AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0389910


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0389910 MtrunA17_Chr5g0397161 95.989 374 8 1 1 367 1 374 0.0 736
Msa0389910 MtrunA17_Chr6g0470241 62.567 374 116 5 1 367 1 357 3.43e-164 463
Msa0389910 MtrunA17_Chr5g0398901 38.835 103 63 0 1 103 1 103 8.91e-17 81.6
Msa0389910 MtrunA17_Chr5g0398901 29.060 117 83 0 1 117 391 507 6.34e-12 67.0
Msa0389910 MtrunA17_Chr3g0097231 34.211 114 75 0 2 115 11 124 9.84e-16 78.2
Msa0389910 MtrunA17_Chr7g0274241 31.250 112 77 0 2 113 335 446 3.51e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0389910 AT4G23570.1 65.323 372 100 8 1 366 1 349 6.18e-157 445
Msa0389910 AT4G23570.2 65.323 372 100 8 1 366 1 349 6.18e-157 445
Msa0389910 AT4G11260.1 63.415 369 122 5 1 367 1 358 1.76e-156 444
Msa0389910 AT4G23570.3 65.147 373 100 9 1 366 1 350 3.21e-155 441
Msa0389910 AT2G42810.2 29.747 158 110 1 2 159 13 169 1.45e-16 81.6
Msa0389910 AT2G42810.3 29.747 158 110 1 2 159 13 169 1.58e-16 81.3
Msa0389910 AT2G42810.1 31.944 144 96 2 2 145 13 154 7.34e-16 79.3
Msa0389910 AT2G42810.5 31.944 144 96 2 2 145 13 154 7.34e-16 79.3
Msa0389910 AT2G42810.4 31.944 144 96 2 2 145 13 154 7.34e-16 79.3
Msa0389910 AT4G12400.1 34.783 115 75 0 1 115 1 115 1.08e-15 79.0
Msa0389910 AT4G12400.1 31.858 113 77 0 1 113 368 480 1.70e-13 72.0
Msa0389910 AT4G12400.2 34.783 115 75 0 1 115 1 115 1.15e-15 79.0
Msa0389910 AT4G12400.2 31.858 113 77 0 1 113 368 480 1.63e-13 72.0
Msa0389910 AT1G04190.1 34.091 132 77 2 5 129 18 146 1.31e-15 77.4
Msa0389910 AT1G62740.1 38.614 101 62 0 1 101 1 101 7.52e-15 76.3
Msa0389910 AT1G62740.1 29.365 126 89 0 1 126 381 506 4.04e-12 67.8
Msa0389910 AT1G12270.1 36.634 101 64 0 1 101 1 101 2.23e-14 74.7
Msa0389910 AT1G12270.1 29.365 126 89 0 1 126 382 507 5.29e-12 67.4
Msa0389910 AT3G04710.3 34.737 95 62 0 8 102 558 652 2.84e-13 71.6
Msa0389910 AT3G04710.2 31.429 105 72 0 8 112 333 437 4.40e-13 70.5
Msa0389910 AT3G04710.1 31.429 105 72 0 8 112 334 438 4.45e-13 70.5
Msa0389910 AT4G22670.1 38.636 88 54 0 2 89 123 210 5.59e-12 67.0

Find 99 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCAGACGAATTTCAATTT+TGG 0.202093 3_2:-469208 None:intergenic
TAAAATTCAAACCTGTATTT+TGG 0.207831 3_2:-468165 None:intergenic
AGATAAGCTTTAGACAAATT+AGG 0.217599 3_2:-466878 None:intergenic
TCATGTCCTCATCTGCATTT+TGG 0.223925 3_2:-470261 None:intergenic
TGCATTTGTTTGGGATTCTT+TGG 0.233284 3_2:-468127 None:intergenic
GTACATTTGGAGTGTATATT+TGG 0.235794 3_2:+471015 Msa0389910:three_prime_UTR
CTGAAGGCACGATTATCTTT+TGG 0.246738 3_2:-469284 None:intergenic
ACCACAACTTTGCACTTATC+AGG 0.255504 3_2:-469177 None:intergenic
TTGAATCAAATTAGTGAATC+TGG 0.262555 3_2:-467087 None:intergenic
CTCAAATACTTCTTATGCTT+TGG 0.268433 3_2:+470548 Msa0389910:three_prime_UTR
AATTACCAACCTCGATTGTT+TGG 0.273321 3_2:+468974 Msa0389910:CDS
GATAAGCTTTAGACAAATTA+GGG 0.273607 3_2:-466877 None:intergenic
CTGGTGCAACTGCATTTGTT+TGG 0.277385 3_2:-468137 None:intergenic
ATTGACTAATTTGCATTTGC+TGG 0.284570 3_2:+470669 Msa0389910:three_prime_UTR
CAAAAGCTGAAGCAATTAAT+TGG 0.291230 3_2:+469229 Msa0389910:CDS
CAACCACTTCTTCTGGCTTC+TGG 0.307212 3_2:-468715 None:intergenic
AACAGACGCAGCAGATGATT+TGG 0.309310 3_2:-468067 None:intergenic
AGCTGTTTCTGATGCTAATA+AGG 0.317013 3_2:+466841 Msa0389910:CDS
ATTGTCACAACCACTTCTTC+TGG 0.326332 3_2:-468722 None:intergenic
TTCTTCACCTCCATGCCTTC+CGG 0.334065 3_2:-470505 None:intergenic
CACTTTGGAAATACTAAGTA+TGG 0.339683 3_2:+470978 Msa0389910:three_prime_UTR
CATCACTCTTATCACACATA+TGG 0.343614 3_2:-468098 None:intergenic
GCAGATGATTTGGGTTCATT+TGG 0.361318 3_2:-468057 None:intergenic
TGGTGCAACTGCATTTGTTT+GGG 0.369271 3_2:-468136 None:intergenic
GAACAGTGCTTTCAACTGAT+TGG 0.383406 3_2:+470446 Msa0389910:CDS
AGTGTTACCATTGATGTTCC+TGG 0.384771 3_2:+468938 Msa0389910:CDS
GATCAACATGTTCGTACATT+TGG 0.388225 3_2:+471002 Msa0389910:three_prime_UTR
TGCTAAGATTGCACTTGAAA+AGG 0.395581 3_2:+467040 Msa0389910:CDS
ATTTGGGTTCATTTGGTGGT+AGG 0.397979 3_2:-468050 None:intergenic
