Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1371220 | KEH20990.1 | 87.753 | 841 | 19 | 4 | 1 | 794 | 1 | 804 | 0.0 | 1417 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1371220 | sp|F4KAF2|MORC4_ARATH | 52.363 | 783 | 307 | 16 | 26 | 790 | 25 | 759 | 0.0 | 742 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1371220 | A0A072U567 | 87.753 | 841 | 19 | 4 | 1 | 794 | 1 | 804 | 0.0 | 1417 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0389910 | Msa1371220 | 0.807613 | 4.639943e-50 | -8.615850e-47 |
Msa0571010 | Msa1371220 | 0.883927 | 2.962495e-71 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1371220 | MtrunA17_Chr8g0386101 | 87.753 | 841 | 19 | 4 | 1 | 794 | 1 | 804 | 0.0 | 1417 |
Msa1371220 | MtrunA17_Chr8g0372441 | 49.441 | 447 | 204 | 6 | 123 | 562 | 55 | 486 | 1.30e-150 | 454 |
Msa1371220 | MtrunA17_Chr3g0117371 | 50.691 | 434 | 195 | 10 | 123 | 552 | 97 | 515 | 1.75e-136 | 418 |
Msa1371220 | MtrunA17_Chr4g0058871 | 37.609 | 343 | 183 | 10 | 340 | 670 | 11 | 334 | 4.59e-52 | 185 |
Msa1371220 | MtrunA17_Chr4g0058881 | 58.696 | 138 | 53 | 3 | 122 | 258 | 90 | 224 | 5.87e-48 | 169 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1371220 | AT5G50780.2 | 52.746 | 783 | 308 | 15 | 26 | 790 | 25 | 763 | 0.0 | 753 |
Msa1371220 | AT5G50780.1 | 51.754 | 798 | 308 | 16 | 26 | 790 | 25 | 778 | 0.0 | 743 |
Msa1371220 | AT4G24970.1 | 68.945 | 512 | 135 | 6 | 70 | 572 | 86 | 582 | 0.0 | 726 |
Msa1371220 | AT5G50780.3 | 54.470 | 604 | 234 | 10 | 192 | 790 | 1 | 568 | 0.0 | 622 |
Msa1371220 | AT5G13130.1 | 59.539 | 477 | 184 | 5 | 120 | 594 | 73 | 542 | 0.0 | 601 |
Msa1371220 | AT5G13130.2 | 57.540 | 504 | 180 | 7 | 120 | 594 | 73 | 571 | 0.0 | 593 |
Msa1371220 | AT1G19100.1 | 49.015 | 457 | 212 | 9 | 122 | 573 | 86 | 526 | 9.12e-144 | 438 |
Msa1371220 | AT4G36290.1 | 49.195 | 435 | 208 | 6 | 122 | 554 | 58 | 481 | 3.44e-143 | 436 |
Msa1371220 | AT4G36280.1 | 45.709 | 501 | 237 | 12 | 122 | 602 | 50 | 535 | 8.25e-142 | 432 |
Msa1371220 | AT4G36270.1 | 43.681 | 364 | 153 | 9 | 212 | 554 | 1 | 333 | 9.96e-89 | 289 |
Find 196 sgRNAs with CRISPR-Local
Find 619 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAACATCATATTGATGTTTC+AGG | 0.166512 | tig0019188:+84073 | Msa1371220:CDS |
TTAAGGGTTGTAAGCAGTTT+TGG | 0.256234 | tig0019188:+79982 | Msa1371220:CDS |
GCTTCTGAGTGGTGCATCTA+TGG | 0.274397 | tig0019188:+88136 | Msa1371220:three_prime_UTR |
AGAATCAGTAGTTGAATTTC+AGG | 0.275685 | tig0019188:+86069 | Msa1371220:intron |
TACAATAATAATATTCTAAA+TGG | 0.286088 | tig0019188:-88237 | None:intergenic |
GAGAAGAAAGAGGAAGAAAT+AGG | 0.291504 | tig0019188:+86287 | Msa1371220:CDS |
AAGTGTTAGCTTTAGTCTTA+AGG | 0.295181 | tig0019188:+79965 | Msa1371220:CDS |
TCTTCTTTGTCTTCTTCTTT+CGG | 0.295574 | tig0019188:-79673 | None:intergenic |
AAAGATGTTGCGAACTTCTA+TGG | 0.298339 | tig0019188:+82970 | Msa1371220:CDS |
TGTCTTTGCCTGCGCCTGAA+TGG | 0.301722 | tig0019188:+79916 | Msa1371220:CDS |
TTGAACGATGTTTCTTAAAC+AGG | 0.334168 | tig0019188:+88335 | Msa1371220:three_prime_UTR |
GTCTTTGCCTGCGCCTGAAT+GGG | 0.337037 | tig0019188:+79917 | Msa1371220:CDS |
TACAAATGCAGAAAACTTAC+TGG | 0.338578 | tig0019188:+84754 | Msa1371220:CDS |
GGAGCTAACTGCGATAAAAT+TGG | 0.343638 | tig0019188:+84878 | Msa1371220:CDS |
TCTCGTGCTGGAAAGTCATT+TGG | 0.344108 | tig0019188:+85291 | Msa1371220:CDS |
ATGACAATATGAACAACCTT+TGG | 0.346672 | tig0019188:-85339 | None:intergenic |
GGGTAATTATATACAATCTC+TGG | 0.353194 | tig0019188:+83235 | Msa1371220:CDS |
AGTGTTAGCTTTAGTCTTAA+GGG | 0.357857 | tig0019188:+79966 | Msa1371220:CDS |
GATTGAGATGATTCTGGAAC+AGG | 0.365934 | tig0019188:-85036 | None:intergenic |
TTCAGCCATTCTGGAGGATC+TGG | 0.376798 | tig0019188:+84524 | Msa1371220:intron |
AGTTAAGAAGTGAGTGGAGT+TGG | 0.377911 | tig0019188:-83466 | None:intergenic |
AGGTCGGCCTCATCAGAAAA+TGG | 0.381078 | tig0019188:-83034 | None:intergenic |
CCTTGTTAACTGCATTCATT+TGG | 0.383595 | tig0019188:+88114 | Msa1371220:three_prime_UTR |
ATCTAAATCAACATCGGAAT+CGG | 0.397122 | tig0019188:-79748 | None:intergenic |
CAGTTGGTATGGATCATGTC+AGG | 0.399359 | tig0019188:+80585 | Msa1371220:intron |
GAAAGATAAGTGCAAATCTC+TGG | 0.403187 | tig0019188:+86337 | Msa1371220:CDS |
AGTGGTGGCCGTGGGGTCAT+AGG | 0.407424 | tig0019188:+84559 | Msa1371220:CDS |
AGAGATGATAAATCGGCTAT+TGG | 0.408814 | tig0019188:-86112 | None:intergenic |
CTTTCCCACGAAGAATAATT+CGG | 0.409523 | tig0019188:-83832 | None:intergenic |
TTCGATGTAGAAGCCCATTC+AGG | 0.412707 | tig0019188:-79930 | None:intergenic |
AACAAGTCCTTACTATCTAC+TGG | 0.417569 | tig0019188:-88306 | None:intergenic |
TTCTGGCCCAGTAGATAGTA+AGG | 0.417819 | tig0019188:+88299 | Msa1371220:three_prime_UTR |
AGCAAGATGGCAAATACAAT+TGG | 0.421977 | tig0019188:+81569 | Msa1371220:CDS |
CCTCAATCTGGAGTTGCTGA+TGG | 0.426807 | tig0019188:+83914 | Msa1371220:CDS |
TCCTGTTGTCAAGGAAAAGA+TGG | 0.427027 | tig0019188:+81738 | Msa1371220:CDS |
TAACCTTCTCAAGCAGCTCT+TGG | 0.427108 | tig0019188:-88039 | None:intergenic |
CCAGCAGGAAGTGGTGGCCG+TGG | 0.429566 | tig0019188:+84550 | Msa1371220:CDS |
TGTAAAATCTGCAGTTGGTA+TGG | 0.432769 | tig0019188:+80574 | Msa1371220:intron |
TGACAATATGAACAACCTTT+GGG | 0.441873 | tig0019188:-85338 | None:intergenic |
CTCTAAATACCTGGCTAAGA+AGG | 0.442608 | tig0019188:-83054 | None:intergenic |
ACAAGTCATAAGTGGGCTCT+TGG | 0.442932 | tig0019188:+80638 | Msa1371220:CDS |
CATTAGAATGTAGAAACTTC+GGG | 0.444015 | tig0019188:-80613 | None:intergenic |
CCACGGCCACCACTTCCTGC+TGG | 0.444540 | tig0019188:-84550 | None:intergenic |
GTCACGTACAGGCCTCAATC+TGG | 0.446312 | tig0019188:+83902 | Msa1371220:CDS |
TTCGACTATCACCCTTTGCT+TGG | 0.448771 | tig0019188:-85263 | None:intergenic |
TTCCGATGTTGATTTAGATT+CGG | 0.450695 | tig0019188:+79752 | Msa1371220:CDS |
AACATCATATTGATGTTTCA+GGG | 0.452962 | tig0019188:+84074 | Msa1371220:CDS |
AAAAGAGAATCACGAGTTGA+AGG | 0.455380 | tig0019188:+86147 | Msa1371220:CDS |
CTGTTCTAGAGATGATAAAT+CGG | 0.455855 | tig0019188:-86119 | None:intergenic |
CTGAGTTCGATGACCGAGTC+AGG | 0.456678 | tig0019188:-79720 | None:intergenic |
TCCAGGATGCTGCTAGTAGA+AGG | 0.456812 | tig0019188:+80959 | Msa1371220:CDS |
AAGCCTTGCTTGTCATGGGC+AGG | 0.460834 | tig0019188:-84690 | None:intergenic |
AACGGTGGTTCTGCTGGTAA+AGG | 0.465647 | tig0019188:+84929 | Msa1371220:CDS |
ATGATTGTTCTGATGAACTT+TGG | 0.471626 | tig0019188:-85191 | None:intergenic |
AAAACAAGTACCATGAGGCT+TGG | 0.472120 | tig0019188:+81696 | Msa1371220:CDS |
GATGATTCTGGAACAGGATC+GGG | 0.472289 | tig0019188:-85030 | None:intergenic |
GAATCAGTAGTTGAATTTCA+GGG | 0.472312 | tig0019188:+86070 | Msa1371220:intron |
AATACGTCAATGCATGTCAC+TGG | 0.472415 | tig0019188:+81532 | Msa1371220:CDS |
GCGTCGACGCCTGTCAATAA+TGG | 0.474195 | tig0019188:+79888 | Msa1371220:CDS |
AAGCAAAACGGTGGTTCTGC+TGG | 0.474900 | tig0019188:+84923 | Msa1371220:CDS |
AAGGAAGTCTTCAAGTCAAA+TGG | 0.478030 | tig0019188:+88072 | Msa1371220:CDS |
GTTAAGAAGTGAGTGGAGTT+GGG | 0.479133 | tig0019188:-83465 | None:intergenic |
TTCAGATAACGGCGGTGGGA+TGG | 0.482461 | tig0019188:+81499 | Msa1371220:intron |
GGAGGATGACCAAGGTCAGC+TGG | 0.482744 | tig0019188:+83257 | Msa1371220:CDS |
GAGTGGAGTTGGGATAATCT+TGG | 0.482817 | tig0019188:-83455 | None:intergenic |
GTTCAAAGCCTTGCTTGTCA+TGG | 0.485219 | tig0019188:-84695 | None:intergenic |
AGATATAGTGAACACAGAAA+TGG | 0.486960 | tig0019188:+85153 | Msa1371220:CDS |
AGTTGCTGATGGGCTTCTAA+AGG | 0.487290 | tig0019188:+83925 | Msa1371220:CDS |
ACCTTCTACTAGCAGCATCC+TGG | 0.488031 | tig0019188:-80960 | None:intergenic |
TGGTGCATCTATGGTGGCAT+TGG | 0.489972 | tig0019188:+88145 | Msa1371220:three_prime_UTR |
CTCGTGCTGGAAAGTCATTT+GGG | 0.490630 | tig0019188:+85292 | Msa1371220:CDS |
AGTGGAGTTGGGATAATCTT+GGG | 0.490787 | tig0019188:-83454 | None:intergenic |
GGTGCATCTATGGTGGCATT+GGG | 0.494625 | tig0019188:+88146 | Msa1371220:three_prime_UTR |
CAGAATCATCTCAATCGAAA+AGG | 0.495570 | tig0019188:+85043 | Msa1371220:CDS |
CTTCATGTGATAGATGGAAA+TGG | 0.496491 | tig0019188:+81669 | Msa1371220:intron |
TCTTGCTCCTTCTCCTTCTC+CGG | 0.497329 | tig0019188:+79866 | Msa1371220:CDS |
AAAATAAAACGAGGAAAGGA+AGG | 0.497875 | tig0019188:-79512 | None:intergenic |
ATGGGCAGGTTCAACAAAGT+TGG | 0.498194 | tig0019188:-84676 | None:intergenic |
TATTCTCCTCTTCACCCTCA+TGG | 0.498874 | tig0019188:+79608 | Msa1371220:exon |
CAATGATATGATGTATTCTC+AGG | 0.500460 | tig0019188:+83877 | Msa1371220:CDS |
AGGAAAAGTTCCGCTACAAA+TGG | 0.501812 | tig0019188:+85063 | Msa1371220:CDS |
GGTTTCCGAATTATTCTTCG+TGG | 0.503402 | tig0019188:+83827 | Msa1371220:CDS |
TTCAAAGCCTTGCTTGTCAT+GGG | 0.504131 | tig0019188:-84694 | None:intergenic |
CTCAATCTGGAGTTGCTGAT+GGG | 0.506171 | tig0019188:+83915 | Msa1371220:CDS |
GCATTAGAATGTAGAAACTT+CGG | 0.511635 | tig0019188:-80614 | None:intergenic |
ATTTGTATTTACAGGTGTGT+TGG | 0.512149 | tig0019188:+84650 | Msa1371220:intron |
GACAAAACACCATTATTGAC+AGG | 0.513798 | tig0019188:-79897 | None:intergenic |
TTTCAGGATATTCAAATACA+AGG | 0.515733 | tig0019188:+83399 | Msa1371220:intron |
CGAGTAAGAAAGATGGCTCC+AGG | 0.517005 | tig0019188:+80942 | Msa1371220:CDS |
AGATGATTCTGGAACAGGAT+CGG | 0.518006 | tig0019188:-85031 | None:intergenic |
AATGGGCTTCTACATCGAAC+CGG | 0.518683 | tig0019188:+79934 | Msa1371220:CDS |
CTTATTTCAGATAACGGCGG+TGG | 0.518759 | tig0019188:+81494 | Msa1371220:intron |
AGTAGATAGTAAGGACTTGT+TGG | 0.519176 | tig0019188:+88308 | Msa1371220:three_prime_UTR |
