msa1370480-mRNA-1:exon:1676;Parent=Msa1370480-mRNA-1
tig0019129 exon 77935 78089 77935 ID=Msa1370480-mRNA-1:exon:1677;Parent=Msa1370480-mRNA-1
tig0019129 exon 79876 80525 79876 ID=Msa1370480-mRNA-1:exon:1678;Parent=Msa1370480-mRNA-1
tig0019129 five_prime_UTR 75543 75708 75543 ID=Msa1370480-mRNA-1:five_prime_utr;Parent=Msa1370480-mRNA-1
tig0019129 CDS 75709 75922 75709 ID=Msa1370480-mRNA-1:cds;Parent=Msa1370480-mRNA-1
tig0019129 CDS 76013 76065 76013 ID=Msa1370480-mRNA-1:cds;Parent=Msa1370480-mRNA-1
tig0019129 CDS 77102 77824 77102 ID=Msa1370480-mRNA-1:cds;Parent=Msa1370480-mRNA-1
tig0019129 CDS 77935 78089 77935 ID=Msa1370480-mRNA-1:cds;Parent=Msa1370480-mRNA-1
tig0019129 CDS 79876 80293 79876 ID=Msa1370480-mRNA-1:cds;Parent=Msa1370480-mRNA-1
tig0019129 three_prime_UTR 80294 80525 80294 ID=Msa1370480-mRNA-1:three_prime_utr;Parent=Msa1370480-mRNA-1
Gene Sequence

>Msa1370480

ATGGCTGAGCATCGCGTCTCCGAAGCTCTCCCTGTGGGACCCACTCAGCTTCTCCCAGAACAACAAAAAGCTCAAGAGATAAAAAAGGAACCAGTCGGCGAATCACCGTCAGCCACCGAGTCGCAGAAAAGTGAATTACCGAGTTCTAATGAAAATTCGAATTCAGAAACCCTAATTGCTTTTCCATCTTTGGTTTTGGATCAACGTAGTTTCGATGTGCAAGGAATCCCTAATACGCTGAATTCGGTTGTCAAATCCGAAATTAAGGAAACGGTTGGACCTCTTGAAAATGAAAAGGAAGTTGCTAAAAGAGAAGCTGTCCAGGAACCTTCAGCTCAGGCCGAAGAGCAGCTTCAAGTGACTGTGTCTTCAAATCCACCATCTGAACTATCACCAAATTCTGTTACAAAATCTTTATCATCCGTTCCTAGTCCAACCATACAAATACAGAATATGTCTCCTCCAATCGTTAGTAATACGCCTGTGGCAGAAGTAAACAAAAAAAGTACTTCTGGCGGTAGAGCCTTGTCTTCTGTTTCTGTTCCAAGGACACCATCATCTGATGGATTCAACTGGCGGAAATATGGGCAGAAGCAAGTTAAGAGTCCTACTACAGGTTCTCGAAGCTATTACAGGTGTACTCAATCAAACTGTTGTGCTAAGAAGATTGAATGCTGGGATCATTCAGGTCATGTGATAGAGACTGTTTATAAAAGTGAGCACAGTCATGATCCCCCACGGAAGATTAGTTCCATTAGGGAAAGTAAGTTTGCGCCCTCCAACGAACCGACTGCAGAGAACAGTGTTTTAGTGAAGCCTGTCAATGCTCCGAAAGATTCTGATCCATCCACATCTTCCAAAGCTCAAGAAGAAACACCTTGCAGTTCTGACAAGAAACCACAAAACTCATCTGATATCAATGGTAATGGTAAAATAGTTTTGAACGAGGAACATGTCGACGAGCCAGATCCAAAACGAAGGCAAGTCCGCGAGAAAGGTGACTTGGTTCACTCAGATTCTTCTGTAAAACCTGAAAAGAAACCCAAGTTTGTTGTACATGCAGCAGGAGATGTGGGGATATCTGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGTAACCCACATCCCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTTCGAAAGCACATTGAGACTGCCGTAGACAACTCAGATGCTGTCATCATAACTTACAAGGGTGTACATGATCATGACACTCCTGTGCCGAAGAAACGACACGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAATAATTTGCTGTGCCCACCAAGTGCTCCTCTTGTGGCTGATGCAGCACCTGCCTCCATGAATAATTTGCAGTTGAGTAAACCGGACTCGCCACAAAATCAGAAAATTTCTACTCAATGGTCAGTGGACACCGAAGGAGAACTAACCGGGGAAGCCAAGGACCTTGGGGGTGAGAAAGCAATAGAGTCAGCTCGAACGCTTCTGAGCATAGGTTTTGAAATCAAGCCTTGCTGA
Protein sequence

>Msa1370480

MAEHRVSEALPVGPTQLLPEQQKAQEIKKEPVGESPSATESQKSELPSSNENSNSETLIAFPSLVLDQRSFDVQGIPNTLNSVVKSEIKETVGPLENEKEVAKREAVQEPSAQAEEQLQVTVSSNPPSELSPNSVTKSLSSVPSPTIQIQNMSPPIVSNTPVAEVNKKSTSGGRALSSVSVPRTPSSDGFNWRKYGQKQVKSPTTGSRSYYRCTQSNCCAKKIECWDHSGHVIETVYKSEHSHDPPRKISSIRESKFAPSNEPTAENSVLVKPVNAPKDSDPSTSSKAQEETPCSSDKKPQNSSDINGNGKIVLNEEHVDEPDPKRRQVREKGDLVHSDSSVKPEKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDTPVPKKRHGPPSAPLVAAAAPASMNNLLCPPSAPLVADAAPASMNNLQLSKPDSPQNQKISTQWSVDTEGELTGEAKDLGGEKAIESARTLLSIGFEIKPC*