GCTAAGATTGCACTTGAAAA+GGG 0.398330 3_2:+467041 Msa0389910:CDS
GACTAAGGATTGGGATAAGT+TGG 0.404465 3_2:+469664 Msa0389910:CDS
CAAATTAGGGTTCAATTGAA+TGG 0.412131 3_2:-466864 None:intergenic
ACAGACGCAGCAGATGATTT+GGG 0.413414 3_2:-468066 None:intergenic
CAAAAGATAATCGTGCCTTC+AGG 0.416666 3_2:+469285 Msa0389910:CDS
AGCAATTAATTGGACATCTC+TGG 0.420967 3_2:+469239 Msa0389910:CDS
GTTGTGACAATATTTGCAAA+AGG 0.432373 3_2:+468734 Msa0389910:CDS
GACTTTGATGACGGATATGC+AGG 0.432961 3_2:-469638 None:intergenic
ATTTCGGTTGTGAAACACTT+TGG 0.439531 3_2:+470963 Msa0389910:three_prime_UTR
AAGGCATGGAGGTGAAGAAA+TGG 0.447230 3_2:+470509 Msa0389910:CDS
ATTTGCATTTGCTGGGGAAG+TGG 0.448866 3_2:+470677 Msa0389910:three_prime_UTR
TTGACTAATTTGCATTTGCT+GGG 0.450378 3_2:+470670 Msa0389910:three_prime_UTR
TTTGAAGTATAGTATAGTAT+TGG 0.451288 3_2:-466601 None:intergenic
GAGAAAGAAGAAAAGCTTGA+TGG 0.457639 3_2:+470202 Msa0389910:CDS
TTTGGGTTCATTTGGTGGTA+GGG 0.457656 3_2:-468049 None:intergenic
GAAAATGTTGTTGTGGACTT+TGG 0.457793 3_2:+468767 Msa0389910:CDS
TTCAACTGATTGGAAAGAAG+TGG 0.459056 3_2:+470456 Msa0389910:CDS
CAAAGTCAAGGACTAAGGAT+TGG 0.459819 3_2:+469654 Msa0389910:CDS
AACCAAAATTGAAATTCGTC+TGG 0.463865 3_2:+469206 Msa0389910:CDS
GTTGGTAATTGTAGGCATCT+TGG 0.464918 3_2:-468961 None:intergenic
GGCGAAGAGATTGGCGTTGG+TGG 0.466384 3_2:-466777 None:intergenic
CAATCGAGGTTGGTAATTGT+AGG 0.468328 3_2:-468969 None:intergenic
TGCTCGATCGGCGAAGAGAT+TGG 0.468339 3_2:-466786 None:intergenic
ATCACTCTTATCACACATAT+GGG 0.469660 3_2:-468097 None:intergenic
GATGATTTGGGTTCATTTGG+TGG 0.474276 3_2:-468054 None:intergenic
CACCAGTCAGACCAAAATAC+AGG 0.477363 3_2:+468154 Msa0389910:CDS
AAAGTCAAGGACTAAGGATT+GGG 0.477566 3_2:+469655 Msa0389910:CDS
ACATCGCAGCTGGAGTCAAA+TGG 0.493337 3_2:+470424 Msa0389910:intron
TAATTGTAGGCATCTTGGCC+AGG 0.499111 3_2:-468956 None:intergenic
GTCATCAAAGTCAAGGACTA+AGG 0.505114 3_2:+469649 Msa0389910:CDS
TTGTGACAATATTTGCAAAA+GGG 0.517563 3_2:+468735 Msa0389910:CDS
CTAAAGCTTATCTTCGCAAA+GGG 0.517803 3_2:+466888 Msa0389910:CDS
AGGCATGGAGGTGAAGAAAT+GGG 0.525573 3_2:+470510 Msa0389910:CDS
GTGGGATCAAAGAAGGTGGA+AGG 0.527275 3_2:+470475 Msa0389910:CDS
ACCTGATAAGTGCAAAGTTG+TGG 0.535317 3_2:+469176 Msa0389910:CDS
TCTAAAGCTTATCTTCGCAA+AGG 0.536711 3_2:+466887 Msa0389910:CDS
TGTCAACGCTTCATTGCTGC+TGG 0.540905 3_2:+467113 Msa0389910:CDS
TTGGTGGTAGGGTGCTCGTA+AGG 0.545824 3_2:-468038 None:intergenic
TTAGTCCTTGACTTTGATGA+CGG 0.547734 3_2:-469647 None:intergenic
ATACAATTGATCACCATACT+TGG 0.548968 3_2:-470808 None:intergenic
GAAAGAAGTGGGATCAAAGA+AGG 0.549782 3_2:+470468 Msa0389910:CDS
AGAAGTGGGATCAAAGAAGG+TGG 0.550429 3_2:+470471 Msa0389910:CDS
TCAACTGATTGGAAAGAAGT+GGG 0.552602 3_2:+470457 Msa0389910:CDS
AGGAAGTCCTCCGGAAGGCA+TGG 0.553293 3_2:+470495 Msa0389910:CDS
GATATAAGATTGTGCTCGAT+CGG 0.556317 3_2:-466798 None:intergenic
CCTTTCCAAACAATCGAGGT+TGG 0.558787 3_2:-468979 None:intergenic
TTCACCTCCATGCCTTCCGG+AGG 0.562191 3_2:-470502 None:intergenic
ATCGGCGAAGAGATTGGCGT+TGG 0.564003 3_2:-466780 None:intergenic
TTAGTGAATCTGGAATCATC+AGG 0.564312 3_2:-467077 None:intergenic
TTACCAGAAGCCAGAAGAAG+TGG 0.567554 3_2:+468712 Msa0389910:CDS
ATCTTGGCCAGGAACATCAA+TGG 0.567721 3_2:-468945 None:intergenic
CCAACCTCGATTGTTTGGAA+AGG 0.572336 3_2:+468979 Msa0389910:CDS
GCGAAGAGATTGGCGTTGGT+GGG 0.574698 3_2:-466776 None:intergenic
GAAGGTGGAAGGAAGTCCTC+CGG 0.593651 3_2:+470486 Msa0389910:CDS
GACATCTCTGGAATATAGCA+AGG 0.594841 3_2:+469251 Msa0389910:CDS
CTAAGATTGCACTTGAAAAG+GGG 0.595811 3_2:+467042 Msa0389910:CDS
ACCAGCAGAAAATGTTGTTG+TGG 0.599108 3_2:+468760 Msa0389910:CDS
TTTCTGCAGTTCAATCTGAA+AGG 0.605938 3_2:+469615 Msa0389910:intron
TGACTAATTTGCATTTGCTG+AGG 0.614304 3_2:+470855 Msa0389910:three_prime_UTR
CATATCCGTCATCAAAGTCA+AGG 0.618238 3_2:+469642 Msa0389910:CDS
GTTACCTTTCCAAACAATCG+AGG 0.633356 3_2:-468983 None:intergenic
TAAGATTGCACTTGAAAAGG+GGG 0.634057 3_2:+467043 Msa0389910:CDS
TATTTACCAAAATGCAGATG+AGG 0.640349 3_2:+470255 Msa0389910:CDS
AAAATGCAGATGAGGACATG+AGG 0.646902 3_2:+470263 Msa0389910:CDS