AAGTTCCTCACTAGAGATGT+AGG | 0.522200 | tig0019188:+88208 | Msa1371220:three_prime_UTR |
GTTGGACTTCAGGTTTGTAA+TGG | 0.522260 | tig0019188:+80890 | Msa1371220:intron |
CAGCAGGAAGTGGTGGCCGT+GGG | 0.523090 | tig0019188:+84551 | Msa1371220:CDS |
TTTGGACAATGCATTGGATG+AGG | 0.526190 | tig0019188:+80790 | Msa1371220:CDS |
CGTGCCTTCGAATCTTCAAC+CGG | 0.526751 | tig0019188:+80035 | Msa1371220:CDS |
GAAGATTCGAAGGCACGAGC+AGG | 0.530273 | tig0019188:-80029 | None:intergenic |
GTCAAGGAAAAGATGGGAAG+AGG | 0.531099 | tig0019188:+81745 | Msa1371220:CDS |
TTCTAGATTAGAGAAGAAAG+AGG | 0.532224 | tig0019188:+86277 | Msa1371220:intron |
TGCGAACTTCTATGGATGAC+TGG | 0.534365 | tig0019188:+82978 | Msa1371220:CDS |
ATCTGGAATCCAGCAGGAAG+TGG | 0.538539 | tig0019188:+84541 | Msa1371220:CDS |
TGAGGCCGACCTTCTTAGCC+AGG | 0.543176 | tig0019188:+83045 | Msa1371220:CDS |
GTAGAAGCCCATTCAGGCGC+AGG | 0.543375 | tig0019188:-79924 | None:intergenic |
TCGATGACCGAGTCAGGTAT+CGG | 0.544821 | tig0019188:-79714 | None:intergenic |
TCGTCAAAGAACCAAGCAAA+GGG | 0.546122 | tig0019188:+85252 | Msa1371220:CDS |
GGTAATTATATACAATCTCT+GGG | 0.546744 | tig0019188:+83236 | Msa1371220:CDS |
AATTGAGTTCCAGCTGACCT+TGG | 0.548168 | tig0019188:-83266 | None:intergenic |
AGTCGAAATATATCTCGTGC+TGG | 0.551911 | tig0019188:+85279 | Msa1371220:CDS |
CTTGTTCCATGAGGGTGAAG+AGG | 0.553811 | tig0019188:-79614 | None:intergenic |
CTAATGCCACAAGTCATAAG+TGG | 0.555360 | tig0019188:+80630 | Msa1371220:CDS |
ACCGAGTCAGGTATCGGAGC+GGG | 0.555423 | tig0019188:-79708 | None:intergenic |
AGTGCAAATCTCTGGAAACC+CGG | 0.555432 | tig0019188:+86345 | Msa1371220:CDS |
TCATAAGAATCGACTCATCA+AGG | 0.557946 | tig0019188:+84108 | Msa1371220:CDS |
TTCGGTTGTTGCTACCGCTA+CGG | 0.558116 | tig0019188:+79770 | Msa1371220:CDS |
CTTCTCAAGCAGCTCTTGGA+TGG | 0.558462 | tig0019188:-88035 | None:intergenic |
GTCGACGCCGGAGAAGGAGA+AGG | 0.558649 | tig0019188:-79873 | None:intergenic |
GTTTCCGAATTATTCTTCGT+GGG | 0.563425 | tig0019188:+83828 | Msa1371220:CDS |
AAGTCCTTCCAAGAAAAGAA+AGG | 0.563639 | tig0019188:+79797 | Msa1371220:CDS |
CCTGTTGTCAAGGAAAAGAT+GGG | 0.569016 | tig0019188:+81739 | Msa1371220:CDS |
TTAGAAAATAAAACGAGGAA+AGG | 0.569165 | tig0019188:-79516 | None:intergenic |
GGATTCCAGATCCTCCAGAA+TGG | 0.570173 | tig0019188:-84529 | None:intergenic |
TGGAGGATCTGGAATCCAGC+AGG | 0.570456 | tig0019188:+84535 | Msa1371220:CDS |
AGTCATAAGTGGGCTCTTGG+AGG | 0.570495 | tig0019188:+80641 | Msa1371220:CDS |
CCAAATGAATGCAGTTAACA+AGG | 0.571108 | tig0019188:-88114 | None:intergenic |
AGAAGGTTAGATCACTTGAA+AGG | 0.571506 | tig0019188:+88053 | Msa1371220:CDS |
ATGGTTGCTACTGTTACTAT+CGG | 0.572756 | tig0019188:+84034 | Msa1371220:CDS |
ACAGGCGTCGACGCCGGAGA+AGG | 0.574660 | tig0019188:-79879 | None:intergenic |
CATCCAAGAGCTGCTTGAGA+AGG | 0.576882 | tig0019188:+88036 | Msa1371220:CDS |
TACATCTGCTCCAAGCCTCA+TGG | 0.580775 | tig0019188:-81706 | None:intergenic |
TGTTACTATCGGATTTGTCA+AGG | 0.580977 | tig0019188:+84045 | Msa1371220:CDS |
ATTCTCAGGAGGTCACGTAC+AGG | 0.582301 | tig0019188:+83891 | Msa1371220:CDS |
TGGGCCAGAAAATTTAGTGT+TGG | 0.583905 | tig0019188:-88286 | None:intergenic |
CTCGTCAAAGAACCAAGCAA+AGG | 0.584131 | tig0019188:+85251 | Msa1371220:CDS |
ATCAGGCCTACACGGAGCAT+AGG | 0.585217 | tig0019188:+82504 | Msa1371220:intron |
AATCGAAATAGAAAGCAAAA+CGG | 0.586695 | tig0019188:+84911 | Msa1371220:CDS |
CCATCAGCAACTCCAGATTG+AGG | 0.586958 | tig0019188:-83914 | None:intergenic |
TGCTGGAAAGTCATTTGGGA+AGG | 0.588831 | tig0019188:+85296 | Msa1371220:CDS |
GACAGAAACTTGTTCCATGA+GGG | 0.591091 | tig0019188:-79622 | None:intergenic |
ATATAATTACCCGTGTACCT+TGG | 0.592587 | tig0019188:-83224 | None:intergenic |
TGGAAAGCCGGTGATTATGG+TGG | 0.594419 | tig0019188:+80002 | Msa1371220:CDS |
AGAATCACGAGTTGAAGGAG+AGG | 0.594654 | tig0019188:+86152 | Msa1371220:CDS |
AACTTATCGACATTCACTGA+GGG | 0.596733 | tig0019188:+83485 | Msa1371220:CDS |
AAAAGAAAGGTTAATGACAA+AGG | 0.596916 | tig0019188:+79810 | Msa1371220:CDS |
TCTGAGTGGTGCATCTATGG+TGG | 0.598619 | tig0019188:+88139 | Msa1371220:three_prime_UTR |
GGAGAAGGAGAAGGAGCAAG+AGG | 0.599429 | tig0019188:-79864 | None:intergenic |
GTGCAAATCTCTGGAAACCC+GGG | 0.600738 | tig0019188:+86346 | Msa1371220:CDS |
GGAAGACATTGTAGTGCCCA+TGG | 0.602512 | tig0019188:+82563 | Msa1371220:CDS |
TCGATAAGTTAAGAAGTGAG+TGG | 0.606480 | tig0019188:-83472 | None:intergenic |
AAGAGCCCACTTATGACTTG+TGG | 0.607772 | tig0019188:-80636 | None:intergenic |
ATACGTCAATGCATGTCACT+GGG | 0.610043 | tig0019188:+81533 | Msa1371220:CDS |
AGTTGGTATGGATCATGTCA+GGG | 0.610107 | tig0019188:+80586 | Msa1371220:intron |
ACAAGTCCTTACTATCTACT+GGG | 0.612199 | tig0019188:-88305 | None:intergenic |
TGGAATCCAGCAGGAAGTGG+TGG | 0.614206 | tig0019188:+84544 | Msa1371220:CDS |
GCATTCATTTGGCTTCTGAG+TGG | 0.616440 | tig0019188:+88125 | Msa1371220:three_prime_UTR |
AGGAGAACCACCATAATCAC+CGG | 0.616981 | tig0019188:-80009 | None:intergenic |
TTATTTCAGATAACGGCGGT+GGG | 0.618674 | tig0019188:+81495 | Msa1371220:intron |
ATGCTTGCGAGTAAGAAAGA+TGG | 0.618736 | tig0019188:+80935 | Msa1371220:CDS |
AAGTTCCGCTACAAATGGCA+AGG | 0.619802 | tig0019188:+85068 | Msa1371220:CDS |
AAATACCTGGCTAAGAAGGT+CGG | 0.620846 | tig0019188:-83050 | None:intergenic |
ATGCCCCACCTATGACCCCA+CGG | 0.621901 | tig0019188:-84567 | None:intergenic |
AACTTTGGTTCACTGATGAG+CGG | 0.622636 | tig0019188:-85176 | None:intergenic |
ATTGTGTTCTCCTGTTGTCA+AGG | 0.626229 | tig0019188:+81729 | Msa1371220:CDS |
GAACCTGCCCATGACAAGCA+AGG | 0.627707 | tig0019188:+84687 | Msa1371220:CDS |
ACCCGCTCCGATACCTGACT+CGG | 0.627883 | tig0019188:+79707 | Msa1371220:CDS |
CTTACCGGTTGAAGATTCGA+AGG | 0.629128 | tig0019188:-80039 | None:intergenic |
TGTTGCCTTGCCATTTGTAG+CGG | 0.630952 | tig0019188:-85073 | None:intergenic |
TAATGCCACAAGTCATAAGT+GGG | 0.632893 | tig0019188:+80631 | Msa1371220:CDS |
TTATTGACAGGCGTCGACGC+CGG | 0.632994 | tig0019188:-79885 | None:intergenic |
AACCGAATCTAAATCAACAT+CGG | 0.635484 | tig0019188:-79754 | None:intergenic |
TTATATCTGAGGATTCCTCA+AGG | 0.638211 | tig0019188:+83806 | Msa1371220:CDS |
TGATATGATGTATTCTCAGG+AGG | 0.641459 | tig0019188:+83880 | Msa1371220:CDS |
GGAAGGACTTTCCGCCGTAG+CGG | 0.642644 | tig0019188:-79784 | None:intergenic |
CATATCTACATTTACATACG+TGG | 0.646567 | tig0019188:-80915 | None:intergenic |
AGAAAGGTTAATGACAAAGG+TGG | 0.646834 | tig0019188:+79813 | Msa1371220:CDS |
AGCAGGAAGTGGTGGCCGTG+GGG | 0.647388 | tig0019188:+84552 | Msa1371220:CDS |
AGAATAATTCGGAAACCTTG+AGG | 0.651583 | tig0019188:-83821 | None:intergenic |
TACACAAGGATCTAACCCAA+AGG | 0.660630 | tig0019188:+85323 | Msa1371220:CDS |
CTCATCCTACATCTCTAGTG+AGG | 0.661512 | tig0019188:-88213 | None:intergenic |
GGTTGTTGCTACCGCTACGG+CGG | 0.665482 | tig0019188:+79773 | Msa1371220:CDS |
ATATTCCGAGAAAAGCAAGA+TGG | 0.668434 | tig0019188:+81556 | Msa1371220:CDS |
ATGTTGAAACAGTAGTTCAG+TGG | 0.675772 | tig0019188:+83008 | Msa1371220:CDS |
CGAAATAGAAAGCAAAACGG+TGG | 0.676994 | tig0019188:+84914 | Msa1371220:CDS |
AGCAAGCCTATGCTCCGTGT+AGG | 0.693402 | tig0019188:-82510 | None:intergenic |
AATCTCTGGGAGGATGACCA+AGG | 0.701386 | tig0019188:+83249 | Msa1371220:CDS |
TGACAGAAACTTGTTCCATG+AGG | 0.702930 | tig0019188:-79623 | None:intergenic |
TAACTTATCGACATTCACTG+AGG | 0.713108 | tig0019188:+83484 | Msa1371220:CDS |
ATTCTTATTTCAGATAACGG+CGG | 0.713205 | tig0019188:+81491 | Msa1371220:intron |
GCTTTAAAACAAGTACCATG+AGG | 0.717774 | tig0019188:+81691 | Msa1371220:CDS |
TGACGTTAGAAAATAAAACG+AGG | 0.722997 | tig0019188:-79521 | None:intergenic |
TTTGGGAAGGAGTCTACACA+AGG | 0.723742 | tig0019188:+85309 | Msa1371220:CDS |
AGTATTGCAAGCTTTAGACG+AGG | 0.724992 | tig0019188:+86313 | Msa1371220:CDS |
GACCGAGTCAGGTATCGGAG+CGG | 0.730390 | tig0019188:-79709 | None:intergenic |
AGAGGACTGAGAAATCCCGC+CGG | 0.733991 | tig0019188:-79846 | None:intergenic |
AATTATATACAATCTCTGGG+AGG | 0.747675 | tig0019188:+83239 | Msa1371220:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATATATTTTTTTTTTTTT+TGG | + | tig0019188:81958-81977 | Msa1371220:intron | 0.0% |
!! | TTTACTTAAAATTATGAAAA+TGG | - | tig0019188:80697-80716 | None:intergenic | 10.0% |
!!! | TATTTCGTAAAAATATATTT+TGG | - | tig0019188:83350-83369 | None:intergenic | 10.0% |
!! | AAAACATAAATTAAAAGAAT+TGG | - | tig0019188:86735-86754 | None:intergenic | 10.0% |
!! | TTAATATATTTGAAAAAAGA+GGG | - | tig0019188:87593-87612 | None:intergenic | 10.0% |
!! | TTTAATATATTTGAAAAAAG+AGG | - | tig0019188:87594-87613 | None:intergenic | 10.0% |
!! | TACAATAATAATATTCTAAA+TGG | - | tig0019188:88240-88259 | None:intergenic | 10.0% |
!!! | AAAATGTTTAGAACAATTTA+AGG | - | tig0019188:80323-80342 | None:intergenic | 15.0% |
!! | TATTAACTTATTTCAATCTA+TGG | + | tig0019188:80999-81018 | Msa1371220:intron | 15.0% |
!! | ATTAACTTATTTCAATCTAT+GGG | + | tig0019188:81000-81019 | Msa1371220:intron | 15.0% |
!! | AGATAACATTTAAATATCTT+GGG | - | tig0019188:82180-82199 | None:intergenic | 15.0% |
!! | ATTAAAAGCTTATAAACAAA+AGG | + | tig0019188:82663-82682 | Msa1371220:intron | 15.0% |
!! | TTAAAAGCTTATAAACAAAA+GGG | + | tig0019188:82664-82683 | Msa1371220:intron | 15.0% |
!! | AAAACAAACAAAAATGTATA+TGG | - | tig0019188:83377-83396 | None:intergenic | 15.0% |
!!! | TTTTTGTTTGTTTTTATTTC+AGG | + | tig0019188:83383-83402 | Msa1371220:intron | 15.0% |
!! | ATCACTTCAAATTAATTTAA+TGG | - | tig0019188:83966-83985 | None:intergenic | 15.0% |
!! | ATTATGCTTATTTAACATAA+TGG | + | tig0019188:84625-84644 | Msa1371220:intron | 15.0% |
