AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1371400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1371400 MtrunA17_Chr3g0138311 98.551 897 4 3 1 888 1 897 0.0 1807
Msa1371400 MtrunA17_Chr1g0148791 83.222 751 99 9 152 888 165 902 0.0 1178
Msa1371400 MtrunA17_Chr1g0171711 56.103 426 162 7 479 888 370 786 9.09e-157 479
Msa1371400 MtrunA17_Chr1g0171711 44.144 333 110 14 1 316 1 274 1.34e-55 206
Msa1371400 MtrunA17_Chr7g0237271 51.300 423 176 9 482 888 376 784 1.03e-134 421
Msa1371400 MtrunA17_Chr7g0237271 45.646 333 99 10 2 314 8 278 1.02e-61 224
Msa1371400 MtrunA17_Chr4g0062881 48.235 425 174 10 474 888 69 457 1.75e-117 365
Msa1371400 MtrunA17_Chr2g0282401 47.463 335 155 5 573 888 456 788 1.33e-93 312
Msa1371400 MtrunA17_Chr4g0047051 40.146 274 154 4 624 888 36 308 1.01e-58 203
Msa1371400 MtrunA17_Chr4g0047071 39.576 283 150 8 624 888 3 282 6.99e-56 194
Msa1371400 MtrunA17_Chr7g0237241 41.954 348 109 10 2 334 8 277 6.93e-54 201
Msa1371400 MtrunA17_Chr4g0047091 37.102 283 166 6 616 888 86 366 7.13e-50 180
Msa1371400 MtrunA17_Chr4g0047061 39.764 254 141 6 644 888 80 330 1.99e-48 175
Msa1371400 MtrunA17_Chr4g0047101 39.823 226 119 5 615 835 23 236 1.95e-38 144
Msa1371400 MtrunA17_Chr4g0062891 33.186 226 106 5 12 232 22 207 3.85e-28 112
Msa1371400 MtrunA17_Chr4g0047111 38.732 142 62 3 702 841 7 125 1.99e-24 100
Msa1371400 MtrunA17_Chr5g0405851 26.205 332 203 11 591 887 125 449 1.07e-21 99.4
Msa1371400 MtrunA17_Chr1g0172501 26.014 296 198 9 606 887 264 552 1.38e-20 96.7
Msa1371400 MtrunA17_Chr3g0093681 25.850 294 197 9 608 887 266 552 9.21e-20 94.4
Msa1371400 MtrunA17_Chr6g0448921 29.185 233 155 8 616 841 14 243 1.99e-18 90.5
Msa1371400 MtrunA17_Chr1g0163021 67.857 56 12 2 792 841 25 80 2.57e-17 78.6
Msa1371400 MtrunA17_Chr1g0185501 28.364 275 153 14 621 887 30 268 6.70e-17 82.8
Msa1371400 MtrunA17_Chr1g0185501 23.585 212 150 6 611 812 104 313 1.86e-11 66.2
Msa1371400 MtrunA17_Chr3g0136971 29.146 199 133 6 618 811 419 614 3.52e-16 83.2
Msa1371400 MtrunA17_Chr3g0136971 33.553 152 96 3 626 774 469 618 3.31e-15 80.1
Msa1371400 MtrunA17_Chr3g0136971 25.714 280 178 11 621 887 352 614 6.87e-11 66.2
Msa1371400 MtrunA17_Chr2g0281451 26.068 234 163 8 616 842 13 243 1.56e-15 81.6
Msa1371400 MtrunA17_Chr2g0281451 24.155 207 145 5 693 887 5 211 1.19e-11 68.9
Msa1371400 MtrunA17_Chr4g0053651 23.585 318 199 12 609 887 221 533 1.85e-15 80.5
Msa1371400 MtrunA17_Chr5g0401661 21.981 323 206 11 606 887 323 640 1.11e-14 78.6
Msa1371400 MtrunA17_Chr5g0401661 25.769 260 137 9 626 831 404 661 1.73e-13 74.7
Msa1371400 MtrunA17_Chr1g0168391 28.877 187 127 4 632 813 238 423 1.50e-14 77.4
Msa1371400 MtrunA17_Chr2g0331981 24.000 200 130 4 626 811 65 256 1.66e-14 78.2
Msa1371400 MtrunA17_Chr4g0004241 24.500 200 129 4 626 811 65 256 1.67e-14 78.2
Msa1371400 MtrunA17_Chr4g0067151 28.054 221 146 7 626 836 86 303 6.46e-14 73.9
Msa1371400 MtrunA17_Chr4g0067151 24.891 229 157 7 594 812 99 322 1.83e-13 72.8
Msa1371400 MtrunA17_Chr4g0067151 28.906 256 157 10 656 887 23 277 2.20e-13 72.4
Msa1371400 MtrunA17_Chr5g0401671 21.562 320 209 10 606 887 235 550 7.09e-14 75.5
Msa1371400 MtrunA17_Chr5g0401671 28.324 173 111 4 611 772 423 593 3.79e-12 70.1
Msa1371400 MtrunA17_Chr4g0030281 58.824 68 1 1 658 725 593 633 1.11e-13 75.1
Msa1371400 MtrunA17_Chr1g0200901 26.367 311 207 8 590 886 98 400 1.55e-13 73.6
Msa1371400 MtrunA17_Chr1g0197551 28.421 190 121 5 625 813 58 233 3.20e-13 73.9
Msa1371400 MtrunA17_Chr8g0352821 24.211 285 178 7 606 887 215 464 1.72e-12 71.2
Msa1371400 MtrunA17_Chr7g0253861 22.569 288 202 8 619 886 56 342 2.63e-12 69.3
Msa1371400 MtrunA17_Chr2g0331961 21.951 205 154 3 613 811 54 258 5.25e-12 68.2
Msa1371400 MtrunA17_Chr8g0392701 26.295 251 146 12 632 855 30 268 5.85e-12 68.2
Msa1371400 MtrunA17_Chr4g0035611 22.932 266 154 6 625 887 58 275 7.66e-12 69.7
Msa1371400 MtrunA17_Chr4g0059031 33.333 108 70 2 632 739 514 619 7.99e-12 69.3
Msa1371400 MtrunA17_Chr4g0059031 25.258 194 129 5 632 811 462 653 1.88e-11 68.2
Msa1371400 MtrunA17_Chr4g0034491 25.652 230 146 8 675 888 34 254 1.06e-11 68.9
Msa1371400 MtrunA17_Chr4g0070791 27.459 244 144 11 673 887 31 270 2.45e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1371400 AT4G32551.1 72.164 758 178 8 152 888 186 931 0.0 1046
Msa1371400 AT4G32551.2 68.844 796 177 9 152 888 186 969 0.0 1030
Msa1371400 AT2G32700.2 54.225 426 169 9 479 888 372 787 7.10e-150 461
Msa1371400 AT2G32700.2 43.544 333 111 12 1 315 1 274 2.09e-52 197
Msa1371400 AT2G32700.5 54.225 426 169 9 479 888 372 787 7.10e-150 461
Msa1371400 AT2G32700.5 43.544 333 111 12 1 315 1 274 2.09e-52 197
Msa1371400 AT2G32700.1 54.225 426 169 9 479 888 372 787 7.10e-150 461
Msa1371400 AT2G32700.1 43.544 333 111 12 1 315 1 274 2.09e-52 197
Msa1371400 AT2G32700.4 54.225 426 169 9 479 888 372 787 7.10e-150 461
Msa1371400 AT2G32700.4 43.544 333 111 12 1 315 1 274 2.09e-52 197
Msa1371400 AT2G32700.3 54.225 426 169 9 479 888 372 787 7.10e-150 461
Msa1371400 AT2G32700.3 43.544 333 111 12 1 315 1 274 2.09e-52 197
Msa1371400 AT2G32700.7 54.225 426 169 9 479 888 391 806 1.34e-149 461
Msa1371400 AT2G32700.7 40.909 352 112 12 1 315 1 293 4.20e-50 190
Msa1371400 AT2G32700.6 53.991 426 168 9 479 888 372 785 8.02e-149 458
Msa1371400 AT2G32700.6 43.544 333 111 12 1 315 1 274 1.90e-52 197
Msa1371400 AT2G41500.1 27.338 278 185 7 624 887 261 535 5.42e-22 101
Msa1371400 AT2G41500.1 26.368 201 141 5 620 815 341 539 3.80e-12 70.5
Msa1371400 AT2G41500.2 27.338 278 185 7 624 887 261 535 5.42e-22 101
Msa1371400 AT2G41500.2 26.368 201 141 5 620 815 341 539 3.80e-12 70.5
Msa1371400 AT4G02730.1 27.986 293 158 9 608 887 33 285 1.60e-20 94.4
Msa1371400 AT5G23430.1 31.220 205 132 7 616 814 14 215 1.63e-19 94.7
Msa1371400 AT5G23430.3 31.220 205 132 7 616 814 14 215 1.66e-19 94.7
Msa1371400 AT5G23430.2 31.220 205 132 7 616 814 14 215 1.66e-19 94.7
Msa1371400 AT5G08390.1 30.244 205 134 7 616 814 14 215 4.21e-19 93.2
Msa1371400 AT5G08390.1 23.305 236 136 9 659 887 15 212 2.02e-11 68.6
Msa1371400 AT1G61210.1 26.432 227 157 8 616 835 13 236 2.96e-17 87.8
Msa1371400 AT1G61210.1 24.167 240 167 7 602 832 81 314 7.07e-12 70.1
Msa1371400 AT1G61210.1 24.155 207 145 5 693 887 5 211 5.78e-11 67.0
Msa1371400 AT1G61210.2 26.432 227 157 8 616 835 13 236 3.54e-17 87.4
Msa1371400 AT1G61210.2 24.167 240 167 7 602 832 81 314 8.03e-12 70.1
Msa1371400 AT1G61210.2 24.155 207 145 5 693 887 5 211 6.96e-11 67.0
Msa1371400 AT1G61210.3 26.432 227 157 8 616 835 13 236 4.93e-17 87.0
Msa1371400 AT1G61210.3 24.167 240 167 7 602 832 81 314 9.63e-12 69.7
Msa1371400 AT1G61210.3 24.155 207 145 5 693 887 5 211 7.95e-11 66.6
Msa1371400 AT2G33340.3 31.414 191 119 6 632 813 236 423 1.11e-16 84.3
Msa1371400 AT2G33340.2 31.414 191 119 6 632 813 236 423 1.12e-16 84.7
Msa1371400 AT2G33340.1 31.414 191 119 6 632 813 236 423 1.12e-16 84.7
Msa1371400 AT1G11160.1 25.551 227 159 8 616 835 13 236 8.52e-16 82.8
Msa1371400 AT1G11160.1 24.638 207 144 5 693 887 5 211 3.85e-11 67.8
Msa1371400 AT1G11160.2 25.551 227 159 8 616 835 13 236 1.06e-15 82.4
Msa1371400 AT1G11160.2 24.638 207 144 5 693 887 5 211 4.64e-11 67.4
Msa1371400 AT1G11160.4 25.551 227 159 8 616 835 13 236 1.26e-15 82.4
Msa1371400 AT1G11160.4 24.638 207 144 5 693 887 5 211 5.02e-11 67.4
Msa1371400 AT2G43770.1 23.264 288 200 8 619 886 54 340 1.40e-15 79.7
Msa1371400 AT5G25150.1 29.319 191 127 6 626 811 426 613 1.97e-15 81.3
Msa1371400 AT3G49660.1 25.461 271 156 8 626 887 79 312 2.01e-15 79.0
Msa1371400 AT3G49660.1 27.228 202 137 6 623 816 118 317 9.57e-13 70.9
Msa1371400 AT5G25150.2 29.319 191 127 6 626 811 426 613 2.51e-15 80.9
Msa1371400 AT5G67320.1 25.538 325 184 9 609 887 256 568 8.61e-15 79.0
Msa1371400 AT3G15980.1 25.389 193 122 4 633 811 72 256 1.02e-14 79.3
Msa1371400 AT3G15980.3 25.389 193 122 4 633 811 72 256 1.13e-14 79.0
Msa1371400 AT3G15980.6 25.389 193 122 4 633 811 72 256 1.13e-14 79.0
Msa1371400 AT3G15980.2 25.389 193 122 4 633 811 72 256 1.13e-14 79.0
Msa1371400 AT3G15980.4 25.389 193 122 4 633 811 72 256 1.13e-14 79.0
Msa1371400 AT3G15980.5 25.389 193 122 4 633 811 72 256 1.15e-14 79.0
Msa1371400 AT3G15980.7 25.389 193 122 4 633 811 72 256 1.16e-14 79.0
Msa1371400 AT1G52360.4 24.500 200 129 4 626 811 65 256 1.46e-14 78.6
Msa1371400 AT1G52360.1 24.500 200 129 4 626 811 65 256 1.46e-14 78.6
Msa1371400 AT1G52360.3 24.500 200 129 4 626 811 65 256 1.58e-14 78.6
Msa1371400 AT1G52360.2 24.500 200 129 4 626 811 109 300 2.24e-14 78.2
Msa1371400 AT1G04510.2 29.474 190 125 5 632 813 236 424 5.47e-14 76.3
Msa1371400 AT1G04510.1 29.474 190 125 5 632 813 236 424 5.82e-14 76.3
Msa1371400 AT5G13480.3 24.476 286 176 7 606 887 143 392 1.33e-13 75.1
Msa1371400 AT5G13480.4 24.476 286 176 7 606 887 143 392 1.33e-13 75.1