AAGCATAAGAAGTATTTGAG+TGG 0.649495 3_2:-470545 None:intergenic
TGGTAACAACTAATTCACAA+TGG 0.651694 3_2:+471035 Msa0389910:three_prime_UTR
TGACTAATTTGCATTTGCTG+GGG 0.656804 3_2:+470671 Msa0389910:three_prime_UTR
GTGGAAGGAAGTCCTCCGGA+AGG 0.675797 3_2:+470490 Msa0389910:CDS
AAGTCCTCCGGAAGGCATGG+AGG 0.703156 3_2:+470498 Msa0389910:CDS
TGCTTGAGAGTAGAAATCAA+CGG 0.719116 3_2:-466741 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTATGTTTTGTTTTT+AGG + chr3_2:466937-466956 Msa0389910:intron 10.0%
!!! ATATTTATGTTTTGTTTTTA+GGG + chr3_2:466938-466957 Msa0389910:intron 10.0%
!!! TGATTTTTGTAAATTTTATT+TGG + chr3_2:467172-467191 Msa0389910:intron 10.0%
!!! TTTTGGTTTTATTTAAATTT+AGG + chr3_2:467283-467302 Msa0389910:intron 10.0%
!! ATTATAGTTATACAATAATA+AGG - chr3_2:468389-468408 None:intergenic 10.0%
!!! TTTTAATCAAAAGTTTTTAA+GGG + chr3_2:468449-468468 Msa0389910:intron 10.0%
!!! TAATTTTCTCTAATTATTAT+CGG + chr3_2:469431-469450 Msa0389910:intron 10.0%
!!! TTATGTTTTTATTTATTTAG+GGG + chr3_2:469727-469746 Msa0389910:intron 10.0%
!!! GATTTTAATTATACTATTAT+TGG + chr3_2:470329-470348 Msa0389910:intron 10.0%
!! AAATTAAAAACTAAAATTCT+GGG - chr3_2:470757-470776 None:intergenic 10.0%
!! AAAATTAAAAACTAAAATTC+TGG - chr3_2:470758-470777 None:intergenic 10.0%
!! AATATAAAAACTAAAATTCT+GGG - chr3_2:470946-470965 None:intergenic 10.0%
!! AAATATAAAAACTAAAATTC+TGG - chr3_2:470947-470966 None:intergenic 10.0%
!!! GAATTTTAGTTTTTATATTT+CGG + chr3_2:470947-470966 Msa0389910:three_prime_UTR 10.0%
!!! TGAATTTGTTTTATATTTGT+AGG + chr3_2:466985-467004 Msa0389910:intron 15.0%
!!! AAAATTAAGAAACTTGTTTT+TGG + chr3_2:467266-467285 Msa0389910:intron 15.0%
!! TAGATATTAAAAAAATTTGC+AGG - chr3_2:467411-467430 None:intergenic 15.0%
!!! TGCAAATTTTTTTAATATCT+AGG + chr3_2:467410-467429 Msa0389910:intron 15.0%
!! ACAATTTCAATTTAAAAACT+TGG + chr3_2:467447-467466 Msa0389910:intron 15.0%
!!! ACTTTTGATTAAAAGTTTTT+CGG - chr3_2:468443-468462 None:intergenic 15.0%
!!! CTTTTAATCAAAAGTTTTTA+AGG + chr3_2:468448-468467 Msa0389910:intron 15.0%
!! AGTGATATACATATAAAATA+AGG - chr3_2:468859-468878 None:intergenic 15.0%
!! TAATTGTTGAATGAATAAAT+AGG + chr3_2:469538-469557 Msa0389910:intron 15.0%
!! AAAAAATTATGTATGCAAAT+TGG + chr3_2:469872-469891 Msa0389910:intron 15.0%
!!! TTATTGTCATTTTATGAATA+CGG + chr3_2:469902-469921 Msa0389910:intron 15.0%
!!! TATTCATGTATTCAAAATTT+TGG - chr3_2:470097-470116 None:intergenic 15.0%
!!! TTTGAAGTATAGTATAGTAT+TGG - chr3_2:466604-466623 None:intergenic 20.0%
!!! ACTGTATTTAATTTGTGAAA+AGG + chr3_2:467823-467842 Msa0389910:intron 20.0%
!! AAAAATTATCTAGTCATCAA+AGG - chr3_2:467860-467879 None:intergenic 20.0%
!!! TTTTTCTTTTGCAAATATTG+TGG + chr3_2:467918-467937 Msa0389910:intron 20.0%
!!! AATATTGTGGTTTAGATTTT+CGG + chr3_2:467931-467950 Msa0389910:intron 20.0%
!! TGAAAAAAATAAGAAACATC+AGG - chr3_2:468004-468023 None:intergenic 20.0%
!!! ATGTTTCTTATTTTTTTCAG+AGG + chr3_2:468005-468024 Msa0389910:intron 20.0%
!!! TAAAATTCAAACCTGTATTT+TGG - chr3_2:468168-468187 None:intergenic 20.0%
!!! CTTCATTCATTTAATTTTGT+TGG + chr3_2:468212-468231 Msa0389910:intron 20.0%
!! TTAAATAAAAAACATGCAAG+CGG - chr3_2:468324-468343 None:intergenic 20.0%
!! ATATAAAATAAGGAGAACAA+TGG - chr3_2:468849-468868 None:intergenic 20.0%
!!! TATTATCTGTTTTGTTCATA+AGG - chr3_2:469157-469176 None:intergenic 20.0%
!!! CTTAAGTTTAGTTATGATTT+TGG + chr3_2:469765-469784 Msa0389910:intron 20.0%
!!! TATTGTCATTTTATGAATAC+GGG + chr3_2:469903-469922 Msa0389910:intron 20.0%
!!! TGGATTAATTTTAAAACTGT+AGG + chr3_2:469981-470000 Msa0389910:intron 20.0%
!! AGATGAAATTAACATACAAT+TGG - chr3_2:470121-470140 None:intergenic 20.0%
!! CAATGTCAATTATTAAAACA+AGG - chr3_2:470164-470183 None:intergenic 20.0%
!!! TGTTTTAATAATTGACATTG+TGG + chr3_2:470164-470183 Msa0389910:intron 20.0%
!!! TGTATGATATGTTATTTTTC+TGG + chr3_2:470642-470661 Msa0389910:three_prime_UTR 20.0%
!!! GTATGATATGTTATTTTTCT+GGG + chr3_2:470643-470662 Msa0389910:three_prime_UTR 20.0%
!!! TGTATGTTGATTTTAGTTAT+CGG + chr3_2:470715-470734 Msa0389910:three_prime_UTR 20.0%