!!! | TGTTTTTTTGTACTTTATTT+AGG | + | tig0019188:84855-84874 | Msa1371220:intron | 15.0% |
!!! | GTTTTTTTGTACTTTATTTA+GGG | + | tig0019188:84856-84875 | Msa1371220:intron | 15.0% |
!!! | TTTTTTTGTACTTTATTTAG+GGG | + | tig0019188:84857-84876 | Msa1371220:intron | 15.0% |
!!! | TTAATGTTTAAAATGACTTA+AGG | - | tig0019188:85616-85635 | None:intergenic | 15.0% |
!! | AGAGAAATTTATTCAAAAAT+TGG | + | tig0019188:86519-86538 | Msa1371220:intron | 15.0% |
!! | TAATATATTTGAAAAAAGAG+GGG | - | tig0019188:87592-87611 | None:intergenic | 15.0% |
!! | TAAAAAGAAATTTACATTGT+CGG | - | tig0019188:87637-87656 | None:intergenic | 15.0% |
!!! | ATAAAATAGTAGATTTTCAT+TGG | + | tig0019188:87898-87917 | Msa1371220:intron | 15.0% |
!!! | TAAGTTTTTTTTTTCCTTCT+AGG | + | tig0019188:80058-80077 | Msa1371220:intron | 20.0% |
!!! | AAGTTTTTTTTTTCCTTCTA+GGG | + | tig0019188:80059-80078 | Msa1371220:intron | 20.0% |
!!! | TTTACACATTACATTTTCTT+TGG | + | tig0019188:80143-80162 | Msa1371220:intron | 20.0% |
!!! | TTACACATTACATTTTCTTT+GGG | + | tig0019188:80144-80163 | Msa1371220:intron | 20.0% |
!! | AACACACAAAAAATTACAAA+AGG | - | tig0019188:80380-80399 | None:intergenic | 20.0% |
!!! | TTGTAATTTTTTGTGTGTTT+TGG | + | tig0019188:80381-80400 | Msa1371220:intron | 20.0% |
!!! | TGTAATTTTTTGTGTGTTTT+GGG | + | tig0019188:80382-80401 | Msa1371220:intron | 20.0% |
!!! | TCAAAAATTGGTTTTTTGTA+TGG | + | tig0019188:80477-80496 | Msa1371220:intron | 20.0% |
!!! | GAAATTTTTTAATGCAGAAA+CGG | - | tig0019188:81456-81475 | None:intergenic | 20.0% |
!!! | TTCATTCTTATTTCAGATAA+CGG | + | tig0019188:81488-81507 | Msa1371220:intron | 20.0% |
!!! | GTTAAGTATTTCATTTTAGA+CGG | + | tig0019188:81621-81640 | Msa1371220:intron | 20.0% |
!! | TTTGGATATTATTGAGTTTA+TGG | + | tig0019188:81976-81995 | Msa1371220:intron | 20.0% |
!!! | AAACTAACTTTACTTTTAAC+TGG | + | tig0019188:82048-82067 | Msa1371220:intron | 20.0% |
!! | CAGATAACATTTAAATATCT+TGG | - | tig0019188:82181-82200 | None:intergenic | 20.0% |
!!! | TGTTTTATAAAACTCATTTC+TGG | + | tig0019188:82640-82659 | Msa1371220:intron | 20.0% |
!! | TATAGAAACAATTATTGACA+TGG | - | tig0019188:82742-82761 | None:intergenic | 20.0% |
!! | AAGAAATGTCAAAACATAAA+AGG | - | tig0019188:83097-83116 | None:intergenic | 20.0% |
!!! | TCGTAAAAATATATTTTGGA+GGG | - | tig0019188:83346-83365 | None:intergenic | 20.0% |
!!! | TTCGTAAAAATATATTTTGG+AGG | - | tig0019188:83347-83366 | None:intergenic | 20.0% |
!!! | AATTCTCTATTTTCAACTTT+TGG | - | tig0019188:83608-83627 | None:intergenic | 20.0% |
!!! | AAACCACATAAATTTTAAAG+GGG | - | tig0019188:84210-84229 | None:intergenic | 20.0% |
!!! | CAAACCACATAAATTTTAAA+GGG | - | tig0019188:84211-84230 | None:intergenic | 20.0% |
!!! | TCAAACCACATAAATTTTAA+AGG | - | tig0019188:84212-84231 | None:intergenic | 20.0% |
!!! | AATTTTATTATTGTTCTTGC+TGG | + | tig0019188:84335-84354 | Msa1371220:intron | 20.0% |
!!! | CTTTTGATGTTTTAATTTTC+TGG | - | tig0019188:85498-85517 | None:intergenic | 20.0% |
!!! | TTTTAAACTATTTAATGTCC+AGG | + | tig0019188:85734-85753 | Msa1371220:intron | 20.0% |
!!! | TACTGTTTTTTTTTTCATTG+TGG | + | tig0019188:86446-86465 | Msa1371220:intron | 20.0% |
!!! | ACTGTTTTTTTTTTCATTGT+GGG | + | tig0019188:86447-86466 | Msa1371220:intron | 20.0% |
!! | ATAAAGTAATAAGTAGTAAG+GGG | - | tig0019188:86706-86725 | None:intergenic | 20.0% |
!! | GATAAAGTAATAAGTAGTAA+GGG | - | tig0019188:86707-86726 | None:intergenic | 20.0% |
!! | AGATAAAGTAATAAGTAGTA+AGG | - | tig0019188:86708-86727 | None:intergenic | 20.0% |
!! | ACAAAAATATCCTTCAATAA+TGG | - | tig0019188:86763-86782 | None:intergenic | 20.0% |
!!! | AATATGGAAATGACTTTTTA+TGG | - | tig0019188:87011-87030 | None:intergenic | 20.0% |
!!! | AATTTTGACAACAATTTAGA+TGG | + | tig0019188:87064-87083 | Msa1371220:intron | 20.0% |
!!! | ATTTTGACAACAATTTAGAT+GGG | + | tig0019188:87065-87084 | Msa1371220:intron | 20.0% |
!! | AAATTGTGTGATATGTAATA+TGG | + | tig0019188:87099-87118 | Msa1371220:intron | 20.0% |
!! | GAAAATATGAAAAAAGCTTT+GGG | - | tig0019188:87220-87239 | None:intergenic | 20.0% |
!! | TAATGTTAGATGAATTTATC+AGG | - | tig0019188:87367-87386 | None:intergenic | 20.0% |
!! | GAAATATGTTAAAATTAAGC+AGG | - | tig0019188:87403-87422 | None:intergenic | 20.0% |
!!! | CTACAAATTTTGAGTTTAAT+GGG | + | tig0019188:87791-87810 | Msa1371220:intron | 20.0% |
! | TTAGAAAATAAAACGAGGAA+AGG | - | tig0019188:79519-79538 | None:intergenic | 25.0% |
! | AAAAGAAAGGTTAATGACAA+AGG | + | tig0019188:79810-79829 | Msa1371220:CDS | 25.0% |
! | GAAGGAAAAAAAAAACTTAC+CGG | - | tig0019188:80057-80076 | None:intergenic | 25.0% |
!!! | TGCATGTTAGTGTTTATTTT+TGG | + | tig0019188:80234-80253 | Msa1371220:intron | 25.0% |
!!! | TTTTTGGAAGACTTTTCATA+AGG | + | tig0019188:80250-80269 | Msa1371220:intron | 25.0% |
!!! | TTTTGGAAGACTTTTCATAA+GGG | + | tig0019188:80251-80270 | Msa1371220:intron | 25.0% |
!! | TTCATAAGGGAAATTTTGTA+TGG | + | tig0019188:80264-80283 | Msa1371220:intron | 25.0% |
!! | AATTTTGTATGGATCTTTCA+TGG | + | tig0019188:80275-80294 | Msa1371220:intron | 25.0% |
!!! | GTAATTTTTTGTGTGTTTTG+GGG | + | tig0019188:80383-80402 | Msa1371220:intron | 25.0% |
!!! | TAATTTTTTGTGTGTTTTGG+GGG | + | tig0019188:80384-80403 | Msa1371220:intron | 25.0% |
! | CAAAATGATGAAGAAATAGA+GGG | - | tig0019188:82148-82167 | None:intergenic | 25.0% |
! | ACAAAATGATGAAGAAATAG+AGG | - | tig0019188:82149-82168 | None:intergenic | 25.0% |
! | TATTACATGAGCTCTTAAAA+AGG | - | tig0019188:82333-82352 | None:intergenic | 25.0% |
!!! | TATACATTTTTGAGGAATAC+AGG | + | tig0019188:82537-82556 | Msa1371220:CDS | 25.0% |
!!! | ATACATTTTTGAGGAATACA+GGG | + | tig0019188:82538-82557 | Msa1371220:CDS | 25.0% |
!! | AAACATATAACTTGATGACA+TGG | - | tig0019188:83147-83166 | None:intergenic | 25.0% |
! | GGTAATTATATACAATCTCT+GGG | + | tig0019188:83236-83255 | Msa1371220:CDS | 25.0% |
! | TTTCAGGATATTCAAATACA+AGG | + | tig0019188:83399-83418 | Msa1371220:intron | 25.0% |
! | AGATGAGAAAAACATAAAGA+TGG | + | tig0019188:83431-83450 | Msa1371220:CDS | 25.0% |
! | CCTATACTGAATATGAAATT+GGG | - | tig0019188:83679-83698 | None:intergenic | 25.0% |
! | AAACATCATATTGATGTTTC+AGG | + | tig0019188:84073-84092 | Msa1371220:CDS | 25.0% |
! | AACATCATATTGATGTTTCA+GGG | + | tig0019188:84074-84093 | Msa1371220:CDS | 25.0% |
! | GAGTTTATTATGATTAGCAA+AGG | + | tig0019188:84133-84152 | Msa1371220:intron | 25.0% |
!!! | AACCACATAAATTTTAAAGG+GGG | - | tig0019188:84209-84228 | None:intergenic | 25.0% |
! | TAATGGTCATTTGTATTTAC+AGG | + | tig0019188:84642-84661 | Msa1371220:intron | 25.0% |
!!! | TACATTAGTTTTATCAAGAC+TGG | + | tig0019188:84719-84738 | Msa1371220:CDS | 25.0% |
! | AATCGAAATAGAAAGCAAAA+CGG | + | tig0019188:84911-84930 | Msa1371220:CDS | 25.0% |
!!! | ATGTAACTTGTTTTTTGTAG+AGG | + | tig0019188:85002-85021 | Msa1371220:intron | 25.0% |
! | GTTAGGATATTTAAACACAT+AGG | + | tig0019188:85771-85790 | Msa1371220:intron | 25.0% |
!!! | GTTATGTTGGAAGATTTTTT+TGG | + | tig0019188:85832-85851 | Msa1371220:intron | 25.0% |
!!! | TTTTTTGGTAATATCCTATG+AGG | + | tig0019188:85847-85866 | Msa1371220:intron | 25.0% |
!! | AGATATCTCAAAATGACTTT+TGG | + | tig0019188:85939-85958 | Msa1371220:intron | 25.0% |
!! | AGAAACATTTAAAATGGAGA+AGG | - | tig0019188:86254-86273 | None:intergenic | 25.0% |
!! | TTCTCCATTTTAAATGTTTC+TGG | + | tig0019188:86253-86272 | Msa1371220:intron | 25.0% |
! | GAATCCAGAAACATTTAAAA+TGG | - | tig0019188:86260-86279 | None:intergenic | 25.0% |
! | AAAAGAAAGTGAAAAAAGGT+GGG | - | tig0019188:86425-86444 | None:intergenic | 25.0% |
! | GTACAAAAGAAAGTGAAAAA+AGG | - | tig0019188:86429-86448 | None:intergenic | 25.0% |
!! | TAGTTTAGCTTCTTCAAAAA+AGG | - | tig0019188:86592-86611 | None:intergenic | 25.0% |
! | AATATCCTTCAATAATGGTA+TGG | - | tig0019188:86758-86777 | None:intergenic | 25.0% |
! | CTAAATAACACAACTCAATA+TGG | - | tig0019188:87027-87046 | None:intergenic | 25.0% |
! | CAAAATTTGATGTCAATTGT+GGG | - | tig0019188:87051-87070 | None:intergenic | 25.0% |
! | TCAAAATTTGATGTCAATTG+TGG | - | tig0019188:87052-87071 | None:intergenic | 25.0% |
! | CGAAAATATGAAAAAAGCTT+TGG | - | tig0019188:87221-87240 | None:intergenic | 25.0% |
! | TTAAATCGAAACATGATTTG+AGG | + | tig0019188:87326-87345 | Msa1371220:intron | 25.0% |
! | ATTATGACAAATTTGATTGC+AGG | - | tig0019188:87665-87684 | None:intergenic | 25.0% |
! | TTTAAGAACTAACCTAAAAG+TGG | - | tig0019188:87689-87708 | None:intergenic | 25.0% |
!!! | GCTACAAATTTTGAGTTTAA+TGG | + | tig0019188:87790-87809 | Msa1371220:intron | 25.0% |
! | AATGAATATCACATGGAAAA+TGG | - | tig0019188:87846-87865 | None:intergenic | 25.0% |
! | ATTTGGAAATGAATATCACA+TGG | - | tig0019188:87853-87872 | None:intergenic | 25.0% |
!!! | CTCACTTTTGTAATAGTATT+TGG | - | tig0019188:87870-87889 | None:intergenic | 25.0% |
! | CAAATACTATTACAAAAGTG+AGG | + | tig0019188:87868-87887 | Msa1371220:intron | 25.0% |
!!! | TTTTAGTCTTTTTGTTCTCA+AGG | + | tig0019188:87982-88001 | Msa1371220:intron | 25.0% |
AAAATAAAACGAGGAAAGGA+AGG | - | tig0019188:79515-79534 | None:intergenic | 30.0% | |
TGACGTTAGAAAATAAAACG+AGG | - | tig0019188:79524-79543 | None:intergenic | 30.0% | |
TCTTCTTTGTCTTCTTCTTT+CGG | - | tig0019188:79676-79695 | None:intergenic | 30.0% | |
ATCTAAATCAACATCGGAAT+CGG | - | tig0019188:79751-79770 | None:intergenic | 30.0% | |
!! | TTCCGATGTTGATTTAGATT+CGG | + | tig0019188:79752-79771 | Msa1371220:CDS | 30.0% |
AACCGAATCTAAATCAACAT+CGG | - | tig0019188:79757-79776 | None:intergenic | 30.0% | |