Msa1371400 AT5G13480.1 24.476 286 176 7 606 887 155 404 1.48e-13 75.1
Msa1371400 AT5G13480.2 24.476 286 176 7 606 887 166 415 2.62e-13 74.3
Msa1371400 AT1G79990.2 22.791 215 144 4 611 811 50 256 4.13e-13 73.9
Msa1371400 AT1G79990.1 22.791 215 144 4 611 811 50 256 4.41e-13 73.9
Msa1371400 AT2G21390.1 24.627 268 149 8 624 887 57 275 8.02e-13 73.2
Msa1371400 AT1G18080.1 27.236 246 151 13 632 855 30 269 1.00e-12 70.9
Msa1371400 AT1G71840.1 24.561 285 196 7 621 888 116 398 1.17e-12 71.2
Msa1371400 AT1G62020.1 23.221 267 154 6 624 887 57 275 1.26e-12 72.8
Msa1371400 AT4G15900.1 23.529 255 179 8 645 887 162 412 6.32e-12 69.3
Msa1371400 AT5G16750.1 33.333 108 70 2 632 739 513 618 7.71e-12 69.7
Msa1371400 AT5G16750.1 27.000 200 134 6 612 802 54 250 8.20e-11 66.6
Msa1371400 AT3G18130.1 26.316 247 151 13 632 855 30 268 3.11e-11 66.2
Msa1371400 AT3G15354.4 25.514 243 161 7 617 845 283 519 7.51e-11 66.2
Msa1371400 AT3G15354.5 25.514 243 161 7 617 845 283 519 7.51e-11 66.2

Find 224 sgRNAs with CRISPR-Local

Find 486 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATAAGATCATCTTTATT+TGG 0.065820 tig0019197:-158456 None:intergenic
GGATCATTGTTAGGAATTTC+TGG 0.201289 tig0019197:+154452 Msa1371400:CDS
GCAGCTGGTGGTCAGCCTTC+AGG 0.211841 tig0019197:+153967 Msa1371400:CDS
TTCAATATTGAGGCATGATT+TGG 0.222066 tig0019197:-153937 None:intergenic
ACCCACCGCCTCCACTCTTT+TGG 0.240322 tig0019197:+159538 Msa1371400:three_prime_UTR
CAACCATGTCTCAAACTAAC+TGG 0.250472 tig0019197:+152365 Msa1371400:exon
TTGAAAGGCCATCCTTATTT+AGG 0.266930 tig0019197:-154961 None:intergenic
CAGCTGGTGGTCAGCCTTCA+GGG 0.269946 tig0019197:+153968 Msa1371400:CDS
CTTCTGAATAATAGGAATAT+TGG 0.288773 tig0019197:+154938 Msa1371400:CDS
CTCTTAAATGGTAGCGCAAA+TGG 0.294488 tig0019197:+153684 Msa1371400:CDS
TTGGCGGTTTCAACTGTAAA+TGG 0.301887 tig0019197:+159351 Msa1371400:CDS
TGAGAATGCTTCTGAATAAT+AGG 0.303232 tig0019197:+154930 Msa1371400:CDS
ATGTAATGCAGGCTGTTATA+TGG 0.307030 tig0019197:+157507 Msa1371400:intron
GGCTGAGGAGCCTGCATATA+AGG 0.310194 tig0019197:-154806 None:intergenic
GATAGGGCTCATCTCTTAAA+TGG 0.312174 tig0019197:+153672 Msa1371400:CDS
GTTTGAGACATGGTTGAAAA+AGG 0.313668 tig0019197:-152358 None:intergenic
TAGGAATATTGGCCTAAATA+AGG 0.314773 tig0019197:+154949 Msa1371400:CDS
TCGACAAAACTGTCAGGGTT+TGG 0.315809 tig0019197:+157633 Msa1371400:CDS
GCCGTTCCTGAACTATTTGC+AGG 0.317851 tig0019197:-156201 None:intergenic
CAAAGTTCGAATATTGTATA+TGG 0.321094 tig0019197:-159679 None:intergenic
CGACAAAACTGTCAGGGTTT+GGG 0.331128 tig0019197:+157634 Msa1371400:CDS
TCCTTCAGGACCCGCAGCTC+TGG 0.334645 tig0019197:-154432 None:intergenic
ATATAAGATCATCTTTATTT+GGG 0.338718 tig0019197:-158455 None:intergenic
GCTTTCTCTTTCTTCCCATC+TGG 0.344539 tig0019197:-156158 None:intergenic
TTTGTATGTGTAGTTGAAAC+TGG 0.360749 tig0019197:+155210 Msa1371400:intron
GCTATTGCATTAGCAGTTGC+CGG 0.366121 tig0019197:-153720 None:intergenic
GTGAGGACTCTGTCAGGATT+TGG 0.366793 tig0019197:+159031 Msa1371400:CDS
GGCATGCCGATATTCATTAA+AGG 0.372801 tig0019197:+158791 Msa1371400:CDS
ATGTATGAGGAAAGGTTAAA+AGG 0.381721 tig0019197:+153750 Msa1371400:CDS
GGATCCATCGGGAGAATTGC+TGG 0.381986 tig0019197:+158999 Msa1371400:CDS
TCGGGTCCTGCAAATAGTTC+AGG 0.382571 tig0019197:+156195 Msa1371400:CDS
GCAGAAGTAGATGAAGAGTT+TGG 0.385208 tig0019197:-152289 None:intergenic
GACGAGGTTGAAATCTCATC+TGG 0.387712 tig0019197:-158707 None:intergenic
GTATGAGTTGAGGGAGTTGA+GGG 0.393882 tig0019197:-156255 None:intergenic
CCCTCTTAACAAGGTAATCA+TGG 0.394159 tig0019197:-152716 None:intergenic
GACAATAGATTCTGTATGTT+GGG 0.395558 tig0019197:+158978 Msa1371400:CDS
AAGTGGTGGCCATGACAAAA+AGG 0.396352 tig0019197:+157323 Msa1371400:CDS
AAAGCAACCGGTATCTTCTT+CGG 0.398253 tig0019197:+156176 Msa1371400:CDS
ATTCCTAACAATGATCCTTC+AGG 0.412068 tig0019197:-154446 None:intergenic
AACAACAATTTGACTTTGAA+AGG 0.413556 tig0019197:+154601 Msa1371400:CDS
GGCTGCTGCGGCTGCGATTG+TGG 0.414076 tig0019197:-153624 None:intergenic
AACAACAGCAAAATAGAGAT+AGG 0.415075 tig0019197:+153655 Msa1371400:CDS
AGTATGAGTTGAGGGAGTTG+AGG 0.417532 tig0019197:-156256 None:intergenic
CAGTTGTGTTAGAGTCTCTA+AGG 0.417904 tig0019197:+158527 Msa1371400:CDS
AAGCAACCGGTATCTTCTTC+GGG 0.418059 tig0019197:+156177 Msa1371400:CDS
TCCATGATTACCTTGTTAAG+AGG 0.419410 tig0019197:+152715 Msa1371400:CDS
GAGAGGTAAAAGAGAAATGA+AGG 0.428697 tig0019197:-152214 None:intergenic
TCAGTGCTAAACATCATTAG+AGG 0.437472 tig0019197:-156333 None:intergenic
CAACTCACCAACTGGTTTGA+AGG 0.438265 tig0019197:-156378 None:intergenic
TGATGGTTTAATTACTGCCT+TGG 0.438872 tig0019197:+159332 Msa1371400:CDS
ACGACAAGTTCATCAAGCTT+TGG 0.441767 tig0019197:+159394 Msa1371400:CDS
CACCTCCGAGTGCTTCTCAT+TGG 0.442657 tig0019197:-153007 None:intergenic
GTCAGGATTTGGACTCTTGA+AGG 0.442934 tig0019197:+159042 Msa1371400:CDS
TCAATATTGAGGCATGATTT+GGG 0.442975 tig0019197:-153936 None:intergenic
TGAGAACATGGGTCAGCTCT+TGG 0.447717 tig0019197:+153912 Msa1371400:CDS
TTTGAAGAACTACTATTATG+AGG 0.452165 tig0019197:-156309 None:intergenic
GGTCCTGAAGGATCATTGTT+AGG 0.452925 tig0019197:+154443 Msa1371400:CDS
TAGTTCAGGAACGGCAAATA+CGG 0.454165 tig0019197:+156209 Msa1371400:CDS
TCTGTATCTCCACGGGGAAA+AGG 0.460444 tig0019197:-155040 None:intergenic
ATCAGATGAGAAATGGCAAC+AGG 0.462338 tig0019197:-157286 None:intergenic
TGGTTTAATTACTGCCTTGG+CGG 0.462707 tig0019197:+159335 Msa1371400:CDS
TTCTGTATGTTGGGATCCAT+CGG 0.462819 tig0019197:+158987 Msa1371400:CDS
CTGCCAGTGAAGAAAGTAGA+AGG 0.462904 tig0019197:+154906 Msa1371400:CDS
CAGCCTTCTACTTTCTTCAC+TGG 0.466524 tig0019197:-154909 None:intergenic
AGACAATAGATTCTGTATGT+TGG 0.466596 tig0019197:+158977 Msa1371400:CDS
AATGTTGGATCACCTCTTCA+TGG 0.466607 tig0019197:+155007 Msa1371400:CDS
GGTAGCGCAAATGGGTTAGC+TGG 0.466716 tig0019197:+153693 Msa1371400:CDS
TGCTGTGACTGCTGAGGTTG+AGG 0.471903 tig0019197:-153510 None:intergenic
TTTGTGCCAGGATCAAATCA+AGG 0.472333 tig0019197:+154577 Msa1371400:intron
CTGTGAGTGAGGACTCTGTC+AGG 0.473083 tig0019197:+159025 Msa1371400:CDS
CTTCATTCGACAAAACTGTC+AGG 0.474156 tig0019197:+157627 Msa1371400:CDS
GCAGCTCTGGGATTTAAAAC+CGG 0.474188 tig0019197:-154419 None:intergenic
TGATAAGGATCTTGAATTGA+AGG 0.475846 tig0019197:+156484 Msa1371400:CDS
CTTGATGAACTTGTCGTGAC+TGG 0.476097 tig0019197:-159388 None:intergenic
TGTTGCCATTTCTCATCTGA+TGG 0.476232 tig0019197:+157288 Msa1371400:CDS
CTACTTTCTTCACTGGCAGA+TGG 0.477409 tig0019197:-154902 None:intergenic
AGATCCTGTTGGCCGTTGTA+TGG 0.479819 tig0019197:+156589 Msa1371400:CDS
CCTTCAGGACCCGCAGCTCT+GGG 0.479942 tig0019197:-154431 None:intergenic
GCTCGTAGTCAGCAACTACC+AGG 0.480624 tig0019197:+154282 Msa1371400:CDS
GTTCATGAGCTTAGCTGTAA+TGG 0.482292 tig0019197:+159072 Msa1371400:CDS
ATTGCAGCTATTGATGCTCC+TGG 0.482548 tig0019197:+152931 Msa1371400:intron
GGTTTGGAGCAACTTCGCTC+TGG 0.483401 tig0019197:+154764 Msa1371400:CDS
GGCTGATGTGGATCGCTTTG+TGG 0.483591 tig0019197:+156505 Msa1371400:CDS
AATTAATCCAAGCTGAGTTC+AGG 0.485969 tig0019197:+159611 Msa1371400:three_prime_UTR
CTACTATTATGAGGCAAAGC+AGG 0.494245 tig0019197:-156300 None:intergenic
TCAGGATTTGGACTCTTGAA+GGG 0.495748 tig0019197:+159043 Msa1371400:CDS
TTTGGATGACGCAGCAATGA+AGG 0.495789 tig0019197:+153791 Msa1371400:CDS
ACATCCATACAACGGCCAAC+AGG 0.497907 tig0019197:-156593 None:intergenic
GCAGCAAAAGCCTTATATGC+AGG 0.497961 tig0019197:+154796 Msa1371400:CDS
AGGATGGCCTTTCAAACCCT+GGG 0.498402 tig0019197:+154969 Msa1371400:CDS
CTAATGATGTTTAGCACTGA+TGG 0.498844 tig0019197:+156336 Msa1371400:CDS
CATAAAGAGTGAGATAAATC+CGG 0.499438 tig0019197:+154400 Msa1371400:CDS
TATGCTGTACAGCAAAGATT+TGG 0.504149 tig0019197:+153889 Msa1371400:intron
TCTCCAGGAGTATGAGTTGA+GGG 0.506142 tig0019197:-156264 None:intergenic
ATGACTTTGTCTGCTCATGA+TGG 0.507469 tig0019197:+159315 Msa1371400:CDS
TAGCATATCTGTATCTCCAC+GGG 0.507683 tig0019197:-155047 None:intergenic
CTTTGGAAGTAACTAACATA+AGG 0.508508 tig0019197:+159411 Msa1371400:exon
CCATGATTACCTTGTTAAGA+GGG 0.510376 tig0019197:+152716 Msa1371400:CDS
ACAACAATTTGACTTTGAAA+GGG 0.512235 tig0019197:+154602 Msa1371400:CDS
GGATCACCTCTTCATGGCGG+TGG 0.513287 tig0019197:+155013 Msa1371400:CDS
GCAAAGATTTGGTGAGAACA+TGG 0.513679 tig0019197:+153900 Msa1371400:intron
GTCCAAAAGAGTGGAGGCGG+TGG 0.515293 tig0019197:-159540 None:intergenic
CTCATATCGAGGAAATGATC+AGG 0.515609 tig0019197:+155420 Msa1371400:CDS
GGCATTGAAACAGCATCTCC+AGG 0.515902 tig0019197:-156279 None:intergenic
GTGGCATGCTTGCACTGAAA+CGG 0.517376 tig0019197:-157592 None:intergenic
CAACCAATGACGAGCAGTGA+AGG 0.518554 tig0019197:-159132 None:intergenic
GGGAAGAAAGAGAAAGCAAC+CGG 0.518811 tig0019197:+156164 Msa1371400:CDS
AATAGCAACAAAGATGTATG+AGG 0.521157 tig0019197:+153737 Msa1371400:CDS
TCTTAAATGGTAGCGCAAAT+GGG 0.525075 tig0019197:+153685 Msa1371400:CDS
ACTCCCTCAACTCATACTCC+TGG 0.525867 tig0019197:+156261 Msa1371400:CDS
