Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373710 | XP_003593226.1 | 91.799 | 378 | 15 | 3 | 32 | 393 | 1 | 378 | 0.0 | 702 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373710 | sp|F4JWT7|TRDMT_ARATH | 63.514 | 370 | 122 | 2 | 34 | 390 | 12 | 381 | 2.36e-165 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373710 | G7IPK4 | 91.799 | 378 | 15 | 3 | 32 | 393 | 1 | 378 | 0.0 | 702 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0982000 | Msa1373710 | 0.981755 | 2.276980e-153 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373710 | MtrunA17_Chr2g0279341 | 91.799 | 378 | 15 | 3 | 32 | 393 | 1 | 378 | 0.0 | 702 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373710 | AT5G25480.1 | 63.514 | 370 | 122 | 2 | 34 | 390 | 12 | 381 | 2.40e-166 | 471 |
Find 87 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATATCTTTCTCTATTTC+TGG | 0.065119 | tig0019461:-134354 | None:intergenic |
| AAATAACGAGGCCTAGAATA+TGG | 0.229617 | tig0019461:-132306 | None:intergenic |
| TATAATTTGAAGTTTGTAAT+AGG | 0.242503 | tig0019461:+134202 | Msa1373710:three_prime_UTR |
| AGTTTGGAATCCCATATTCT+AGG | 0.286309 | tig0019461:+132295 | Msa1373710:CDS |
| TGCAAAACTGATTGAAATAC+TGG | 0.300711 | tig0019461:+132227 | Msa1373710:CDS |
| CACGTATCTGTAATAACTTT+TGG | 0.314998 | tig0019461:-133164 | None:intergenic |
| GTGCATCACCAGTGTCCTTC+TGG | 0.317578 | tig0019461:-131998 | None:intergenic |
| CAGCAGCAGCGCTTTGAATC+AGG | 0.349206 | tig0019461:-133136 | None:intergenic |
| ATTCTGAGCCCTTTACAGTT+TGG | 0.358939 | tig0019461:+132279 | Msa1373710:CDS |
| TGTTTGAGACTAATGTGTTC+TGG | 0.361567 | tig0019461:-133745 | None:intergenic |
| GAAGGGAACTGGCTCCCTTT+TGG | 0.367037 | tig0019461:+133186 | Msa1373710:CDS |
| TCTGGAAACTCGAAATCTTC+AGG | 0.368546 | tig0019461:-133727 | None:intergenic |
| GTTACTGATCTAGACAAATA+TGG | 0.372242 | tig0019461:+131847 | Msa1373710:CDS |
| GTATTAAAATGCTCAAATAA+TGG | 0.376128 | tig0019461:-132721 | None:intergenic |
| CCAGAAATAGAGAAAGATAT+TGG | 0.386497 | tig0019461:+134354 | Msa1373710:three_prime_UTR |
| AAATGCTCAAATAATGGTCT+TGG | 0.396371 | tig0019461:-132715 | None:intergenic |
| GCCTCCAAGTATGTTATTTG+TGG | 0.408200 | tig0019461:+132070 | Msa1373710:CDS |
| GGAAAATGTTGTTGGATTTG+AGG | 0.425798 | tig0019461:+132091 | Msa1373710:CDS |
| AATTTATAATGCACAATTGA+AGG | 0.426147 | tig0019461:+134291 | Msa1373710:three_prime_UTR |
| GCGTGTAAGGTTGGCAGGGA+GGG | 0.426988 | tig0019461:-131891 | None:intergenic |
| GTTGCTGTTTCAATCAACTA+TGG | 0.428731 | tig0019461:+134087 | Msa1373710:three_prime_UTR |
| TTGTCGCGTGTAAGGTTGGC+AGG | 0.429390 | tig0019461:-131896 | None:intergenic |
| CTCGAGTTCTACAGCGGTAT+CGG | 0.430262 | tig0019461:+130207 | Msa1373710:CDS |
| CTTGGAGGCTTCAATAAGAA+TGG | 0.435590 | tig0019461:-132056 | None:intergenic |