! | TTAACCTTTCTTTTCTTGGA+AGG | - | tig0019188:79804-79823 | None:intergenic | 30.0% |
! | GTCATTAACCTTTCTTTTCT+TGG | - | tig0019188:79808-79827 | None:intergenic | 30.0% |
! | AGCTAACACTTTTATTCAAC+CGG | - | tig0019188:79956-79975 | None:intergenic | 30.0% |
!! | AAGTGTTAGCTTTAGTCTTA+AGG | + | tig0019188:79965-79984 | Msa1371220:CDS | 30.0% |
!! | AGTGTTAGCTTTAGTCTTAA+GGG | + | tig0019188:79966-79985 | Msa1371220:CDS | 30.0% |
AAACACTAACATGCATGATA+TGG | - | tig0019188:80229-80248 | None:intergenic | 30.0% | |
!!! | AATTTTTTGTGTGTTTTGGG+GGG | + | tig0019188:80385-80404 | Msa1371220:intron | 30.0% |
TTGTATGGCTTTCAAACATA+AGG | + | tig0019188:80492-80511 | Msa1371220:intron | 30.0% | |
TGTATGGCTTTCAAACATAA+GGG | + | tig0019188:80493-80512 | Msa1371220:intron | 30.0% | |
TTTCTTGTAAAATCTGCAGT+TGG | + | tig0019188:80569-80588 | Msa1371220:intron | 30.0% | |
CATTAGAATGTAGAAACTTC+GGG | - | tig0019188:80616-80635 | None:intergenic | 30.0% | |
GCATTAGAATGTAGAAACTT+CGG | - | tig0019188:80617-80636 | None:intergenic | 30.0% | |
ACAACAGTTACAAATATGCT+CGG | - | tig0019188:80671-80690 | None:intergenic | 30.0% | |
AGAAAAACAGCAAAGGTTAA+TGG | - | tig0019188:80753-80772 | None:intergenic | 30.0% | |
! | AATGCTTTATTGAAAAGACG+TGG | - | tig0019188:80829-80848 | None:intergenic | 30.0% |
CATATCTACATTTACATACG+TGG | - | tig0019188:80918-80937 | None:intergenic | 30.0% | |
TATGGGAACGAAAATGAAAA+AGG | + | tig0019188:81017-81036 | Msa1371220:intron | 30.0% | |
ATGGGAACGAAAATGAAAAA+GGG | + | tig0019188:81018-81037 | Msa1371220:intron | 30.0% | |
AACCGTATCTTTAATTGATG+TGG | + | tig0019188:81089-81108 | Msa1371220:intron | 30.0% | |
ACCGTATCTTTAATTGATGT+GGG | + | tig0019188:81090-81109 | Msa1371220:intron | 30.0% | |
!! | TCTTTAACAAGTCGTTTTCT+GGG | - | tig0019188:81196-81215 | None:intergenic | 30.0% |
TTAAAGACAACAATAAGCTC+TGG | + | tig0019188:81209-81228 | Msa1371220:intron | 30.0% | |
AAGCTGTGTTACATAAAGTT+CGG | - | tig0019188:81386-81405 | None:intergenic | 30.0% | |
! | AAGCACGAAACAATTTTGTA+AGG | - | tig0019188:81423-81442 | None:intergenic | 30.0% |
TAATGCAGAAACGGAAAATA+AGG | - | tig0019188:81447-81466 | None:intergenic | 30.0% | |
! | ATTCTTATTTCAGATAACGG+CGG | + | tig0019188:81491-81510 | Msa1371220:intron | 30.0% |
!! | ATGCATTGACGTATTTTATC+AGG | - | tig0019188:81527-81546 | None:intergenic | 30.0% |
!!! | TACTGATTTTTTCTTGCTCA+CGG | + | tig0019188:81646-81665 | Msa1371220:intron | 30.0% |
GGATATTATTGAGTTTATGG+AGG | + | tig0019188:81979-81998 | Msa1371220:intron | 30.0% | |
! | CTGAGAATTTTGTAAACACA+TGG | - | tig0019188:82007-82026 | None:intergenic | 30.0% |
CATGTGTTTACAAAATTCTC+AGG | + | tig0019188:82005-82024 | Msa1371220:intron | 30.0% | |
! | ATTCTCAGGTTTCTCAATTT+TGG | + | tig0019188:82019-82038 | Msa1371220:intron | 30.0% |
! | TAAAGCATTAGATTCAAGTG+GGG | - | tig0019188:82120-82139 | None:intergenic | 30.0% |
! | GTAAAGCATTAGATTCAAGT+GGG | - | tig0019188:82121-82140 | None:intergenic | 30.0% |
! | AGTAAAGCATTAGATTCAAG+TGG | - | tig0019188:82122-82141 | None:intergenic | 30.0% |
AGGAATGTAAGTTTAGCAAA+AGG | - | tig0019188:82233-82252 | None:intergenic | 30.0% | |
! | TTGATAATCTTCGCTATTCT+AGG | + | tig0019188:82443-82462 | Msa1371220:intron | 30.0% |
! | AAATTTTTATCAGGCCTACA+CGG | + | tig0019188:82496-82515 | Msa1371220:intron | 30.0% |
! | TGCTGTCTTATACATTTTTG+AGG | + | tig0019188:82529-82548 | Msa1371220:CDS | 30.0% |
AAGACAGAACAAATTACCAT+GGG | - | tig0019188:82582-82601 | None:intergenic | 30.0% | |
TAAGACAGAACAAATTACCA+TGG | - | tig0019188:82583-82602 | None:intergenic | 30.0% | |
GAAACAATTATTGACATGGT+GGG | - | tig0019188:82738-82757 | None:intergenic | 30.0% | |
AGAAACAATTATTGACATGG+TGG | - | tig0019188:82739-82758 | None:intergenic | 30.0% | |
GGTTGAACTAAAAATTGGAT+AGG | - | tig0019188:83194-83213 | None:intergenic | 30.0% | |
! | CAACAGGTTGAACTAAAAAT+TGG | - | tig0019188:83199-83218 | None:intergenic | 30.0% |
GGGTAATTATATACAATCTC+TGG | + | tig0019188:83235-83254 | Msa1371220:CDS | 30.0% | |
AATTATATACAATCTCTGGG+AGG | + | tig0019188:83239-83258 | Msa1371220:CDS | 30.0% | |
!! | AAATATATTTTGGAGGGACA+AGG | - | tig0019188:83340-83359 | None:intergenic | 30.0% |
CCCAATTTCATATTCAGTAT+AGG | + | tig0019188:83676-83695 | Msa1371220:intron | 30.0% | |
GCCTATACTGAATATGAAAT+TGG | - | tig0019188:83680-83699 | None:intergenic | 30.0% | |
! | ACGCTTCAATTTTATATCTG+AGG | + | tig0019188:83795-83814 | Msa1371220:CDS | 30.0% |
CAATGATATGATGTATTCTC+AGG | + | tig0019188:83877-83896 | Msa1371220:CDS | 30.0% | |
! | CATCAAATTTTTGTGACAGA+TGG | + | tig0019188:84015-84034 | Msa1371220:intron | 30.0% |
ATTATGATTAGCAAAGGATG+AGG | + | tig0019188:84139-84158 | Msa1371220:intron | 30.0% | |
! | ACACTATTATTTTCCCTTTC+AGG | + | tig0019188:84163-84182 | Msa1371220:intron | 30.0% |
! | CACTATTATTTTCCCTTTCA+GGG | + | tig0019188:84164-84183 | Msa1371220:intron | 30.0% |
!! | ACTTGTGTTCTAAAGTCAAA+TGG | - | tig0019188:84300-84319 | None:intergenic | 30.0% |
TATTAATCTTCTGTGTCTGT+TGG | + | tig0019188:84437-84456 | Msa1371220:intron | 30.0% | |
ATTAATCTTCTGTGTCTGTT+GGG | + | tig0019188:84438-84457 | Msa1371220:intron | 30.0% | |
! | TCTGTTCTGATATTTCTGTA+AGG | + | tig0019188:84462-84481 | Msa1371220:intron | 30.0% |
ATACAAGTTATGCTTACTTG+TGG | + | tig0019188:84490-84509 | Msa1371220:intron | 30.0% | |
! | TTAATGATTTTCAGCCATTC+TGG | + | tig0019188:84515-84534 | Msa1371220:intron | 30.0% |
!! | AGCATAATCGATTTGATAAG+AGG | - | tig0019188:84613-84632 | None:intergenic | 30.0% |
ATTTGTATTTACAGGTGTGT+TGG | + | tig0019188:84650-84669 | Msa1371220:intron | 30.0% | |
TACAAATGCAGAAAACTTAC+TGG | + | tig0019188:84754-84773 | Msa1371220:CDS | 30.0% | |
!! | GTGATTCTTGATTTGTCATT+GGG | + | tig0019188:84776-84795 | Msa1371220:intron | 30.0% |
AGATATAGTGAACACAGAAA+TGG | + | tig0019188:85153-85172 | Msa1371220:CDS | 30.0% | |
ATGATTGTTCTGATGAACTT+TGG | - | tig0019188:85194-85213 | None:intergenic | 30.0% | |
TGACAATATGAACAACCTTT+GGG | - | tig0019188:85341-85360 | None:intergenic | 30.0% | |
ATGACAATATGAACAACCTT+TGG | - | tig0019188:85342-85361 | None:intergenic | 30.0% | |
! | TCTATGCTTTGCAACTTTTA+AGG | + | tig0019188:85404-85423 | Msa1371220:CDS | 30.0% |
! | CTATGCTTTGCAACTTTTAA+GGG | + | tig0019188:85405-85424 | Msa1371220:CDS | 30.0% |
AAACATCAAAAGTAAAAGCG+AGG | + | tig0019188:85506-85525 | Msa1371220:intron | 30.0% | |
! | TTTTTAACATCCAAATCTGC+AGG | + | tig0019188:85532-85551 | Msa1371220:intron | 30.0% |
! | TTTTAACATCCAAATCTGCA+GGG | + | tig0019188:85533-85552 | Msa1371220:intron | 30.0% |
TAACAGCATTAGTTATAACC+TGG | - | tig0019188:85755-85774 | None:intergenic | 30.0% | |
AGGTTATAACTAATGCTGTT+AGG | + | tig0019188:85754-85773 | Msa1371220:intron | 30.0% | |
!! | GCATTTTAGTGTAATTGTAC+TGG | + | tig0019188:85807-85826 | Msa1371220:intron | 30.0% |
AATTGTACTGGATGTTATGT+TGG | + | tig0019188:85819-85838 | Msa1371220:intron | 30.0% | |
ATGCCTTGAATTACACATTA+TGG | - | tig0019188:85884-85903 | None:intergenic | 30.0% | |
AAAAAACTGCATTGTGACTA+TGG | + | tig0019188:85973-85992 | Msa1371220:intron | 30.0% | |
AGAATCAGTAGTTGAATTTC+AGG | + | tig0019188:86069-86088 | Msa1371220:intron | 30.0% | |
GAATCAGTAGTTGAATTTCA+GGG | + | tig0019188:86070-86089 | Msa1371220:intron | 30.0% | |
!! | CTGTTCTAGAGATGATAAAT+CGG | - | tig0019188:86122-86141 | None:intergenic | 30.0% |
ATAAACCAGTATATGCAGTT+AGG | - | tig0019188:86197-86216 | None:intergenic | 30.0% | |
TTCTAGATTAGAGAAGAAAG+AGG | + | tig0019188:86277-86296 | Msa1371220:intron | 30.0% | |
CAAAAGAAAGTGAAAAAAGG+TGG | - | tig0019188:86426-86445 | None:intergenic | 30.0% | |
!!! | TCAACTTTTGGAATAGGAAA+AGG | + | tig0019188:86473-86492 | Msa1371220:intron | 30.0% |
! | ATTTCTCTACGCATTTTGTT+TGG | - | tig0019188:86507-86526 | None:intergenic | 30.0% |
TTCAAAAAAGGTGGCAATAA+AGG | - | tig0019188:86620-86639 | None:intergenic | 30.0% | |
! | TTTAGCTTCTTCAAAAAAGG+TGG | - | tig0019188:86629-86648 | None:intergenic | 30.0% |
GCTCACTTTACAATATATCA+AGG | + | tig0019188:86652-86671 | Msa1371220:intron | 30.0% | |
! | GTTTTCCATACCATTATTGA+AGG | + | tig0019188:86750-86769 | Msa1371220:intron | 30.0% |
GGATGGAGTATATATAACAA+TGG | + | tig0019188:86870-86889 | Msa1371220:intron | 30.0% | |
!!! | TAGATGTGTTGTGTTTTGAT+TGG | - | tig0019188:86948-86967 | None:intergenic | 30.0% |
! | TGGAAATGACTTTTTATGGT+CGG | - | tig0019188:87007-87026 | None:intergenic | 30.0% |
TGATTTGAGGACATTGAATA+CGG | + | tig0019188:87339-87358 | Msa1371220:intron | 30.0% | |
! | CTAACTTTTGTTCAGAATCA+CGG | - | tig0019188:87450-87469 | None:intergenic | 30.0% |
AAAGTTAGATGACTTGAACA+AGG | + | tig0019188:87462-87481 | Msa1371220:intron | 30.0% | |
!!! | TTTGTCATAATGCCACTTTT+AGG | + | tig0019188:87674-87693 | Msa1371220:intron | 30.0% |
!!! | TGTGCTGGTTTAATTTTGTT+AGG | + | tig0019188:88185-88204 | Msa1371220:three_prime_UTR | 30.0% |
! | ACTACCAACACTAAATTTTC+TGG | + | tig0019188:88282-88301 | Msa1371220:three_prime_UTR | 30.0% |
TTGAACGATGTTTCTTAAAC+AGG | + | tig0019188:88335-88354 | Msa1371220:three_prime_UTR | 30.0% | |
!! | TCAGTTTCACTTTTCAAACG+TGG | + | tig0019188:79555-79574 | Msa1371220:five_prime_UTR | 35.0% |
AAGTCCTTCCAAGAAAAGAA+AGG | + | tig0019188:79797-79816 | Msa1371220:CDS | 35.0% | |
AGAAAGGTTAATGACAAAGG+TGG | + | tig0019188:79813-79832 | Msa1371220:CDS | 35.0% | |
GACAAAACACCATTATTGAC+AGG | - | tig0019188:79900-79919 | None:intergenic | 35.0% | |
! | TTAAGGGTTGTAAGCAGTTT+TGG | + | tig0019188:79982-80001 | Msa1371220:CDS | 35.0% |