TGCACCAGCAAGATAAGGTA+GGG 0.526080 tig0019197:+155356 Msa1371400:CDS
ACAATACTCGCGATACAGTC+AGG 0.527168 tig0019197:+159452 Msa1371400:three_prime_UTR
AACATTTGTAGTTGATGAAA+CGG 0.527598 tig0019197:-154827 None:intergenic
ATGAGATTTCAACCTCGTCT+AGG 0.533516 tig0019197:+158711 Msa1371400:CDS
CTTTCAAATCCCTCTTAACA+AGG 0.536686 tig0019197:-152725 None:intergenic
ATGTTTAGCACTGATGGTAC+TGG 0.538876 tig0019197:+156342 Msa1371400:CDS
ATATTGAAGTCAGCTGCAGC+TGG 0.539698 tig0019197:+153952 Msa1371400:CDS
CCCAGAGCTGCGGGTCCTGA+AGG 0.540779 tig0019197:+154431 Msa1371400:CDS
CTATTGCATTAGCAGTTGCC+GGG 0.541486 tig0019197:-153719 None:intergenic
CATCGTGTCTATACTTGATG+TGG 0.541488 tig0019197:+158761 Msa1371400:CDS
CAATGAGAAGCACTCGGAGG+TGG 0.544235 tig0019197:+153008 Msa1371400:CDS
AAGGATGGCCTTTCAAACCC+TGG 0.546368 tig0019197:+154968 Msa1371400:CDS
TCAGGAACGGCAAATACGGC+AGG 0.546613 tig0019197:+156213 Msa1371400:CDS
TGCAGCTGACTTCAATATTG+AGG 0.547077 tig0019197:-153947 None:intergenic
GTGTAGAAGGTGTTGGATGA+TGG 0.547218 tig0019197:-152330 None:intergenic
TGAGATTTCAACCTCGTCTA+GGG 0.547964 tig0019197:+158712 Msa1371400:CDS
GCAGGACCCGAAGAAGATAC+CGG 0.549009 tig0019197:-156183 None:intergenic
CAACGGCCAACAGGATCTCT+AGG 0.552220 tig0019197:-156584 None:intergenic
TTCATTCGACAAAACTGTCA+GGG 0.553440 tig0019197:+157628 Msa1371400:CDS
GTGGATCGCTTTGTGGACGA+TGG 0.553830 tig0019197:+156512 Msa1371400:CDS
TATGCAGACTCAATTAATCA+AGG 0.554395 tig0019197:+153449 Msa1371400:intron
TACATCACCTTCAAACCAGT+TGG 0.556639 tig0019197:+156371 Msa1371400:CDS
GGTGGCTGCATCATATATAG+AGG 0.557327 tig0019197:+153026 Msa1371400:CDS
ACGAGCAGTGAAGGGAATGT+TGG 0.559129 tig0019197:-159123 None:intergenic
ATGAGTTGAGGGAGTTGAGG+GGG 0.560911 tig0019197:-156253 None:intergenic
TAGCATGCACCAGCAAGATA+AGG 0.561666 tig0019197:+155351 Msa1371400:CDS
TGCGCATGCTGTGACTGCTG+AGG 0.561774 tig0019197:-153516 None:intergenic
AGGTGGTGGTAGTGTCACCA+TGG 0.562183 tig0019197:+155381 Msa1371400:CDS
GTATCGCGAGTATTGTCAAT+CGG 0.564534 tig0019197:-159445 None:intergenic
ACAATTTGACTTTGAAAGGG+TGG 0.565454 tig0019197:+154605 Msa1371400:CDS
AAGTCTACCTGAACTCAGCT+TGG 0.565977 tig0019197:-159618 None:intergenic
AACCAATGACGAGCAGTGAA+GGG 0.566783 tig0019197:-159131 None:intergenic
AAAGTATCATCTGACCCTGT+TGG 0.567966 tig0019197:+152777 Msa1371400:CDS
GTCATTGGAGCTGTGGAACA+TGG 0.570092 tig0019197:+159278 Msa1371400:intron
CATCCAAAGAATCCCTCTGT+GGG 0.570844 tig0019197:-153776 None:intergenic
TTGTGCCAGGATCAAATCAA+GGG 0.571058 tig0019197:+154578 Msa1371400:intron
TATGAGTTGAGGGAGTTGAG+GGG 0.574119 tig0019197:-156254 None:intergenic
TCTTGAATTGAAGGCTGATG+TGG 0.574684 tig0019197:+156493 Msa1371400:CDS
GGAGGGCCACCGCCATGAAG+AGG 0.575836 tig0019197:-155019 None:intergenic
AAATGGGTTAGCTGGAAACC+CGG 0.578315 tig0019197:+153701 Msa1371400:CDS
GTATCTCCACGGGGAAAAGG+AGG 0.581599 tig0019197:-155037 None:intergenic
AACGTTGCATTACATTACAT+AGG 0.582212 tig0019197:-159566 None:intergenic
CAACAAAGATGTATGAGGAA+AGG 0.582289 tig0019197:+153742 Msa1371400:CDS
ATGCACCAGCAAGATAAGGT+AGG 0.584371 tig0019197:+155355 Msa1371400:CDS
ACAACAGCAAAATAGAGATA+GGG 0.585250 tig0019197:+153656 Msa1371400:CDS
TCTGTATGTTGGGATCCATC+GGG 0.588620 tig0019197:+158988 Msa1371400:CDS
GACTCAATTAATCAAGGCAA+GGG 0.589226 tig0019197:+153455 Msa1371400:intron
AAATGATCACGTACTGTGAG+TGG 0.589381 tig0019197:-154628 None:intergenic
AGATACAGATATGCTAATGA+AGG 0.589638 tig0019197:+155054 Msa1371400:CDS
AATATTGGCCTAAATAAGGA+TGG 0.589670 tig0019197:+154953 Msa1371400:CDS
GGTGACATGTTATCGAATGT+TGG 0.590892 tig0019197:+154992 Msa1371400:CDS
TGTAGTTGATGAAACGGCTG+AGG 0.591774 tig0019197:-154821 None:intergenic
CAGGATTTGGACTCTTGAAG+GGG 0.592600 tig0019197:+159044 Msa1371400:CDS
GCAGTGAAGGGAATGTTGGA+TGG 0.593172 tig0019197:-159119 None:intergenic
GGTGGTAGTGTCACCATGGA+TGG 0.593565 tig0019197:+155385 Msa1371400:CDS
ATCTCCAGGAGTATGAGTTG+AGG 0.594181 tig0019197:-156265 None:intergenic
CACTCAAACAGAAAACCTCC+AGG 0.595072 tig0019197:-152949 None:intergenic
TCCTGCAAATAGTTCAGGAA+CGG 0.598491 tig0019197:+156200 Msa1371400:CDS
TGGATCGCTTTGTGGACGAT+GGG 0.599275 tig0019197:+156513 Msa1371400:CDS
TTCCCAGTTAGTTTGAGACA+TGG 0.601725 tig0019197:-152368 None:intergenic
AACCATGTCTCAAACTAACT+GGG 0.603782 tig0019197:+152366 Msa1371400:exon
GTTTGACATGCTGCCATCCA+TGG 0.604630 tig0019197:-155398 None:intergenic
TTAGTCCAAAAGAGTGGAGG+CGG 0.605487 tig0019197:-159543 None:intergenic
AGACTCAATTAATCAAGGCA+AGG 0.605620 tig0019197:+153454 Msa1371400:intron
TTAGCATATCTGTATCTCCA+CGG 0.610660 tig0019197:-155048 None:intergenic
ATATGTTCGTGTGATGGTGA+TGG 0.610859 tig0019197:+158474 Msa1371400:CDS
TGACTACGAGCTTGAACTTG+TGG 0.613035 tig0019197:-154270 None:intergenic
GGTGACCGTGTAGAAGGTGT+TGG 0.613103 tig0019197:-152337 None:intergenic
GATGCCAGCAATTCTCCCGA+TGG 0.613289 tig0019197:-159003 None:intergenic
CATAGGTTAGTCCAAAAGAG+TGG 0.615725 tig0019197:-159549 None:intergenic
TTGAAGTCAGCTGCAGCTGG+TGG 0.619431 tig0019197:+153955 Msa1371400:CDS
GATCTTATATGTTCGTGTGA+TGG 0.621408 tig0019197:+158468 Msa1371400:CDS
ACGAGGTTGAAATCTCATCT+GGG 0.623795 tig0019197:-158706 None:intergenic
GCAGCTATTGATGCTCCTGG+AGG 0.625054 tig0019197:+152934 Msa1371400:intron
TTGTGTAGTCATTGGAGCTG+TGG 0.626523 tig0019197:+159271 Msa1371400:intron
TGTTGTGGTTGTGGCTGCTG+CGG 0.628420 tig0019197:-153636 None:intergenic
ATCATCCAACACCTTCTACA+CGG 0.632839 tig0019197:+152332 Msa1371400:five_prime_UTR
ATAAGCTGTTGCTGATGCTG+TGG 0.633531 tig0019197:-154854 None:intergenic
GTGATGGTGAGATACGGTAT+TGG 0.634594 tig0019197:+158490 Msa1371400:CDS
TATACTTGATGTGGAAACAC+AGG 0.635213 tig0019197:+158770 Msa1371400:CDS
TCCAAAAGAGTGGAGGCGGT+GGG 0.635542 tig0019197:-159539 None:intergenic
GCACCAGCAAGATAAGGTAG+GGG 0.636793 tig0019197:+155357 Msa1371400:CDS
CAAAGATTTGGTGAGAACAT+GGG 0.639604 tig0019197:+153901 Msa1371400:CDS
ATTGCTGGCATCTGTGAGTG+AGG 0.640756 tig0019197:+159014 Msa1371400:CDS
TATCTCCACGGGGAAAAGGA+GGG 0.641303 tig0019197:-155036 None:intergenic
TCCAAAGAATCCCTCTGTGG+GGG 0.642699 tig0019197:-153774 None:intergenic
AATGAAGATGTTGCTAGACG+TGG 0.645026 tig0019197:-157611 None:intergenic
GTGATGGTGATGGTGAGATA+CGG 0.649915 tig0019197:+158484 Msa1371400:CDS
GATGGAAAATTACTTGCAAG+TGG 0.651402 tig0019197:+157306 Msa1371400:CDS
AGGTGTACCGGTGTAGACCC+TGG 0.655843 tig0019197:-154300 None:intergenic
CACCAGCAAGATAAGGTAGG+GGG 0.660685 tig0019197:+155358 Msa1371400:CDS
GCAGGCTGTTATATGGTATG+CGG 0.663868 tig0019197:+157514 Msa1371400:intron
GGAAAATTACTTGCAAGTGG+TGG 0.669872 tig0019197:+157309 Msa1371400:CDS
GCAAGGTACCTCCCTAGACG+AGG 0.669924 tig0019197:-158723 None:intergenic
AGCATGTCAAACTCATATCG+AGG 0.671384 tig0019197:+155409 Msa1371400:CDS
AGGTTAGTCCAAAAGAGTGG+AGG 0.672044 tig0019197:-159546 None:intergenic
TCATCCAAAGAATCCCTCTG+TGG 0.672717 tig0019197:-153777 None:intergenic
GCAACTACCAGGGTCTACAC+CGG 0.673262 tig0019197:+154293 Msa1371400:CDS
ATTTACAGTTGAAACCGCCA+AGG 0.674075 tig0019197:-159349 None:intergenic
AAGGACCAATGAGAAGCACT+CGG 0.676097 tig0019197:+153002 Msa1371400:CDS
ACGGATCCTAGAGATCCTGT+TGG 0.677640 tig0019197:+156578 Msa1371400:CDS
TTTGAGGAATCTTACCAACA+GGG 0.679460 tig0019197:-152791 None:intergenic
GATTTCAACCTCGTCTAGGG+AGG 0.679700 tig0019197:+158715 Msa1371400:CDS
CTTTGCTTACATCCATACAA+CGG 0.680525 tig0019197:-156601 None:intergenic
GGATGGCCTTTCAAACCCTG+GGG 0.681233 tig0019197:+154970 Msa1371400:CDS
ATCCAAAGAATCCCTCTGTG+GGG 0.683864 tig0019197:-153775 None:intergenic
CTCGTAGTCAGCAACTACCA+GGG 0.685612 tig0019197:+154283 Msa1371400:CDS
CGTTGTATGGATGTAAGCAA+AGG 0.710350 tig0019197:+156602 Msa1371400:CDS
CGGTATTGGAGCATAAACAA+CGG 0.729220 tig0019197:+158504 Msa1371400:CDS
GACCAATGAGAAGCACTCGG+AGG 0.730786 tig0019197:+153005 Msa1371400:CDS
GTTGGATCACCTCTTCATGG+CGG 0.742763 tig0019197:+155010 Msa1371400:CDS
GATGGCCTTTCAAACCCTGG+GGG 0.747909 tig0019197:+154971 Msa1371400:CDS
AGCATATCTGTATCTCCACG+GGG 0.764619 tig0019197:-155046 None:intergenic
AAAGTGCGAAGAGAATACCC+AGG 0.782358 tig0019197:-158393 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATAAAATAAAGATAAAA+AGG - tig0019197:155104-155123 None:intergenic 10.0%
!!! AAAAGATTTTATTTCTTATT+TGG + tig0019197:155985-156004 Msa1371400:intron 10.0%
!!! TTATTATCGCTTTTAATTTA+TGG + tig0019197:153412-153431 Msa1371400:intron 15.0%
!!! TATTTTTCCATAAAGATTTT+TGG + tig0019197:154475-154494 Msa1371400:intron 15.0%
!!! ATTTTTCCATAAAGATTTTT+GGG + tig0019197:154476-154495 Msa1371400:intron 15.0%
!!! AGTTAAACAATTTTATCTAT+AGG + tig0019197:155134-155153 Msa1371400:intron 15.0%
!!! ATCTATTTACTTGTTTTTTA+AGG + tig0019197:155719-155738 Msa1371400:intron 15.0%
!!! ATTTTATGATCAATATAAAG+TGG - tig0019197:156639-156658 None:intergenic 15.0%
!!! GTTTTCAAATTAAATATTTG+AGG - tig0019197:157049-157068 None:intergenic 15.0%