!!! GATAAGCTTTAGACAAATTA+GGG - chr3_2:466880-466899 None:intergenic 25.0%
!!! AGATAAGCTTTAGACAAATT+AGG - chr3_2:466881-466900 None:intergenic 25.0%
!!! TTTGTTTTTAGGGTTGTTTT+TGG + chr3_2:466948-466967 Msa0389910:intron 25.0%
!!! TTGTTTTTAGGGTTGTTTTT+GGG + chr3_2:466949-466968 Msa0389910:intron 25.0%
! TTGAATCAAATTAGTGAATC+TGG - chr3_2:467090-467109 None:intergenic 25.0%
! AAAATTTGCAGGAGTAAATA+TGG - chr3_2:467400-467419 None:intergenic 25.0%
! AAAAATTTGCAAGTCATCAA+AGG - chr3_2:467657-467676 None:intergenic 25.0%
! ATCAGATCATATAAACAAGT+TGG - chr3_2:467795-467814 None:intergenic 25.0%
!! TGACTAGATAATTTTTGTGA+AGG + chr3_2:467864-467883 Msa0389910:intron 25.0%
!!! TGTTTTAAGGAAATAGTAAC+TGG - chr3_2:468504-468523 None:intergenic 25.0%
! TTCAAAAGAAATAGACAAAC+TGG - chr3_2:468602-468621 None:intergenic 25.0%
! TGAATATAGACTGAAATTAC+TGG + chr3_2:468638-468657 Msa0389910:intron 25.0%
! TTGTGACAATATTTGCAAAA+GGG + chr3_2:468735-468754 Msa0389910:CDS 25.0%
! TATATCACTCTTAATATACC+TGG + chr3_2:468870-468889 Msa0389910:intron 25.0%
! TGTTAATGTACTTAAGAGTT+GGG - chr3_2:468909-468928 None:intergenic 25.0%
! ATGTTAATGTACTTAAGAGT+TGG - chr3_2:468910-468929 None:intergenic 25.0%
! ATTGATATTACTGTTTGCTT+TGG + chr3_2:469074-469093 Msa0389910:intron 25.0%
!!! TGTTTTGTTCATAAGGAAAA+AGG - chr3_2:469150-469169 None:intergenic 25.0%
! ATTCAACAATTACAAAACCA+TGG - chr3_2:469530-469549 None:intergenic 25.0%
! TTGCAATGAACAACATTAAT+GGG - chr3_2:469589-469608 None:intergenic 25.0%
! ATTGCAATGAACAACATTAA+TGG - chr3_2:469590-469609 None:intergenic 25.0%
!!! TATTTATTTAGGGGTTTTGA+AGG + chr3_2:469736-469755 Msa0389910:intron 25.0%
!!! ATTTATTTAGGGGTTTTGAA+GGG + chr3_2:469737-469756 Msa0389910:intron 25.0%
! TCAGAACTACAATAATCTAA+TGG - chr3_2:469813-469832 None:intergenic 25.0%
! ATTATGTATGCAAATTGGTT+AGG + chr3_2:469877-469896 Msa0389910:intron 25.0%
!!! TACTTCACTTTTTTACATTG+AGG + chr3_2:469927-469946 Msa0389910:intron 25.0%
! TGAAACTAGACAATCTTAAA+TGG + chr3_2:470048-470067 Msa0389910:intron 25.0%
!!! GTATGATATGTTACTTTTCT+AGG + chr3_2:470827-470846 Msa0389910:three_prime_UTR 25.0%
!!! TGTATGTTGATTTTAGCTAT+CGG + chr3_2:470904-470923 Msa0389910:three_prime_UTR 25.0%
! AATTTTCAACTCACGAAGAA+AGG + chr3_2:466623-466642 Msa0389910:five_prime_UTR 30.0%
! ATTTTCAACTCACGAAGAAA+GGG + chr3_2:466624-466643 Msa0389910:five_prime_UTR 30.0%
AAGAAGAAGAAGAAGAAGAA+TGG + chr3_2:466652-466671 Msa0389910:five_prime_UTR 30.0%
CAAATTAGGGTTCAATTGAA+TGG - chr3_2:466867-466886 None:intergenic 30.0%
TGAATCAGTTTAATTGCTGA+AGG + chr3_2:467236-467255 Msa0389910:intron 30.0%
GAATCAGTTTAATTGCTGAA+GGG + chr3_2:467237-467256 Msa0389910:intron 30.0%
!!! TGTTTATGCGATTGGTTTTT+AGG + chr3_2:467595-467614 Msa0389910:intron 30.0%
!!! GTTTATGCGATTGGTTTTTA+GGG + chr3_2:467596-467615 Msa0389910:intron 30.0%
! ACTGGAGATAATTTGTGAAA+AGG + chr3_2:467620-467639 Msa0389910:intron 30.0%
ATCACTCTTATCACACATAT+GGG - chr3_2:468100-468119 None:intergenic 30.0%
ACTTATGACAGACTATGAAA+TGG - chr3_2:468273-468292 None:intergenic 30.0%
TTCTGTTAGATGACATGTTT+CGG + chr3_2:468292-468311 Msa0389910:intron 30.0%
!! TGTTTTGAGTAAGCTTACTT+TGG + chr3_2:468415-468434 Msa0389910:intron 30.0%
!! GTTTTGAGTAAGCTTACTTT+GGG + chr3_2:468416-468435 Msa0389910:intron 30.0%
!! TTTTGAGTAAGCTTACTTTG+GGG + chr3_2:468417-468436 Msa0389910:intron 30.0%
TTCCTTAAAACAAACATGCT+TGG + chr3_2:468512-468531 Msa0389910:intron 30.0%
AGATCACAAATCAATGGAAT+TGG - chr3_2:468577-468596 None:intergenic 30.0%
GTTGTGACAATATTTGCAAA+AGG + chr3_2:468734-468753 Msa0389910:CDS 30.0%
AAGGAAAAAGGTAAGTTACT+TGG - chr3_2:469138-469157 None:intergenic 30.0%
AACCAAAATTGAAATTCGTC+TGG + chr3_2:469206-469225 Msa0389910:CDS 30.0%
CAAAAGCTGAAGCAATTAAT+TGG + chr3_2:469229-469248 Msa0389910:CDS 30.0%
TTCAGTGTAATCATAACTGT+CGG - chr3_2:469404-469423 None:intergenic 30.0%
TAGTGCTTTCAATTACAGAA+TGG + chr3_2:469495-469514 Msa0389910:intron 30.0%
!!! TTCACTTTTTTACATTGAGG+TGG + chr3_2:469930-469949 Msa0389910:intron 30.0%