ATGCATGATATGGATCTGTT+TGG | - | tig0019188:80219-80238 | None:intergenic | 35.0% | |
TCCAGAGTTTGGTCAAAAAT+TGG | + | tig0019188:80465-80484 | Msa1371220:intron | 35.0% | |
! | ACCAATTTTTGACCAAACTC+TGG | - | tig0019188:80469-80488 | None:intergenic | 35.0% |
GTATGGCTTTCAAACATAAG+GGG | + | tig0019188:80494-80513 | Msa1371220:intron | 35.0% | |
TATGGCTTTCAAACATAAGG+GGG | + | tig0019188:80495-80514 | Msa1371220:intron | 35.0% | |
! | TGTAAAATCTGCAGTTGGTA+TGG | + | tig0019188:80574-80593 | Msa1371220:intron | 35.0% |
TAATGCCACAAGTCATAAGT+GGG | + | tig0019188:80631-80650 | Msa1371220:CDS | 35.0% | |
! | TAATGGTGATGAGTCTCTAA+AGG | - | tig0019188:80736-80755 | None:intergenic | 35.0% |
! | TGAACTTTTGGACAATGCAT+TGG | + | tig0019188:80784-80803 | Msa1371220:CDS | 35.0% |
TCTCCTTTACTTACTTGAGT+TGG | + | tig0019188:80872-80891 | Msa1371220:intron | 35.0% | |
AGTCCAACTCAAGTAAGTAA+AGG | - | tig0019188:80878-80897 | None:intergenic | 35.0% | |
!! | TACGGTTTAAGTTAGTTCTG+TGG | - | tig0019188:81076-81095 | None:intergenic | 35.0% |
GCCCACATCAATTAAAGATA+CGG | - | tig0019188:81094-81113 | None:intergenic | 35.0% | |
! | ACGTGAAGTATCAAAGATCA+TGG | + | tig0019188:81170-81189 | Msa1371220:intron | 35.0% |
!! | GTCTTTAACAAGTCGTTTTC+TGG | - | tig0019188:81197-81216 | None:intergenic | 35.0% |
ATATTCCGAGAAAAGCAAGA+TGG | + | tig0019188:81556-81575 | Msa1371220:CDS | 35.0% | |
!! | ATTTGCCATCTTGCTTTTCT+CGG | - | tig0019188:81564-81583 | None:intergenic | 35.0% |
AGCAAGATGGCAAATACAAT+TGG | + | tig0019188:81569-81588 | Msa1371220:CDS | 35.0% | |
CTTCATGTGATAGATGGAAA+TGG | + | tig0019188:81669-81688 | Msa1371220:intron | 35.0% | |
!! | GCTTTAAAACAAGTACCATG+AGG | + | tig0019188:81691-81710 | Msa1371220:CDS | 35.0% |
!! | TCAGGTTTCTCAATTTTGGT+CGG | + | tig0019188:82023-82042 | Msa1371220:intron | 35.0% |
TGAGTAGAAGTAAGACTGTA+AGG | - | tig0019188:82253-82272 | None:intergenic | 35.0% | |
!! | TCTTAAAAAGGTGTTTGGTC+AGG | - | tig0019188:82321-82340 | None:intergenic | 35.0% |
!! | TGAGCTCTTAAAAAGGTGTT+TGG | - | tig0019188:82326-82345 | None:intergenic | 35.0% |
! | GTGACCTGGAAATTTTTATC+AGG | + | tig0019188:82487-82506 | Msa1371220:intron | 35.0% |
TAGGCCTGATAAAAATTTCC+AGG | - | tig0019188:82494-82513 | None:intergenic | 35.0% | |
!! | ATTTTTGAGGAATACAGGGA+AGG | + | tig0019188:82542-82561 | Msa1371220:CDS | 35.0% |
AAACAATGCAAGTGTTACAC+TGG | - | tig0019188:82608-82627 | None:intergenic | 35.0% | |
TTATAAACAAAAGGGCAACC+TGG | + | tig0019188:82672-82691 | Msa1371220:intron | 35.0% | |
CTTATGCTGAAATCAAAAGC+TGG | + | tig0019188:82919-82938 | Msa1371220:intron | 35.0% | |
AAAGATGTTGCGAACTTCTA+TGG | + | tig0019188:82970-82989 | Msa1371220:CDS | 35.0% | |
ATGTTGAAACAGTAGTTCAG+TGG | + | tig0019188:83008-83027 | Msa1371220:CDS | 35.0% | |
TTCTTAGCCAGGTATTTAGA+GGG | + | tig0019188:83056-83075 | Msa1371220:intron | 35.0% | |
CATGGTGACATTGGATATTA+AGG | - | tig0019188:83129-83148 | None:intergenic | 35.0% | |
TTCAACCTGTTGAAAAACCA+AGG | + | tig0019188:83207-83226 | Msa1371220:CDS | 35.0% | |
TGTTGAAAAACCAAGGTACA+CGG | + | tig0019188:83214-83233 | Msa1371220:CDS | 35.0% | |
ATATAATTACCCGTGTACCT+TGG | - | tig0019188:83227-83246 | None:intergenic | 35.0% | |
TCGATAAGTTAAGAAGTGAG+TGG | - | tig0019188:83475-83494 | None:intergenic | 35.0% | |
TAACTTATCGACATTCACTG+AGG | + | tig0019188:83484-83503 | Msa1371220:CDS | 35.0% | |
AACTTATCGACATTCACTGA+GGG | + | tig0019188:83485-83504 | Msa1371220:CDS | 35.0% | |
GGTTAATTTACACATACAGC+AGG | - | tig0019188:83587-83606 | None:intergenic | 35.0% | |
TTATATCTGAGGATTCCTCA+AGG | + | tig0019188:83806-83825 | Msa1371220:CDS | 35.0% | |
AGAATAATTCGGAAACCTTG+AGG | - | tig0019188:83824-83843 | None:intergenic | 35.0% | |
GTTTCCGAATTATTCTTCGT+GGG | + | tig0019188:83828-83847 | Msa1371220:CDS | 35.0% | |
CTTTCCCACGAAGAATAATT+CGG | - | tig0019188:83835-83854 | None:intergenic | 35.0% | |
TGATATGATGTATTCTCAGG+AGG | + | tig0019188:83880-83899 | Msa1371220:CDS | 35.0% | |
ATGGTTGCTACTGTTACTAT+CGG | + | tig0019188:84034-84053 | Msa1371220:CDS | 35.0% | |
TGTTACTATCGGATTTGTCA+AGG | + | tig0019188:84045-84064 | Msa1371220:CDS | 35.0% | |
! | TCATAAGAATCGACTCATCA+AGG | + | tig0019188:84108-84127 | Msa1371220:CDS | 35.0% |
!! | ATAAATTTTAAAGGGGGCAG+GGG | - | tig0019188:84203-84222 | None:intergenic | 35.0% |
!! | CATAAATTTTAAAGGGGGCA+GGG | - | tig0019188:84204-84223 | None:intergenic | 35.0% |
!! | ACATAAATTTTAAAGGGGGC+AGG | - | tig0019188:84205-84224 | None:intergenic | 35.0% |
!! | TGCCCCCTTTAAAATTTATG+TGG | + | tig0019188:84204-84223 | Msa1371220:intron | 35.0% |
! | GTTTGTCTCATGTGTTGTTA+AGG | + | tig0019188:84412-84431 | Msa1371220:intron | 35.0% |
! | GCATTTTCTCTGTTCTTTTG+AGG | + | tig0019188:84586-84605 | Msa1371220:intron | 35.0% |
! | TTTTATCAAGACTGGAGCAA+CGG | + | tig0019188:84727-84746 | Msa1371220:CDS | 35.0% |
!! | GGTGATTCTTGATTTGTCAT+TGG | + | tig0019188:84775-84794 | Msa1371220:intron | 35.0% |
CAACAACTCATAGTTTATGC+AGG | - | tig0019188:84824-84843 | None:intergenic | 35.0% | |
! | CTTTTCGATTGAGATGATTC+TGG | - | tig0019188:85045-85064 | None:intergenic | 35.0% |
CAGAATCATCTCAATCGAAA+AGG | + | tig0019188:85043-85062 | Msa1371220:CDS | 35.0% | |
ATAAACGCAGCACATTTACT+TGG | - | tig0019188:85453-85472 | None:intergenic | 35.0% | |
ACATTAAGCAATGAGAGTTG+AGG | + | tig0019188:85629-85648 | Msa1371220:intron | 35.0% | |
GAATTACACATTATGGCTGA+TGG | - | tig0019188:85877-85896 | None:intergenic | 35.0% | |
CAGCCATAATGTGTAATTCA+AGG | + | tig0019188:85878-85897 | Msa1371220:intron | 35.0% | |
AGAGATGATAAATCGGCTAT+TGG | - | tig0019188:86115-86134 | None:intergenic | 35.0% | |
! | AAAAGAGAATCACGAGTTGA+AGG | + | tig0019188:86147-86166 | Msa1371220:CDS | 35.0% |
AGAAACCTAACTGCATATAC+TGG | + | tig0019188:86189-86208 | Msa1371220:intron | 35.0% | |
GAGAAGAAAGAGGAAGAAAT+AGG | + | tig0019188:86287-86306 | Msa1371220:CDS | 35.0% | |
GAAAGATAAGTGCAAATCTC+TGG | + | tig0019188:86337-86356 | Msa1371220:CDS | 35.0% | |
AAAAAGGTGGCAATAAAGGT+GGG | - | tig0019188:86616-86635 | None:intergenic | 35.0% | |
AAAAAAGGTGGCAATAAAGG+TGG | - | tig0019188:86617-86636 | None:intergenic | 35.0% | |
! | TAAGTAGTAAGGGGCATAAT+AGG | - | tig0019188:86697-86716 | None:intergenic | 35.0% |
TGCTAAAGTGACGTATAGTT+TGG | + | tig0019188:86844-86863 | Msa1371220:intron | 35.0% | |
AAGTGACGTATAGTTTGGAA+CGG | + | tig0019188:86849-86868 | Msa1371220:intron | 35.0% | |
!! | TGGAGAAGGATTTTAATGGA+GGG | - | tig0019188:86918-86937 | None:intergenic | 35.0% |
!!! | GTTGTGTTTTGATTGGAGTA+GGG | - | tig0019188:86941-86960 | None:intergenic | 35.0% |
!!! | TGTTGTGTTTTGATTGGAGT+AGG | - | tig0019188:86942-86961 | None:intergenic | 35.0% |
! | ATGACTTTTTATGGTCGGTT+TGG | - | tig0019188:87002-87021 | None:intergenic | 35.0% |
TGACAACAATTTAGATGGGT+AGG | + | tig0019188:87069-87088 | Msa1371220:intron | 35.0% | |
!! | AAAAAAGCTTTGGGATCACA+TGG | - | tig0019188:87211-87230 | None:intergenic | 35.0% |
TAAGCATAAGATGGCGTAAA+TGG | - | tig0019188:87248-87267 | None:intergenic | 35.0% | |
TGCAAGTTGTGTCCAAATTA+TGG | + | tig0019188:87275-87294 | Msa1371220:intron | 35.0% | |
AGTTGTGTCCAAATTATGGT+TGG | + | tig0019188:87279-87298 | Msa1371220:intron | 35.0% | |
GTTGTGTCCAAATTATGGTT+GGG | + | tig0019188:87280-87299 | Msa1371220:intron | 35.0% | |
TTGTGTCCAAATTATGGTTG+GGG | + | tig0019188:87281-87300 | Msa1371220:intron | 35.0% | |
TATTCACCCCAACCATAATT+TGG | - | tig0019188:87290-87309 | None:intergenic | 35.0% | |
AAGTTTGAGAAAGAAGCTTC+AGG | + | tig0019188:87546-87565 | Msa1371220:intron | 35.0% | |
ATTGGATGTCTGTGTAAATC+TGG | + | tig0019188:87916-87935 | Msa1371220:intron | 35.0% | |
TTGTTCTCAAGGTTTGTCTT+TGG | + | tig0019188:87993-88012 | Msa1371220:intron | 35.0% | |
!!! | CAAGGTTTGTCTTTGGTTTT+AGG | + | tig0019188:88000-88019 | Msa1371220:intron | 35.0% |
AGAAGGTTAGATCACTTGAA+AGG | + | tig0019188:88053-88072 | Msa1371220:CDS | 35.0% | |
AAGGAAGTCTTCAAGTCAAA+TGG | + | tig0019188:88072-88091 | Msa1371220:CDS | 35.0% | |
CCAAATGAATGCAGTTAACA+AGG | - | tig0019188:88117-88136 | None:intergenic | 35.0% | |
CCTTGTTAACTGCATTCATT+TGG | + | tig0019188:88114-88133 | Msa1371220:three_prime_UTR | 35.0% | |
!!! | CATTGGGAGCCTAATTTTTT+TGG | + | tig0019188:88162-88181 | Msa1371220:three_prime_UTR | 35.0% |
ACCAGCACACCAAAAAAATT+AGG | - | tig0019188:88174-88193 | None:intergenic | 35.0% | |
ACAAGTCCTTACTATCTACT+GGG | - | tig0019188:88308-88327 | None:intergenic | 35.0% | |
AACAAGTCCTTACTATCTAC+TGG | - | tig0019188:88309-88328 | None:intergenic | 35.0% | |
AGTAGATAGTAAGGACTTGT+TGG | + | tig0019188:88308-88327 | Msa1371220:three_prime_UTR | 35.0% | |
! | GACAGAAACTTGTTCCATGA+GGG | - | tig0019188:79625-79644 | None:intergenic | 40.0% |
! | TGACAGAAACTTGTTCCATG+AGG | - | tig0019188:79626-79645 | None:intergenic | 40.0% |
!!! | CAAAGGTGGTGCTATTTTAC+CGG | + | tig0019188:79827-79846 | Msa1371220:CDS | 40.0% |
!!! | TGTAAGCAGTTTTGGAAAGC+CGG | + | tig0019188:79990-80009 | Msa1371220:CDS | 40.0% |
!! | TTTTGGAAAGCCGGTGATTA+TGG | + | tig0019188:79999-80018 | Msa1371220:CDS | 40.0% |
ACAACAGCAAAAACCCTAGA+AGG | - | tig0019188:80075-80094 | None:intergenic | 40.0% | |
! | AGTTGGTATGGATCATGTCA+GGG | + | tig0019188:80586-80605 | Msa1371220:intron | 40.0% |
CTAATGCCACAAGTCATAAG+TGG | + | tig0019188:80630-80649 | Msa1371220:CDS | 40.0% | |
AAGCTGCAGAAAAACAGCAA+AGG | - | tig0019188:80760-80779 | None:intergenic | 40.0% | |
! | TGCAGCTTTTGCTGAACTTT+TGG | + | tig0019188:80772-80791 | Msa1371220:intron | 40.0% |
