AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1383990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1383990 MtrunA17_Chr4g0074001 93.462 520 31 2 1 520 1 517 0.0 947
Msa1383990 MtrunA17_Chr7g0218081 40.203 296 132 9 185 457 226 499 6.69e-50 179
Msa1383990 MtrunA17_Chr3g0101131 35.673 342 172 11 115 427 156 478 8.54e-48 174
Msa1383990 MtrunA17_Chr5g0445311 37.269 271 154 6 156 424 170 426 1.28e-47 173
Msa1383990 MtrunA17_Chr5g0445311 53.731 67 30 1 361 427 199 264 3.65e-15 78.2
Msa1383990 MtrunA17_Chr5g0418191 39.764 254 134 8 177 424 142 382 1.90e-47 170
Msa1383990 MtrunA17_Chr5g0418191 54.688 64 28 1 363 426 152 214 8.09e-16 79.7
Msa1383990 MtrunA17_Chr3g0106491 38.735 253 133 4 179 424 190 427 1.90e-45 166
Msa1383990 MtrunA17_Chr3g0106491 52.239 67 31 1 361 427 197 262 6.99e-16 80.5
Msa1383990 MtrunA17_Chr4g0042831 37.025 316 140 12 111 424 82 340 5.16e-45 162
Msa1383990 MtrunA17_Chr4g0042831 44.444 90 44 2 337 425 124 208 7.59e-13 70.1
Msa1383990 MtrunA17_Chr3g0079691 35.395 291 138 7 179 424 272 557 8.98e-45 167
Msa1383990 MtrunA17_Chr3g0079691 49.333 75 33 2 358 428 272 345 4.54e-16 81.3
Msa1383990 MtrunA17_Chr7g0249311 38.516 283 124 8 186 424 178 454 4.95e-44 165
Msa1383990 MtrunA17_Chr7g0249311 35.616 146 85 4 304 442 115 258 6.95e-17 84.0
Msa1383990 MtrunA17_Chr5g0432161 38.492 252 131 5 186 424 243 483 2.78e-43 162
Msa1383990 MtrunA17_Chr7g0263531 34.921 252 155 4 174 422 176 421 1.82e-42 157
Msa1383990 MtrunA17_Chr7g0263531 47.368 76 39 1 361 436 188 262 2.44e-17 84.3
Msa1383990 MtrunA17_Chr7g0243891 39.200 250 121 8 186 428 215 440 1.96e-41 156
Msa1383990 MtrunA17_Chr4g0004911 35.714 252 135 6 175 424 172 398 2.59e-37 144
Msa1383990 MtrunA17_Chr4g0004911 48.438 64 33 0 363 426 185 248 6.03e-15 77.4
Msa1383990 MtrunA17_Chr5g0447701 36.170 235 135 5 188 422 93 312 1.03e-36 140
Msa1383990 MtrunA17_Chr7g0249301 54.430 79 36 0 346 424 276 354 8.01e-26 108
Msa1383990 MtrunA17_Chr7g0249301 42.857 98 54 2 345 442 46 141 9.60e-16 79.0
Msa1383990 MtrunA17_Chr7g0249301 46.914 81 38 3 188 268 63 138 2.42e-12 68.6
Msa1383990 MtrunA17_Chr5g0447711 30.165 242 125 7 188 421 84 289 1.17e-23 101
Msa1383990 MtrunA17_Chr1g0150801 43.956 91 50 1 329 418 68 158 6.29e-22 92.8
Msa1383990 MtrunA17_Chr2g0294231 41.818 110 55 2 345 449 186 291 2.28e-21 95.9
Msa1383990 MtrunA17_Chr4g0051181 50.000 80 39 1 344 422 225 304 1.71e-20 94.4
Msa1383990 MtrunA17_Chr1g0188941 40.476 84 50 0 340 423 29 112 3.71e-20 85.9
Msa1383990 MtrunA17_Chr1g0194481 38.532 109 65 1 315 421 109 217 4.14e-20 91.3
Msa1383990 MtrunA17_Chr7g0216891 42.342 111 51 2 321 418 166 276 4.29e-20 93.6
Msa1383990 MtrunA17_Chr4g0051881 44.231 104 49 2 348 451 164 258 5.92e-20 91.3
Msa1383990 MtrunA17_Chr8g0335811 47.561 82 40 1 340 418 129 210 7.48e-20 88.6
Msa1383990 MtrunA17_Chr4g0060271 50.000 80 39 1 344 422 237 316 1.02e-19 92.8
Msa1383990 MtrunA17_Chr7g0270191 38.889 108 64 1 315 422 100 205 1.60e-19 89.0
Msa1383990 MtrunA17_Chr8g0383251 46.250 80 43 0 343 422 89 168 1.73e-19 86.3
Msa1383990 MtrunA17_Chr4g0053281 57.895 57 23 1 363 418 267 323 2.69e-19 89.4
Msa1383990 MtrunA17_Chr3g0129361 47.945 73 38 0 346 418 128 200 2.92e-19 86.7
Msa1383990 MtrunA17_Chr7g0270831 49.367 79 39 1 344 421 198 276 3.04e-19 90.1
Msa1383990 MtrunA17_Chr3g0099641 39.623 106 55 2 346 450 235 332 5.49e-19 89.7
Msa1383990 MtrunA17_Chr2g0288871 48.052 77 39 1 346 421 289 365 9.03e-19 89.4
Msa1383990 MtrunA17_Chr4g0075201 49.367 79 37 2 346 423 251 327 1.13e-18 89.0
Msa1383990 MtrunA17_Chr2g0302391 33.571 140 83 3 346 484 195 325 1.18e-18 88.6
Msa1383990 MtrunA17_Chr7g0224801 48.000 75 37 1 350 424 81 153 2.20e-18 82.8
Msa1383990 MtrunA17_Chr3g0129321 34.091 132 82 3 292 422 51 178 2.72e-18 83.6
Msa1383990 MtrunA17_Chr7g0238921 47.368 76 39 1 343 418 106 180 2.78e-18 85.9
Msa1383990 MtrunA17_Chr5g0401821 57.895 57 23 1 363 418 200 256 2.93e-18 85.1
Msa1383990 MtrunA17_Chr2g0322391 49.351 77 38 1 346 421 333 409 3.33e-18 87.8
Msa1383990 MtrunA17_Chr8g0383351 47.297 74 38 1 346 418 143 216 5.62e-18 83.2
Msa1383990 MtrunA17_Chr5g0418781 48.000 75 39 0 346 420 108 182 5.94e-18 84.3
Msa1383990 MtrunA17_Chr5g0443131 46.667 75 40 0 348 422 143 217 7.10e-18 84.7
Msa1383990 MtrunA17_Chr8g0386241 30.457 197 102 8 228 424 2 163 9.94e-18 81.3
Msa1383990 MtrunA17_Chr1g0147881 56.140 57 24 1 363 418 263 319 4.01e-17 82.8
Msa1383990 MtrunA17_Chr1g0184691 56.140 57 24 1 363 418 294 350 6.21e-17 82.4
Msa1383990 MtrunA17_Chr1g0202461 43.373 83 45 2 343 424 243 324 6.31e-17 82.8
Msa1383990 MtrunA17_Chr4g0068541 54.545 66 30 0 357 422 203 268 7.86e-17 82.8
Msa1383990 MtrunA17_Chr4g0025061 33.103 145 81 5 347 475 345 489 1.07e-16 83.2
Msa1383990 MtrunA17_Chr4g0071521 53.333 60 27 1 360 418 243 302 1.40e-16 80.9
Msa1383990 MtrunA17_Chr7g0228941 51.613 62 29 1 360 420 50 111 1.81e-16 75.9
Msa1383990 MtrunA17_Chr7g0248721 39.604 101 55 2 318 418 102 196 2.52e-16 78.2
Msa1383990 MtrunA17_Chr3g0136961 40.506 79 45 2 342 418 117 195 3.33e-16 79.3
Msa1383990 MtrunA17_Chr4g0001361 37.391 115 57 4 350 460 149 252 3.88e-16 79.3
Msa1383990 MtrunA17_Chr2g0319961 48.485 66 33 1 363 427 81 146 6.22e-16 77.8
Msa1383990 MtrunA17_Chr6g0485431 50.769 65 31 1 363 426 155 219 9.40e-16 79.0
Msa1383990 MtrunA17_Chr4g0025051 39.796 98 58 1 329 425 302 399 2.12e-15 79.0
Msa1383990 MtrunA17_Chr7g0270051 46.154 65 34 1 359 422 50 114 2.48e-15 76.3
Msa1383990 MtrunA17_Chr8g0379461 52.381 63 29 1 363 424 77 139 3.01e-15 75.5
Msa1383990 MtrunA17_Chr3g0139021 52.459 61 28 1 360 419 312 372 4.58e-15 77.0
Msa1383990 MtrunA17_Chr1g0150281 49.123 57 28 1 363 418 141 197 8.39e-15 75.1
Msa1383990 MtrunA17_Chr2g0333851 47.619 63 32 1 360 421 167 229 1.29e-14 75.1
Msa1383990 MtrunA17_Chr2g0289181 46.875 64 33 1 363 425 15 78 3.81e-14 72.0
Msa1383990 MtrunA17_Chr1g0150271 44.444 63 34 1 360 421 99 161 6.04e-14 72.0
Msa1383990 MtrunA17_Chr8g0348311 40.000 95 50 3 337 426 126 218 6.07e-14 73.2
Msa1383990 MtrunA17_Chr2g0284321 46.032 63 33 1 363 424 36 98 6.14e-14 71.2
Msa1383990 MtrunA17_Chr7g0248691 46.970 66 34 1 360 424 152 217 1.55e-13 71.6
Msa1383990 MtrunA17_Chr1g0189391 42.308 78 44 1 349 425 84 161 1.99e-13 71.6
Msa1383990 MtrunA17_Chr2g0293481 46.269 67 33 2 363 428 268 332 3.28e-13 72.0
Msa1383990 MtrunA17_Chr8g0387501 38.000 100 49 4 359 455 126 215 5.71e-13 69.3
Msa1383990 MtrunA17_Chr5g0432071 36.486 74 46 1 363 436 105 177 1.58e-11 63.9
Msa1383990 MtrunA17_Chr5g0432071 44.737 76 41 1 171 246 88 162 2.78e-11 63.2
Msa1383990 MtrunA17_Chr4g0024391 33.333 96 61 2 329 423 196 289 3.21e-11 65.5
Msa1383990 MtrunA17_Chr5g0419241 55.556 45 20 0 346 390 61 105 4.04e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1383990 AT4G30935.1 48.497 499 199 17 28 520 20 466 3.18e-123 369