!!! ATTATTTCTATATTTTCCAA+AGG + tig0019197:157722-157741 Msa1371400:intron 15.0%
!!! TTATTTCTATATTTTCCAAA+GGG + tig0019197:157723-157742 Msa1371400:intron 15.0%
!!! ATATAAGATCATCTTTATTT+GGG - tig0019197:158458-158477 None:intergenic 15.0%
!!! CTTTATCTTCTATTTTTTAA+GGG + tig0019197:158622-158641 Msa1371400:intron 15.0%
!! TGAAGAAATAAACAAAGTAA+AGG - tig0019197:152416-152435 None:intergenic 20.0%
!!! TATTTCTTCATTTTGCTTAA+TGG + tig0019197:152477-152496 Msa1371400:intron 20.0%
!!! ATTTCTTCATTTTGCTTAAT+GGG + tig0019197:152478-152497 Msa1371400:intron 20.0%
!! AAGCAACTAAATCAATAAAA+TGG - tig0019197:152876-152895 None:intergenic 20.0%
!!! TTCTTTATATCTTAGTCTTT+TGG + tig0019197:154069-154088 Msa1371400:intron 20.0%
!! TATGAAAGAGATTTACTTTA+TGG + tig0019197:155810-155829 Msa1371400:intron 20.0%
!!! TTGTTGGTTATGTAATTAAA+AGG + tig0019197:157094-157113 Msa1371400:intron 20.0%
!! CAAAATTCATTTCTTTATTC+TGG + tig0019197:157445-157464 Msa1371400:intron 20.0%
!! TTACTAATATAATACCACTT+TGG + tig0019197:157695-157714 Msa1371400:intron 20.0%
!! TACTAATATAATACCACTTT+GGG + tig0019197:157696-157715 Msa1371400:intron 20.0%
!! CTTAAAAAATATGAGGATTA+CGG - tig0019197:158140-158159 None:intergenic 20.0%
!! ACATGATCTTAAAAAATATG+AGG - tig0019197:158147-158166 None:intergenic 20.0%
!! TTAGATTAATGTTTACTACA+TGG + tig0019197:158192-158211 Msa1371400:intron 20.0%
!! CATATAAGATCATCTTTATT+TGG - tig0019197:158459-158478 None:intergenic 20.0%
!! CCTTAAAAAATAGAAGATAA+AGG - tig0019197:158624-158643 None:intergenic 20.0%
!!! CCTTTATCTTCTATTTTTTA+AGG + tig0019197:158621-158640 Msa1371400:intron 20.0%
!!! GTTTTACCTTTAATGAATAT+CGG - tig0019197:158800-158819 None:intergenic 20.0%
!! GAACTTAAAATATTAACCAA+TGG + tig0019197:158916-158935 Msa1371400:intron 20.0%
!! TTAAAAAATCCAAAAAAGAG+AGG - tig0019197:159515-159534 None:intergenic 20.0%
! AAAGGAAAAACTGGATTTAA+AGG + tig0019197:152828-152847 Msa1371400:intron 25.0%
! TAGTTGAAAGAAAACTTTCA+TGG + tig0019197:153050-153069 Msa1371400:intron 25.0%
!! TGTTTTTCACATGTTTGTAA+AGG + tig0019197:153164-153183 Msa1371400:intron 25.0%
!!! TTGATTGTTTTAATGAACTG+CGG + tig0019197:153231-153250 Msa1371400:intron 25.0%
! TAGTACCATCAATTTAACAA+CGG - tig0019197:153350-153369 None:intergenic 25.0%
! AACAATGTTCATCTTATAGT+AGG - tig0019197:153837-153856 None:intergenic 25.0%
!!! CATATGTTCATTGCTTTTTT+TGG + tig0019197:153866-153885 Msa1371400:intron 25.0%
!!! TTATATCTTAGTCTTTTGGA+CGG + tig0019197:154073-154092 Msa1371400:intron 25.0%
!!! ATCATTAATTTTTCGAAAGC+AGG - tig0019197:154105-154124 None:intergenic 25.0%
! ATGAAACCCAAAAATCTTTA+TGG - tig0019197:154485-154504 None:intergenic 25.0%
! TTTCATTGTAACATTAGTTG+TGG + tig0019197:154499-154518 Msa1371400:intron 25.0%
! TACACTGTTTACTACAATTA+CGG - tig0019197:154546-154565 None:intergenic 25.0%
!! AACAACAATTTGACTTTGAA+AGG + tig0019197:154601-154620 Msa1371400:CDS 25.0%
!! ACAACAATTTGACTTTGAAA+GGG + tig0019197:154602-154621 Msa1371400:CDS 25.0%
!! AGTAATGAAAGTTTGTTTGA+AGG - tig0019197:154720-154739 None:intergenic 25.0%
!! CCTTTCTTATCCTTTTATTA+GGG + tig0019197:154743-154762 Msa1371400:intron 25.0%
!!! AACATTTGTAGTTGATGAAA+CGG - tig0019197:154830-154849 None:intergenic 25.0%
! CTTCTGAATAATAGGAATAT+TGG + tig0019197:154938-154957 Msa1371400:CDS 25.0%
!! TATGCAAATCATGAATCTTT+TGG - tig0019197:155173-155192 None:intergenic 25.0%
! TACATTTCTACAGCTATAAA+AGG - tig0019197:155451-155470 None:intergenic 25.0%
!! ATTATGCATGTATTCTTTTG+TGG + tig0019197:155764-155783 Msa1371400:intron 25.0%
!! TTTGTGGTTAGTGTATTTTA+TGG + tig0019197:155780-155799 Msa1371400:intron 25.0%
!!! TGTGACTTTGAGAATTTTAA+TGG + tig0019197:155840-155859 Msa1371400:intron 25.0%
!!! ACTTTGAGAATTTTAATGGT+GGG + tig0019197:155844-155863 Msa1371400:intron 25.0%
! TTATAATAATGTCACCAAGT+TGG - tig0019197:156060-156079 None:intergenic 25.0%
! TTTGAAGAACTACTATTATG+AGG - tig0019197:156312-156331 None:intergenic 25.0%
!! TACTCATTGCAATTTCATTT+TGG + tig0019197:156453-156472 Msa1371400:intron 25.0%
!!! TTTTTTATCGCAAGATGATA+CGG + tig0019197:156559-156578 Msa1371400:CDS 25.0%
! TCTTATCTTTCAGAATTTGA+AGG + tig0019197:156735-156754 Msa1371400:intron 25.0%
!! TTCTTTATTCTGGTTAGATA+TGG + tig0019197:157455-157474 Msa1371400:intron 25.0%
! ACTAATATAATACCACTTTG+GGG + tig0019197:157697-157716 Msa1371400:intron 25.0%
!! ATCTTTATAACTTTTCAGAG+TGG - tig0019197:157806-157825 None:intergenic 25.0%
! AAAATACTTTCAGTGAAAGA+TGG - tig0019197:157839-157858 None:intergenic 25.0%
!! TTTGAGATTGTTCAAGTTAT+AGG + tig0019197:157941-157960 Msa1371400:intron 25.0%
!!! TAAACACCAACACTTATTTT+GGG + tig0019197:158044-158063 Msa1371400:intron 25.0%
!!! ACATAGATGCTATTTTATCA+TGG + tig0019197:158108-158127 Msa1371400:intron 25.0%
! TCGAATCTAAATACAATAAC+AGG - tig0019197:158242-158261 None:intergenic 25.0%
! GTTAGATCTATATCTTTACT+GGG + tig0019197:158264-158283 Msa1371400:intron 25.0%
! ACAATTCATCTTCTATATAG+AGG - tig0019197:158323-158342 None:intergenic 25.0%
! ATGAATTGTGTTTCTCTAAT+GGG + tig0019197:158334-158353 Msa1371400:intron 25.0%
!! TAAAGTGACAATTTTCTTGT+TGG + tig0019197:158669-158688 Msa1371400:intron 25.0%
!! TCTAAAACTATGATGATAAC+CGG - tig0019197:158893-158912 None:intergenic 25.0%
! TACAACATTAAAACAACCAT+TGG - tig0019197:158935-158954 None:intergenic 25.0%
! TAATGTTGTACAATGATTGT+AGG + tig0019197:158945-158964 Msa1371400:intron 25.0%
! AATGTTGTACAATGATTGTA+GGG + tig0019197:158946-158965 Msa1371400:intron 25.0%
! CTTAATTGCATATTAGAGTA+GGG - tig0019197:159225-159244 None:intergenic 25.0%
! TCTTAATTGCATATTAGAGT+AGG - tig0019197:159226-159245 None:intergenic 25.0%
! AAGAAATTCATGCTTGATAT+TGG + tig0019197:159242-159261 Msa1371400:intron 25.0%
!!! GTAATTATTCCTCTCTTTTT+TGG + tig0019197:159503-159522 Msa1371400:three_prime_UTR 25.0%
! CAAAGTTCGAATATTGTATA+TGG - tig0019197:159682-159701 None:intergenic 25.0%
!! ATTTCTTCATTTTTCCCACA+TGG + tig0019197:152427-152446 Msa1371400:intron 30.0%
ATGAAAAAGAAAAGCCATGT+GGG - tig0019197:152444-152463 None:intergenic 30.0%
! TTTTCTTTGTTGGGTTTCTT+AGG + tig0019197:152568-152587 Msa1371400:intron 30.0%
!! TTCATAAAAGCACAGTTTTG+AGG - tig0019197:152810-152829 None:intergenic 30.0%
! CAAAACTGTGCTTTTATGAA+AGG + tig0019197:152810-152829 Msa1371400:intron 30.0%
! GCTTTTATGAAAGGAAAAAC+TGG + tig0019197:152819-152838 Msa1371400:intron 30.0%
ATGCTATGCTAGTTAAAAGA+AGG + tig0019197:153083-153102 Msa1371400:intron 30.0%
!!! TGATTGTTTTAATGAACTGC+GGG + tig0019197:153232-153251 Msa1371400:intron 30.0%
AACAACGGTAACAAAGATAA+TGG - tig0019197:153335-153354 None:intergenic 30.0%
TGTTACCGTTGTTAAATTGA+TGG + tig0019197:153342-153361 Msa1371400:intron 30.0%
! GTTGTTAAATTGATGGTACT+AGG + tig0019197:153349-153368 Msa1371400:intron 30.0%
TGATTAATTGAGTCTGCATA+CGG - tig0019197:153449-153468 None:intergenic 30.0%
TATGCAGACTCAATTAATCA+AGG + tig0019197:153449-153468 Msa1371400:intron 30.0%
AACAACAGCAAAATAGAGAT+AGG + tig0019197:153655-153674 Msa1371400:CDS 30.0%
ACAACAGCAAAATAGAGATA+GGG + tig0019197:153656-153675 Msa1371400:CDS 30.0%
AATAGCAACAAAGATGTATG+AGG + tig0019197:153737-153756 Msa1371400:CDS 30.0%
ATGTATGAGGAAAGGTTAAA+AGG + tig0019197:153750-153769 Msa1371400:CDS 30.0%
TCAATATTGAGGCATGATTT+GGG - tig0019197:153939-153958 None:intergenic 30.0%
TTCAATATTGAGGCATGATT+TGG - tig0019197:153940-153959 None:intergenic 30.0%
TTGCCTGAAATCAAGAAATT+TGG - tig0019197:154220-154239 None:intergenic 30.0%
GAAGTAACAAGATAACTATG+GGG - tig0019197:154330-154349 None:intergenic 30.0%
GGAAGTAACAAGATAACTAT+GGG - tig0019197:154331-154350 None:intergenic 30.0%
AGGAAGTAACAAGATAACTA+TGG - tig0019197:154332-154351 None:intergenic 30.0%
AAGCAGCTAATATGGAATAT+AGG - tig0019197:154352-154371 None:intergenic 30.0%
CATAAAGAGTGAGATAAATC+CGG + tig0019197:154400-154419 Msa1371400:CDS 30.0%
ACACTGTTTACTACAATTAC+GGG - tig0019197:154545-154564 None:intergenic 30.0%
!!! ATTTTCACTTTTTTTGTGCC+AGG + tig0019197:154565-154584 Msa1371400:intron 30.0%
GAAAGTAGAATATATCTGCA+GGG - tig0019197:154673-154692 None:intergenic 30.0%
TGAAAGTAGAATATATCTGC+AGG - tig0019197:154674-154693 None:intergenic 30.0%
! GCCTTTCTTATCCTTTTATT+AGG + tig0019197:154742-154761 Msa1371400:intron 30.0%
CCCTAATAAAAGGATAAGAA+AGG - tig0019197:154746-154765 None:intergenic 30.0%
! CTTATCCTTTTATTAGGGTT+TGG + tig0019197:154748-154767 Msa1371400:intron 30.0%
TGAGAATGCTTCTGAATAAT+AGG + tig0019197:154930-154949 Msa1371400:CDS 30.0%
! TAGGAATATTGGCCTAAATA+AGG + tig0019197:154949-154968 Msa1371400:CDS 30.0%
! AATATTGGCCTAAATAAGGA+TGG + tig0019197:154953-154972 Msa1371400:CDS 30.0%
AGATACAGATATGCTAATGA+AGG + tig0019197:155054-155073 Msa1371400:CDS 30.0%
TTTGTATGTGTAGTTGAAAC+TGG + tig0019197:155210-155229 Msa1371400:intron 30.0%
! TTTTTCTGATATGCTCAATC+AGG + tig0019197:155498-155517 Msa1371400:intron 30.0%
ATCATTAAGAATCTCATCCT+TGG - tig0019197:155624-155643 None:intergenic 30.0%