TTTGGACAATGCATTGGATG+AGG | + | tig0019188:80790-80809 | Msa1371220:CDS | 40.0% | |
TTGAAAAGACGTGGAAAGCA+AGG | - | tig0019188:80820-80839 | None:intergenic | 40.0% | |
!! | ACTTACTTGAGTTGGACTTC+AGG | + | tig0019188:80880-80899 | Msa1371220:intron | 40.0% |
! | GTTGGACTTCAGGTTTGTAA+TGG | + | tig0019188:80890-80909 | Msa1371220:intron | 40.0% |
ATGCTTGCGAGTAAGAAAGA+TGG | + | tig0019188:80935-80954 | Msa1371220:CDS | 40.0% | |
!! | GACAACAATAAGCTCTGGAT+AGG | + | tig0019188:81214-81233 | Msa1371220:intron | 40.0% |
TACCATGATAAGAACCGATG+TGG | + | tig0019188:81238-81257 | Msa1371220:intron | 40.0% | |
! | TTATTTCAGATAACGGCGGT+GGG | + | tig0019188:81495-81514 | Msa1371220:intron | 40.0% |
AATACGTCAATGCATGTCAC+TGG | + | tig0019188:81532-81551 | Msa1371220:CDS | 40.0% | |
ATACGTCAATGCATGTCACT+GGG | + | tig0019188:81533-81552 | Msa1371220:CDS | 40.0% | |
AAAACAAGTACCATGAGGCT+TGG | + | tig0019188:81696-81715 | Msa1371220:CDS | 40.0% | |
ATTGTGTTCTCCTGTTGTCA+AGG | + | tig0019188:81729-81748 | Msa1371220:CDS | 40.0% | |
TCCTGTTGTCAAGGAAAAGA+TGG | + | tig0019188:81738-81757 | Msa1371220:CDS | 40.0% | |
CCTGTTGTCAAGGAAAAGAT+GGG | + | tig0019188:81739-81758 | Msa1371220:CDS | 40.0% | |
AGAGCACATCTCAAACTTGT+AGG | - | tig0019188:81807-81826 | None:intergenic | 40.0% | |
TTGAGATGTGCTCTGCATAT+AGG | + | tig0019188:81813-81832 | Msa1371220:intron | 40.0% | |
TGAGATGTGCTCTGCATATA+GGG | + | tig0019188:81814-81833 | Msa1371220:intron | 40.0% | |
TGGATAAAATGGAGGAGAAC+GGG | - | tig0019188:82097-82116 | None:intergenic | 40.0% | |
GTGGATAAAATGGAGGAGAA+CGG | - | tig0019188:82098-82117 | None:intergenic | 40.0% | |
TTCAAGTGGGGTGGATAAAA+TGG | - | tig0019188:82108-82127 | None:intergenic | 40.0% | |
GCATGCTTCTGTATCTAACT+AGG | + | tig0019188:82465-82484 | Msa1371220:intron | 40.0% | |
TCTGCTAGACATGACATTCA+TGG | + | tig0019188:82830-82849 | Msa1371220:intron | 40.0% | |
AGACATGACATTCATGGACT+AGG | + | tig0019188:82836-82855 | Msa1371220:intron | 40.0% | |
AAGCTGGACTACGAAAAAGA+TGG | + | tig0019188:82935-82954 | Msa1371220:intron | 40.0% | |
GACTACGAAAAAGATGGACA+GGG | + | tig0019188:82941-82960 | Msa1371220:CDS | 40.0% | |
AAATACCTGGCTAAGAAGGT+CGG | - | tig0019188:83053-83072 | None:intergenic | 40.0% | |
CTCTAAATACCTGGCTAAGA+AGG | - | tig0019188:83057-83076 | None:intergenic | 40.0% | |
CTTCTTAGCCAGGTATTTAG+AGG | + | tig0019188:83055-83074 | Msa1371220:intron | 40.0% | |
TCTTAGCCAGGTATTTAGAG+GGG | + | tig0019188:83057-83076 | Msa1371220:intron | 40.0% | |
! | ACTTGATGACATGGTGACAT+TGG | - | tig0019188:83138-83157 | None:intergenic | 40.0% |
!! | GTGTACCTTGGTTTTTCAAC+AGG | - | tig0019188:83215-83234 | None:intergenic | 40.0% |
GTTGAAAAACCAAGGTACAC+GGG | + | tig0019188:83215-83234 | Msa1371220:CDS | 40.0% | |
AGTGGAGTTGGGATAATCTT+GGG | - | tig0019188:83457-83476 | None:intergenic | 40.0% | |
GTTAAGAAGTGAGTGGAGTT+GGG | - | tig0019188:83468-83487 | None:intergenic | 40.0% | |
AGTTAAGAAGTGAGTGGAGT+TGG | - | tig0019188:83469-83488 | None:intergenic | 40.0% | |
TAATCTGATTCCCACATTCC+TGG | + | tig0019188:83561-83580 | Msa1371220:intron | 40.0% | |
ATTGAAGCGTAACTCTGCAT+TGG | - | tig0019188:83785-83804 | None:intergenic | 40.0% | |
GGTTTCCGAATTATTCTTCG+TGG | + | tig0019188:83827-83846 | Msa1371220:CDS | 40.0% | |
! | TCAGCATAGACACTCTGAAA+AGG | - | tig0019188:84263-84282 | None:intergenic | 40.0% |
! | ATGATTTTCAGCCATTCTGG+AGG | + | tig0019188:84518-84537 | Msa1371220:intron | 40.0% |
TTCAAAGCCTTGCTTGTCAT+GGG | - | tig0019188:84697-84716 | None:intergenic | 40.0% | |
GGAGCTAACTGCGATAAAAT+TGG | + | tig0019188:84878-84897 | Msa1371220:CDS | 40.0% | |
CGAAATAGAAAGCAAAACGG+TGG | + | tig0019188:84914-84933 | Msa1371220:CDS | 40.0% | |
!! | AGATGATTCTGGAACAGGAT+CGG | - | tig0019188:85034-85053 | None:intergenic | 40.0% |
!! | GATTGAGATGATTCTGGAAC+AGG | - | tig0019188:85039-85058 | None:intergenic | 40.0% |
AGGAAAAGTTCCGCTACAAA+TGG | + | tig0019188:85063-85082 | Msa1371220:CDS | 40.0% | |
! | AACTTTGGTTCACTGATGAG+CGG | - | tig0019188:85179-85198 | None:intergenic | 40.0% |
TCGTCAAAGAACCAAGCAAA+GGG | + | tig0019188:85252-85271 | Msa1371220:CDS | 40.0% | |
AGTCGAAATATATCTCGTGC+TGG | + | tig0019188:85279-85298 | Msa1371220:CDS | 40.0% | |
TACACAAGGATCTAACCCAA+AGG | + | tig0019188:85323-85342 | Msa1371220:CDS | 40.0% | |
!! | TGCTTTGCAACTTTTAAGGG+TGG | + | tig0019188:85408-85427 | Msa1371220:CDS | 40.0% |
!! | GCAACTTTTAAGGGTGGATT+TGG | + | tig0019188:85414-85433 | Msa1371220:CDS | 40.0% |
GCACTCTTCATTCATTCATC+TGG | - | tig0019188:85476-85495 | None:intergenic | 40.0% | |
!! | GGCTTAGGTCTTATTTCTGA+GGG | + | tig0019188:85554-85573 | Msa1371220:intron | 40.0% |
!! | GCTTAGGTCTTATTTCTGAG+GGG | + | tig0019188:85555-85574 | Msa1371220:intron | 40.0% |
!! | CTTAGGTCTTATTTCTGAGG+GGG | + | tig0019188:85556-85575 | Msa1371220:intron | 40.0% |
AATCAGATACCAGCTCATTG+TGG | + | tig0019188:85698-85717 | Msa1371220:intron | 40.0% | |
! | CTCAAGATACAGTGCCTTTT+AGG | - | tig0019188:86015-86034 | None:intergenic | 40.0% |
!! | AGTATTGCAAGCTTTAGACG+AGG | + | tig0019188:86313-86332 | Msa1371220:CDS | 40.0% |
AAAGGTCATTTGCTCATACC+CGG | - | tig0019188:86367-86386 | None:intergenic | 40.0% | |
GGCAGAATTGACAGCATAAA+AGG | - | tig0019188:86385-86404 | None:intergenic | 40.0% | |
AGTGAAAAAAGGTGGGTGAA+AGG | - | tig0019188:86418-86437 | None:intergenic | 40.0% | |
! | CATTGTGGGCAATCAACTTT+TGG | + | tig0019188:86461-86480 | Msa1371220:intron | 40.0% |
!!! | GGGCAATCAACTTTTGGAAT+AGG | + | tig0019188:86467-86486 | Msa1371220:intron | 40.0% |
!! | GGAGAAGGATTTTAATGGAG+GGG | - | tig0019188:86917-86936 | None:intergenic | 40.0% |
!! | GTGGAGAAGGATTTTAATGG+AGG | - | tig0019188:86919-86938 | None:intergenic | 40.0% |
! | AGGGTGGAGAAGGATTTTAA+TGG | - | tig0019188:86922-86941 | None:intergenic | 40.0% |
TTCACCCTAAAGCTAATGCT+AGG | + | tig0019188:87135-87154 | Msa1371220:intron | 40.0% | |
TCACCCTAAAGCTAATGCTA+GGG | + | tig0019188:87136-87155 | Msa1371220:intron | 40.0% | |
CAAACGACGTAAGCATAAGA+TGG | - | tig0019188:87257-87276 | None:intergenic | 40.0% | |
! | TTGATGTGTTCTCTGAAGAG+AGG | + | tig0019188:87500-87519 | Msa1371220:intron | 40.0% |
! | TGATGTGTTCTCTGAAGAGA+GGG | + | tig0019188:87501-87520 | Msa1371220:intron | 40.0% |
!!! | GCCTAATTTTTTTGGTGTGC+TGG | + | tig0019188:88170-88189 | Msa1371220:three_prime_UTR | 40.0% |
AAGTTCCTCACTAGAGATGT+AGG | + | tig0019188:88208-88227 | Msa1371220:three_prime_UTR | 40.0% | |
TGGGCCAGAAAATTTAGTGT+TGG | - | tig0019188:88289-88308 | None:intergenic | 40.0% | |
TATTCTCCTCTTCACCCTCA+TGG | + | tig0019188:79608-79627 | Msa1371220:exon | 45.0% | |
TTCGATGTAGAAGCCCATTC+AGG | - | tig0019188:79933-79952 | None:intergenic | 45.0% | |
! | AATGGGCTTCTACATCGAAC+CGG | + | tig0019188:79934-79953 | Msa1371220:CDS | 45.0% |
AGGAGAACCACCATAATCAC+CGG | - | tig0019188:80012-80031 | None:intergenic | 45.0% | |
! | CTTACCGGTTGAAGATTCGA+AGG | - | tig0019188:80042-80061 | None:intergenic | 45.0% |
TGACCAAACTCTGGATTACC+AGG | - | tig0019188:80460-80479 | None:intergenic | 45.0% | |
GCTTTCAAACATAAGGGGGA+TGG | + | tig0019188:80499-80518 | Msa1371220:intron | 45.0% | |
! | CAGTTGGTATGGATCATGTC+AGG | + | tig0019188:80585-80604 | Msa1371220:intron | 45.0% |
AAGAGCCCACTTATGACTTG+TGG | - | tig0019188:80639-80658 | None:intergenic | 45.0% | |
! | ACAAGTCATAAGTGGGCTCT+TGG | + | tig0019188:80638-80657 | Msa1371220:CDS | 45.0% |
! | ATGAGTCTCTAAAGGCTAGG+CGG | - | tig0019188:80728-80747 | None:intergenic | 45.0% |
! | GTGATGAGTCTCTAAAGGCT+AGG | - | tig0019188:80731-80750 | None:intergenic | 45.0% |
CTAACTTTCTCTCGCCACAT+CGG | - | tig0019188:81255-81274 | None:intergenic | 45.0% | |
! | CTTATTTCAGATAACGGCGG+TGG | + | tig0019188:81494-81513 | Msa1371220:intron | 45.0% |
TCACGGCTTCATGTGATAGA+TGG | + | tig0019188:81663-81682 | Msa1371220:intron | 45.0% | |
! | CCCATCTTTTCCTTGACAAC+AGG | - | tig0019188:81742-81761 | None:intergenic | 45.0% |
GTCAAGGAAAAGATGGGAAG+AGG | + | tig0019188:81745-81764 | Msa1371220:CDS | 45.0% | |
AAGTGGGGTGGATAAAATGG+AGG | - | tig0019188:82105-82124 | None:intergenic | 45.0% | |
AGCATTAGATTCAAGTGGGG+TGG | - | tig0019188:82117-82136 | None:intergenic | 45.0% | |
! | AAGGAGAAGCATGCCTAGTT+CGG | - | tig0019188:82214-82233 | None:intergenic | 45.0% |
ATCCTCAAGCACAGTCATTG+GGG | - | tig0019188:82382-82401 | None:intergenic | 45.0% | |
CATCCTCAAGCACAGTCATT+GGG | - | tig0019188:82383-82402 | None:intergenic | 45.0% | |
! | TGCTTGAGGATGGATTTGTC+TGG | + | tig0019188:82391-82410 | Msa1371220:intron | 45.0% |
CTGTATCTAACTAGGTGACC+TGG | + | tig0019188:82473-82492 | Msa1371220:intron | 45.0% | |
GGACTACGAAAAAGATGGAC+AGG | + | tig0019188:82940-82959 | Msa1371220:CDS | 45.0% | |
ACGAAAAAGATGGACAGGGA+TGG | + | tig0019188:82945-82964 | Msa1371220:CDS | 45.0% | |
TGCGAACTTCTATGGATGAC+TGG | + | tig0019188:82978-82997 | Msa1371220:CDS | 45.0% | |
! | GTGGTCACCATTTTCTGATG+AGG | + | tig0019188:83027-83046 | Msa1371220:CDS | 45.0% |
CTTAGCCAGGTATTTAGAGG+GGG | + | tig0019188:83058-83077 | Msa1371220:intron | 45.0% | |
TTAGCCAGGTATTTAGAGGG+GGG | + | tig0019188:83059-83078 | Msa1371220:intron | 45.0% | |
AATTGAGTTCCAGCTGACCT+TGG | - | tig0019188:83269-83288 | None:intergenic | 45.0% | |
!! | CATGTGTATCAGTTGGTGGA+CGG | - | tig0019188:83315-83334 | None:intergenic | 45.0% |
! | CAAGGAGCATGTGTATCAGT+TGG | - | tig0019188:83322-83341 | None:intergenic | 45.0% |