Msa1383990 AT2G03340.1 34.278 353 189 11 92 424 148 477 8.75e-51 181
Msa1383990 AT1G13960.2 38.683 243 142 3 185 421 74 315 2.18e-48 171
Msa1383990 AT1G13960.1 34.132 334 202 8 94 421 147 468 6.56e-48 174
Msa1383990 AT4G26640.1 36.149 296 156 6 141 424 97 371 2.73e-47 171
Msa1383990 AT4G26640.1 52.239 67 31 1 360 426 137 202 1.04e-14 77.0
Msa1383990 AT4G26640.7 36.149 296 156 6 141 424 129 403 2.79e-47 172
Msa1383990 AT4G26640.7 52.239 67 31 1 360 426 169 234 9.30e-15 77.4
Msa1383990 AT4G26640.5 36.525 282 150 5 155 424 3 267 3.39e-47 169
Msa1383990 AT4G26640.5 52.239 67 31 1 360 426 33 98 1.10e-14 76.3
Msa1383990 AT4G26640.6 36.525 282 150 5 155 424 3 267 3.39e-47 169
Msa1383990 AT4G26640.6 52.239 67 31 1 360 426 33 98 1.10e-14 76.3
Msa1383990 AT4G26640.4 36.525 282 150 5 155 424 3 267 3.39e-47 169
Msa1383990 AT4G26640.4 52.239 67 31 1 360 426 33 98 1.10e-14 76.3
Msa1383990 AT4G26640.3 36.525 282 150 5 155 424 3 267 3.39e-47 169
Msa1383990 AT4G26640.3 52.239 67 31 1 360 426 33 98 1.10e-14 76.3
Msa1383990 AT4G26640.2 36.149 296 156 6 141 424 169 443 4.41e-47 172
Msa1383990 AT4G26640.2 52.239 67 31 1 360 426 209 274 9.40e-15 77.4
Msa1383990 AT2G38470.1 38.672 256 122 6 188 424 185 424 5.22e-44 163
Msa1383990 AT4G26440.1 37.546 269 129 9 185 424 176 434 2.29e-43 162
Msa1383990 AT4G26440.1 45.714 70 37 1 363 432 179 247 2.99e-13 72.8
Msa1383990 AT5G07100.1 40.816 245 83 9 186 429 116 299 1.32e-42 154
Msa1383990 AT5G07100.2 40.816 245 83 9 186 429 23 206 1.86e-42 151
Msa1383990 AT5G07100.4 40.816 245 83 9 186 429 23 206 1.86e-42 151
Msa1383990 AT5G07100.5 40.816 245 83 9 186 429 23 206 1.86e-42 151
Msa1383990 AT5G07100.3 40.816 245 83 9 186 429 23 206 1.86e-42 151
Msa1383990 AT2G04880.2 34.743 331 170 10 122 421 27 342 1.98e-42 157
Msa1383990 AT2G04880.1 32.948 346 180 10 122 421 27 366 2.84e-39 149
Msa1383990 AT2G04880.1 50.000 60 29 1 363 422 112 170 2.72e-12 69.3
Msa1383990 AT2G30250.1 34.375 256 125 5 186 426 165 392 2.98e-36 139
Msa1383990 AT2G30250.1 49.315 73 36 1 361 433 165 236 3.32e-12 68.6
Msa1383990 AT3G01080.2 35.565 239 114 6 185 421 203 403 1.73e-34 135
Msa1383990 AT3G01080.2 46.753 77 40 1 363 439 206 281 9.76e-15 77.0
Msa1383990 AT2G37260.3 36.965 257 123 8 186 418 84 325 1.23e-33 130
Msa1383990 AT2G37260.2 36.965 257 123 8 186 418 82 323 1.53e-33 130
Msa1383990 AT2G37260.1 36.965 257 123 8 186 418 164 405 2.08e-33 132
Msa1383990 AT5G56270.1 54.762 84 38 0 341 424 466 549 3.16e-25 110
Msa1383990 AT5G56270.1 51.515 66 31 1 363 428 274 338 3.40e-15 79.0
Msa1383990 AT5G56270.1 32.800 125 81 2 131 253 217 340 1.78e-12 70.5
Msa1383990 AT3G01080.1 58.667 75 31 0 347 421 291 365 1.90e-24 106
Msa1383990 AT3G01080.1 46.753 77 40 1 363 439 168 243 1.09e-14 76.6
Msa1383990 AT4G12020.10 35.922 206 110 7 187 382 468 661 3.30e-24 107
Msa1383990 AT4G12020.10 49.153 59 29 1 363 421 469 526 5.78e-12 69.3
Msa1383990 AT4G12020.6 35.922 206 110 7 187 382 468 661 3.56e-24 107
Msa1383990 AT4G12020.6 49.153 59 29 1 363 421 469 526 5.78e-12 69.3
Msa1383990 AT4G12020.8 35.922 206 110 7 187 382 468 661 3.56e-24 107
Msa1383990 AT4G12020.8 49.153 59 29 1 363 421 469 526 5.78e-12 69.3
Msa1383990 AT4G12020.2 35.922 206 110 7 187 382 468 661 3.59e-24 107
Msa1383990 AT4G12020.2 49.153 59 29 1 363 421 469 526 6.10e-12 69.3
Msa1383990 AT4G12020.3 35.922 206 110 7 187 382 468 661 3.65e-24 107
Msa1383990 AT4G12020.3 49.153 59 29 1 363 421 469 526 5.89e-12 69.3
Msa1383990 AT4G12020.4 35.922 206 110 7 187 382 468 661 3.82e-24 107
Msa1383990 AT4G12020.4 49.153 59 29 1 363 421 469 526 6.20e-12 69.3
Msa1383990 AT4G12020.7 35.922 206 110 7 187 382 468 661 4.05e-24 107
Msa1383990 AT4G12020.7 49.153 59 29 1 363 421 469 526 5.74e-12 69.3
Msa1383990 AT4G12020.1 35.922 206 110 7 187 382 468 661 4.16e-24 107
Msa1383990 AT4G12020.1 49.153 59 29 1 363 421 469 526 5.65e-12 69.3
Msa1383990 AT4G12020.9 35.922 206 110 7 187 382 468 661 4.16e-24 107
Msa1383990 AT4G12020.9 49.153 59 29 1 363 421 469 526 5.65e-12 69.3
Msa1383990 AT4G12020.5 35.922 206 110 7 187 382 401 594 4.37e-24 107
Msa1383990 AT4G12020.5 49.153 59 29 1 363 421 402 459 6.50e-12 68.9
Msa1383990 AT4G12020.11 35.922 206 110 7 187 382 468 661 9.45e-24 106
Msa1383990 AT4G12020.11 49.153 59 29 1 363 421 469 526 8.42e-12 68.6
Msa1383990 AT5G41570.1 44.211 95 50 1 324 418 63 154 4.05e-21 91.3
Msa1383990 AT1G55600.1 45.679 81 44 0 341 421 286 366 1.58e-20 95.1
Msa1383990 AT5G49520.1 42.105 95 54 1 346 439 205 299 2.51e-20 93.6
Msa1383990 AT1G69310.4 43.878 98 49 1 346 443 131 222 4.09e-20 91.3
Msa1383990 AT1G69310.2 43.878 98 49 1 346 443 131 222 4.09e-20 91.3
Msa1383990 AT1G69310.1 43.878 98 49 1 346 443 131 222 4.09e-20 91.3
Msa1383990 AT5G26170.1 54.839 62 28 0 357 418 108 169 1.18e-19 87.0
Msa1383990 AT2G23320.1 61.404 57 21 1 363 418 241 297 1.32e-19 90.1
Msa1383990 AT2G44745.1 43.023 86 49 0 333 418 116 201 1.65e-19 87.8
Msa1383990 AT5G13080.1 47.368 76 38 1 349 424 54 127 2.07e-19 85.5
Msa1383990 AT4G04450.2 43.689 103 49 3 346 447 182 276 2.83e-19 90.9
Msa1383990 AT5G15130.2 39.823 113 63 2 346 457 169 277 3.73e-19 90.9
Msa1383990 AT1G68150.1 47.619 84 43 1 340 422 213 296 4.03e-19 89.7
Msa1383990 AT5G15130.1 39.823 113 63 2 346 457 211 319 4.25e-19 90.9
Msa1383990 AT1G64000.1 48.571 70 36 0 349 418 101 170 4.65e-19 85.9
Msa1383990 AT2G24570.1 50.000 78 38 1 363 439 244 321 5.04e-19 88.6
Msa1383990 AT4G04450.1 43.689 103 49 3 346 447 276 370 6.23e-19 90.5
Msa1383990 AT4G18170.1 44.828 87 46 1 342 428 152 236 8.25e-19 87.8
Msa1383990 AT4G22070.4 49.351 77 38 1 346 421 281 357 8.88e-19 89.7
Msa1383990 AT4G22070.3 49.351 77 38 1 346 421 281 357 8.88e-19 89.7
Msa1383990 AT4G22070.2 49.351 77 38 1 346 421 281 357 8.88e-19 89.7
Msa1383990 AT4G22070.1 49.351 77 38 1 346 421 281 357 8.88e-19 89.7
Msa1383990 AT3G01970.1 48.571 70 36 0 349 418 52 121 1.12e-18 83.2
Msa1383990 AT4G24240.1 56.667 60 25 1 360 418 279 338 1.48e-18 87.8
Msa1383990 AT4G39410.1 49.315 73 37 0 346 418 207 279 1.69e-18 86.7
Msa1383990 AT4G01720.1 49.367 79 39 1 344 421 221 299 3.31e-18 87.8
Msa1383990 AT1G62300.1 49.367 79 37 2 346 423 296 372 4.14e-18 87.8
Msa1383990 AT3G04670.1 57.895 57 23 1 363 418 263 319 4.56e-18 85.9
Msa1383990 AT4G31550.2 58.621 58 23 1 363 419 246 303 5.16e-18 85.5
Msa1383990 AT4G31550.1 58.621 58 23 1 363 419 247 304 5.22e-18 85.5
Msa1383990 AT5G28650.1 57.895 57 23 1 363 418 263 319 1.03e-17 84.7
Msa1383990 AT5G43290.1 51.613 62 30 0 359 420 111 172 1.08e-17 84.0
Msa1383990 AT5G46350.1 33.333 156 84 5 325 470 139 284 1.09e-17 84.7
Msa1383990 AT2G47260.1 52.381 63 30 0 363 425 175 237 1.36e-17 84.7
Msa1383990 AT1G29860.1 46.988 83 40 2 363 443 137 217 1.78e-17 83.2
Msa1383990 AT5G64810.1 49.206 63 32 0 358 420 106 168 1.89e-17 81.3