!!! TTTTTTACATTGAGGTGGTA+TGG + chr3_2:469935-469954 Msa0389910:intron 30.0%
! AAAATTAATCCACTTGTTGC+TGG - chr3_2:469973-469992 None:intergenic 30.0%
TGGTTAAAACAGTACTCAAT+AGG - chr3_2:470077-470096 None:intergenic 30.0%
!! CTGCATTTTGGTAAATATCA+CGG - chr3_2:470252-470271 None:intergenic 30.0%
TATTTACCAAAATGCAGATG+AGG + chr3_2:470255-470274 Msa0389910:CDS 30.0%
!! AAGCATAAGAAGTATTTGAG+TGG - chr3_2:470548-470567 None:intergenic 30.0%
CTCAAATACTTCTTATGCTT+TGG + chr3_2:470548-470567 Msa0389910:three_prime_UTR 30.0%
! ATTGACTAATTTGCATTTGC+TGG + chr3_2:470669-470688 Msa0389910:three_prime_UTR 30.0%
! TTGACTAATTTGCATTTGCT+GGG + chr3_2:470670-470689 Msa0389910:three_prime_UTR 30.0%
!!! GGAAGTGGATTTTATTTTCT+TGG + chr3_2:470692-470711 Msa0389910:three_prime_UTR 30.0%
!!! CACTTTTGAAATACCAAGTA+TGG + chr3_2:470795-470814 Msa0389910:three_prime_UTR 30.0%
ATACAATTGATCACCATACT+TGG - chr3_2:470811-470830 None:intergenic 30.0%
! CACTTTGGAAATACTAAGTA+TGG + chr3_2:470978-470997 Msa0389910:three_prime_UTR 30.0%
! GTACATTTGGAGTGTATATT+TGG + chr3_2:471015-471034 Msa0389910:three_prime_UTR 30.0%
TGCTTGAGAGTAGAAATCAA+CGG - chr3_2:466744-466763 None:intergenic 35.0%
GATATAAGATTGTGCTCGAT+CGG - chr3_2:466801-466820 None:intergenic 35.0%
!! AGCTGTTTCTGATGCTAATA+AGG + chr3_2:466841-466860 Msa0389910:CDS 35.0%
! TCTAAAGCTTATCTTCGCAA+AGG + chr3_2:466887-466906 Msa0389910:CDS 35.0%
CTAAAGCTTATCTTCGCAAA+GGG + chr3_2:466888-466907 Msa0389910:CDS 35.0%
TGCTAAGATTGCACTTGAAA+AGG + chr3_2:467040-467059 Msa0389910:CDS 35.0%
GCTAAGATTGCACTTGAAAA+GGG + chr3_2:467041-467060 Msa0389910:CDS 35.0%
CTAAGATTGCACTTGAAAAG+GGG + chr3_2:467042-467061 Msa0389910:CDS 35.0%
TAAGATTGCACTTGAAAAGG+GGG + chr3_2:467043-467062 Msa0389910:CDS 35.0%
! TTAGTGAATCTGGAATCATC+AGG - chr3_2:467080-467099 None:intergenic 35.0%
GTATGTTAATGTGTTGTGAC+TGG + chr3_2:467199-467218 Msa0389910:intron 35.0%
! TTGTGACTGGTTAGTGAAAT+TGG + chr3_2:467212-467231 Msa0389910:intron 35.0%
! TTGCAGTTTCGAGGTTTTTA+GGG + chr3_2:467325-467344 Msa0389910:intron 35.0%
TCAATAAAACCCTGAAAACC+TGG - chr3_2:467365-467384 None:intergenic 35.0%
ACACCTTGAAATTTACTCGT+TGG + chr3_2:467502-467521 Msa0389910:intron 35.0%
AGTCCAACGAGTAAATTTCA+AGG - chr3_2:467508-467527 None:intergenic 35.0%
GAATGAGTAGTGATGAAACT+AGG + chr3_2:467548-467567 Msa0389910:intron 35.0%
TGCTTACTTGTTTATGCGAT+TGG + chr3_2:467587-467606 Msa0389910:intron 35.0%
! AGTCTAATGAGCGAATTTTG+AGG - chr3_2:467739-467758 None:intergenic 35.0%
CATCACTCTTATCACACATA+TGG - chr3_2:468101-468120 None:intergenic 35.0%
! TGCATTTGTTTGGGATTCTT+TGG - chr3_2:468130-468149 None:intergenic 35.0%
GAAGAAATAGCAGCAAAAAC+AGG - chr3_2:468196-468215 None:intergenic 35.0%
TCTGTTAGATGACATGTTTC+GGG + chr3_2:468293-468312 Msa0389910:intron 35.0%
! AGGTATCGTGCAAGAAAATA+AGG - chr3_2:468349-468368 None:intergenic 35.0%
!! AAGTTTTTAAGGGAGACTGA+AGG + chr3_2:468459-468478 Msa0389910:intron 35.0%
!! AGTTTTTAAGGGAGACTGAA+GGG + chr3_2:468460-468479 Msa0389910:intron 35.0%
!!! AGCCAAGCATGTTTGTTTTA+AGG - chr3_2:468517-468536 None:intergenic 35.0%
CTGGAAAGATCACAAATCAA+TGG - chr3_2:468583-468602 None:intergenic 35.0%
!! AAATTACTGGCTCAATGTTC+TGG + chr3_2:468651-468670 Msa0389910:intron 35.0%
!! TTGATTGATGATGTTTGAGC+AGG + chr3_2:468681-468700 Msa0389910:intron 35.0%
GAAAATGTTGTTGTGGACTT+TGG + chr3_2:468767-468786 Msa0389910:CDS 35.0%
! TTGGGAAGTTTTCAATATCC+AGG - chr3_2:468891-468910 None:intergenic 35.0%
AATTACCAACCTCGATTGTT+TGG + chr3_2:468974-468993 Msa0389910:CDS 35.0%
TTGGAAACACAAACAGTAAC+TGG + chr3_2:469093-469112 Msa0389910:intron 35.0%
! TGCCAGACGAATTTCAATTT+TGG - chr3_2:469211-469230 None:intergenic 35.0%
AGCAATTAATTGGACATCTC+TGG + chr3_2:469239-469258 Msa0389910:CDS 35.0%
!! TGAAGGCACGATTATCTTTT+GGG - chr3_2:469286-469305 None:intergenic 35.0%
TTCAGGTGAGTTCATTACTT+GGG + chr3_2:469302-469321 Msa0389910:intron 35.0%
!!! CTTGGGTAGTTTTTAGTTTG+CGG + chr3_2:469319-469338 Msa0389910:intron 35.0%
TTTGCGGTATCAATCTATGA+AGG + chr3_2:469335-469354 Msa0389910:intron 35.0%
TTGCGGTATCAATCTATGAA+GGG + chr3_2:469336-469355 Msa0389910:intron 35.0%