AAGGATGAGATTCTTAATGA+TGG + tig0019197:155623-155642 Msa1371400:intron 30.0%
ATGAGATTCTTAATGATGGT+TGG + tig0019197:155627-155646 Msa1371400:intron 30.0%
! TTCACCAATTTTTGCAATAG+TGG + tig0019197:155655-155674 Msa1371400:intron 30.0%
!! GACTTTGAGAATTTTAATGG+TGG + tig0019197:155843-155862 Msa1371400:intron 30.0%
!!! AGCATTTTGGAATACAGAAT+AGG + tig0019197:155868-155887 Msa1371400:intron 30.0%
!!! GCATTTTGGAATACAGAATA+GGG + tig0019197:155869-155888 Msa1371400:intron 30.0%
GAATAGGGAATTTGAATCTT+TGG + tig0019197:155884-155903 Msa1371400:intron 30.0%
!! ATCTTTGGTTGTTTCTTCAA+TGG + tig0019197:155899-155918 Msa1371400:intron 30.0%
AACTACTTATATGTCCAACT+TGG + tig0019197:156043-156062 Msa1371400:intron 30.0%
ACTTATGTAGAGTATGAAAC+TGG + tig0019197:156092-156111 Msa1371400:intron 30.0%
TACATTAAGAGAACCATGTT+AGG - tig0019197:156120-156139 None:intergenic 30.0%
AAGGTTTCAAAAAACCAGAT+GGG + tig0019197:156144-156163 Msa1371400:intron 30.0%
TTTATACGCGGTTTAATTGA+TGG + tig0019197:156403-156422 Msa1371400:intron 30.0%
TGATAAGGATCTTGAATTGA+AGG + tig0019197:156484-156503 Msa1371400:CDS 30.0%
AGTGTAAAACGAATTTACAC+TGG + tig0019197:156896-156915 Msa1371400:intron 30.0%
TAAAGAGTAACTATGTACAG+TGG - tig0019197:157152-157171 None:intergenic 30.0%
! ATTTTCCATCAGATGAGAAA+TGG - tig0019197:157296-157315 None:intergenic 30.0%
!! TTTTTCAATTTCCTTCAAGC+AGG - tig0019197:157425-157444 None:intergenic 30.0%
TAGAAATAATTTCCCCAAAG+TGG - tig0019197:157712-157731 None:intergenic 30.0%
! GTAAACACCAACACTTATTT+TGG + tig0019197:158043-158062 Msa1371400:intron 30.0%
TTCAATAAACTTCCAATTGC+TGG - tig0019197:158073-158092 None:intergenic 30.0%
TTACTACATGGAGTTGTAAA+AGG + tig0019197:158204-158223 Msa1371400:intron 30.0%
CGTTAGATCTATATCTTTAC+TGG + tig0019197:158263-158282 Msa1371400:intron 30.0%
GATGTTAATGATTGCATTCT+TGG + tig0019197:158286-158305 Msa1371400:intron 30.0%
GATGAATTGTGTTTCTCTAA+TGG + tig0019197:158333-158352 Msa1371400:intron 30.0%
!! TGACAATTTTCTTGTTGGTT+AGG + tig0019197:158674-158693 Msa1371400:intron 30.0%
!! GACAATTTTCTTGTTGGTTA+GGG + tig0019197:158675-158694 Msa1371400:intron 30.0%
TTAGAAGTTCTACTTGAGTT+AGG + tig0019197:158838-158857 Msa1371400:intron 30.0%
TAGAAGTTCTACTTGAGTTA+GGG + tig0019197:158839-158858 Msa1371400:intron 30.0%
! AAGATAAAAAGTGCACAACT+CGG - tig0019197:158868-158887 None:intergenic 30.0%
!! TGTGCACTTTTTATCTTATC+CGG + tig0019197:158871-158890 Msa1371400:intron 30.0%
AGACAATAGATTCTGTATGT+TGG + tig0019197:158977-158996 Msa1371400:CDS 30.0%
GACAATAGATTCTGTATGTT+GGG + tig0019197:158978-158997 Msa1371400:CDS 30.0%
TCAACAAGAAAATAAAGACG+TGG - tig0019197:159171-159190 None:intergenic 30.0%
CTTGTTGATATTTGCGAATT+TGG + tig0019197:159183-159202 Msa1371400:intron 30.0%
! CTTTGGAAGTAACTAACATA+AGG + tig0019197:159411-159430 Msa1371400:exon 30.0%
AACGTTGCATTACATTACAT+AGG - tig0019197:159569-159588 None:intergenic 30.0%
GAGAGGTAAAAGAGAAATGA+AGG - tig0019197:152217-152236 None:intergenic 35.0%
!!! AGAGTTTGGTTTTCTTGCTA+TGG - tig0019197:152278-152297 None:intergenic 35.0%
! GTTTGAGACATGGTTGAAAA+AGG - tig0019197:152361-152380 None:intergenic 35.0%
AACCATGTCTCAAACTAACT+GGG + tig0019197:152366-152385 Msa1371400:exon 35.0%
CATGAAAAAGAAAAGCCATG+TGG - tig0019197:152445-152464 None:intergenic 35.0%
!!! TGCACACACTTTTTCTTTGT+TGG + tig0019197:152558-152577 Msa1371400:intron 35.0%
!!! GCACACACTTTTTCTTTGTT+GGG + tig0019197:152559-152578 Msa1371400:intron 35.0%
GTTGCATTGTGAGAAATTTC+AGG + tig0019197:152679-152698 Msa1371400:intron 35.0%
TCCATGATTACCTTGTTAAG+AGG + tig0019197:152715-152734 Msa1371400:CDS 35.0%
CCATGATTACCTTGTTAAGA+GGG + tig0019197:152716-152735 Msa1371400:CDS 35.0%
CTTTCAAATCCCTCTTAACA+AGG - tig0019197:152728-152747 None:intergenic 35.0%
TTTGAGGAATCTTACCAACA+GGG - tig0019197:152794-152813 None:intergenic 35.0%
!! TTTTGAGGAATCTTACCAAC+AGG - tig0019197:152795-152814 None:intergenic 35.0%
!! TCTGGGATATTTTCATTGCA+AGG + tig0019197:152983-153002 Msa1371400:CDS 35.0%
!! GTTTGCTATCACAGAATAGT+TGG + tig0019197:153201-153220 Msa1371400:intron 35.0%
AGACTCAATTAATCAAGGCA+AGG + tig0019197:153454-153473 Msa1371400:intron 35.0%
GACTCAATTAATCAAGGCAA+GGG + tig0019197:153455-153474 Msa1371400:intron 35.0%
!!! TCTCTATTTTGCTGTTGTTG+TGG - tig0019197:153654-153673 None:intergenic 35.0%
! TCTTAAATGGTAGCGCAAAT+GGG + tig0019197:153685-153704 Msa1371400:CDS 35.0%
CAACAAAGATGTATGAGGAA+AGG + tig0019197:153742-153761 Msa1371400:CDS 35.0%
TATGCTGTACAGCAAAGATT+TGG + tig0019197:153889-153908 Msa1371400:intron 35.0%
!! CAAAGATTTGGTGAGAACAT+GGG + tig0019197:153901-153920 Msa1371400:CDS 35.0%
AACAAAAAAACTCACCCTGA+AGG - tig0019197:153985-154004 None:intergenic 35.0%
TTCTGCATTCTCTATATCTG+TGG + tig0019197:154176-154195 Msa1371400:intron 35.0%
TCTGCATTCTCTATATCTGT+GGG + tig0019197:154177-154196 Msa1371400:intron 35.0%
GCACCAAATTTCTTGATTTC+AGG + tig0019197:154214-154233 Msa1371400:intron 35.0%
CTTTATGTCCTGATTCCAAA+TGG - tig0019197:154387-154406 None:intergenic 35.0%
ATTCCTAACAATGATCCTTC+AGG - tig0019197:154449-154468 None:intergenic 35.0%
GGATCATTGTTAGGAATTTC+TGG + tig0019197:154452-154471 Msa1371400:CDS 35.0%
! ACAATTTGACTTTGAAAGGG+TGG + tig0019197:154605-154624 Msa1371400:CDS 35.0%
TTGCTCCAAACCCTAATAAA+AGG - tig0019197:154756-154775 None:intergenic 35.0%
! TTGAAAGGCCATCCTTATTT+AGG - tig0019197:154964-154983 None:intergenic 35.0%
TTAGCATATCTGTATCTCCA+CGG - tig0019197:155051-155070 None:intergenic 35.0%
!! TTCCACCTTTTGCTTGTTTT+TGG + tig0019197:155597-155616 Msa1371400:intron 35.0%
TTGGACCAAAAACAAGCAAA+AGG - tig0019197:155605-155624 None:intergenic 35.0%
!!! TTTTGCTTGTTTTTGGTCCA+AGG + tig0019197:155604-155623 Msa1371400:intron 35.0%
CAAGCCACTATTGCAAAAAT+TGG - tig0019197:155662-155681 None:intergenic 35.0%
!!! TTTAATGGTGGGAAGCATTT+TGG + tig0019197:155855-155874 Msa1371400:intron 35.0%
! CTCTTTAACTTCAAGATTCG+AGG + tig0019197:155949-155968 Msa1371400:intron 35.0%
AGATTCGAGGATTGAATAGT+TGG + tig0019197:155962-155981 Msa1371400:intron 35.0%
! TATGAAACTGGTTCCTAACA+TGG + tig0019197:156104-156123 Msa1371400:intron 35.0%
GGTTCTCTTAATGTACTTGA+AGG + tig0019197:156125-156144 Msa1371400:intron 35.0%
GAAGGTTTCAAAAAACCAGA+TGG + tig0019197:156143-156162 Msa1371400:intron 35.0%
TCAGTGCTAAACATCATTAG+AGG - tig0019197:156336-156355 None:intergenic 35.0%
! CTAATGATGTTTAGCACTGA+TGG + tig0019197:156336-156355 Msa1371400:CDS 35.0%
TATAAAAGCAACTCACCAAC+TGG - tig0019197:156389-156408 None:intergenic 35.0%
TTGCAATGAGTATACATGCA+AGG - tig0019197:156445-156464 None:intergenic 35.0%
!! TTGCAATTTCATTTTGGCAG+TGG + tig0019197:156459-156478 Msa1371400:intron 35.0%
!! TGCAATTTCATTTTGGCAGT+GGG + tig0019197:156460-156479 Msa1371400:intron 35.0%
CTTTGCTTACATCCATACAA+CGG - tig0019197:156604-156623 None:intergenic 35.0%
CACATAAGAAACTCTTTGCA+AGG - tig0019197:156675-156694 None:intergenic 35.0%
! TGATGATGTAGTTAGAGGAA+TGG - tig0019197:156830-156849 None:intergenic 35.0%
!! CACTTTGATGATGTAGTTAG+AGG - tig0019197:156835-156854 None:intergenic 35.0%
CTCTAACTACATCATCAAAG+TGG + tig0019197:156833-156852 Msa1371400:intron 35.0%
!!! GGGCTGATTTTTTTTCTTTC+AGG + tig0019197:157213-157232 Msa1371400:intron 35.0%
GATGGAAAATTACTTGCAAG+TGG + tig0019197:157306-157325 Msa1371400:CDS 35.0%
TGCATTACATGAAAATCAGG+AGG - tig0019197:157497-157516 None:intergenic 35.0%
! TCCTGATTTTCATGTAATGC+AGG + tig0019197:157496-157515 Msa1371400:intron 35.0%
ATGTAATGCAGGCTGTTATA+TGG + tig0019197:157507-157526 Msa1371400:intron 35.0%
TTCATTCGACAAAACTGTCA+GGG + tig0019197:157628-157647 Msa1371400:CDS 35.0%
GTATGTTACTCAAAACCCTT+TGG - tig0019197:157741-157760 None:intergenic 35.0%
ACATACTATGCACATCACAA+TGG + tig0019197:157755-157774 Msa1371400:intron 35.0%
TGGTATCCCAAAATAAGTGT+TGG - tig0019197:158053-158072 None:intergenic 35.0%
!!! TATTTTGGGATACCAGCAAT+TGG + tig0019197:158058-158077 Msa1371400:intron 35.0%
GTAGTCTATGCATAAGTTTG+TGG + tig0019197:158165-158184 Msa1371400:intron 35.0%
! GTATTCTCTTCGCACTTTTA+CGG + tig0019197:158398-158417 Msa1371400:CDS 35.0%
! TATTCTCTTCGCACTTTTAC+GGG + tig0019197:158399-158418 Msa1371400:CDS 35.0%
GATCTTATATGTTCGTGTGA+TGG + tig0019197:158468-158487 Msa1371400:CDS 35.0%
! TGCAAAGCATCTTGTACAAA+GGG - tig0019197:158590-158609 None:intergenic 35.0%
TAGAAGATAAAGGCCATCTA+GGG - tig0019197:158614-158633 None:intergenic 35.0%
ATAGAAGATAAAGGCCATCT+AGG - tig0019197:158615-158634 None:intergenic 35.0%
TAATACGCAAGCTACAAAAC+AGG - tig0019197:158651-158670 None:intergenic 35.0%
!! AATTTTCTTGTTGGTTAGGG+TGG + tig0019197:158678-158697 Msa1371400:intron 35.0%
TATACTTGATGTGGAAACAC+AGG + tig0019197:158770-158789 Msa1371400:CDS 35.0%
TGATGGTTTAATTACTGCCT+TGG + tig0019197:159332-159351 Msa1371400:CDS 35.0%
AATTAATCCAAGCTGAGTTC+AGG + tig0019197:159611-159630 Msa1371400:three_prime_UTR 35.0%
GCAGAAGTAGATGAAGAGTT+TGG - tig0019197:152292-152311 None:intergenic 40.0%