Msa1383990 AT2G46130.1 46.053 76 41 0 343 418 11 86 2.38e-17 78.2
Msa1383990 AT3G62340.1 36.879 141 74 3 345 482 101 229 1.32e-16 80.5
Msa1383990 AT1G29280.1 48.529 68 34 1 356 422 68 135 5.15e-16 78.6
Msa1383990 AT1G18860.1 46.835 79 39 2 346 423 223 299 9.93e-16 80.5
Msa1383990 AT2G30590.1 52.632 57 26 1 363 418 314 370 1.34e-15 79.0
Msa1383990 AT1G69310.3 40.816 98 48 2 346 443 131 218 2.01e-15 77.4
Msa1383990 AT2G21900.1 49.153 59 30 0 363 421 110 168 3.44e-15 74.7
Msa1383990 AT3G01080.3 46.753 77 40 1 363 439 206 281 4.49e-15 77.0
Msa1383990 AT4G31800.2 45.000 60 32 1 363 421 112 171 1.49e-14 73.9
Msa1383990 AT5G52830.1 50.000 64 31 1 360 422 163 226 1.76e-14 75.5
Msa1383990 AT4G31800.1 45.000 60 32 1 363 421 177 236 2.01e-14 74.7
Msa1383990 AT4G23550.1 42.857 77 43 1 349 424 127 203 2.19e-14 74.7
Msa1383990 AT4G01250.1 45.000 80 40 3 349 427 116 192 4.40e-14 73.6
Msa1383990 AT2G25000.2 45.000 60 32 1 363 421 104 163 5.96e-14 72.0
Msa1383990 AT2G25000.4 45.000 60 32 1 363 421 104 163 5.96e-14 72.0
Msa1383990 AT1G80840.1 38.356 73 44 1 350 421 134 206 6.72e-14 73.2
Msa1383990 AT1G69810.2 45.570 79 41 2 346 422 129 207 8.33e-14 73.2
Msa1383990 AT1G69810.1 45.570 79 41 2 346 422 187 265 8.89e-14 73.6
Msa1383990 AT2G25000.3 45.000 60 32 1 363 421 126 185 1.19e-13 71.2
Msa1383990 AT3G58710.2 33.594 128 77 2 295 421 10 130 1.28e-13 71.6
Msa1383990 AT2G25000.1 45.000 60 32 1 363 421 147 206 1.40e-13 71.6
Msa1383990 AT3G58710.1 47.761 67 34 1 356 421 65 131 1.62e-13 71.2
Msa1383990 AT2G34830.1 43.421 76 39 3 354 428 208 280 1.67e-13 72.8
Msa1383990 AT2G34830.2 43.421 76 39 3 354 428 217 289 1.76e-13 72.8
Msa1383990 AT1G30650.1 43.056 72 39 2 354 424 210 280 1.06e-12 70.5
Msa1383990 AT2G46130.2 42.105 76 40 1 343 418 11 82 1.55e-12 64.3
Msa1383990 AT5G45050.1 45.588 68 34 2 361 427 1179 1244 3.03e-11 67.0
Msa1383990 AT5G45050.4 45.588 68 34 2 361 427 1040 1105 3.09e-11 66.6
Msa1383990 AT5G45050.2 45.588 68 34 2 361 427 1151 1216 3.10e-11 67.0

Find 135 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAACCGAATTCAGCGTATT+AGG 0.178386 tig0020633:-31966 None:intergenic
GGATTCAACTGGCGGAAATA+TGG 0.214937 tig0020633:+33338 Msa1383990:CDS
CCAAAGATGGAAAAGCAATT+AGG 0.223190 tig0020633:-31818 None:intergenic
GGTTGTCAAATCCGAAATTA+AGG 0.234424 tig0020633:+31983 Msa1383990:CDS
ACGCGGACTTGCCTTCGTTT+TGG 0.267382 tig0020633:-33743 None:intergenic
CAACCGAATTCAGCGTATTA+GGG 0.297461 tig0020633:-31965 None:intergenic
CAAAGATGGAAAAGCAATTA+GGG 0.304686 tig0020633:-31817 None:intergenic
AAATTATCTAACCTTAATTT+CGG 0.308223 tig0020633:-31994 None:intergenic
CCGGGGAAGCCAAGGACCTT+GGG 0.325495 tig0020633:+36144 Msa1383990:CDS
CGGCCTGAGCTGAAGGTTCC+TGG 0.331309 tig0020633:-33094 None:intergenic
GGATACCGATGGCGCAAGTA+TGG 0.334207 tig0020633:+33973 Msa1383990:CDS
AGGTGTTTCTTCTTGAGCTT+TGG 0.353643 tig0020633:-33630 None:intergenic
CGCAAACTTACTTTCCCTAA+TGG 0.358180 tig0020633:-33525 None:intergenic
GCGCAAGTATGGACAGAAAA+TGG 0.361245 tig0020633:+33984 Msa1383990:CDS
ACTCAACTGCAAATTATTCA+TGG 0.361645 tig0020633:-36054 None:intergenic
GCAGGAGATGTGGGGATATC+TGG 0.371320 tig0020633:+33946 Msa1383990:CDS
CAGGTTCTCGAAGCTATTAC+AGG 0.382750 tig0020633:+33387 Msa1383990:CDS
ACGGAAGATTAGTTCCATTA+GGG 0.383627 tig0020633:+33511 Msa1383990:CDS
GCCGGTCTCTTGTAATTTCA+CGG 0.389064 tig0020633:+36278 Msa1383990:three_prime_UTR
ATTGAATGCTGGGATCATTC+AGG 0.394765 tig0020633:+33440 Msa1383990:CDS
AGACATATTCTGTATTTGTA+TGG 0.407890 tig0020633:-33210 None:intergenic
CACGGAAGATTAGTTCCATT+AGG 0.408040 tig0020633:+33510 Msa1383990:CDS
TGCTGCATGTACAACAAACT+TGG 0.409694 tig0020633:-33926 None:intergenic
CCATCAGATGATGGTGTCCT+TGG 0.410812 tig0020633:-33317 None:intergenic
CCCAAGGTCCTTGGCTTCCC+CGG 0.414124 tig0020633:-36144 None:intergenic
GGTGGGCCGTGTCGTTTCTT+CGG 0.415960 tig0020633:-35936 None:intergenic
TTCTTGAGCTTTGGAAGATG+TGG 0.417147 tig0020633:-33621 None:intergenic
GTCTCAATGTGCTTTCGAAC+AGG 0.417742 tig0020633:-35846 None:intergenic
TGGGCACAGCAAATTATTCA+TGG 0.422354 tig0020633:-35994 None:intergenic
TGTCTTCTGTTTCTGTTCCA+AGG 0.425869 tig0020633:+33300 Msa1383990:CDS
ACCGGGGAAGCCAAGGACCT+TGG 0.430810 tig0020633:+36143 Msa1383990:CDS
AATCCCTAATACGCTGAATT+CGG 0.433253 tig0020633:+31962 Msa1383990:CDS
CTCTGCAGTCGGTTCGTTGG+AGG 0.433498 tig0020633:-33549 None:intergenic
ATCAGAAAATTTCTACTCAA+TGG 0.437791 tig0020633:+36096 Msa1383990:CDS
GGTGCTGCAGCAGCCACAAG+AGG 0.441768 tig0020633:-35966 None:intergenic
TTTCTGTGTCTAAGTTTCCA+TGG 0.447504 tig0020633:+31629 Msa1383990:exon
ATATTCTGTATTTGTATGGT+TGG 0.451171 tig0020633:-33206 None:intergenic
TTCCCCGGTTAGTTCTCCTT+CGG 0.452841 tig0020633:-36129 None:intergenic
TACTACAGATGCACTTCTGC+TGG 0.452929 tig0020633:+35819 Msa1383990:CDS
GTGGATGGATCAGAATCTTT+CGG 0.455352 tig0020633:-33602 None:intergenic
TGCTAAAAGAGAAGCTGTCC+AGG 0.461739 tig0020633:+33076 Msa1383990:CDS
GATTCAACTGGCGGAAATAT+GGG 0.464037 tig0020633:+33339 Msa1383990:CDS
TCTGTCCATACTTGCGCCAT+CGG 0.468804 tig0020633:-33978 None:intergenic
CGTTGATCCAAAACCAAAGA+TGG 0.472386 tig0020633:-31831 None:intergenic
AGAAGCTGAGTGGGTCCCAC+AGG 0.472843 tig0020633:-31678 None:intergenic
TAATTTGCAGTTGAGTAAAC+CGG 0.477622 tig0020633:+36061 Msa1383990:CDS
GTTCTCTGCAGTCGGTTCGT+TGG 0.479965 tig0020633:-33552 None:intergenic
GAATCTTTCGGAGCATTGAC+AGG 0.481035 tig0020633:-33590 None:intergenic
TGTATTTGTATGGTTGGACT+AGG 0.483789 tig0020633:-33200 None:intergenic
TCATCTGATATCAATGGTAA+TGG 0.485405 tig0020633:+33680 Msa1383990:CDS
GACACCGAAGGAGAACTAAC+CGG 0.487157 tig0020633:+36125 Msa1383990:CDS
GCTGACGGTGATTCGCCGAC+TGG 0.493066 tig0020633:-31738 None:intergenic
TGTCCAGGAACCTTCAGCTC+AGG 0.494745 tig0020633:+33091 Msa1383990:CDS
AAAGACCTTTACCTGGGATG+TGG 0.496114 tig0020633:-34018 None:intergenic
TCTGCAGTCGGTTCGTTGGA+GGG 0.497315 tig0020633:-33548 None:intergenic
TGCTAAGAAGATTGAATGCT+GGG 0.499049 tig0020633:+33430 Msa1383990:CDS
CATCATCTGATGGATTCAAC+TGG 0.499437 tig0020633:+33327 Msa1383990:CDS
CCCACCAAGTGCTCCTCTTG+TGG 0.499953 tig0020633:+36013 Msa1383990:CDS
TGCTGTCATCATAACTTACA+AGG 0.506337 tig0020633:+35887 Msa1383990:CDS
AAGTTTGTTGTACATGCAGC+AGG 0.506685 tig0020633:+33928 Msa1383990:CDS
CAGAAAGGAGAAAGGTGACT+TGG 0.514032 tig0020633:+33867 Msa1383990:intron
TCGTGTTTGTTGAATTTCCA+CGG 0.514282 tig0020633:-31549 None:intergenic
GGAACAAGTATAGAATTGAT+TGG 0.519243 tig0020633:+36424 Msa1383990:three_prime_UTR
CCCACCAAGTGCTCCTCTTG+TGG 0.523692 tig0020633:+35953 Msa1383990:CDS
ACACCGAAGGAGAACTAACC+GGG 0.523728 tig0020633:+36126 Msa1383990:CDS
GGGTCCCACAGGGAGAGCTT+CGG 0.524421 tig0020633:-31667 None:intergenic
CAAAACTCATCTGATATCAA+TGG 0.525848 tig0020633:+33674 Msa1383990:CDS
TGGACCTCTTGAAAATGAAA+AGG 0.527268 tig0020633:+33049 Msa1383990:CDS
TGCAAATTATTCATGGAGGC+AGG 0.533719 tig0020633:-36047 None:intergenic