GAGTGGAGTTGGGATAATCT+TGG | - | tig0019188:83458-83477 | None:intergenic | 45.0% | |
ATTTACACATACAGCAGGCC+AGG | - | tig0019188:83582-83601 | None:intergenic | 45.0% | |
! | CTCAATCTGGAGTTGCTGAT+GGG | + | tig0019188:83915-83934 | Msa1371220:CDS | 45.0% |
!! | AGTTGCTGATGGGCTTCTAA+AGG | + | tig0019188:83925-83944 | Msa1371220:CDS | 45.0% |
AGGGACGTAAAACCCTGAAA+GGG | - | tig0019188:84179-84198 | None:intergenic | 45.0% | |
ATGGGCAGGTTCAACAAAGT+TGG | - | tig0019188:84679-84698 | None:intergenic | 45.0% | |
GTTCAAAGCCTTGCTTGTCA+TGG | - | tig0019188:84698-84717 | None:intergenic | 45.0% | |
GTTCTGCTGGTAAAGGTTTG+AGG | + | tig0019188:84936-84955 | Msa1371220:intron | 45.0% | |
!! | GATGATTCTGGAACAGGATC+GGG | - | tig0019188:85033-85052 | None:intergenic | 45.0% |
AAGTTCCGCTACAAATGGCA+AGG | + | tig0019188:85068-85087 | Msa1371220:CDS | 45.0% | |
! | TGTTGCCTTGCCATTTGTAG+CGG | - | tig0019188:85076-85095 | None:intergenic | 45.0% |
CTCGTCAAAGAACCAAGCAA+AGG | + | tig0019188:85251-85270 | Msa1371220:CDS | 45.0% | |
TTCGACTATCACCCTTTGCT+TGG | - | tig0019188:85266-85285 | None:intergenic | 45.0% | |
TCTCGTGCTGGAAAGTCATT+TGG | + | tig0019188:85291-85310 | Msa1371220:CDS | 45.0% | |
CTCGTGCTGGAAAGTCATTT+GGG | + | tig0019188:85292-85311 | Msa1371220:CDS | 45.0% | |
TGCTGGAAAGTCATTTGGGA+AGG | + | tig0019188:85296-85315 | Msa1371220:CDS | 45.0% | |
TTTGGGAAGGAGTCTACACA+AGG | + | tig0019188:85309-85328 | Msa1371220:CDS | 45.0% | |
!! | GGGCTTAGGTCTTATTTCTG+AGG | + | tig0019188:85553-85572 | Msa1371220:intron | 45.0% |
GTGGGTATAACATGGGTTTC+AGG | + | tig0019188:85578-85597 | Msa1371220:intron | 45.0% | |
!! | TGGGTTTCAGGTTAAAGCAG+TGG | + | tig0019188:85590-85609 | Msa1371220:intron | 45.0% |
AATCGCATACCACAATGAGC+TGG | - | tig0019188:85710-85729 | None:intergenic | 45.0% | |
TGGCTGATGGTTTACCTCAT+AGG | - | tig0019188:85864-85883 | None:intergenic | 45.0% | |
CATTGTGACTATGGCCAAGA+TGG | + | tig0019188:85982-86001 | Msa1371220:intron | 45.0% | |
! | TTTTAGGCTCCTAGCCATCT+TGG | - | tig0019188:85999-86018 | None:intergenic | 45.0% |
AAGATGGCTAGGAGCCTAAA+AGG | + | tig0019188:85998-86017 | Msa1371220:intron | 45.0% | |
! | AGAATCACGAGTTGAAGGAG+AGG | + | tig0019188:86152-86171 | Msa1371220:CDS | 45.0% |
! | AGTGCAAATCTCTGGAAACC+CGG | + | tig0019188:86345-86364 | Msa1371220:CDS | 45.0% |
AAGGTCATTTGCTCATACCC+GGG | - | tig0019188:86366-86385 | None:intergenic | 45.0% | |
TGGGTGAAAGGCTGAGATTA+AGG | - | tig0019188:86406-86425 | None:intergenic | 45.0% | |
TGGAATAGGAAAAGGCGAGA+TGG | + | tig0019188:86481-86500 | Msa1371220:intron | 45.0% | |
! | GACGTATAGTTTGGAACGGA+TGG | + | tig0019188:86853-86872 | Msa1371220:intron | 45.0% |
!!! | GTGTTTTGATTGGAGTAGGG+TGG | - | tig0019188:86938-86957 | None:intergenic | 45.0% |
!! | TTATGGTCGGTTTGGTTCAG+AGG | - | tig0019188:86994-87013 | None:intergenic | 45.0% |
TAACCTTCTCAAGCAGCTCT+TGG | - | tig0019188:88042-88061 | None:intergenic | 45.0% | |
! | GCATTCATTTGGCTTCTGAG+TGG | + | tig0019188:88125-88144 | Msa1371220:three_prime_UTR | 45.0% |
CTCATCCTACATCTCTAGTG+AGG | - | tig0019188:88216-88235 | None:intergenic | 45.0% | |
TTCTGGCCCAGTAGATAGTA+AGG | + | tig0019188:88299-88318 | Msa1371220:three_prime_UTR | 45.0% | |
!!! | AATAAATCATTTTTAATTTA+AGG | - | tig0019188:86554-86573 | None:intergenic | 5.0% |
CTTGTTCCATGAGGGTGAAG+AGG | - | tig0019188:79617-79636 | None:intergenic | 50.0% | |
TCGATGACCGAGTCAGGTAT+CGG | - | tig0019188:79717-79736 | None:intergenic | 50.0% | |
TTCGGTTGTTGCTACCGCTA+CGG | + | tig0019188:79770-79789 | Msa1371220:CDS | 50.0% | |
!!! | AGGTGGTGCTATTTTACCGG+CGG | + | tig0019188:79830-79849 | Msa1371220:CDS | 50.0% |
TCTTGCTCCTTCTCCTTCTC+CGG | + | tig0019188:79866-79885 | Msa1371220:CDS | 50.0% | |
TGGAAAGCCGGTGATTATGG+TGG | + | tig0019188:80002-80021 | Msa1371220:CDS | 50.0% | |
CGTGCCTTCGAATCTTCAAC+CGG | + | tig0019188:80035-80054 | Msa1371220:CDS | 50.0% | |
TCGTCGCAATCTCAAGAGCA+TGG | - | tig0019188:80539-80558 | None:intergenic | 50.0% | |
! | AGTCATAAGTGGGCTCTTGG+AGG | + | tig0019188:80641-80660 | Msa1371220:CDS | 50.0% |
CGAGTAAGAAAGATGGCTCC+AGG | + | tig0019188:80942-80961 | Msa1371220:CDS | 50.0% | |
TCCAGGATGCTGCTAGTAGA+AGG | + | tig0019188:80959-80978 | Msa1371220:CDS | 50.0% | |
ACCTTCTACTAGCAGCATCC+TGG | - | tig0019188:80963-80982 | None:intergenic | 50.0% | |
ATGTTCAGTCGATGCGTGAG+GGG | - | tig0019188:81118-81137 | None:intergenic | 50.0% | |
GATGTTCAGTCGATGCGTGA+GGG | - | tig0019188:81119-81138 | None:intergenic | 50.0% | |
AGATGTTCAGTCGATGCGTG+AGG | - | tig0019188:81120-81139 | None:intergenic | 50.0% | |
!! | CGCCACATCGGTTCTTATCA+TGG | - | tig0019188:81243-81262 | None:intergenic | 50.0% |
TACATCTGCTCCAAGCCTCA+TGG | - | tig0019188:81709-81728 | None:intergenic | 50.0% | |
CTGACTTTCACCTCCGAACT+AGG | + | tig0019188:82198-82217 | Msa1371220:intron | 50.0% | |
!! | TGGGGGCTTTGGGGTTTATT+TGG | - | tig0019188:82364-82383 | None:intergenic | 50.0% |
TCCTCAAGCACAGTCATTGG+GGG | - | tig0019188:82381-82400 | None:intergenic | 50.0% | |
CCATCCTCAAGCACAGTCAT+TGG | - | tig0019188:82384-82403 | None:intergenic | 50.0% | |
CCAATGACTGTGCTTGAGGA+TGG | + | tig0019188:82381-82400 | Msa1371220:intron | 50.0% | |
GGAAGACATTGTAGTGCCCA+TGG | + | tig0019188:82563-82582 | Msa1371220:CDS | 50.0% | |
AGGTCGGCCTCATCAGAAAA+TGG | - | tig0019188:83037-83056 | None:intergenic | 50.0% | |
TAGCCAGGTATTTAGAGGGG+GGG | + | tig0019188:83060-83079 | Msa1371220:intron | 50.0% | |
! | AATCTCTGGGAGGATGACCA+AGG | + | tig0019188:83249-83268 | Msa1371220:CDS | 50.0% |
! | TTGGTGGACGGACATACATG+TGG | - | tig0019188:83303-83322 | None:intergenic | 50.0% |
GGAGCATGTGTATCAGTTGG+TGG | - | tig0019188:83319-83338 | None:intergenic | 50.0% | |
ATACAGCAGGCCAGGAATGT+GGG | - | tig0019188:83574-83593 | None:intergenic | 50.0% | |
ATTCTCAGGAGGTCACGTAC+AGG | + | tig0019188:83891-83910 | Msa1371220:CDS | 50.0% | |
CCATCAGCAACTCCAGATTG+AGG | - | tig0019188:83917-83936 | None:intergenic | 50.0% | |
! | CCTCAATCTGGAGTTGCTGA+TGG | + | tig0019188:83914-83933 | Msa1371220:CDS | 50.0% |
CAGGGACGTAAAACCCTGAA+AGG | - | tig0019188:84180-84199 | None:intergenic | 50.0% | |
! | TTCAGCCATTCTGGAGGATC+TGG | + | tig0019188:84524-84543 | Msa1371220:intron | 50.0% |
GGATTCCAGATCCTCCAGAA+TGG | - | tig0019188:84532-84551 | None:intergenic | 50.0% | |
! | ATCTGGAATCCAGCAGGAAG+TGG | + | tig0019188:84541-84560 | Msa1371220:CDS | 50.0% |
! | AAGCAAAACGGTGGTTCTGC+TGG | + | tig0019188:84923-84942 | Msa1371220:CDS | 50.0% |
! | AACGGTGGTTCTGCTGGTAA+AGG | + | tig0019188:84929-84948 | Msa1371220:CDS | 50.0% |
CATCCAAATCTGCAGGGCTT+AGG | + | tig0019188:85539-85558 | Msa1371220:intron | 50.0% | |
AGACCTAAGCCCTGCAGATT+TGG | - | tig0019188:85545-85564 | None:intergenic | 50.0% | |
!! | AGGTCTTATTTCTGAGGGGG+TGG | + | tig0019188:85559-85578 | Msa1371220:intron | 50.0% |
!! | GGTCTTATTTCTGAGGGGGT+GGG | + | tig0019188:85560-85579 | Msa1371220:intron | 50.0% |
TGAGGGGGTGGGTATAACAT+GGG | + | tig0019188:85571-85590 | Msa1371220:intron | 50.0% | |
TGACTATGGCCAAGATGGCT+AGG | + | tig0019188:85987-86006 | Msa1371220:intron | 50.0% | |
! | GTGCAAATCTCTGGAAACCC+GGG | + | tig0019188:86346-86365 | Msa1371220:CDS | 50.0% |
TGATTGGAGTAGGGTGGAGA+AGG | - | tig0019188:86932-86951 | None:intergenic | 50.0% | |
! | TTTGGTTCAGAGGACGAGAG+AGG | - | tig0019188:86984-87003 | None:intergenic | 50.0% |
!! | GCGCCCTAGCATTAGCTTTA+GGG | - | tig0019188:87142-87161 | None:intergenic | 50.0% |
!! | TGCGCCCTAGCATTAGCTTT+AGG | - | tig0019188:87143-87162 | None:intergenic | 50.0% |
CTTCTCAAGCAGCTCTTGGA+TGG | - | tig0019188:88038-88057 | None:intergenic | 50.0% | |
CATCCAAGAGCTGCTTGAGA+AGG | + | tig0019188:88036-88055 | Msa1371220:CDS | 50.0% | |
GCTTCTGAGTGGTGCATCTA+TGG | + | tig0019188:88136-88155 | Msa1371220:three_prime_UTR | 50.0% | |
TCTGAGTGGTGCATCTATGG+TGG | + | tig0019188:88139-88158 | Msa1371220:three_prime_UTR | 50.0% | |
TGGTGCATCTATGGTGGCAT+TGG | + | tig0019188:88145-88164 | Msa1371220:three_prime_UTR | 50.0% | |
GGTGCATCTATGGTGGCATT+GGG | + | tig0019188:88146-88165 | Msa1371220:three_prime_UTR | 50.0% | |
CTGAGTTCGATGACCGAGTC+AGG | - | tig0019188:79723-79742 | None:intergenic | 55.0% | |
!!! | GGTGGTGCTATTTTACCGGC+GGG | + | tig0019188:79831-79850 | Msa1371220:CDS | 55.0% |
AGAGGACTGAGAAATCCCGC+CGG | - | tig0019188:79849-79868 | None:intergenic | 55.0% | |
GGAGAAGGAGAAGGAGCAAG+AGG | - | tig0019188:79867-79886 | None:intergenic | 55.0% | |
!! | TTATTGACAGGCGTCGACGC+CGG | - | tig0019188:79888-79907 | None:intergenic | 55.0% |
! | GCGTCGACGCCTGTCAATAA+TGG | + | tig0019188:79888-79907 | Msa1371220:CDS | 55.0% |
TGTCTTTGCCTGCGCCTGAA+TGG | + | tig0019188:79916-79935 | Msa1371220:CDS | 55.0% | |
GTCTTTGCCTGCGCCTGAAT+GGG | + | tig0019188:79917-79936 | Msa1371220:CDS | 55.0% | |
! | GAAGATTCGAAGGCACGAGC+AGG | - | tig0019188:80032-80051 | None:intergenic | 55.0% |
GGGCCTGGTAATCCAGAGTT+TGG | + | tig0019188:80454-80473 | Msa1371220:intron | 55.0% | |
AGGGGGATGGTACTTCGAGT+TGG | + | tig0019188:80512-80531 | Msa1371220:intron | 55.0% | |
! | TTCAGATAACGGCGGTGGGA+TGG | + | tig0019188:81499-81518 | Msa1371220:intron | 55.0% |
! | GAGAAGCATGCCTAGTTCGG+AGG | - | tig0019188:82211-82230 | None:intergenic | 55.0% |
CACAGTCATTGGGGGCTTTG+GGG | - | tig0019188:82373-82392 | None:intergenic | 55.0% | |
GCACAGTCATTGGGGGCTTT+GGG | - | tig0019188:82374-82393 | None:intergenic | 55.0% | |
AGCACAGTCATTGGGGGCTT+TGG | - | tig0019188:82375-82394 | None:intergenic | 55.0% | |