TTTCTGCAGTTCAATCTGAA+AGG + chr3_2:469615-469634 Msa0389910:intron 35.0%
TTAGTCCTTGACTTTGATGA+CGG - chr3_2:469650-469669 None:intergenic 35.0%
AAAGTCAAGGACTAAGGATT+GGG + chr3_2:469655-469674 Msa0389910:CDS 35.0%
! GGAGCTTTTATGAAATCATG+TGG - chr3_2:469792-469811 None:intergenic 35.0%
CTGTAGGACATTGTTAAATG+TGG + chr3_2:469997-470016 Msa0389910:intron 35.0%
GAGAGACGAAAGTTGTATTT+AGG + chr3_2:470025-470044 Msa0389910:intron 35.0%
! CTTTTCTTCTTTCTCCTGAA+AGG - chr3_2:470197-470216 None:intergenic 35.0%
GAGAAAGAAGAAAAGCTTGA+TGG + chr3_2:470202-470221 Msa0389910:CDS 35.0%
TTCAACTGATTGGAAAGAAG+TGG + chr3_2:470456-470475 Msa0389910:CDS 35.0%
TCAACTGATTGGAAAGAAGT+GGG + chr3_2:470457-470476 Msa0389910:CDS 35.0%
TAGCCATTTCACTCGTTATT+AGG + chr3_2:470604-470623 Msa0389910:intron 35.0%
GAACCTAATAACGAGTGAAA+TGG - chr3_2:470610-470629 None:intergenic 35.0%
! TGACTAATTTGCATTTGCTG+GGG + chr3_2:470671-470690 Msa0389910:three_prime_UTR 35.0%
! TGACTAATTTGCATTTGCTG+AGG + chr3_2:470671-470690 Msa0389910:three_prime_UTR 35.0%
ATTTCGGTTGTGAAACACTT+TGG + chr3_2:470963-470982 Msa0389910:three_prime_UTR 35.0%
GATCAACATGTTCGTACATT+TGG + chr3_2:471002-471021 Msa0389910:three_prime_UTR 35.0%
! GTTGCAGTTTCGAGGTTTTT+AGG + chr3_2:467324-467343 Msa0389910:intron 40.0%
!!! AGGTTTTTAGGGTTTCAGTC+TGG + chr3_2:467336-467355 Msa0389910:intron 40.0%
! TTTGGGTTCATTTGGTGGTA+GGG - chr3_2:468052-468071 None:intergenic 40.0%
! ATTTGGGTTCATTTGGTGGT+AGG - chr3_2:468053-468072 None:intergenic 40.0%
! GATGATTTGGGTTCATTTGG+TGG - chr3_2:468057-468076 None:intergenic 40.0%
! GCAGATGATTTGGGTTCATT+TGG - chr3_2:468060-468079 None:intergenic 40.0%
TGGTGCAACTGCATTTGTTT+GGG - chr3_2:468139-468158 None:intergenic 40.0%
!!! AACCTGTATTTTGGTCTGAC+TGG - chr3_2:468159-468178 None:intergenic 40.0%
CATGCTTGGCTACAATTTGT+TGG + chr3_2:468526-468545 Msa0389910:intron 40.0%
!! TTGGCTACAATTTGTTGGTG+TGG + chr3_2:468531-468550 Msa0389910:intron 40.0%
ATTGTCACAACCACTTCTTC+TGG - chr3_2:468725-468744 None:intergenic 40.0%
ACCAGCAGAAAATGTTGTTG+TGG + chr3_2:468760-468779 Msa0389910:CDS 40.0%
! TCCACAACAACATTTTCTGC+TGG - chr3_2:468764-468783 None:intergenic 40.0%
GGGGGAAAATCAAATAGCAT+CGG - chr3_2:468815-468834 None:intergenic 40.0%
AGTGTTACCATTGATGTTCC+TGG + chr3_2:468938-468957 Msa0389910:CDS 40.0%
!! GTTGGTAATTGTAGGCATCT+TGG - chr3_2:468964-468983 None:intergenic 40.0%
!! CAATCGAGGTTGGTAATTGT+AGG - chr3_2:468972-468991 None:intergenic 40.0%
GTTACCTTTCCAAACAATCG+AGG - chr3_2:468986-469005 None:intergenic 40.0%
ACCTGATAAGTGCAAAGTTG+TGG + chr3_2:469176-469195 Msa0389910:CDS 40.0%
ACCACAACTTTGCACTTATC+AGG - chr3_2:469180-469199 None:intergenic 40.0%
!! GACATCTCTGGAATATAGCA+AGG + chr3_2:469251-469270 Msa0389910:CDS 40.0%
!! GAAGGCACGATTATCTTTTG+GGG - chr3_2:469285-469304 None:intergenic 40.0%
!! CTGAAGGCACGATTATCTTT+TGG - chr3_2:469287-469306 None:intergenic 40.0%
CAAAAGATAATCGTGCCTTC+AGG + chr3_2:469285-469304 Msa0389910:CDS 40.0%
CAAGTAATGAACTCACCTGA+AGG - chr3_2:469303-469322 None:intergenic 40.0%
CTTCAGGTGAGTTCATTACT+TGG + chr3_2:469301-469320 Msa0389910:intron 40.0%
TGCGGTATCAATCTATGAAG+GGG + chr3_2:469337-469356 Msa0389910:intron 40.0%
GTAATCATAACTGTCGGTGT+CGG - chr3_2:469398-469417 None:intergenic 40.0%
CATATCCGTCATCAAAGTCA+AGG + chr3_2:469642-469661 Msa0389910:CDS 40.0%
GTCATCAAAGTCAAGGACTA+AGG + chr3_2:469649-469668 Msa0389910:CDS 40.0%
CAAAGTCAAGGACTAAGGAT+TGG + chr3_2:469654-469673 Msa0389910:CDS 40.0%
GACTAAGGATTGGGATAAGT+TGG + chr3_2:469664-469683 Msa0389910:CDS 40.0%
GGAAGCTGAAGTGAAAAAAG+AGG + chr3_2:469685-469704 Msa0389910:CDS 40.0%
! TCATGTCCTCATCTGCATTT+TGG - chr3_2:470264-470283 None:intergenic 40.0%
AAAATGCAGATGAGGACATG+AGG + chr3_2:470263-470282 Msa0389910:CDS 40.0%
GAACAGTGCTTTCAACTGAT+TGG + chr3_2:470446-470465 Msa0389910:CDS 40.0%
GAAAGAAGTGGGATCAAAGA+AGG + chr3_2:470468-470487 Msa0389910:CDS 40.0%
CTGTTGTAGTTGCAGTTTCG+AGG + chr3_2:467316-467335 Msa0389910:intron 45.0%
ACAGACGCAGCAGATGATTT+GGG - chr3_2:468069-468088 None:intergenic 45.0%