ATCATCCAACACCTTCTACA+CGG + tig0019197:152332-152351 Msa1371400:five_prime_UTR 40.0%
CAACCATGTCTCAAACTAAC+TGG + tig0019197:152365-152384 Msa1371400:exon 40.0%
! TTCCCAGTTAGTTTGAGACA+TGG - tig0019197:152371-152390 None:intergenic 40.0%
CCCTCTTAACAAGGTAATCA+TGG - tig0019197:152719-152738 None:intergenic 40.0%
! AAAGTATCATCTGACCCTGT+TGG + tig0019197:152777-152796 Msa1371400:CDS 40.0%
! TTTTCTGTTTGAGTGGTGGT+CGG + tig0019197:152957-152976 Msa1371400:CDS 40.0%
ATGTTTGTAAAGGACCTTCG+TGG + tig0019197:153174-153193 Msa1371400:intron 40.0%
TGTTTGTAAAGGACCTTCGT+GGG + tig0019197:153175-153194 Msa1371400:intron 40.0%
!!! TTTTGCTGTTGTTGTGGTTG+TGG - tig0019197:153648-153667 None:intergenic 40.0%
GATAGGGCTCATCTCTTAAA+TGG + tig0019197:153672-153691 Msa1371400:CDS 40.0%
! CTCTTAAATGGTAGCGCAAA+TGG + tig0019197:153684-153703 Msa1371400:CDS 40.0%
ATGAAGGTAGAAGGATGTTC+TGG + tig0019197:153807-153826 Msa1371400:intron 40.0%
!! GCAAAGATTTGGTGAGAACA+TGG + tig0019197:153900-153919 Msa1371400:intron 40.0%
! TGCAGCTGACTTCAATATTG+AGG - tig0019197:153950-153969 None:intergenic 40.0%
! GATTTCAGGCAAGTTTTGCA+TGG + tig0019197:154228-154247 Msa1371400:intron 40.0%
TCAGGGAAAAGCAGCTAATA+TGG - tig0019197:154360-154379 None:intergenic 40.0%
TGATTCCAAATGGCAAGTCA+GGG - tig0019197:154377-154396 None:intergenic 40.0%
TTTGTGCCAGGATCAAATCA+AGG + tig0019197:154577-154596 Msa1371400:intron 40.0%
TTGTGCCAGGATCAAATCAA+GGG + tig0019197:154578-154597 Msa1371400:intron 40.0%
! TTGTTCCCTTGATTTGATCC+TGG - tig0019197:154586-154605 None:intergenic 40.0%
AAATGATCACGTACTGTGAG+TGG - tig0019197:154631-154650 None:intergenic 40.0%
GGTGACATGTTATCGAATGT+TGG + tig0019197:154992-155011 Msa1371400:CDS 40.0%
AATGTTGGATCACCTCTTCA+TGG + tig0019197:155007-155026 Msa1371400:CDS 40.0%
TAGCATATCTGTATCTCCAC+GGG - tig0019197:155050-155069 None:intergenic 40.0%
AGCATGTCAAACTCATATCG+AGG + tig0019197:155409-155428 Msa1371400:CDS 40.0%
CTCATATCGAGGAAATGATC+AGG + tig0019197:155420-155439 Msa1371400:CDS 40.0%
GTATAATGCTTGACGCATGA+CGG + tig0019197:155468-155487 Msa1371400:intron 40.0%
GTGTGAGTTCTTATGCTTTG+TGG + tig0019197:155572-155591 Msa1371400:intron 40.0%
GACCAAAAACAAGCAAAAGG+TGG - tig0019197:155602-155621 None:intergenic 40.0%
AAAGCAACCGGTATCTTCTT+CGG + tig0019197:156176-156195 Msa1371400:CDS 40.0%
TCCTGCAAATAGTTCAGGAA+CGG + tig0019197:156200-156219 Msa1371400:CDS 40.0%
TAGTTCAGGAACGGCAAATA+CGG + tig0019197:156209-156228 Msa1371400:CDS 40.0%
CTACTATTATGAGGCAAAGC+AGG - tig0019197:156303-156322 None:intergenic 40.0%
!! ATGTTTAGCACTGATGGTAC+TGG + tig0019197:156342-156361 Msa1371400:CDS 40.0%
TACATCACCTTCAAACCAGT+TGG + tig0019197:156371-156390 Msa1371400:CDS 40.0%
!!! TGGTGAGTTGCTTTTATACG+CGG + tig0019197:156391-156410 Msa1371400:intron 40.0%
TACGCGGTTTAATTGATGGA+AGG + tig0019197:156407-156426 Msa1371400:intron 40.0%
!! ATTTTGGCAGTGGGATGATA+AGG + tig0019197:156469-156488 Msa1371400:intron 40.0%
TCTTGAATTGAAGGCTGATG+TGG + tig0019197:156493-156512 Msa1371400:CDS 40.0%
CGTTGTATGGATGTAAGCAA+AGG + tig0019197:156602-156621 Msa1371400:CDS 40.0%
TCTTTATGCGTGTGTGTTGT+TGG + tig0019197:157078-157097 Msa1371400:intron 40.0%
CTCTTTAATTCCTTGACGTG+AGG + tig0019197:157165-157184 Msa1371400:intron 40.0%
ATCAGATGAGAAATGGCAAC+AGG - tig0019197:157289-157308 None:intergenic 40.0%
! TGTTGCCATTTCTCATCTGA+TGG + tig0019197:157288-157307 Msa1371400:CDS 40.0%
GGAAAATTACTTGCAAGTGG+TGG + tig0019197:157309-157328 Msa1371400:CDS 40.0%
TGGCCATGACAAAAAGGTTA+GGG + tig0019197:157329-157348 Msa1371400:intron 40.0%
! TTCCCCTAACCTTTTTGTCA+TGG - tig0019197:157335-157354 None:intergenic 40.0%
GCCTGCATTACATGAAAATC+AGG - tig0019197:157500-157519 None:intergenic 40.0%
AATGAAGATGTTGCTAGACG+TGG - tig0019197:157614-157633 None:intergenic 40.0%
CTTCATTCGACAAAACTGTC+AGG + tig0019197:157627-157646 Msa1371400:CDS 40.0%
TATATGCTTTCTATGCAGCC+TGG + tig0019197:158375-158394 Msa1371400:intron 40.0%
ATATGCTTTCTATGCAGCCT+GGG + tig0019197:158376-158395 Msa1371400:intron 40.0%
! ATATGTTCGTGTGATGGTGA+TGG + tig0019197:158474-158493 Msa1371400:CDS 40.0%
! CGGTATTGGAGCATAAACAA+CGG + tig0019197:158504-158523 Msa1371400:CDS 40.0%
CAGTTGTGTTAGAGTCTCTA+AGG + tig0019197:158527-158546 Msa1371400:CDS 40.0%
! GCAAAGCATCTTGTACAAAG+GGG - tig0019197:158589-158608 None:intergenic 40.0%
! CTGCAAAGCATCTTGTACAA+AGG - tig0019197:158591-158610 None:intergenic 40.0%
ACGAGGTTGAAATCTCATCT+GGG - tig0019197:158709-158728 None:intergenic 40.0%
ATGAGATTTCAACCTCGTCT+AGG + tig0019197:158711-158730 Msa1371400:CDS 40.0%
TGAGATTTCAACCTCGTCTA+GGG + tig0019197:158712-158731 Msa1371400:CDS 40.0%
CATCGTGTCTATACTTGATG+TGG + tig0019197:158761-158780 Msa1371400:CDS 40.0%
GGCATGCCGATATTCATTAA+AGG + tig0019197:158791-158810 Msa1371400:CDS 40.0%
TTCTGTATGTTGGGATCCAT+CGG + tig0019197:158987-159006 Msa1371400:CDS 40.0%
TCAGGATTTGGACTCTTGAA+GGG + tig0019197:159043-159062 Msa1371400:CDS 40.0%
GTTCATGAGCTTAGCTGTAA+TGG + tig0019197:159072-159091 Msa1371400:CDS 40.0%
GGTACATGTTGTGTAGTCAT+TGG + tig0019197:159263-159282 Msa1371400:intron 40.0%
ATGACTTTGTCTGCTCATGA+TGG + tig0019197:159315-159334 Msa1371400:CDS 40.0%
TGGTTTAATTACTGCCTTGG+CGG + tig0019197:159335-159354 Msa1371400:CDS 40.0%
ATTTACAGTTGAAACCGCCA+AGG - tig0019197:159352-159371 None:intergenic 40.0%
TTGGCGGTTTCAACTGTAAA+TGG + tig0019197:159351-159370 Msa1371400:CDS 40.0%
ACGACAAGTTCATCAAGCTT+TGG + tig0019197:159394-159413 Msa1371400:CDS 40.0%
! GTATCGCGAGTATTGTCAAT+CGG - tig0019197:159448-159467 None:intergenic 40.0%
! CATAGGTTAGTCCAAAAGAG+TGG - tig0019197:159552-159571 None:intergenic 40.0%
!! GTGTAGAAGGTGTTGGATGA+TGG - tig0019197:152333-152352 None:intergenic 45.0%
GAAAAAGGTGACCGTGTAGA+AGG - tig0019197:152346-152365 None:intergenic 45.0%
!! TGCTCAAGCTTTTCAAGCTG+AGG + tig0019197:152752-152771 Msa1371400:CDS 45.0%
!! GCTCAAGCTTTTCAAGCTGA+GGG + tig0019197:152753-152772 Msa1371400:CDS 45.0%
!! GCTTTATTTGCGTGTGTGTG+TGG + tig0019197:152892-152911 Msa1371400:intron 45.0%
!! TGTGTGGTTGATGGCAACAT+GGG + tig0019197:152908-152927 Msa1371400:intron 45.0%
ATTGCAGCTATTGATGCTCC+TGG + tig0019197:152931-152950 Msa1371400:intron 45.0%
CACTCAAACAGAAAACCTCC+AGG - tig0019197:152952-152971 None:intergenic 45.0%
! CTGGAGGTTTTCTGTTTGAG+TGG + tig0019197:152950-152969 Msa1371400:CDS 45.0%
! GAGGTTTTCTGTTTGAGTGG+TGG + tig0019197:152953-152972 Msa1371400:CDS 45.0%
!! AAGGACCAATGAGAAGCACT+CGG + tig0019197:153002-153021 Msa1371400:CDS 45.0%
GGTGGCTGCATCATATATAG+AGG + tig0019197:153026-153045 Msa1371400:CDS 45.0%
GATAGCAAACTAACCCACGA+AGG - tig0019197:153191-153210 None:intergenic 45.0%
!! AAATGGGTTAGCTGGAAACC+CGG + tig0019197:153701-153720 Msa1371400:CDS 45.0%
CTATTGCATTAGCAGTTGCC+GGG - tig0019197:153722-153741 None:intergenic 45.0%
GCTATTGCATTAGCAGTTGC+CGG - tig0019197:153723-153742 None:intergenic 45.0%
ATCCAAAGAATCCCTCTGTG+GGG - tig0019197:153778-153797 None:intergenic 45.0%
CATCCAAAGAATCCCTCTGT+GGG - tig0019197:153779-153798 None:intergenic 45.0%
TCATCCAAAGAATCCCTCTG+TGG - tig0019197:153780-153799 None:intergenic 45.0%
TTTGGATGACGCAGCAATGA+AGG + tig0019197:153791-153810 Msa1371400:CDS 45.0%
ATATTGAAGTCAGCTGCAGC+TGG + tig0019197:153952-153971 Msa1371400:CDS 45.0%
TGACTACGAGCTTGAACTTG+TGG - tig0019197:154273-154292 None:intergenic 45.0%
CAAGATAACTATGGGGACAG+AGG - tig0019197:154323-154342 None:intergenic 45.0%
!! CTTTTCCCTGACTTGCCATT+TGG + tig0019197:154369-154388 Msa1371400:intron 45.0%
CTGATTCCAAATGGCAAGTC+AGG - tig0019197:154378-154397 None:intergenic 45.0%
! CTGACTTGCCATTTGGAATC+AGG + tig0019197:154376-154395 Msa1371400:intron 45.0%
!! GCAGCTCTGGGATTTAAAAC+CGG - tig0019197:154422-154441 None:intergenic 45.0%
!!! GGTTTTAAATCCCAGAGCTG+CGG + tig0019197:154421-154440 Msa1371400:CDS 45.0%
!! GTTTTAAATCCCAGAGCTGC+GGG + tig0019197:154422-154441 Msa1371400:CDS 45.0%
GGTCCTGAAGGATCATTGTT+AGG + tig0019197:154443-154462 Msa1371400:CDS 45.0%
! GCAGCAAAAGCCTTATATGC+AGG + tig0019197:154796-154815 Msa1371400:CDS 45.0%
!! TGTAGTTGATGAAACGGCTG+AGG - tig0019197:154824-154843 None:intergenic 45.0%
ATAAGCTGTTGCTGATGCTG+TGG - tig0019197:154857-154876 None:intergenic 45.0%
CTACTTTCTTCACTGGCAGA+TGG - tig0019197:154905-154924 None:intergenic 45.0%
CTGCCAGTGAAGAAAGTAGA+AGG + tig0019197:154906-154925 Msa1371400:CDS 45.0%
CAGCCTTCTACTTTCTTCAC+TGG - tig0019197:154912-154931 None:intergenic 45.0%
AGCATATCTGTATCTCCACG+GGG - tig0019197:155049-155068 None:intergenic 45.0%
TAGCATGCACCAGCAAGATA+AGG + tig0019197:155351-155370 Msa1371400:CDS 45.0%
ATGCACCAGCAAGATAAGGT+AGG + tig0019197:155355-155374 Msa1371400:CDS 45.0%
TGCACCAGCAAGATAAGGTA+GGG + tig0019197:155356-155375 Msa1371400:CDS 45.0%
AAATGCAGTTAACCCTGCTG+TGG - tig0019197:155687-155706 None:intergenic 45.0%
GCTTTCTCTTTCTTCCCATC+TGG - tig0019197:156161-156180 None:intergenic 45.0%