ATCAGGCCTACACGGAGCAT+AGG | + | tig0019188:82504-82523 | Msa1371220:intron | 55.0% | |
AGCAAGCCTATGCTCCGTGT+AGG | - | tig0019188:82513-82532 | None:intergenic | 55.0% | |
ACTAAAGCTCCCGCATACGC+AGG | + | tig0019188:82698-82717 | Msa1371220:intron | 55.0% | |
CTAAAGCTCCCGCATACGCA+GGG | + | tig0019188:82699-82718 | Msa1371220:intron | 55.0% | |
GATCCCCCCCTCTAAATACC+TGG | - | tig0019188:83066-83085 | None:intergenic | 55.0% | |
CATACAGCAGGCCAGGAATG+TGG | - | tig0019188:83575-83594 | None:intergenic | 55.0% | |
GTCACGTACAGGCCTCAATC+TGG | + | tig0019188:83902-83921 | Msa1371220:CDS | 55.0% | |
!! | TTTTAAAGGGGGCAGGGGCA+GGG | - | tig0019188:84198-84217 | None:intergenic | 55.0% |
!! | ATTTTAAAGGGGGCAGGGGC+AGG | - | tig0019188:84199-84218 | None:intergenic | 55.0% |
! | TGGAGGATCTGGAATCCAGC+AGG | + | tig0019188:84535-84554 | Msa1371220:CDS | 55.0% |
TGGAATCCAGCAGGAAGTGG+TGG | + | tig0019188:84544-84563 | Msa1371220:CDS | 55.0% | |
GAACCTGCCCATGACAAGCA+AGG | + | tig0019188:84687-84706 | Msa1371220:CDS | 55.0% | |
AAGCCTTGCTTGTCATGGGC+AGG | - | tig0019188:84693-84712 | None:intergenic | 55.0% | |
CTGAGGGGGTGGGTATAACA+TGG | + | tig0019188:85570-85589 | Msa1371220:intron | 55.0% | |
GTTCAGAGGACGAGAGAGGA+GGG | - | tig0019188:86980-86999 | None:intergenic | 55.0% | |
ACCCGCTCCGATACCTGACT+CGG | + | tig0019188:79707-79726 | Msa1371220:CDS | 60.0% | |
!! | ACCGAGTCAGGTATCGGAGC+GGG | - | tig0019188:79711-79730 | None:intergenic | 60.0% |
!! | GACCGAGTCAGGTATCGGAG+CGG | - | tig0019188:79712-79731 | None:intergenic | 60.0% |
GGTTGTTGCTACCGCTACGG+CGG | + | tig0019188:79773-79792 | Msa1371220:CDS | 60.0% | |
GGAAGGACTTTCCGCCGTAG+CGG | - | tig0019188:79787-79806 | None:intergenic | 60.0% | |
GTAGAAGCCCATTCAGGCGC+AGG | - | tig0019188:79927-79946 | None:intergenic | 60.0% | |
CCCTGATAAGGGGAGGGCTA+GGG | - | tig0019188:80429-80448 | None:intergenic | 60.0% | |
CCCTAGCCCTCCCCTTATCA+GGG | + | tig0019188:80426-80445 | Msa1371220:intron | 60.0% | |
CCTAGCCCTCCCCTTATCAG+GGG | + | tig0019188:80427-80446 | Msa1371220:intron | 60.0% | |
CCCTTCCCCTGATAAGGGGA+GGG | - | tig0019188:80435-80454 | None:intergenic | 60.0% | |
CCCTCCCCTTATCAGGGGAA+GGG | + | tig0019188:80432-80451 | Msa1371220:intron | 60.0% | |
CCTCCCCTTATCAGGGGAAG+GGG | + | tig0019188:80433-80452 | Msa1371220:intron | 60.0% | |
CTCCCCTTATCAGGGGAAGG+GGG | + | tig0019188:80434-80453 | Msa1371220:intron | 60.0% | |
AGGCCCCCTTCCCCTGATAA+GGG | - | tig0019188:80440-80459 | None:intergenic | 60.0% | |
GCCCCCAATGACTGTGCTTG+AGG | + | tig0019188:82377-82396 | Msa1371220:intron | 60.0% | |
! | TGCGGGAGCTTTAGTGCACC+AGG | - | tig0019188:82693-82712 | None:intergenic | 60.0% |
TGAGGCCGACCTTCTTAGCC+AGG | + | tig0019188:83045-83064 | Msa1371220:CDS | 60.0% | |
GGAGGATGACCAAGGTCAGC+TGG | + | tig0019188:83257-83276 | Msa1371220:CDS | 60.0% | |
ATGCCCCACCTATGACCCCA+CGG | - | tig0019188:84570-84589 | None:intergenic | 60.0% | |
GAGGACGAGAGAGGAGGGAA+GGG | - | tig0019188:86975-86994 | None:intergenic | 60.0% | |
AGAGGACGAGAGAGGAGGGA+AGG | - | tig0019188:86976-86995 | None:intergenic | 60.0% | |
GGTTCAGAGGACGAGAGAGG+AGG | - | tig0019188:86981-87000 | None:intergenic | 60.0% | |
GTCGACGCCGGAGAAGGAGA+AGG | - | tig0019188:79876-79895 | None:intergenic | 65.0% | |
GCCCTAGCCCTCCCCTTATC+AGG | + | tig0019188:80425-80444 | Msa1371220:intron | 65.0% | |
CCCCTGATAAGGGGAGGGCT+AGG | - | tig0019188:80430-80449 | None:intergenic | 65.0% | |
GCCCTCCCCTTATCAGGGGA+AGG | + | tig0019188:80431-80450 | Msa1371220:intron | 65.0% | |
CCCCTTCCCCTGATAAGGGG+AGG | - | tig0019188:80436-80455 | None:intergenic | 65.0% | |
GGCCCCCTTCCCCTGATAAG+GGG | - | tig0019188:80439-80458 | None:intergenic | 65.0% | |
CAGGCCCCCTTCCCCTGATA+AGG | - | tig0019188:80441-80460 | None:intergenic | 65.0% | |
CTTATCAGGGGAAGGGGGCC+TGG | + | tig0019188:80439-80458 | Msa1371220:intron | 65.0% | |
TTCCCGGACCCTGCGTATGC+GGG | - | tig0019188:82710-82729 | None:intergenic | 65.0% | |
CTTCCCGGACCCTGCGTATG+CGG | - | tig0019188:82711-82730 | None:intergenic | 65.0% | |
GCATACGCAGGGTCCGGGAA+GGG | + | tig0019188:82710-82729 | Msa1371220:intron | 65.0% | |
CATACGCAGGGTCCGGGAAG+GGG | + | tig0019188:82711-82730 | Msa1371220:intron | 65.0% | |
! | GACATGGTGGGACCCCTTCC+CGG | - | tig0019188:82726-82745 | None:intergenic | 65.0% |
CAGCAGGAAGTGGTGGCCGT+GGG | + | tig0019188:84551-84570 | Msa1371220:CDS | 65.0% | |
AGCAGGAAGTGGTGGCCGTG+GGG | + | tig0019188:84552-84571 | Msa1371220:CDS | 65.0% | |
AGTGGTGGCCGTGGGGTCAT+AGG | + | tig0019188:84559-84578 | Msa1371220:CDS | 65.0% | |
GTGGCCGTGGGGTCATAGGT+GGG | + | tig0019188:84563-84582 | Msa1371220:intron | 65.0% | |
TGGCCGTGGGGTCATAGGTG+GGG | + | tig0019188:84564-84583 | Msa1371220:intron | 65.0% | |
!! | ACAGGCGTCGACGCCGGAGA+AGG | - | tig0019188:79882-79901 | None:intergenic | 70.0% |
GCTCCCGCATACGCAGGGTC+CGG | + | tig0019188:82704-82723 | Msa1371220:intron | 70.0% | |
CTCCCGCATACGCAGGGTCC+GGG | + | tig0019188:82705-82724 | Msa1371220:intron | 70.0% | |
CGCATACGCAGGGTCCGGGA+AGG | + | tig0019188:82709-82728 | Msa1371220:intron | 70.0% | |
CCACGGCCACCACTTCCTGC+TGG | - | tig0019188:84553-84572 | None:intergenic | 70.0% | |
CCAGCAGGAAGTGGTGGCCG+TGG | + | tig0019188:84550-84569 | Msa1371220:CDS | 70.0% | |
GGTGGCCGTGGGGTCATAGG+TGG | + | tig0019188:84562-84581 | Msa1371220:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0019188 | gene | 79479 | 88400 | 79479 | ID=Msa1371220;Name=Msa1371220 |
tig0019188 | mRNA | 79479 | 88400 | 79479 | ID=Msa1371220-mRNA-1;Parent=Msa1371220;Name=Msa1371220-mRNA-1;_AED=0.13;_eAED=0.13;_QI=148|0.83|0.84|1|1|1|19|298|794 |
tig0019188 | exon | 79479 | 80056 | 79479 | ID=Msa1371220-mRNA-1:exon:2100;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 80588 | 80662 | 80588 | ID=Msa1371220-mRNA-1:exon:2101;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 80777 | 80811 | 80777 | ID=Msa1371220-mRNA-1:exon:2102;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 80902 | 80980 | 80902 | ID=Msa1371220-mRNA-1:exon:2103;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 81504 | 81596 | 81504 | ID=Msa1371220-mRNA-1:exon:2104;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 81682 | 81766 | 81682 | ID=Msa1371220-mRNA-1:exon:2105;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 82509 | 82584 | 82509 | ID=Msa1371220-mRNA-1:exon:2106;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 82938 | 83066 | 82938 | ID=Msa1371220-mRNA-1:exon:2107;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 83207 | 83305 | 83207 | ID=Msa1371220-mRNA-1:exon:2108;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 83405 | 83506 | 83405 | ID=Msa1371220-mRNA-1:exon:2109;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 83791 | 83955 | 83791 | ID=Msa1371220-mRNA-1:exon:2110;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 84034 | 84129 | 84034 | ID=Msa1371220-mRNA-1:exon:2111;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 84529 | 84580 | 84529 | ID=Msa1371220-mRNA-1:exon:2112;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 84664 | 84775 | 84664 | ID=Msa1371220-mRNA-1:exon:2113;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 84877 | 84950 | 84877 | ID=Msa1371220-mRNA-1:exon:2114;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 85022 | 85435 | 85022 | ID=Msa1371220-mRNA-1:exon:2115;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 86071 | 86173 | 86071 | ID=Msa1371220-mRNA-1:exon:2116;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 86283 | 86367 | 86283 | ID=Msa1371220-mRNA-1:exon:2117;Parent=Msa1371220-mRNA-1 |
tig0019188 | exon | 88022 | 88400 | 88022 | ID=Msa1371220-mRNA-1:exon:2118;Parent=Msa1371220-mRNA-1 |
tig0019188 | five_prime_UTR | 79479 | 79626 | 79479 | ID=Msa1371220-mRNA-1:five_prime_utr;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 79627 | 80056 | 79627 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 80588 | 80662 | 80588 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 80777 | 80811 | 80777 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 80902 | 80980 | 80902 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 81504 | 81596 | 81504 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 81682 | 81766 | 81682 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 82509 | 82584 | 82509 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 82938 | 83066 | 82938 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 83207 | 83305 | 83207 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 83405 | 83506 | 83405 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 83791 | 83955 | 83791 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 84034 | 84129 | 84034 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 84529 | 84580 | 84529 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 84664 | 84775 | 84664 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 84877 | 84950 | 84877 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 85022 | 85435 | 85022 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 86071 | 86173 | 86071 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 86283 | 86367 | 86283 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | CDS | 88022 | 88102 | 88022 | ID=Msa1371220-mRNA-1:cds;Parent=Msa1371220-mRNA-1 |
tig0019188 | three_prime_UTR | 88103 | 88400 | 88103 | ID=Msa1371220-mRNA-1:three_prime_utr;Parent=Msa1371220-mRNA-1 |
Gene Sequence |
Protein sequence |