AGCAAATTATTCATGGAGGC+AGG 0.536158 tig0020633:-35987 None:intergenic
GCCACAAGAGGAGCACTTGG+TGG 0.539995 tig0020633:-35954 None:intergenic
TTTGGTGATAGTTCAGATGG+TGG 0.547468 tig0020633:-33149 None:intergenic
ATTGGCATAATCTATTTACA+TGG 0.548102 tig0020633:+36442 Msa1383990:three_prime_UTR
TTTCATGCTCAGGAAACGGT+TGG 0.552316 tig0020633:+33029 Msa1383990:intron
TTCTGCGACTCGGTGGCTGA+CGG 0.553411 tig0020633:-31753 None:intergenic
GAATTTGGTGATAGTTCAGA+TGG 0.554364 tig0020633:-33152 None:intergenic
AGAACTAACCGGGGAAGCCA+AGG 0.555363 tig0020633:+36136 Msa1383990:CDS
GCCGTGAAATTACAAGAGAC+CGG 0.557742 tig0020633:-36279 None:intergenic
GCCACAAGAGGAGCACTTGG+TGG 0.560730 tig0020633:-36014 None:intergenic
TAATGGAACTAATCTTCCGT+GGG 0.563190 tig0020633:-33508 None:intergenic
TAGCTTCGAGAACCTGTAGT+AGG 0.565059 tig0020633:-33380 None:intergenic
CGGGGAAGCCAAGGACCTTG+GGG 0.569355 tig0020633:+36145 Msa1383990:CDS
GCAGCCACAAGAGGAGCACT+TGG 0.569920 tig0020633:-35957 None:intergenic
TAATATATAAATTAGATAGC+CGG 0.571026 tig0020633:+36260 Msa1383990:three_prime_UTR
CCACAAGAGGAGCACTTGGT+GGG 0.571996 tig0020633:-36013 None:intergenic
GACAGCATCTGAGTTGTCTA+CGG 0.572444 tig0020633:-35871 None:intergenic
CCAAGGACACCATCATCTGA+TGG 0.573655 tig0020633:+33317 Msa1383990:CDS
CAGTTGAATCCATCAGATGA+TGG 0.574887 tig0020633:-33326 None:intergenic
CAAGTTAAGAGTCCTACTAC+AGG 0.575076 tig0020633:+33368 Msa1383990:CDS
ATTTATATATTACAACTGCA+TGG 0.576455 tig0020633:-36249 None:intergenic
AAGACCTTTACCTGGGATGT+GGG 0.577183 tig0020633:-34017 None:intergenic
TGTTCTGGGAGAAGCTGAGT+GGG 0.577794 tig0020633:-31687 None:intergenic
GTTGATTTCACAGATGTGCA+AGG 0.578017 tig0020633:+31939 Msa1383990:intron
TGAGCTTTGGAAGATGTGGA+TGG 0.579447 tig0020633:-33617 None:intergenic
GCTGCATGTACAACAAACTT+GGG 0.581848 tig0020633:-33925 None:intergenic
TTGATAACCAGAAAGGAGAA+AGG 0.582120 tig0020633:+33859 Msa1383990:intron
TTGTATGGTTGGACTAGGAA+CGG 0.583444 tig0020633:-33195 None:intergenic
CCACAAGAGGAGCACTTGGT+GGG 0.590936 tig0020633:-35953 None:intergenic
AGTCACTTGAAGCTGCTCTT+CGG 0.591198 tig0020633:-33114 None:intergenic
GGTGCTGCATCAGCCACAAG+AGG 0.591740 tig0020633:-36026 None:intergenic
GTGCTAAGAAGATTGAATGC+TGG 0.592242 tig0020633:+33429 Msa1383990:CDS
CTAATGGAACTAATCTTCCG+TGG 0.592547 tig0020633:-33509 None:intergenic
GGAGACGCGATGCTCAGCCA+TGG 0.594531 tig0020633:-31646 None:intergenic
GATGTGGGGATATCTGGTGA+TGG 0.598874 tig0020633:+33952 Msa1383990:CDS
TCAGCCACAAGAGGAGCACT+TGG 0.605078 tig0020633:-36017 None:intergenic
ATTGACTCGCTCACTCACTC+AGG 0.608264 tig0020633:-31478 None:intergenic
GTACATGCAGCAGGAGATGT+GGG 0.608887 tig0020633:+33937 Msa1383990:CDS
TGAAGGGTAACCCACATCCC+AGG 0.609054 tig0020633:+34007 Msa1383990:CDS
ACAGGCGTATTACTAACGAT+TGG 0.613651 tig0020633:-33236 None:intergenic
AAAACACTGTTCTCTGCAGT+CGG 0.615994 tig0020633:-33560 None:intergenic
GTATGGACAGAAAATGGTGA+AGG 0.618010 tig0020633:+33990 Msa1383990:CDS
CATCTGATGGATTCAACTGG+CGG 0.620518 tig0020633:+33330 Msa1383990:CDS
TATGGACAGAAAATGGTGAA+GGG 0.621435 tig0020633:+33991 Msa1383990:CDS
GGTTTCTTGTCAGAACTGCA+AGG 0.624573 tig0020633:-33650 None:intergenic
TCTGAATGATGAATTCAGCA+AGG 0.627601 tig0020633:-36224 None:intergenic
CGTCTCCGAAGCTCTCCCTG+TGG 0.630117 tig0020633:+31662 Msa1383990:CDS
GGGGAAGCCAAGGACCTTGG+GGG 0.641628 tig0020633:+36146 Msa1383990:CDS
TGGAACAGAAACAGAAGACA+AGG 0.643346 tig0020633:-33297 None:intergenic
AATTTCTACTCAATGGTCAG+TGG 0.645416 tig0020633:+36103 Msa1383990:CDS
TTGTTCTGGGAGAAGCTGAG+TGG 0.645709 tig0020633:-31688 None:intergenic
CAATGGTCAGTGGACACCGA+AGG 0.651277 tig0020633:+36113 Msa1383990:CDS
TGTACATGCAGCAGGAGATG+TGG 0.652491 tig0020633:+33936 Msa1383990:CDS
GAAGCTGAGTGGGTCCCACA+GGG 0.663562 tig0020633:-31677 None:intergenic
GCTGTCATCATAACTTACAA+GGG 0.670071 tig0020633:+35888 Msa1383990:CDS
ACACACTCACACATAAACCG+TGG 0.687653 tig0020633:+31532 Msa1383990:five_prime_UTR
AATCGTTAGTAATACGCCTG+TGG 0.690746 tig0020633:+33238 Msa1383990:CDS
TACATGCAGCAGGAGATGTG+GGG 0.691459 tig0020633:+33938 Msa1383990:CDS
ACGAGCCAGATCCAAAACGA+AGG 0.695030 tig0020633:+33732 Msa1383990:CDS
TATCTGGTGATGGATACCGA+TGG 0.698652 tig0020633:+33962 Msa1383990:CDS
CCTGTGCCGAAGAAACGACA+CGG 0.708728 tig0020633:+35930 Msa1383990:CDS
ATGGAACTAATCTTCCGTGG+GGG 0.722546 tig0020633:-33506 None:intergenic
CAACTGCAAATTATTCATGG+AGG 0.726603 tig0020633:-36051 None:intergenic
AATGGAACTAATCTTCCGTG+GGG 0.732859 tig0020633:-33507 None:intergenic
CACCGAAGGAGAACTAACCG+GGG 0.738224 tig0020633:+36127 Msa1383990:CDS
GCACAGCAAATTATTCATGG+AGG 0.739037 tig0020633:-35991 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTGTTCATAAATTTATA+TGG + tig0020633:34336-34355 Msa1383990:intron 10.0%
!! AATCAAATAAATTAAACTTA+AGG - tig0020633:34539-34558 None:intergenic 10.0%
!! ATATATAAATGTAAGTATAT+TGG + tig0020633:34923-34942 Msa1383990:intron 10.0%
!! AAATTATCTAACCTTAATTT+CGG - tig0020633:31997-32016 None:intergenic 15.0%
!! ACAAAATAAATAATAACCAA+AGG - tig0020633:34076-34095 None:intergenic 15.0%
!! AATATTGTCATATTATCTTA+GGG + tig0020633:34428-34447 Msa1383990:intron 15.0%
!! ATGATAGTATATAAATGTTA+AGG + tig0020633:34899-34918 Msa1383990:intron 15.0%
!! TTAATATCATTCATATAAAC+AGG - tig0020633:35708-35727 None:intergenic 15.0%
!! TAATATATAAATTAGATAGC+CGG + tig0020633:36260-36279 Msa1383990:three_prime_UTR 15.0%
!!! TTTTTTTTTGTTGCTGAAAA+AGG - tig0020633:31892-31911 None:intergenic 20.0%
!! GAAAAAAATTGTGAATTGTT+TGG + tig0020633:31917-31936 Msa1383990:intron 20.0%
!! ACGGTAATAAAGTTAAAATT+TGG - tig0020633:32026-32045 None:intergenic 20.0%
!! TCTGTTTCAATAAAATAACA+CGG - tig0020633:32045-32064 None:intergenic 20.0%
!!! TTGAAAAGTTTGTTTGATTA+GGG + tig0020633:32208-32227 Msa1383990:intron 20.0%
!! TGCTTTATAGATTATGAATT+TGG + tig0020633:32351-32370 Msa1383990:intron 20.0%
!!! TTGTTAAATGCTTCTATTTT+TGG + tig0020633:32392-32411 Msa1383990:intron 20.0%
!! TTTATTAGTACAAAATCTAC+AGG + tig0020633:32813-32832 Msa1383990:intron 20.0%
!!! AAAGATTTTGTAACAGAATT+TGG - tig0020633:33170-33189 None:intergenic 20.0%
!! AAATAATATGATTTCATACG+CGG - tig0020633:33763-33782 None:intergenic 20.0%
!!! ATTTAATTTGATAACCAGAA+AGG + tig0020633:33852-33871 Msa1383990:intron 20.0%
!! ATATTATGAAAGTTGAGTTT+AGG + tig0020633:34147-34166 Msa1383990:intron 20.0%
!! TGTTCATAAATTTATATGGA+TGG + tig0020633:34340-34359 Msa1383990:intron 20.0%
!! GAATATTGTCATATTATCTT+AGG + tig0020633:34427-34446 Msa1383990:intron 20.0%
!!! AGTCAAATTTATCTAGAATT+TGG - tig0020633:34464-34483 None:intergenic 20.0%
!!! TTGCAACTTTTTATTTTTGA+AGG + tig0020633:34613-34632 Msa1383990:intron 20.0%
!!! ATTTTGTGCATGTTTATATT+TGG + tig0020633:34643-34662 Msa1383990:intron 20.0%
!! AAGTTAAGCTAAAACAAATA+TGG + tig0020633:34744-34763 Msa1383990:intron 20.0%
!! GTGTTAAATTAATACATGAA+AGG + tig0020633:34772-34791 Msa1383990:intron 20.0%