GGGAAGAAAGAGAAAGCAAC+CGG + tig0019197:156164-156183 Msa1371400:CDS 45.0%
AAGCAACCGGTATCTTCTTC+GGG + tig0019197:156177-156196 Msa1371400:CDS 45.0%
! TATGAGTTGAGGGAGTTGAG+GGG - tig0019197:156257-156276 None:intergenic 45.0%
! GTATGAGTTGAGGGAGTTGA+GGG - tig0019197:156258-156277 None:intergenic 45.0%
! AGTATGAGTTGAGGGAGTTG+AGG - tig0019197:156259-156278 None:intergenic 45.0%
! TCTCCAGGAGTATGAGTTGA+GGG - tig0019197:156267-156286 None:intergenic 45.0%
! ATCTCCAGGAGTATGAGTTG+AGG - tig0019197:156268-156287 None:intergenic 45.0%
!! CAACTCACCAACTGGTTTGA+AGG - tig0019197:156381-156400 None:intergenic 45.0%
! TTTTAGCGTGTAACTCGCTG+TGG + tig0019197:156944-156963 Msa1371400:intron 45.0%
AATTCCTTGACGTGAGGCAA+TGG + tig0019197:157171-157190 Msa1371400:intron 45.0%
AAGTGGTGGCCATGACAAAA+AGG + tig0019197:157323-157342 Msa1371400:CDS 45.0%
GTGGCCATGACAAAAAGGTT+AGG + tig0019197:157328-157347 Msa1371400:intron 45.0%
GGCCATGACAAAAAGGTTAG+GGG + tig0019197:157330-157349 Msa1371400:intron 45.0%
TGTGCAATTGTCCTGCTTGA+AGG + tig0019197:157411-157430 Msa1371400:intron 45.0%
GCAGGCTGTTATATGGTATG+CGG + tig0019197:157514-157533 Msa1371400:intron 45.0%
TCGACAAAACTGTCAGGGTT+TGG + tig0019197:157633-157652 Msa1371400:CDS 45.0%
CGACAAAACTGTCAGGGTTT+GGG + tig0019197:157634-157653 Msa1371400:CDS 45.0%
AAAGTGCGAAGAGAATACCC+AGG - tig0019197:158396-158415 None:intergenic 45.0%
!! GTGATGGTGATGGTGAGATA+CGG + tig0019197:158484-158503 Msa1371400:CDS 45.0%
! GTGATGGTGAGATACGGTAT+TGG + tig0019197:158490-158509 Msa1371400:CDS 45.0%
GACGAGGTTGAAATCTCATC+TGG - tig0019197:158710-158729 None:intergenic 45.0%
TCTGTATGTTGGGATCCATC+GGG + tig0019197:158988-159007 Msa1371400:CDS 45.0%
GTCAGGATTTGGACTCTTGA+AGG + tig0019197:159042-159061 Msa1371400:CDS 45.0%
CAGGATTTGGACTCTTGAAG+GGG + tig0019197:159044-159063 Msa1371400:CDS 45.0%
AACCAATGACGAGCAGTGAA+GGG - tig0019197:159134-159153 None:intergenic 45.0%
AATAAAGACGTGGACTTGCC+TGG - tig0019197:159161-159180 None:intergenic 45.0%
TTGTGTAGTCATTGGAGCTG+TGG + tig0019197:159271-159290 Msa1371400:intron 45.0%
CTTGATGAACTTGTCGTGAC+TGG - tig0019197:159391-159410 None:intergenic 45.0%
ACAATACTCGCGATACAGTC+AGG + tig0019197:159452-159471 Msa1371400:three_prime_UTR 45.0%
TTAGTCCAAAAGAGTGGAGG+CGG - tig0019197:159546-159565 None:intergenic 45.0%
! AGGTTAGTCCAAAAGAGTGG+AGG - tig0019197:159549-159568 None:intergenic 45.0%
AAGTCTACCTGAACTCAGCT+TGG - tig0019197:159621-159640 None:intergenic 45.0%
!!! TTATTTTAAAAACATTTATT+TGG + tig0019197:154135-154154 Msa1371400:intron 5.0%
!!! ACAAAATAATAAAATTTTAT+TGG - tig0019197:156798-156817 None:intergenic 5.0%
AGAGAGAGAGAGAGAGAGAG+AGG - tig0019197:152232-152251 None:intergenic 50.0%
TTGCGTGTGTGTGTGGTTGA+TGG + tig0019197:152899-152918 Msa1371400:intron 50.0%
!! GTGTGTGGTTGATGGCAACA+TGG + tig0019197:152907-152926 Msa1371400:intron 50.0%
!! TTGAGTGGTGGTCGGTTTTC+TGG + tig0019197:152965-152984 Msa1371400:CDS 50.0%
!! TGAGTGGTGGTCGGTTTTCT+GGG + tig0019197:152966-152985 Msa1371400:CDS 50.0%
GTTAAAAGGTCCCCCACAGA+GGG + tig0019197:153764-153783 Msa1371400:CDS 50.0%
TCCAAAGAATCCCTCTGTGG+GGG - tig0019197:153777-153796 None:intergenic 50.0%
GACGCAGCAATGAAGGTAGA+AGG + tig0019197:153798-153817 Msa1371400:intron 50.0%
TGAGAACATGGGTCAGCTCT+TGG + tig0019197:153912-153931 Msa1371400:CDS 50.0%
! CAAGTTTTGCATGGCACTGC+TGG + tig0019197:154237-154256 Msa1371400:CDS 50.0%
! TTTTGCATGGCACTGCTGGT+GGG + tig0019197:154241-154260 Msa1371400:CDS 50.0%
CTCGTAGTCAGCAACTACCA+GGG + tig0019197:154283-154302 Msa1371400:CDS 50.0%
AAGGATGGCCTTTCAAACCC+TGG + tig0019197:154968-154987 Msa1371400:CDS 50.0%
AGGATGGCCTTTCAAACCCT+GGG + tig0019197:154969-154988 Msa1371400:CDS 50.0%
TCGATAACATGTCACCCCCA+GGG - tig0019197:154988-155007 None:intergenic 50.0%
TTCGATAACATGTCACCCCC+AGG - tig0019197:154989-155008 None:intergenic 50.0%
GTTGGATCACCTCTTCATGG+CGG + tig0019197:155010-155029 Msa1371400:CDS 50.0%
TATCTCCACGGGGAAAAGGA+GGG - tig0019197:155039-155058 None:intergenic 50.0%
TCTGTATCTCCACGGGGAAA+AGG - tig0019197:155043-155062 None:intergenic 50.0%
GCACCAGCAAGATAAGGTAG+GGG + tig0019197:155357-155376 Msa1371400:CDS 50.0%
CACCAGCAAGATAAGGTAGG+GGG + tig0019197:155358-155377 Msa1371400:CDS 50.0%
GTTTGACATGCTGCCATCCA+TGG - tig0019197:155401-155420 None:intergenic 50.0%
!! ATAGTGGCTTGTTCCACAGC+AGG + tig0019197:155671-155690 Msa1371400:intron 50.0%
!! TAGTGGCTTGTTCCACAGCA+GGG + tig0019197:155672-155691 Msa1371400:intron 50.0%
TCGGGTCCTGCAAATAGTTC+AGG + tig0019197:156195-156214 Msa1371400:CDS 50.0%
GCCGTTCCTGAACTATTTGC+AGG - tig0019197:156204-156223 None:intergenic 50.0%
! ATGAGTTGAGGGAGTTGAGG+GGG - tig0019197:156256-156275 None:intergenic 50.0%
ACTCCCTCAACTCATACTCC+TGG + tig0019197:156261-156280 Msa1371400:CDS 50.0%
! GGCATTGAAACAGCATCTCC+AGG - tig0019197:156282-156301 None:intergenic 50.0%
TGGATCGCTTTGTGGACGAT+GGG + tig0019197:156513-156532 Msa1371400:CDS 50.0%
ACGGATCCTAGAGATCCTGT+TGG + tig0019197:156578-156597 Msa1371400:CDS 50.0%
AGATCCTGTTGGCCGTTGTA+TGG + tig0019197:156589-156608 Msa1371400:CDS 50.0%
ACATCCATACAACGGCCAAC+AGG - tig0019197:156596-156615 None:intergenic 50.0%
GACATGACGCAGCAAAGTAG+CGG + tig0019197:156857-156876 Msa1371400:intron 50.0%
CGTGTAACTCGCTGTGGTAA+TGG + tig0019197:156950-156969 Msa1371400:intron 50.0%
GTGGCATGCTTGCACTGAAA+CGG - tig0019197:157595-157614 None:intergenic 50.0%
AGATGCTTTGCAGCCCTAGA+TGG + tig0019197:158598-158617 Msa1371400:intron 50.0%
GATTTCAACCTCGTCTAGGG+AGG + tig0019197:158715-158734 Msa1371400:CDS 50.0%
! TGTTTTCAGCTGCTGCAGCA+AGG - tig0019197:158743-158762 None:intergenic 50.0%
ATTGCTGGCATCTGTGAGTG+AGG + tig0019197:159014-159033 Msa1371400:CDS 50.0%
GTGAGGACTCTGTCAGGATT+TGG + tig0019197:159031-159050 Msa1371400:CDS 50.0%
GCAGTGAAGGGAATGTTGGA+TGG - tig0019197:159122-159141 None:intergenic 50.0%
ACGAGCAGTGAAGGGAATGT+TGG - tig0019197:159126-159145 None:intergenic 50.0%
TTCCCTTCACTGCTCGTCAT+TGG + tig0019197:159129-159148 Msa1371400:intron 50.0%
CAACCAATGACGAGCAGTGA+AGG - tig0019197:159135-159154 None:intergenic 50.0%
! GCTCGTCATTGGTTGTTACC+AGG + tig0019197:159140-159159 Msa1371400:intron 50.0%
GTCATTGGAGCTGTGGAACA+TGG + tig0019197:159278-159297 Msa1371400:intron 50.0%
! GGTGACCGTGTAGAAGGTGT+TGG - tig0019197:152340-152359 None:intergenic 55.0%
GCAGCTATTGATGCTCCTGG+AGG + tig0019197:152934-152953 Msa1371400:intron 55.0%
!! GACCAATGAGAAGCACTCGG+AGG + tig0019197:153005-153024 Msa1371400:CDS 55.0%
CACCTCCGAGTGCTTCTCAT+TGG - tig0019197:153010-153029 None:intergenic 55.0%
!! CAATGAGAAGCACTCGGAGG+TGG + tig0019197:153008-153027 Msa1371400:CDS 55.0%
TGCTGTGACTGCTGAGGTTG+AGG - tig0019197:153513-153532 None:intergenic 55.0%
TGTTGTGGTTGTGGCTGCTG+CGG - tig0019197:153639-153658 None:intergenic 55.0%
!! GGTAGCGCAAATGGGTTAGC+TGG + tig0019197:153693-153712 Msa1371400:CDS 55.0%
GGTTAAAAGGTCCCCCACAG+AGG + tig0019197:153763-153782 Msa1371400:CDS 55.0%
TCCCCCACAGAGGGATTCTT+TGG + tig0019197:153773-153792 Msa1371400:CDS 55.0%
TTGAAGTCAGCTGCAGCTGG+TGG + tig0019197:153955-153974 Msa1371400:CDS 55.0%
! GTTTTGCATGGCACTGCTGG+TGG + tig0019197:154240-154259 Msa1371400:CDS 55.0%
GCTCGTAGTCAGCAACTACC+AGG + tig0019197:154282-154301 Msa1371400:CDS 55.0%
GCAACTACCAGGGTCTACAC+CGG + tig0019197:154293-154312 Msa1371400:CDS 55.0%
! CTATGGGGACAGAGGTGTAC+CGG - tig0019197:154315-154334 None:intergenic 55.0%
! GGTTTGGAGCAACTTCGCTC+TGG + tig0019197:154764-154783 Msa1371400:CDS 55.0%
GGCTGAGGAGCCTGCATATA+AGG - tig0019197:154809-154828 None:intergenic 55.0%
GGATGGCCTTTCAAACCCTG+GGG + tig0019197:154970-154989 Msa1371400:CDS 55.0%
GATGGCCTTTCAAACCCTGG+GGG + tig0019197:154971-154990 Msa1371400:CDS 55.0%
TGTCACCCCCAGGGTTTGAA+AGG - tig0019197:154979-154998 None:intergenic 55.0%
GTATCTCCACGGGGAAAAGG+AGG - tig0019197:155040-155059 None:intergenic 55.0%
CTCCCCCTACCTTATCTTGC+TGG - tig0019197:155363-155382 None:intergenic 55.0%
CAGCAAGATAAGGTAGGGGG+AGG + tig0019197:155361-155380 Msa1371400:CDS 55.0%
CAAGATAAGGTAGGGGGAGG+TGG + tig0019197:155364-155383 Msa1371400:CDS 55.0%
! AGGTGGTGGTAGTGTCACCA+TGG + tig0019197:155381-155400 Msa1371400:CDS 55.0%
! GGTGGTAGTGTCACCATGGA+TGG + tig0019197:155385-155404 Msa1371400:CDS 55.0%
GCAGGACCCGAAGAAGATAC+CGG - tig0019197:156186-156205 None:intergenic 55.0%
TCAGGAACGGCAAATACGGC+AGG + tig0019197:156213-156232 Msa1371400:CDS 55.0%
! AGGGGGCTGAACTTGGTGAT+GGG - tig0019197:156239-156258 None:intergenic 55.0%
GGCTGATGTGGATCGCTTTG+TGG + tig0019197:156505-156524 Msa1371400:CDS 55.0%
GTGGATCGCTTTGTGGACGA+TGG + tig0019197:156512-156531 Msa1371400:CDS 55.0%
CAACGGCCAACAGGATCTCT+AGG - tig0019197:156587-156606 None:intergenic 55.0%
! TGTGCCATTGCCTCACGTCA+AGG - tig0019197:157178-157197 None:intergenic 55.0%
AGAGTGGCACGCTTCAAGAC+TGG - tig0019197:157790-157809 None:intergenic 55.0%
GGATCCATCGGGAGAATTGC+TGG + tig0019197:158999-159018 Msa1371400:CDS 55.0%