| TACAGATACGTGAAGGGAAC+TGG | 0.437473 | tig0019461:+133175 | Msa1373710:CDS |
| AATTCACCTTGTCGCGTGTA+AGG | 0.443007 | tig0019461:-131904 | None:intergenic |
| ATGGGATTCCAAACTGTAAA+GGG | 0.446915 | tig0019461:-132287 | None:intergenic |
| TTATTTGTGGAAAATGTTGT+TGG | 0.449545 | tig0019461:+132083 | Msa1373710:CDS |
| CCCAAGCTTGTTAGAGAGGT+GGG | 0.452713 | tig0019461:+132954 | Msa1373710:CDS |
| CCCACCTCTCTAACAAGCTT+GGG | 0.456097 | tig0019461:-132954 | None:intergenic |
| CCCCACCTCTCTAACAAGCT+TGG | 0.458339 | tig0019461:-132955 | None:intergenic |
| CGTGTAAGGTTGGCAGGGAG+GGG | 0.463425 | tig0019461:-131890 | None:intergenic |
| GGTGAAAAGATACTGAAGTA+AGG | 0.463425 | tig0019461:-133958 | None:intergenic |
| AATAACGAGGCCTAGAATAT+GGG | 0.473801 | tig0019461:-132305 | None:intergenic |
| TATCTTTCTCTATTTCTGGT+TGG | 0.477769 | tig0019461:-134350 | None:intergenic |
| TAACCTGAACAGTAGCCAAA+AGG | 0.481527 | tig0019461:-133201 | None:intergenic |
| AATACGATAAATTTCTCGAT+AGG | 0.489468 | tig0019461:-132805 | None:intergenic |
| TCCACAAATAACATACTTGG+AGG | 0.496061 | tig0019461:-132071 | None:intergenic |
| TGCACAATTGAAGGTAAAAG+AGG | 0.508971 | tig0019461:+134300 | Msa1373710:three_prime_UTR |
| CGCGTGTAAGGTTGGCAGGG+AGG | 0.510952 | tig0019461:-131892 | None:intergenic |
| ACAAATATGGTGCCGATGCA+TGG | 0.512998 | tig0019461:+131860 | Msa1373710:CDS |
| TTATACAGGTATGCATTGCT+AGG | 0.513797 | tig0019461:+133906 | Msa1373710:intron |
| CACCTTGTCGCGTGTAAGGT+TGG | 0.514669 | tig0019461:-131900 | None:intergenic |
| TTGGAGGCTTCAATAAGAAT+GGG | 0.517752 | tig0019461:-132055 | None:intergenic |
| AACCTGAACAGTAGCCAAAA+GGG | 0.519050 | tig0019461:-133200 | None:intergenic |
| GAAAATCCACTCACCTCTCT+CGG | 0.520162 | tig0019461:-133532 | None:intergenic |
| TCAACATTTGTATCGCTGCT+AGG | 0.523945 | tig0019461:-132835 | None:intergenic |
| AGGGGAAAGGAGCCATGCAT+CGG | 0.524990 | tig0019461:-131872 | None:intergenic |
| TATGGGATTCCAAACTGTAA+AGG | 0.527620 | tig0019461:-132288 | None:intergenic |
| GACGGTTGAAACAATCATCT+AGG | 0.536060 | tig0019461:-132678 | None:intergenic |
| ACCCAAGCTTGTTAGAGAGG+TGG | 0.544940 | tig0019461:+132953 | Msa1373710:CDS |
| AGAAGTGTCATTAGACAGAC+TGG | 0.546890 | tig0019461:-132875 | None:intergenic |
| GAAGGACACTGGTGATGCAC+GGG | 0.555849 | tig0019461:+132001 | Msa1373710:CDS |
| GTGAAAAGATACTGAAGTAA+GGG | 0.557005 | tig0019461:-133957 | None:intergenic |
| TTCACCCAAGCTTGTTAGAG+AGG | 0.557897 | tig0019461:+132950 | Msa1373710:CDS |
| AGAAGGACACTGGTGATGCA+CGG | 0.562723 | tig0019461:+132000 | Msa1373710:CDS |
| CAATGTGCAGCCAGTGAAGA+GGG | 0.564602 | tig0019461:+133468 | Msa1373710:intron |
| GGAAGATTATTTGTCAGTAG+AGG | 0.565298 | tig0019461:+132753 | Msa1373710:CDS |
| AGAACTTCAGAGACAGATGA+TGG | 0.569015 | tig0019461:+132898 | Msa1373710:CDS |