!!! TTGTTTCTTACTTTGAAATA+CGG + tig0020633:35168-35187 Msa1383990:intron 20.0%
!! ATGGATAGAATAAAAAACTT+GGG + tig0020633:35486-35505 Msa1383990:intron 20.0%
!! AGAAAAGGAAAAAAATTCAA+TGG - tig0020633:35789-35808 None:intergenic 20.0%
!! ATTTATATATTACAACTGCA+TGG - tig0020633:36252-36271 None:intergenic 20.0%
!!! TATCTTTTATTCTTGATTCT+TGG + tig0020633:36312-36331 Msa1383990:three_prime_UTR 20.0%
! AAAAGCTCAAGAGATAAAAA+AGG + tig0020633:31713-31732 Msa1383990:CDS 25.0%
!! TTCGAATTTTCATTAGAACT+CGG - tig0020633:31789-31808 None:intergenic 25.0%
!! CTAATCAAACAAACTTTTCA+AGG - tig0020633:32209-32228 None:intergenic 25.0%
!! CTTGAAAAGTTTGTTTGATT+AGG + tig0020633:32207-32226 Msa1383990:intron 25.0%
!! TAGATTATGAATTTGGAATC+TGG + tig0020633:32358-32377 Msa1383990:intron 25.0%
!!! TAAATGCTTCTATTTTTGGT+AGG + tig0020633:32396-32415 Msa1383990:intron 25.0%
!!! AAATGCTTCTATTTTTGGTA+GGG + tig0020633:32397-32416 Msa1383990:intron 25.0%
!! GTTTAGGACTTAGTTATTAT+AGG + tig0020633:32419-32438 Msa1383990:intron 25.0%
!! AATTCATTCCTCCTTTTTAT+GGG - tig0020633:32534-32553 None:intergenic 25.0%
!! AAATTCATTCCTCCTTTTTA+TGG - tig0020633:32535-32554 None:intergenic 25.0%
!! ATTCAACTTTTATGCGATTT+TGG - tig0020633:32616-32635 None:intergenic 25.0%
!! AAAACTTGAAGTCTCAATTT+TGG - tig0020633:32668-32687 None:intergenic 25.0%
!!! TGAATTCTGAATTTTAACAC+TGG + tig0020633:32752-32771 Msa1383990:intron 25.0%
!! GAGTTTTCATCTAACAAATT+AGG + tig0020633:32864-32883 Msa1383990:intron 25.0%
! CTAAAGAAATCAAATACCTT+GGG - tig0020633:32995-33014 None:intergenic 25.0%
! TGATTTCTTTAGCACTAAAT+AGG + tig0020633:33003-33022 Msa1383990:intron 25.0%
! ATATTCTGTATTTGTATGGT+TGG - tig0020633:33209-33228 None:intergenic 25.0%
! AGACATATTCTGTATTTGTA+TGG - tig0020633:33213-33232 None:intergenic 25.0%
!!! GTAAACAAAAAAAGTACTTC+TGG + tig0020633:33266-33285 Msa1383990:CDS 25.0%
!!! AAGCCCATTTATTTTAATTG+TGG + tig0020633:33803-33822 Msa1383990:intron 25.0%
! CTGCCACAATTAAAATAAAT+GGG - tig0020633:33809-33828 None:intergenic 25.0%
! AAACAGAAATTATGCATACT+TGG - tig0020633:34053-34072 None:intergenic 25.0%
! AGTAGAAAAGAAAGCAAAAA+AGG - tig0020633:34300-34319 None:intergenic 25.0%
!! ATAATGTGTAATTTGTATCG+TGG + tig0020633:34950-34969 Msa1383990:intron 25.0%
! GATAAATTACTATAGCCTAT+TGG + tig0020633:34995-35014 Msa1383990:intron 25.0%
! TGTTTCACAATTTAACCAAT+AGG - tig0020633:35013-35032 None:intergenic 25.0%
! ATTTCAAAGTAAGAAACAAG+TGG - tig0020633:35167-35186 None:intergenic 25.0%
!!! TGTTTCTTACTTTGAAATAC+GGG + tig0020633:35169-35188 Msa1383990:intron 25.0%
! AATTCAAAGTAAGAAACATG+TGG - tig0020633:35234-35253 None:intergenic 25.0%
! ATGTTTCTTACTTTGAATTC+CGG + tig0020633:35235-35254 Msa1383990:intron 25.0%
! GTTACATTCATAGAAGTTTA+CGG - tig0020633:35384-35403 None:intergenic 25.0%
! CATGGATAGAATAAAAAACT+TGG + tig0020633:35485-35504 Msa1383990:intron 25.0%
! TGGATAGAATAAAAAACTTG+GGG + tig0020633:35487-35506 Msa1383990:intron 25.0%
!! AGATACATTTTGTAGAACAA+GGG - tig0020633:35579-35598 None:intergenic 25.0%
!! TAGATACATTTTGTAGAACA+AGG - tig0020633:35580-35599 None:intergenic 25.0%
! TATCTTCAAGAAAATGTATC+CGG + tig0020633:35640-35659 Msa1383990:intron 25.0%
!!! TATTTGCCAAACTGATTTTT+CGG + tig0020633:35670-35689 Msa1383990:intron 25.0%
! TAGTAGTTTCTGATAAGAAA+AGG - tig0020633:35804-35823 None:intergenic 25.0%
!! GTAGAAATTTTCTGATTTTG+TGG - tig0020633:36092-36111 None:intergenic 25.0%
! ATCAGAAAATTTCTACTCAA+TGG + tig0020633:36096-36115 Msa1383990:CDS 25.0%
!!! TTTTTTCTCATGTAGTTTAG+TGG + tig0020633:36335-36354 Msa1383990:three_prime_UTR 25.0%
CAAAGATGGAAAAGCAATTA+GGG - tig0020633:31820-31839 None:intergenic 30.0%
! TTTAGGGCATGGTTATAATT+GGG + tig0020633:32175-32194 Msa1383990:intron 30.0%
TTGAATGTAATACCCTTATG+TGG + tig0020633:32234-32253 Msa1383990:intron 30.0%
TTCTCAGATTCAGAACAAAA+AGG - tig0020633:32307-32326 None:intergenic 30.0%
! TTGTTCTGAATCTGAGAATA+AGG + tig0020633:32309-32328 Msa1383990:intron 30.0%
!!! TTCTATTTTTGGTAGGGTTT+AGG + tig0020633:32403-32422 Msa1383990:intron 30.0%
!! TTTTGACTGATCCCATAAAA+AGG + tig0020633:32520-32539 Msa1383990:intron 30.0%
! TGAAGTCTCAATTTTGGATA+TGG - tig0020633:32662-32681 None:intergenic 30.0%
AATTCAGCATTTAAGCTACT+GGG - tig0020633:32738-32757 None:intergenic 30.0%
GTACAAATGAAATGTCTATC+CGG + tig0020633:32783-32802 Msa1383990:intron 30.0%
AAGAAATACTGTCTTGTCTT+GGG - tig0020633:32932-32951 None:intergenic 30.0%
GCTAAAGAAATCAAATACCT+TGG - tig0020633:32996-33015 None:intergenic 30.0%
!! ACTTCCTTTTCATTTTCAAG+AGG - tig0020633:33056-33075 None:intergenic 30.0%
!! AACAAAAAAAGTACTTCTGG+CGG + tig0020633:33269-33288 Msa1383990:CDS 30.0%
! TTGATATCAGATGAGTTTTG+TGG - tig0020633:33674-33693 None:intergenic 30.0%
CAAAACTCATCTGATATCAA+TGG + tig0020633:33674-33693 Msa1383990:CDS 30.0%
TCATCTGATATCAATGGTAA+TGG + tig0020633:33680-33699 Msa1383990:CDS 30.0%
!!! TGGTAAAATAGTTTTGAACG+AGG + tig0020633:33700-33719 Msa1383990:CDS 30.0%
CCTGCCACAATTAAAATAAA+TGG - tig0020633:33810-33829 None:intergenic 30.0%
!!! CCATTTATTTTAATTGTGGC+AGG + tig0020633:33807-33826 Msa1383990:intron 30.0%
TGCATAATTTCTGTTTCCTT+TGG + tig0020633:34057-34076 Msa1383990:intron 30.0%
AAGCAGTTTGAAAAATGACA+AGG + tig0020633:34251-34270 Msa1383990:intron 30.0%
GACAAATTACTATAGCCTAT+AGG + tig0020633:34799-34818 Msa1383990:intron 30.0%
! GTTTAACTTAGACCAATAAG+TGG + tig0020633:34866-34885 Msa1383990:intron 30.0%
TGGTTAAATTGTGAAACAAG+AGG + tig0020633:35015-35034 Msa1383990:intron 30.0%
CAATATTTACCAACTTACCT+AGG - tig0020633:35041-35060 None:intergenic 30.0%
!! GTTTCTTACTTTGAAATACG+GGG + tig0020633:35170-35189 Msa1383990:intron 30.0%
TGTTTCTTACTTTGAATTCC+GGG + tig0020633:35236-35255 Msa1383990:intron 30.0%
! TGTATTTTCTTGAGGAAACA+TGG - tig0020633:35280-35299 None:intergenic 30.0%
TCTAACATCAACACATCATA+TGG - tig0020633:35406-35425 None:intergenic 30.0%
GGATAGAATAAAAAACTTGG+GGG + tig0020633:35488-35507 Msa1383990:intron 30.0%
CAAAATGTATCTATCCATCA+TGG + tig0020633:35587-35606 Msa1383990:intron 30.0%
GATACATAATACTACCATGA+TGG - tig0020633:35604-35623 None:intergenic 30.0%
ATGGTAGTATTATGTATCCA+TGG + tig0020633:35606-35625 Msa1383990:intron 30.0%
! GTTTGGCAAATAATTTTGTC+CGG - tig0020633:35662-35681 None:intergenic 30.0%
AAAAAGCCGAAAAATCAGTT+TGG - tig0020633:35679-35698 None:intergenic 30.0%
!!! AGCTCACTTTTTTCCTTTTA+CGG + tig0020633:35728-35747 Msa1383990:intron 30.0%
!! TTTTTCCTTTTACGGATTGT+TGG + tig0020633:35736-35755 Msa1383990:intron 30.0%
ACTCAACTGCAAATTATTCA+TGG - tig0020633:36057-36076 None:intergenic 30.0%
! TAATTTGCAGTTGAGTAAAC+CGG + tig0020633:36061-36080 Msa1383990:CDS 30.0%
GGAACAAGTATAGAATTGAT+TGG + tig0020633:36424-36443 Msa1383990:three_prime_UTR 30.0%
! TCGTGTTTGTTGAATTTCCA+CGG - tig0020633:31552-31571 None:intergenic 35.0%
TTTCTGTGTCTAAGTTTCCA+TGG + tig0020633:31629-31648 Msa1383990:exon 35.0%