AACAGACGCAGCAGATGATT+TGG - chr3_2:468070-468089 None:intergenic 45.0%
CTGGTGCAACTGCATTTGTT+TGG - chr3_2:468140-468159 None:intergenic 45.0%
CACCAGTCAGACCAAAATAC+AGG + chr3_2:468154-468173 Msa0389910:CDS 45.0%
AGGGAGACTGAAGGGAAAAA+AGG + chr3_2:468468-468487 Msa0389910:intron 45.0%
GGGAGACTGAAGGGAAAAAA+GGG + chr3_2:468469-468488 Msa0389910:intron 45.0%
TTACCAGAAGCCAGAAGAAG+TGG + chr3_2:468712-468731 Msa0389910:CDS 45.0%
AACAATGGAGAGCAGGTAAG+GGG - chr3_2:468834-468853 None:intergenic 45.0%
GAACAATGGAGAGCAGGTAA+GGG - chr3_2:468835-468854 None:intergenic 45.0%
AGAACAATGGAGAGCAGGTA+AGG - chr3_2:468836-468855 None:intergenic 45.0%
TAAGGAGAACAATGGAGAGC+AGG - chr3_2:468841-468860 None:intergenic 45.0%
ATCTTGGCCAGGAACATCAA+TGG - chr3_2:468948-468967 None:intergenic 45.0%
TAATTGTAGGCATCTTGGCC+AGG - chr3_2:468959-468978 None:intergenic 45.0%
CCTTTCCAAACAATCGAGGT+TGG - chr3_2:468982-469001 None:intergenic 45.0%
CCAACCTCGATTGTTTGGAA+AGG + chr3_2:468979-468998 Msa0389910:CDS 45.0%
ACAGACACAGACACAGACAT+TGG - chr3_2:469473-469492 None:intergenic 45.0%
!!! CAGAATGGTTGCTTTTGCCA+TGG + chr3_2:469510-469529 Msa0389910:intron 45.0%
!! GACTTTGATGACGGATATGC+AGG - chr3_2:469641-469660 None:intergenic 45.0%
GATTCATTGCCAGCAACAAG+TGG + chr3_2:469961-469980 Msa0389910:intron 45.0%
AGAAGTGGGATCAAAGAAGG+TGG + chr3_2:470471-470490 Msa0389910:CDS 45.0%
AAGGCATGGAGGTGAAGAAA+TGG + chr3_2:470509-470528 Msa0389910:CDS 45.0%
AGGCATGGAGGTGAAGAAAT+GGG + chr3_2:470510-470529 Msa0389910:CDS 45.0%
! ATTTGCATTTGCTGGGGAAG+TGG + chr3_2:470677-470696 Msa0389910:three_prime_UTR 45.0%
!! AATAAATAAAAACATAAATA+GGG - chr3_2:469724-469743 None:intergenic 5.0%
!! AAATAAATAAAAACATAAAT+AGG - chr3_2:469725-469744 None:intergenic 5.0%
!!! ATTTATGTTTTTATTTATTT+AGG + chr3_2:469725-469744 Msa0389910:intron 5.0%
!!! TTTATGTTTTTATTTATTTA+GGG + chr3_2:469726-469745 Msa0389910:intron 5.0%
!!! TGTTTTTTATTTTATTTTAT+TGG + chr3_2:470881-470900 Msa0389910:three_prime_UTR 5.0%
TGTCAACGCTTCATTGCTGC+TGG + chr3_2:467113-467132 Msa0389910:CDS 50.0%
!!! GCGATTGGTTTTTAGGGCAC+TGG + chr3_2:467602-467621 Msa0389910:intron 50.0%
ATCAGGCTCGCATATCATGC+AGG - chr3_2:467987-468006 None:intergenic 50.0%
!! CAACCACTTCTTCTGGCTTC+TGG - chr3_2:468718-468737 None:intergenic 50.0%
ACAATGGAGAGCAGGTAAGG+GGG - chr3_2:468833-468852 None:intergenic 50.0%
ATCTATGAAGGGGACACTCC+CGG + chr3_2:469347-469366 Msa0389910:intron 50.0%
!! ATAACTGTCGGTGTCGGACA+CGG - chr3_2:469392-469411 None:intergenic 50.0%
ATTGTGGTGCTCTGCCTTTC+AGG + chr3_2:470180-470199 Msa0389910:intron 50.0%
CTGCGATGTCATGCAGTTCA+AGG - chr3_2:470413-470432 None:intergenic 50.0%
ACATCGCAGCTGGAGTCAAA+TGG + chr3_2:470424-470443 Msa0389910:intron 50.0%
GTGGGATCAAAGAAGGTGGA+AGG + chr3_2:470475-470494 Msa0389910:CDS 50.0%
TTCTTCACCTCCATGCCTTC+CGG - chr3_2:470508-470527 None:intergenic 50.0%
!! GCGAAGAGATTGGCGTTGGT+GGG - chr3_2:466779-466798 None:intergenic 55.0%
ATCGGCGAAGAGATTGGCGT+TGG - chr3_2:466783-466802 None:intergenic 55.0%
TGCTCGATCGGCGAAGAGAT+TGG - chr3_2:466789-466808 None:intergenic 55.0%
! AGTCTGGCGTCCAGGTTTTC+AGG + chr3_2:467352-467371 Msa0389910:intron 55.0%
! GTCTGGCGTCCAGGTTTTCA+GGG + chr3_2:467353-467372 Msa0389910:intron 55.0%
! TTGGTGGTAGGGTGCTCGTA+AGG - chr3_2:468041-468060 None:intergenic 55.0%
ACACCGGGACACACCTAATC+CGG - chr3_2:469369-469388 None:intergenic 55.0%
GAACTGCATGACATCGCAGC+TGG + chr3_2:470414-470433 Msa0389910:intron 55.0%
GAAGGTGGAAGGAAGTCCTC+CGG + chr3_2:470486-470505 Msa0389910:CDS 55.0%
! GGCGAAGAGATTGGCGTTGG+TGG - chr3_2:466780-466799 None:intergenic 60.0%
AGGGTTTCAGTCTGGCGTCC+AGG + chr3_2:467344-467363 Msa0389910:intron 60.0%
GAAGGGGACACTCCCGGATT+AGG + chr3_2:469353-469372 Msa0389910:intron 60.0%
! CTCCCGGATTAGGTGTGTCC+CGG + chr3_2:469363-469382 Msa0389910:intron 60.0%
CACCGGGACACACCTAATCC+GGG - chr3_2:469368-469387 None:intergenic 60.0%
GTGGAAGGAAGTCCTCCGGA+AGG + chr3_2:470490-470509 Msa0389910:CDS 60.0%
AGGAAGTCCTCCGGAAGGCA+TGG + chr3_2:470495-470514 Msa0389910:CDS 60.0%