GATGCCAGCAATTCTCCCGA+TGG - tig0019197:159006-159025 None:intergenic 55.0%
CTGTGAGTGAGGACTCTGTC+AGG + tig0019197:159025-159044 Msa1371400:CDS 55.0%
TCCAAAAGAGTGGAGGCGGT+GGG - tig0019197:159542-159561 None:intergenic 55.0%
TGCGCATGCTGTGACTGCTG+AGG - tig0019197:153519-153538 None:intergenic 60.0%
CAGCTGGTGGTCAGCCTTCA+GGG + tig0019197:153968-153987 Msa1371400:CDS 60.0%
! AGGTGTACCGGTGTAGACCC+TGG - tig0019197:154303-154322 None:intergenic 60.0%
GGATCACCTCTTCATGGCGG+TGG + tig0019197:155013-155032 Msa1371400:CDS 60.0%
GATAAGGTAGGGGGAGGTGG+TGG + tig0019197:155367-155386 Msa1371400:CDS 60.0%
! GAGGGGGCTGAACTTGGTGA+TGG - tig0019197:156240-156259 None:intergenic 60.0%
GGAGTTGAGGGGGCTGAACT+TGG - tig0019197:156246-156265 None:intergenic 60.0%
! GCAAGGTACCTCCCTAGACG+AGG - tig0019197:158726-158745 None:intergenic 60.0%
! ACCCACCGCCTCCACTCTTT+TGG + tig0019197:159538-159557 Msa1371400:three_prime_UTR 60.0%
GTCCAAAAGAGTGGAGGCGG+TGG - tig0019197:159543-159562 None:intergenic 60.0%
GCAGCTGGTGGTCAGCCTTC+AGG + tig0019197:153967-153986 Msa1371400:CDS 65.0%
CCTTCAGGACCCGCAGCTCT+GGG - tig0019197:154434-154453 None:intergenic 65.0%
TCCTTCAGGACCCGCAGCTC+TGG - tig0019197:154435-154454 None:intergenic 65.0%
GGCTGCTGCGGCTGCGATTG+TGG - tig0019197:153627-153646 None:intergenic 70.0%
CCCAGAGCTGCGGGTCCTGA+AGG + tig0019197:154431-154450 Msa1371400:CDS 70.0%
GGAGGGCCACCGCCATGAAG+AGG - tig0019197:155022-155041 None:intergenic 70.0%
! GGTGGCCCTCCTTTTCCCCG+TGG + tig0019197:155031-155050 Msa1371400:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0019197 gene 152199 159722 152199 ID=Msa1371400;Name=Msa1371400
tig0019197 mRNA 152199 159722 152199 ID=Msa1371400-mRNA-1;Parent=Msa1371400;Name=Msa1371400-mRNA-1;_AED=0.15;_eAED=0.15;_QI=171|0.94|0.94|1|0.88|0.88|18|300|888
tig0019197 exon 152199 152401 152199 ID=Msa1371400-mRNA-1:exon:2208;Parent=Msa1371400-mRNA-1
tig0019197 exon 152701 152798 152701 ID=Msa1371400-mRNA-1:exon:2209;Parent=Msa1371400-mRNA-1
tig0019197 exon 152938 153047 152938 ID=Msa1371400-mRNA-1:exon:2210;Parent=Msa1371400-mRNA-1
tig0019197 exon 153456 153812 153456 ID=Msa1371400-mRNA-1:exon:2211;Parent=Msa1371400-mRNA-1
tig0019197 exon 153901 153989 153901 ID=Msa1371400-mRNA-1:exon:2212;Parent=Msa1371400-mRNA-1
tig0019197 exon 154236 154314 154236 ID=Msa1371400-mRNA-1:exon:2213;Parent=Msa1371400-mRNA-1
tig0019197 exon 154398 154473 154398 ID=Msa1371400-mRNA-1:exon:2214;Parent=Msa1371400-mRNA-1
tig0019197 exon 154587 154636 154587 ID=Msa1371400-mRNA-1:exon:2215;Parent=Msa1371400-mRNA-1
tig0019197 exon 154764 155075 154764 ID=Msa1371400-mRNA-1:exon:2216;Parent=Msa1371400-mRNA-1
tig0019197 exon 155223 155441 155223 ID=Msa1371400-mRNA-1:exon:2217;Parent=Msa1371400-mRNA-1
tig0019197 exon 156147 156392 156147 ID=Msa1371400-mRNA-1:exon:2218;Parent=Msa1371400-mRNA-1
tig0019197 exon 156479 156623 156479 ID=Msa1371400-mRNA-1:exon:2219;Parent=Msa1371400-mRNA-1
tig0019197 exon 157235 157344 157235 ID=Msa1371400-mRNA-1:exon:2220;Parent=Msa1371400-mRNA-1
tig0019197 exon 157518 157667 157518 ID=Msa1371400-mRNA-1:exon:2221;Parent=Msa1371400-mRNA-1
tig0019197 exon 158393 158548 158393 ID=Msa1371400-mRNA-1:exon:2222;Parent=Msa1371400-mRNA-1
tig0019197 exon 158696 158812 158696 ID=Msa1371400-mRNA-1:exon:2223;Parent=Msa1371400-mRNA-1
tig0019197 exon 158967 159143 158967 ID=Msa1371400-mRNA-1:exon:2224;Parent=Msa1371400-mRNA-1
tig0019197 exon 159279 159722 159279 ID=Msa1371400-mRNA-1:exon:2225;Parent=Msa1371400-mRNA-1
tig0019197 five_prime_UTR 152199 152369 152199 ID=Msa1371400-mRNA-1:five_prime_utr;Parent=Msa1371400-mRNA-1
tig0019197 CDS 152370 152401 152370 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 152701 152798 152701 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 152938 153047 152938 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 153456 153812 153456 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 153901 153989 153901 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 154236 154314 154236 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 154398 154473 154398 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 154587 154636 154587 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 154764 155075 154764 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 155223 155441 155223 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 156147 156392 156147 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 156479 156623 156479 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 157235 157344 157235 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 157518 157667 157518 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 158393 158548 158393 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 158696 158812 158696 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 158967 159143 158967 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 CDS 159279 159422 159279 ID=Msa1371400-mRNA-1:cds;Parent=Msa1371400-mRNA-1
tig0019197 three_prime_UTR 159423 159722 159423 ID=Msa1371400-mRNA-1:three_prime_utr;Parent=Msa1371400-mRNA-1
Gene Sequence

>Msa1371400

ATGTCTCAAACTAACTGGGAAGCTGATAAGATGTTAGATGTTTACATCCATGATTACCTTGTTAAGAGGGATTTGAAAGCTTCTGCTCAAGCTTTTCAAGCTGAGGGAAAAGTATCATCTGACCCTGTTGCTATTGATGCTCCTGGAGGTTTTCTGTTTGAGTGGTGGTCGGTTTTCTGGGATATTTTCATTGCAAGGACCAATGAGAAGCACTCGGAGGTGGCTGCATCATATATAGAGACTCAATTAATCAAGGCAAGGGAACAACAGCAACAGCAACAACAACAGCAGCAGCCTCAACCTCAGCAGTCACAGCATGCGCAGCAGCAGCAACACATGCAGATGCAACAACTTCTGATGCAGAGACATGCACAGCAGCAGCAACAGCAGCAGCAGCATCAGCAACAGCCACAATCGCAGCCGCAGCAGCCACAACCACAACAACAGCAAAATAGAGATAGGGCTCATCTCTTAAATGGTAGCGCAAATGGGTTAGCTGGAAACCCGGCAACTGCTAATGCAATAGCAACAAAGATGTATGAGGAAAGGTTAAAAGGTCCCCCACAGAGGGATTCTTTGGATGACGCAGCAATGAAGCAAAGATTTGGTGAGAACATGGGTCAGCTCTTGGACCCAAATCATGCCTCAATATTGAAGTCAGCTGCAGCTGGTGGTCAGCCTTCAGGGCAAGTTTTGCATGGCACTGCTGGTGGGATGTCTCCACAAGTTCAAGCTCGTAGTCAGCAACTACCAGGGTCTACACCGGACATAAAGAGTGAGATAAATCCGGTTTTAAATCCCAGAGCTGCGGGTCCTGAAGGATCATTGTTAGGAATTTCTGGATCAAATCAAGGGAACAACAATTTGACTTTGAAAGGGTGGCCACTCACAGGTTTGGAGCAACTTCGCTCTGGTTTACTTCAGCAGCAAAAGCCTTATATGCAGGCTCCTCAGCCGTTTCATCAACTACAAATGTTGACACCACAGCATCAGCAACAGCTTATGCTTGCACAACAGAGTTTGTCATCACCATCTGCCAGTGAAGAAAGTAGAAGGCTGAGAATGCTTCTGAATAATAGGAATATTGGCCTAAATAAGGATGGCCTTTCAAACCCTGGGGGTGACATGTTATCGAATGTTGGATCACCTCTTCATGGCGGTGGCCCTCCTTTTCCCCGTGGAGATACAGATATGCTAATGAAGTTGAAACTGGCTCAGTTACAGCAGCAGCAACAACAGCAGCAACATCAACAACAGTCGAGCATCAATGCACAACAGCAGCAACTTCAACAGCATGCTCTTTCAAATCAGCAATCTCAGACTTCAAATCATAGCATGCACCAGCAAGATAAGGTAGGGGGAGGTGGTGGTAGTGTCACCATGGATGGCAGCATGTCAAACTCATATCGAGGAAATGATCAGGTTTCAAAAAACCAGATGGGAAGAAAGAGAAAGCAACCGGTATCTTCTTCGGGTCCTGCAAATAGTTCAGGAACGGCAAATACGGCAGGCCCATCACCAAGTTCAGCCCCCTCAACTCCCTCAACTCATACTCCTGGAGATGCTGTTTCAATGCCTGCTTTGCCTCATAATAGTAGTTCTTCAAAGCCTCTAATGATGTTTAGCACTGATGGTACTGGAACTCTTACATCACCTTCAAACCAGTTGTGGGATGATAAGGATCTTGAATTGAAGGCTGATGTGGATCGCTTTGTGGACGATGGGTCTTTAGATGATAATGTAGAGTCTTTTTTATCGCAAGATGATACGGATCCTAGAGATCCTGTTGGCCGTTGTATGGATGTAAGCAAAGGCTTCACATTTTCTGATGTAAATTCTGTACGTGCAAGCTCAAGCAAAATTGCCTGTTGCCATTTCTCATCTGATGGAAAATTACTTGCAAGTGGTGGCCATGACAAAAAGGCTGTTATATGGTATGCGGATTCACTAAAACAAAAAGCTATTCTTGAAGAGCACTCATCTTTGATAACTGATGTCCGTTTCAGTGCAAGCATGCCACGTCTAGCAACATCTTCATTCGACAAAACTGTCAGGGTTTGGGATGTTGACAATCCTGGGTATTCTCTTCGCACTTTTACGGGACATTCTACATCTGTCATGTCACTAGATTTTCACCCAAATAAAGATGATCTTATATGTTCGTGTGATGGTGATGGTGAGATACGGTATTGGAGCATAAACAACGGCAGTTGTGTTAGAGTCTCTAAGGGTGGCACTACCCAGATGAGATTTCAACCTCGTCTAGGGAGGTACCTTGCTGCAGCAGCTGAAAACATCGTGTCTATACTTGATGTGGAAACACAGGCATGCCGATATTCATTAAAGGGTCACACAAAGACAATAGATTCTGTATGTTGGGATCCATCGGGAGAATTGCTGGCATCTGTGAGTGAGGACTCTGTCAGGATTTGGACTCTTGAAGGGGAATGTGTTCATGAGCTTAGCTGTAATGGAAGTAAGTTTCACTCATGTGTTTTCCATCCAACATTCCCTTCACTGCTCTCATTGGAGCTGTGGAACATGGCTGAGAACAAGACAATGACTTTGTCTGCTCATGATGGTTTAATTACTGCCTTGGCGGTTTCAACTGTAAATGGTTTAGTTGCTTCTGCCAGTCACGACAAGTTCATCAAGCTTTGGAAGTAA
Protein sequence

>Msa1371400

MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQLIKAREQQQQQQQQQQPQPQQSQHAQQQQHMQMQQLLMQRHAQQQQQQQQHQQQPQSQPQQPQPQQQQNRDRAHLLNGSANGLAGNPATANAIATKMYEERLKGPPQRDSLDDAAMKQRFGENMGQLLDPNHASILKSAAAGGQPSGQVLHGTAGGMSPQVQARSQQLPGSTPDIKSEINPVLNPRAAGPEGSLLGISGSNQGNNNLTLKGWPLTGLEQLRSGLLQQQKPYMQAPQPFHQLQMLTPQHQQQLMLAQQSLSSPSASEESRRLRMLLNNRNIGLNKDGLSNPGGDMLSNVGSPLHGGGPPFPRGDTDMLMKLKLAQLQQQQQQQQHQQQSSINAQQQQLQQHALSNQQSQTSNHSMHQQDKVGGGGGSVTMDGSMSNSYRGNDQVSKNQMGRKRKQPVSSSGPANSSGTANTAGPSPSSAPSTPSTHTPGDAVSMPALPHNSSSSKPLMMFSTDGTGTLTSPSNQLWDDKDLELKADVDRFVDDGSLDDNVESFLSQDDTDPRDPVGRCMDVSKGFTFSDVNSVRASSSKIACCHFSSDGKLLASGGHDKKAVIWYADSLKQKAILEEHSSLITDVRFSASMPRLATSSFDKTVRVWDVDNPGYSLRTFTGHSTSVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCVRVSKGGTTQMRFQPRLGRYLAAAAENIVSILDVETQACRYSLKGHTKTIDSVCWDPSGELLASVSEDSVRIWTLEGECVHELSCNGSKFHSCVFHPTFPSLLSLELWNMAENKTMTLSAHDGLITALAVSTVNGLVASASHDKFIKLWK*