!!! CTTGAGCTTTTTGTTGTTCT+GGG - tig0020633:31704-31723 None:intergenic 35.0%
!!! TCTTGAGCTTTTTGTTGTTC+TGG - tig0020633:31705-31724 None:intergenic 35.0%
GAGATAAAAAAGGAACCAGT+CGG + tig0020633:31723-31742 Msa1383990:CDS 35.0%
!! TAATTCACTTTTCTGCGACT+CGG - tig0020633:31766-31785 None:intergenic 35.0%
CCAAAGATGGAAAAGCAATT+AGG - tig0020633:31821-31840 None:intergenic 35.0%
!! CCTAATTGCTTTTCCATCTT+TGG + tig0020633:31818-31837 Msa1383990:CDS 35.0%
!! TGCTTTTCCATCTTTGGTTT+TGG + tig0020633:31824-31843 Msa1383990:CDS 35.0%
!! GTTTTGGATCAACGTAGTTT+CGG + tig0020633:31840-31859 Msa1383990:CDS 35.0%
GATAAACAGAGTGGAAATTG+AGG - tig0020633:31870-31889 None:intergenic 35.0%
CTGAAAAAGGATAAACAGAG+TGG - tig0020633:31879-31898 None:intergenic 35.0%
AATCCCTAATACGCTGAATT+CGG + tig0020633:31962-31981 Msa1383990:CDS 35.0%
GGTTGTCAAATCCGAAATTA+AGG + tig0020633:31983-32002 Msa1383990:CDS 35.0%
! GTTTAGGGCATGGTTATAAT+TGG + tig0020633:32174-32193 Msa1383990:intron 35.0%
TTAGGGCATGGTTATAATTG+GGG + tig0020633:32176-32195 Msa1383990:intron 35.0%
AATAGACCGAAAATCGAAAC+AGG - tig0020633:32463-32482 None:intergenic 35.0%
TGATTAAGCTGAAGCTTCTA+AGG - tig0020633:32490-32509 None:intergenic 35.0%
TGATCTTCGTGAAGATTCTT+AGG + tig0020633:32702-32721 Msa1383990:intron 35.0%
GAATTCAGCATTTAAGCTAC+TGG - tig0020633:32739-32758 None:intergenic 35.0%
TGTACTAATAAATGCGCTAC+CGG - tig0020633:32805-32824 None:intergenic 35.0%
GAAGAAATACTGTCTTGTCT+TGG - tig0020633:32933-32952 None:intergenic 35.0%
TGTATGTTATGTACATCCCA+AGG + tig0020633:32976-32995 Msa1383990:intron 35.0%
TGGACCTCTTGAAAATGAAA+AGG + tig0020633:33049-33068 Msa1383990:CDS 35.0%
! GAATTTGGTGATAGTTCAGA+TGG - tig0020633:33155-33174 None:intergenic 35.0%
TGTATTTGTATGGTTGGACT+AGG - tig0020633:33203-33222 None:intergenic 35.0%
!! TTTTTGTTTACTTCTGCCAC+AGG - tig0020633:33257-33276 None:intergenic 35.0%
TGCTAAGAAGATTGAATGCT+GGG + tig0020633:33430-33449 Msa1383990:CDS 35.0%
TAATGGAACTAATCTTCCGT+GGG - tig0020633:33511-33530 None:intergenic 35.0%
! ACGGAAGATTAGTTCCATTA+GGG + tig0020633:33511-33530 Msa1383990:CDS 35.0%
! TTGATAACCAGAAAGGAGAA+AGG + tig0020633:33859-33878 Msa1383990:intron 35.0%
! ACAAACTTGGGTTTCTTTTC+AGG - tig0020633:33916-33935 None:intergenic 35.0%
TATGGACAGAAAATGGTGAA+GGG + tig0020633:33991-34010 Msa1383990:CDS 35.0%
! AATTATGCATACTTGGCTTG+TGG - tig0020633:34046-34065 None:intergenic 35.0%
!!! GCAGCTTGCAACTTTTTTAT+TGG - tig0020633:34218-34237 None:intergenic 35.0%
TGTTTCATAAGCTGACCTAT+AGG - tig0020633:34817-34836 None:intergenic 35.0%
AACAAGAGGCTAAGATAAGT+TGG + tig0020633:34833-34852 Msa1383990:intron 35.0%
TAACTTAGACCAATAAGTGG+CGG + tig0020633:34869-34888 Msa1383990:intron 35.0%
!!! TAGAGGGGGTCAATTTTTTA+TGG + tig0020633:35078-35097 Msa1383990:intron 35.0%
TAAACCACTATACCAATGGT+AGG - tig0020633:35209-35228 None:intergenic 35.0%
GGATTAAACCACTATACCAA+TGG - tig0020633:35213-35232 None:intergenic 35.0%
GTTTCTTACTTTGAATTCCG+GGG + tig0020633:35237-35256 Msa1383990:intron 35.0%
! TTTTCTTGAGGAAACATGGT+AGG - tig0020633:35276-35295 None:intergenic 35.0%
GTTTCCTCAAGAAAATACAC+TGG + tig0020633:35281-35300 Msa1383990:intron 35.0%
! CTTTCCAGTGTATTTTCTTG+AGG - tig0020633:35288-35307 None:intergenic 35.0%
CTCAAGAAAATACACTGGAA+AGG + tig0020633:35286-35305 Msa1383990:intron 35.0%
AAGGCAAAAATGCGCTTAAA+AGG + tig0020633:35305-35324 Msa1383990:intron 35.0%
! ACATTTTGTAGAACAAGGGA+TGG - tig0020633:35575-35594 None:intergenic 35.0%
AAGATACAGTTCTGTTTCCA+TGG - tig0020633:35626-35645 None:intergenic 35.0%
GAAAACCAACAATCCGTAAA+AGG - tig0020633:35744-35763 None:intergenic 35.0%
TGCTGTCATCATAACTTACA+AGG + tig0020633:35887-35906 Msa1383990:CDS 35.0%
GCTGTCATCATAACTTACAA+GGG + tig0020633:35888-35907 Msa1383990:CDS 35.0%
CAACTGCAAATTATTCATGG+AGG - tig0020633:36054-36073 None:intergenic 35.0%
AATTTCTACTCAATGGTCAG+TGG + tig0020633:36103-36122 Msa1383990:CDS 35.0%
TCTGAATGATGAATTCAGCA+AGG - tig0020633:36227-36246 None:intergenic 35.0%
!!! ACTTTTTCAGACAAGCTGAA+CGG - tig0020633:36393-36412 None:intergenic 35.0%
! CTGAAAAAGTTTGCTTGTAG+TGG + tig0020633:36403-36422 Msa1383990:three_prime_UTR 35.0%
CGTTGATCCAAAACCAAAGA+TGG - tig0020633:31834-31853 None:intergenic 40.0%
! GTTGATTTCACAGATGTGCA+AGG + tig0020633:31939-31958 Msa1383990:intron 40.0%
CAACCGAATTCAGCGTATTA+GGG - tig0020633:31968-31987 None:intergenic 40.0%
ACAACCGAATTCAGCGTATT+AGG - tig0020633:31969-31988 None:intergenic 40.0%
TGATCATTTGCAGTAGTTGC+TGG + tig0020633:32152-32171 Msa1383990:intron 40.0%
!! TTTGCAGTAGTTGCTGGTTT+AGG + tig0020633:32158-32177 Msa1383990:intron 40.0%
!! TTGCAGTAGTTGCTGGTTTA+GGG + tig0020633:32159-32178 Msa1383990:intron 40.0%
GCTACACAGTTTCCACATAA+GGG - tig0020633:32249-32268 None:intergenic 40.0%
AGCTACACAGTTTCCACATA+AGG - tig0020633:32250-32269 None:intergenic 40.0%
! GAGTCTCCTGTTTCGATTTT+CGG + tig0020633:32454-32473 Msa1383990:intron 40.0%
TGACTGATCCCATAAAAAGG+AGG + tig0020633:32523-32542 Msa1383990:intron 40.0%
AAATAGGCCATTTCATGCTC+AGG + tig0020633:33019-33038 Msa1383990:intron 40.0%
! TTTGGTGATAGTTCAGATGG+TGG - tig0020633:33152-33171 None:intergenic 40.0%
! TTGTATGGTTGGACTAGGAA+CGG - tig0020633:33198-33217 None:intergenic 40.0%
ACAGGCGTATTACTAACGAT+TGG - tig0020633:33239-33258 None:intergenic 40.0%
AATCGTTAGTAATACGCCTG+TGG + tig0020633:33238-33257 Msa1383990:CDS 40.0%
TGGAACAGAAACAGAAGACA+AGG - tig0020633:33300-33319 None:intergenic 40.0%
!! TGTCTTCTGTTTCTGTTCCA+AGG + tig0020633:33300-33319 Msa1383990:CDS 40.0%
CAGTTGAATCCATCAGATGA+TGG - tig0020633:33329-33348 None:intergenic 40.0%
!! CATCATCTGATGGATTCAAC+TGG + tig0020633:33327-33346 Msa1383990:CDS 40.0%
GATTCAACTGGCGGAAATAT+GGG + tig0020633:33339-33358 Msa1383990:CDS 40.0%
CAAGTTAAGAGTCCTACTAC+AGG + tig0020633:33368-33387 Msa1383990:CDS 40.0%
GTGCTAAGAAGATTGAATGC+TGG + tig0020633:33429-33448 Msa1383990:CDS 40.0%
ATTGAATGCTGGGATCATTC+AGG + tig0020633:33440-33459 Msa1383990:CDS 40.0%
AATGGAACTAATCTTCCGTG+GGG - tig0020633:33510-33529 None:intergenic 40.0%
CTAATGGAACTAATCTTCCG+TGG - tig0020633:33512-33531 None:intergenic 40.0%
! CACGGAAGATTAGTTCCATT+AGG + tig0020633:33510-33529 Msa1383990:CDS 40.0%
CGCAAACTTACTTTCCCTAA+TGG - tig0020633:33528-33547 None:intergenic 40.0%
AAAACACTGTTCTCTGCAGT+CGG - tig0020633:33563-33582 None:intergenic 40.0%
GTGGATGGATCAGAATCTTT+CGG - tig0020633:33605-33624 None:intergenic 40.0%
!! TTCTTGAGCTTTGGAAGATG+TGG - tig0020633:33624-33643 None:intergenic 40.0%
AGGTGTTTCTTCTTGAGCTT+TGG - tig0020633:33633-33652 None:intergenic 40.0%
GCTGCATGTACAACAAACTT+GGG - tig0020633:33928-33947 None:intergenic 40.0%
TGCTGCATGTACAACAAACT+TGG - tig0020633:33929-33948 None:intergenic 40.0%
!! AAGTTTGTTGTACATGCAGC+AGG + tig0020633:33928-33947 Msa1383990:CDS 40.0%
GTATGGACAGAAAATGGTGA+AGG + tig0020633:33990-34009 Msa1383990:CDS 40.0%
GTGGATAAAGACCTTTACCT+GGG - tig0020633:34027-34046 None:intergenic 40.0%