! AAGTCCTCCGGAAGGCATGG+AGG + chr3_2:470498-470517 Msa0389910:CDS 60.0%
TTCACCTCCATGCCTTCCGG+AGG - chr3_2:470505-470524 None:intergenic 60.0%
!! TCGGTGTCGGACACGGACAC+CGG - chr3_2:469385-469404 None:intergenic 65.0%
! CGGTGTCGGACACGGACACC+GGG - chr3_2:469384-469403 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 466546 471055 466546 ID=Msa0389910;Name=Msa0389910
chr3_2 mRNA 466546 471055 466546 ID=Msa0389910-mRNA-1;Parent=Msa0389910;Name=Msa0389910-mRNA-1;_AED=0.12;_eAED=0.12;_QI=134|1|1|1|0.88|0.8|10|474|367
chr3_2 exon 466546 466909 466546 ID=Msa0389910-mRNA-1:exon:46;Parent=Msa0389910-mRNA-1
chr3_2 exon 467007 467134 467007 ID=Msa0389910-mRNA-1:exon:47;Parent=Msa0389910-mRNA-1
chr3_2 exon 468025 468175 468025 ID=Msa0389910-mRNA-1:exon:48;Parent=Msa0389910-mRNA-1
chr3_2 exon 468703 468799 468703 ID=Msa0389910-mRNA-1:exon:49;Parent=Msa0389910-mRNA-1
chr3_2 exon 468935 469000 468935 ID=Msa0389910-mRNA-1:exon:50;Parent=Msa0389910-mRNA-1
chr3_2 exon 469171 469306 469171 ID=Msa0389910-mRNA-1:exon:51;Parent=Msa0389910-mRNA-1
chr3_2 exon 469624 469706 469624 ID=Msa0389910-mRNA-1:exon:52;Parent=Msa0389910-mRNA-1
chr3_2 exon 470202 470306 470202 ID=Msa0389910-mRNA-1:exon:53;Parent=Msa0389910-mRNA-1
chr3_2 exon 470433 470585 470433 ID=Msa0389910-mRNA-1:exon:54;Parent=Msa0389910-mRNA-1
chr3_2 exon 470627 471055 470627 ID=Msa0389910-mRNA-1:exon:55;Parent=Msa0389910-mRNA-1
chr3_2 five_prime_UTR 466546 466679 466546 ID=Msa0389910-mRNA-1:five_prime_utr;Parent=Msa0389910-mRNA-1
chr3_2 CDS 466680 466909 466680 ID=Msa0389910-mRNA-1:cds;Parent=Msa0389910-mRNA-1
chr3_2 CDS 467007 467134 467007 ID=Msa0389910-mRNA-1:cds;Parent=Msa0389910-mRNA-1
chr3_2 CDS 468025 468175 468025 ID=Msa0389910-mRNA-1:cds;Parent=Msa0389910-mRNA-1
chr3_2 CDS 468703 468799 468703 ID=Msa0389910-mRNA-1:cds;Parent=Msa0389910-mRNA-1
chr3_2 CDS 468935 469000 468935 ID=Msa0389910-mRNA-1:cds;Parent=Msa0389910-mRNA-1
chr3_2 CDS 469171 469306 469171 ID=Msa0389910-mRNA-1:cds;Parent=Msa0389910-mRNA-1
chr3_2 CDS 469624 469706 469624 ID=Msa0389910-mRNA-1:cds;Parent=Msa0389910-mRNA-1
chr3_2 CDS 470202 470306 470202 ID=Msa0389910-mRNA-1:cds;Parent=Msa0389910-mRNA-1
chr3_2 CDS 470433 470540 470433 ID=Msa0389910-mRNA-1:cds;Parent=Msa0389910-mRNA-1
chr3_2 three_prime_UTR 470541 470585 470541 ID=Msa0389910-mRNA-1:three_prime_utr;Parent=Msa0389910-mRNA-1
chr3_2 three_prime_UTR 470627 471055 470627 ID=Msa0389910-mRNA-1:three_prime_utr;Parent=Msa0389910-mRNA-1
Gene Sequence

>Msa0389910

ATGGCTCAAGAACTCGAGAACAAAGCAAAAGAAGCTTTTTTCGACGACGATTTTTCACTCGCCGTTGATTTCTACTCTCAAGCAATCGAAATCGATCCCACCAACGCCAATCTCTTCGCCGATCGAGCACAATCTTATATCAAACTCAACGCTTTCACTGAAGCTGTTTCTGATGCTAATAAGGCCATTCAATTGAACCCTAATTTGTCTAAAGCTTATCTTCGCAAAGGGACTGCTTGTATTAATCTTGAAGAATATCATACTGCTAAGATTGCACTTGAAAAGGGGGCTTCTTTTGCACCTGATGATTCCAGATTCACTAATTTGATTCAACAATGTCAACGCTTCATTGCTGCTGAGGAATCAGAAAGCCTTACGAGCACCCTACCACCAAATGAACCCAAATCATCTGCTGCGTCTGTTAATGATACCCATATGTGTGATAAGAGTGATGAAACATCCAAAGAATCCCAAACAAATGCAGTTGCACCAGTCAGACCAAAATACAGGCATGAATATTACCAGAAGCCAGAAGAAGTGGTTGTGACAATATTTGCAAAAGGGATACCAGCAGAAAATGTTGTTGTGGACTTTGGTGAACAAATTCTGAGTGTTACCATTGATGTTCCTGGCCAAGATGCCTACAATTACCAACCTCGATTGTTTGGAAAGATAATACCTGATAAGTGCAAAGTTGTGGTTTTGTCAACCAAAATTGAAATTCGTCTGGCAAAAGCTGAAGCAATTAATTGGACATCTCTGGAATATAGCAAGGATGTGCTTCCCCAAAAGATAATCGTGCCTTCAGTTCAATCTGAAAGGCCTGCATATCCGTCATCAAAGTCAAGGACTAAGGATTGGGATAAGTTGGAAGCTGAAGTGAAAAAAGAGGAGAAAGAAGAAAAGCTTGATGGTGATGCTGCTTTGAATAAATTGTTCCGTGATATTTACCAAAATGCAGATGAGGACATGAGGAGAGCGATGAGCAAGTCTTTTCTGGAGTCAAATGGAACAGTGCTTTCAACTGATTGGAAAGAAGTGGGATCAAAGAAGGTGGAAGGAAGTCCTCCGGAAGGCATGGAGGTGAAGAAATGGGAGTATTGA

Protein sequence

>Msa0389910

MAQELENKAKEAFFDDDFSLAVDFYSQAIEIDPTNANLFADRAQSYIKLNAFTEAVSDANKAIQLNPNLSKAYLRKGTACINLEEYHTAKIALEKGASFAPDDSRFTNLIQQCQRFIAAEESESLTSTLPPNEPKSSAASVNDTHMCDKSDETSKESQTNAVAPVRPKYRHEYYQKPEEVVVTIFAKGIPAENVVVDFGEQILSVTIDVPGQDAYNYQPRLFGKIIPDKCKVVVLSTKIEIRLAKAEAINWTSLEYSKDVLPQKIIVPSVQSERPAYPSSKSRTKDWDKLEAEVKKEEKEEKLDGDAALNKLFRDIYQNADEDMRRAMSKSFLESNGTVLSTDWKEVGSKKVEGSPPEGMEVKKWEY*