TGTGGATAAAGACCTTTACC+TGG - tig0020633:34028-34047 None:intergenic 40.0%
CACCAGCTTGAATAAGATCT+TGG - tig0020633:34277-34296 None:intergenic 40.0%
AGGTCAGCTTATGAAACAAG+AGG + tig0020633:34819-34838 Msa1383990:intron 40.0%
AATTGTGAAACAAGAGGCCT+AGG + tig0020633:35021-35040 Msa1383990:intron 40.0%
TGTTAAACTGAGACCAGTAG+AGG + tig0020633:35061-35080 Msa1383990:intron 40.0%
GTTAAACTGAGACCAGTAGA+GGG + tig0020633:35062-35081 Msa1383990:intron 40.0%
TTAAACTGAGACCAGTAGAG+GGG + tig0020633:35063-35082 Msa1383990:intron 40.0%
AAAAAATTGACCCCCTCTAC+TGG - tig0020633:35077-35096 None:intergenic 40.0%
! ATAACGTGTAGCTTGTATCG+TGG + tig0020633:35127-35146 Msa1383990:intron 40.0%
! TAGCTTGTATCGTGGTATAG+TGG + tig0020633:35135-35154 Msa1383990:intron 40.0%
AAATACGGGGTTCGAATCTT+GGG + tig0020633:35183-35202 Msa1383990:intron 40.0%
!!! GTTGCTAAGCTAGTTTTGCA+AGG - tig0020633:35354-35373 None:intergenic 40.0%
ACATCCACATCCTTAATTCG+AGG + tig0020633:35451-35470 Msa1383990:intron 40.0%
GGATGGAAACAGACATGTTT+CGG - tig0020633:35558-35577 None:intergenic 40.0%
AGCAAATTATTCATGGAGGC+AGG - tig0020633:35990-36009 None:intergenic 40.0%
GCACAGCAAATTATTCATGG+AGG - tig0020633:35994-36013 None:intergenic 40.0%
TGGGCACAGCAAATTATTCA+TGG - tig0020633:35997-36016 None:intergenic 40.0%
TGCAAATTATTCATGGAGGC+AGG - tig0020633:36050-36069 None:intergenic 40.0%
ACACACTCACACATAAACCG+TGG + tig0020633:31532-31551 Msa1383990:five_prime_UTR 45.0%
GAAAACGAGATGCAATGACC+AGG + tig0020633:32570-32589 Msa1383990:intron 45.0%
GCCATTTCATGCTCAGGAAA+CGG + tig0020633:33025-33044 Msa1383990:intron 45.0%
ACCGTTTCCTGAGCATGAAA+TGG - tig0020633:33029-33048 None:intergenic 45.0%
TTTCATGCTCAGGAAACGGT+TGG + tig0020633:33029-33048 Msa1383990:intron 45.0%
TGCTAAAAGAGAAGCTGTCC+AGG + tig0020633:33076-33095 Msa1383990:CDS 45.0%
AGTCACTTGAAGCTGCTCTT+CGG - tig0020633:33117-33136 None:intergenic 45.0%
GGCGTATTACTAACGATTGG+AGG - tig0020633:33236-33255 None:intergenic 45.0%
!! CATCTGATGGATTCAACTGG+CGG + tig0020633:33330-33349 Msa1383990:CDS 45.0%
GGATTCAACTGGCGGAAATA+TGG + tig0020633:33338-33357 Msa1383990:CDS 45.0%
TAGCTTCGAGAACCTGTAGT+AGG - tig0020633:33383-33402 None:intergenic 45.0%
CAGGTTCTCGAAGCTATTAC+AGG + tig0020633:33387-33406 Msa1383990:CDS 45.0%
ATGGAACTAATCTTCCGTGG+GGG - tig0020633:33509-33528 None:intergenic 45.0%
!! GAATCTTTCGGAGCATTGAC+AGG - tig0020633:33593-33612 None:intergenic 45.0%
!! TGAGCTTTGGAAGATGTGGA+TGG - tig0020633:33620-33639 None:intergenic 45.0%
GGTTTCTTGTCAGAACTGCA+AGG - tig0020633:33653-33672 None:intergenic 45.0%
!! ACTTGCCTTCGTTTTGGATC+TGG - tig0020633:33740-33759 None:intergenic 45.0%
CAAGTCACCTTTCTCCTTTC+TGG - tig0020633:33869-33888 None:intergenic 45.0%
CAGAAAGGAGAAAGGTGACT+TGG + tig0020633:33867-33886 Msa1383990:intron 45.0%
!! TATCTGGTGATGGATACCGA+TGG + tig0020633:33962-33981 Msa1383990:CDS 45.0%
GCGCAAGTATGGACAGAAAA+TGG + tig0020633:33984-34003 Msa1383990:CDS 45.0%
AAGACCTTTACCTGGGATGT+GGG - tig0020633:34020-34039 None:intergenic 45.0%
AAAGACCTTTACCTGGGATG+TGG - tig0020633:34021-34040 None:intergenic 45.0%
GGCCAAGATCTTATTCAAGC+TGG + tig0020633:34272-34291 Msa1383990:intron 45.0%
AACAAGAGGCCTAGGTAAGT+TGG + tig0020633:35029-35048 Msa1383990:intron 45.0%
TAAACTGAGACCAGTAGAGG+GGG + tig0020633:35064-35083 Msa1383990:intron 45.0%
GAAATACGGGGTTCGAATCT+TGG + tig0020633:35182-35201 Msa1383990:intron 45.0%
AATTCCGGGGTTCCAATCTT+GGG + tig0020633:35250-35269 Msa1383990:intron 45.0%
AAACATGGTAGGCCCAAGAT+TGG - tig0020633:35265-35284 None:intergenic 45.0%
!!! AGCTAGTTTTGCAAGGAGGA+CGG - tig0020633:35347-35366 None:intergenic 45.0%
!!! GCTAAGCTAGTTTTGCAAGG+AGG - tig0020633:35351-35370 None:intergenic 45.0%
CATTCGCACATGCTGAACAT+CGG + tig0020633:35426-35445 Msa1383990:intron 45.0%
ACATCCTTAATTCGAGGCGT+CGG + tig0020633:35457-35476 Msa1383990:intron 45.0%
TGAGGTACAGATGGAAGTCA+CGG - tig0020633:35516-35535 None:intergenic 45.0%
!!! CGGATCTTTTGAGGTACAGA+TGG - tig0020633:35525-35544 None:intergenic 45.0%
!!! GGTCAGTAACGGATCTTTTG+AGG - tig0020633:35534-35553 None:intergenic 45.0%
CATGTTTCGGTGGTCAGTAA+CGG - tig0020633:35545-35564 None:intergenic 45.0%
TGGAAACAGACATGTTTCGG+TGG - tig0020633:35555-35574 None:intergenic 45.0%
TACTACAGATGCACTTCTGC+TGG + tig0020633:35819-35838 Msa1383990:CDS 45.0%
GTCTCAATGTGCTTTCGAAC+AGG - tig0020633:35849-35868 None:intergenic 45.0%
GACAGCATCTGAGTTGTCTA+CGG - tig0020633:35874-35893 None:intergenic 45.0%
! TTCTGATTTTGTGGCGAGTC+CGG - tig0020633:36083-36102 None:intergenic 45.0%
GCCGGTCTCTTGTAATTTCA+CGG + tig0020633:36278-36297 Msa1383990:three_prime_UTR 45.0%
GCCGTGAAATTACAAGAGAC+CGG - tig0020633:36282-36301 None:intergenic 45.0%
!! TGTTCTGGGAGAAGCTGAGT+GGG - tig0020633:31690-31709 None:intergenic 50.0%
!! TTGTTCTGGGAGAAGCTGAG+TGG - tig0020633:31691-31710 None:intergenic 50.0%
!! TTCACTTTTCTGCGACTCGG+TGG - tig0020633:31763-31782 None:intergenic 50.0%
!! GTAGTTGCTGGTTTAGGGCA+TGG + tig0020633:32164-32183 Msa1383990:intron 50.0%
! CCATCAGATGATGGTGTCCT+TGG - tig0020633:33320-33339 None:intergenic 50.0%
CCAAGGACACCATCATCTGA+TGG + tig0020633:33317-33336 Msa1383990:CDS 50.0%
ACGAGCCAGATCCAAAACGA+AGG + tig0020633:33732-33751 Msa1383990:CDS 50.0%
TGTACATGCAGCAGGAGATG+TGG + tig0020633:33936-33955 Msa1383990:CDS 50.0%
GTACATGCAGCAGGAGATGT+GGG + tig0020633:33937-33956 Msa1383990:CDS 50.0%
TACATGCAGCAGGAGATGTG+GGG + tig0020633:33938-33957 Msa1383990:CDS 50.0%
GATGTGGGGATATCTGGTGA+TGG + tig0020633:33952-33971 Msa1383990:CDS 50.0%
TCTGTCCATACTTGCGCCAT+CGG - tig0020633:33981-34000 None:intergenic 50.0%
GTAACCCACATCCCAGGTAA+AGG + tig0020633:34013-34032 Msa1383990:intron 50.0%
ATCCATGCTCCGCCACTTAT+TGG - tig0020633:34881-34900 None:intergenic 50.0%
TCGAATCTTGGGCCTACCAT+TGG + tig0020633:35194-35213 Msa1383990:intron 50.0%
TGGGCCTACCATTGGTATAG+TGG + tig0020633:35202-35221 Msa1383990:intron 50.0%
GAATTCCGGGGTTCCAATCT+TGG + tig0020633:35249-35268 Msa1383990:intron 50.0%
!!! CTAGTTTTGCAAGGAGGACG+GGG - tig0020633:35345-35364 None:intergenic 50.0%
!!! GCTAGTTTTGCAAGGAGGAC+GGG - tig0020633:35346-35365 None:intergenic 50.0%
GACGCCTCGAATTAAGGATG+TGG - tig0020633:35458-35477 None:intergenic 50.0%
GACACCGAAGGAGAACTAAC+CGG + tig0020633:36125-36144 Msa1383990:CDS 50.0%
ACACCGAAGGAGAACTAACC+GGG + tig0020633:36126-36145 Msa1383990:CDS 50.0%
! TTCCCCGGTTAGTTCTCCTT+CGG - tig0020633:36132-36151 None:intergenic 50.0%
CTATTGCTTTCTCACCCCCA+AGG - tig0020633:36163-36182 None:intergenic 50.0%
GATGCAATGACCAGGCTCTC+TGG + tig0020633:32578-32597 Msa1383990:intron 55.0%
CACTTTGTAGCCAGAGAGCC+TGG - tig0020633:32591-32610 None:intergenic 55.0%
TGTCCAGGAACCTTCAGCTC+AGG + tig0020633:33091-33110 Msa1383990:CDS 55.0%
AGCACAGTCATGATCCCCCA+CGG + tig0020633:33492-33511 Msa1383990:CDS 55.0%
!! TCTGCAGTCGGTTCGTTGGA+GGG - tig0020633:33551-33570 None:intergenic 55.0%
!! GTTCTCTGCAGTCGGTTCGT+TGG - tig0020633:33555-33574 None:intergenic 55.0%
! ACGCGGACTTGCCTTCGTTT+TGG - tig0020633:33746-33765 None:intergenic 55.0%
GCAGGAGATGTGGGGATATC+TGG + tig0020633:33946-33965 Msa1383990:CDS 55.0%
GGATACCGATGGCGCAAGTA+TGG + tig0020633:33973-33992 Msa1383990:CDS 55.0%
TGAAGGGTAACCCACATCCC+AGG + tig0020633:34007-34026 Msa1383990:CDS 55.0%
! GACCAATAAGTGGCGGAGCA+TGG + tig0020633:34876-34895 Msa1383990:intron 55.0%
TAGGCCCAAGATTGGAACCC+CGG - tig0020633:35257-35276 None:intergenic 55.0%
!! AGCACCGACGCCTCGAATTA+AGG - tig0020633:35464-35483 None:intergenic 55.0%
CCTGTGCCGAAGAAACGACA+CGG + tig0020633:35930-35949 Msa1383990:CDS 55.0%
!! CCACAAGAGGAGCACTTGGT+GGG - tig0020633:35956-35975 None:intergenic 55.0%
!! CCACAAGAGGAGCACTTGGT+GGG - tig0020633:35956-35975 None:intergenic 55.0%
!! TCAGCCACAAGAGGAGCACT+TGG - tig0020633:36020-36039 None:intergenic 55.0%
CAATGGTCAGTGGACACCGA+AGG + tig0020633:36113-36132 Msa1383990:CDS 55.0%
CACCGAAGGAGAACTAACCG+GGG + tig0020633:36127-36146 Msa1383990:CDS 55.0%
AGAACTAACCGGGGAAGCCA+AGG + tig0020633:36136-36155 Msa1383990:CDS 55.0%
TTTCTCACCCCCAAGGTCCT+TGG - tig0020633:36156-36175 None:intergenic 55.0%
GCTCGAACGCTTCTGAGCAT+AGG + tig0020633:36188-36207 Msa1383990:CDS 55.0%
GTCTCCGAAGCTCTCCCTGT+GGG + tig0020633:31663-31682 Msa1383990:CDS 60.0%
GAAGCTGAGTGGGTCCCACA+GGG - tig0020633:31680-31699 None:intergenic 60.0%
AGAAGCTGAGTGGGTCCCAC+AGG - tig0020633:31681-31700 None:intergenic 60.0%
!! TTCTGCGACTCGGTGGCTGA+CGG - tig0020633:31756-31775 None:intergenic 60.0%
TGCTCTTCGGCCTGAGCTGA+AGG - tig0020633:33104-33123 None:intergenic 60.0%
!! CTCTGCAGTCGGTTCGTTGG+AGG - tig0020633:33552-33571 None:intergenic 60.0%
TTGCAAGGAGGACGGGGACT+TGG - tig0020633:35339-35358 None:intergenic 60.0%
!! TTCGAGGCGTCGGTGCTACA+TGG + tig0020633:35467-35486 Msa1383990:intron 60.0%
!! CCGTGTCGTTTCTTCGGCAC+AGG - tig0020633:35933-35952 None:intergenic 60.0%
!! GGTGGGCCGTGTCGTTTCTT+CGG - tig0020633:35939-35958 None:intergenic 60.0%
CCCACCAAGTGCTCCTCTTG+TGG + tig0020633:35953-35972 Msa1383990:CDS 60.0%
!! GCCACAAGAGGAGCACTTGG+TGG - tig0020633:35957-35976 None:intergenic 60.0%
!! GCAGCCACAAGAGGAGCACT+TGG - tig0020633:35960-35979 None:intergenic 60.0%
CCCACCAAGTGCTCCTCTTG+TGG + tig0020633:35953-35972 Msa1383990:CDS 60.0%
!! GCCACAAGAGGAGCACTTGG+TGG - tig0020633:35957-35976 None:intergenic 60.0%
! GGTGCTGCATCAGCCACAAG+AGG - tig0020633:36029-36048 None:intergenic 60.0%
GGAGACGCGATGCTCAGCCA+TGG - tig0020633:31649-31668 None:intergenic 65.0%
CGTCTCCGAAGCTCTCCCTG+TGG + tig0020633:31662-31681 Msa1383990:CDS 65.0%
GGGTCCCACAGGGAGAGCTT+CGG - tig0020633:31670-31689 None:intergenic 65.0%
GCTGACGGTGATTCGCCGAC+TGG - tig0020633:31741-31760 None:intergenic 65.0%
CGGCCTGAGCTGAAGGTTCC+TGG - tig0020633:33097-33116 None:intergenic 65.0%
! GGTGCTGCAGCAGCCACAAG+AGG - tig0020633:35969-35988 None:intergenic 65.0%
ACCGGGGAAGCCAAGGACCT+TGG + tig0020633:36143-36162 Msa1383990:CDS 65.0%
CCCAAGGTCCTTGGCTTCCC+CGG - tig0020633:36147-36166 None:intergenic 65.0%
CCGGGGAAGCCAAGGACCTT+GGG + tig0020633:36144-36163 Msa1383990:CDS 65.0%
CGGGGAAGCCAAGGACCTTG+GGG + tig0020633:36145-36164 Msa1383990:CDS 65.0%
GGGGAAGCCAAGGACCTTGG+GGG + tig0020633:36146-36165 Msa1383990:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0020633 gene 31480 36464 31480 ID=Msa1383990;Name=Msa1383990
tig0020633 mRNA 31480 36464 31480 ID=Msa1383990-mRNA-1;Parent=Msa1383990;Name=Msa1383990-mRNA-1;_AED=0.05;_eAED=0.05;_QI=168|0.75|0.6|1|1|1|5|232|520
tig0020633 exon 31480 31861 31480 ID=Msa1383990-mRNA-1:exon:8872;Parent=Msa1383990-mRNA-1
tig0020633 exon 31952 32004 31952 ID=Msa1383990-mRNA-1:exon:8873;Parent=Msa1383990-mRNA-1
tig0020633 exon 33041 33763 33041 ID=Msa1383990-mRNA-1:exon:8874;Parent=Msa1383990-mRNA-1
tig0020633 exon 33874 34028 33874 ID=Msa1383990-mRNA-1:exon:8875;Parent=Msa1383990-mRNA-1
tig0020633 exon 35815 36464 35815 ID=Msa1383990-mRNA-1:exon:8876;Parent=Msa1383990-mRNA-1
tig0020633 five_prime_UTR 31480 31647 31480 ID=Msa1383990-mRNA-1:five_prime_utr;Parent=Msa1383990-mRNA-1
tig0020633 CDS 31648 31861 31648 ID=Msa1383990-mRNA-1:cds;Parent=Msa1383990-mRNA-1
tig0020633 CDS 31952 32004 31952 ID=Msa1383990-mRNA-1:cds;Parent=Msa1383990-mRNA-1
tig0020633 CDS 33041 33763 33041 ID=Msa1383990-mRNA-1:cds;Parent=Msa1383990-mRNA-1
tig0020633 CDS 33874 34028 33874 ID=Msa1383990-mRNA-1:cds;Parent=Msa1383990-mRNA-1
tig0020633 CDS 35815 36232 35815 ID=Msa1383990-mRNA-1:cds;Parent=Msa1383990-mRNA-1
tig0020633 three_prime_UTR 36233 36464 36233 ID=Msa1383990-mRNA-1:three_prime_utr;Parent=Msa1383990-mRNA-1
Gene Sequence

>Msa1383990

ATGGCTGAGCATCGCGTCTCCGAAGCTCTCCCTGTGGGACCCACTCAGCTTCTCCCAGAACAACAAAAAGCTCAAGAGATAAAAAAGGAACCAGTCGGCGAATCACCGTCAGCCACCGAGTCGCAGAAAAGTGAATTACCGAGTTCTAATGAAAATTCGAATTCAGAAACCCTAATTGCTTTTCCATCTTTGGTTTTGGATCAACGTAGTTTCGATGTGCAAGGAATCCCTAATACGCTGAATTCGGTTGTCAAATCCGAAATTAAGGAAACGGTTGGACCTCTTGAAAATGAAAAGGAAGTTGCTAAAAGAGAAGCTGTCCAGGAACCTTCAGCTCAGGCCGAAGAGCAGCTTCAAGTGACTGTGTCTTCAAATCCACCATCTGAACTATCACCAAATTCTGTTACAAAATCTTTATCATCCGTTCCTAGTCCAACCATACAAATACAGAATATGTCTCCTCCAATCGTTAGTAATACGCCTGTGGCAGAAGTAAACAAAAAAAGTACTTCTGGCGGTAGAGCCTTGTCTTCTGTTTCTGTTCCAAGGACACCATCATCTGATGGATTCAACTGGCGGAAATATGGGCAGAAGCAAGTTAAGAGTCCTACTACAGGTTCTCGAAGCTATTACAGGTGTACTCAATCAAACTGTTGTGCTAAGAAGATTGAATGCTGGGATCATTCAGGTCATGTGATAGAGACTGTTTATAAAAGTGAGCACAGTCATGATCCCCCACGGAAGATTAGTTCCATTAGGGAAAGTAAGTTTGCGCCCTCCAACGAACCGACTGCAGAGAACAGTGTTTTAGTGAAGCCTGTCAATGCTCCGAAAGATTCTGATCCATCCACATCTTCCAAAGCTCAAGAAGAAACACCTTGCAGTTCTGACAAGAAACCACAAAACTCATCTGATATCAATGGTAATGGTAAAATAGTTTTGAACGAGGAACATGTCGACGAGCCAGATCCAAAACGAAGGCAAGTCCGCGAGAAAGGTGACTTGGTTCACTCAGATTCTTCTGTAAAACCTGAAAAGAAACCCAAGTTTGTTGTACATGCAGCAGGAGATGTGGGGATATCTGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGTAACCCACATCCCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTTCGAAAGCACATTGAGACTGCCGTAGACAACTCAGATGCTGTCATCATAACTTACAAGGGTGTACATGATCATGACACTCCTGTGCCGAAGAAACGACACGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAATAATTTGCTGTGCCCACCAAGTGCTCCTCTTGTGGCTGATGCAGCACCTGCCTCCATGAATAATTTGCAGTTGAGTAAACCGGACTCGCCACAAAATCAGAAAATTTCTACTCAATGGTCAGTGGACACCGAAGGAGAACTAACCGGGGAAGCCAAGGACCTTGGGGGTGAGAAAGCAATAGAGTCAGCTCGAACGCTTCTGAGCATAGGTTTTGAAATCAAGCCTTGCTGA
Protein sequence

>Msa1383990

MAEHRVSEALPVGPTQLLPEQQKAQEIKKEPVGESPSATESQKSELPSSNENSNSETLIAFPSLVLDQRSFDVQGIPNTLNSVVKSEIKETVGPLENEKEVAKREAVQEPSAQAEEQLQVTVSSNPPSELSPNSVTKSLSSVPSPTIQIQNMSPPIVSNTPVAEVNKKSTSGGRALSSVSVPRTPSSDGFNWRKYGQKQVKSPTTGSRSYYRCTQSNCCAKKIECWDHSGHVIETVYKSEHSHDPPRKISSIRESKFAPSNEPTAENSVLVKPVNAPKDSDPSTSSKAQEETPCSSDKKPQNSSDINGNGKIVLNEEHVDEPDPKRRQVREKGDLVHSDSSVKPEKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDTPVPKKRHGPPSAPLVAAAAPASMNNLLCPPSAPLVADAAPASMNNLQLSKPDSPQNQKISTQWSVDTEGELTGEAKDLGGEKAIESARTLLSIGFEIKPC*