| CAAGCTTGTTAGAGAGGTGG+GGG | 0.569417 | tig0019461:+132956 | Msa1373710:CDS |
| AAAACATTCTAACTCGTGCA+AGG | 0.584886 | tig0019461:-134119 | None:intergenic |
| TAGATACTTTACACCGAGAG+AGG | 0.595625 | tig0019461:+133519 | Msa1373710:CDS |
| CCAAGCTTGTTAGAGAGGTG+GGG | 0.595655 | tig0019461:+132955 | Msa1373710:CDS |
| TGCCAACCTTACACGCGACA+AGG | 0.596230 | tig0019461:+131898 | Msa1373710:CDS |
| CTACAGCGGTATCGGTGGCA+TGG | 0.599145 | tig0019461:+130215 | Msa1373710:CDS |
| AAGGTTGGCAGGGAGGGGAA+AGG | 0.599157 | tig0019461:-131885 | None:intergenic |
| TTGGAGATTGAATTAGCTGA+CGG | 0.599184 | tig0019461:-132696 | None:intergenic |
| CGATACAAATGTTGAATCTG+CGG | 0.601690 | tig0019461:+132843 | Msa1373710:CDS |
| AAGTTATTACAGATACGTGA+AGG | 0.604612 | tig0019461:+133168 | Msa1373710:CDS |
| GAGTTCTACAGCGGTATCGG+TGG | 0.608979 | tig0019461:+130210 | Msa1373710:CDS |
| TTAGGTCTCCAGAAGGACAC+TGG | 0.610942 | tig0019461:+131990 | Msa1373710:intron |
| TATCGTTGCATGATACTCAC+AGG | 0.611617 | tig0019461:-134037 | None:intergenic |
| GAGGGACAAAACATCACTCA+AGG | 0.613161 | tig0019461:+133486 | Msa1373710:CDS |
| AACACATTAGTCTCAAACAA+CGG | 0.619587 | tig0019461:+133749 | Msa1373710:CDS |
| TCAATGTGCAGCCAGTGAAG+AGG | 0.620502 | tig0019461:+133467 | Msa1373710:intron |
| AAACATTCTAACTCGTGCAA+GGG | 0.622838 | tig0019461:-134118 | None:intergenic |
| CGAACACAACACAACCCTAG+TGG | 0.628364 | tig0019461:+130147 | Msa1373710:CDS |
| GATCATGTAACACAATGCCG+TGG | 0.632546 | tig0019461:+134064 | Msa1373710:three_prime_UTR |
| CAATCATCTAGGAAAGATGA+CGG | 0.637065 | tig0019461:-132667 | None:intergenic |
| GAACACAACACAACCCTAGT+GGG | 0.639261 | tig0019461:+130148 | Msa1373710:CDS |
| TGTCGCGTGTAAGGTTGGCA+GGG | 0.643675 | tig0019461:-131895 | None:intergenic |
| AGTTATTACAGATACGTGAA+GGG | 0.649697 | tig0019461:+133169 | Msa1373710:CDS |
| TTGATTGAAACAGCAACCCA+CGG | 0.660382 | tig0019461:-134081 | None:intergenic |
| TCTTGTGTTAGGTCTCCAGA+AGG | 0.665235 | tig0019461:+131983 | Msa1373710:intron |
| ATCATGTAACACAATGCCGT+GGG | 0.712509 | tig0019461:+134065 | Msa1373710:three_prime_UTR |
| AGAGTTCTCGAGTTCTACAG+CGG | 0.727673 | tig0019461:+130201 | Msa1373710:CDS |
| GATGAAAGCACAAGTAAACG+CGG | 0.746091 | tig0019461:+130337 | Msa1373710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGATTGATATATAAATAA+TGG | - | tig0019461:130247-130266 | None:intergenic | 10.0% |
| !! | TTAAAAGTTAAAAATAACAA+AGG | - | tig0019461:130681-130700 | None:intergenic | 10.0% |
| !! | CAATTATTGAAATTAGAAAT+TGG | - | tig0019461:130275-130294 | None:intergenic | 15.0% |
| !!! | TTTTAACTTTTAAGCTATTT+TGG | + | tig0019461:130688-130707 | Msa1373710:intron | 15.0% |
| !! | AAAAAAAAAAAGACATAACA+AGG | - | tig0019461:131005-131024 | None:intergenic | 15.0% |
| !!! | ATATTTGTTAAAGGAAAAAT+GGG | - | tig0019461:131668-131687 | None:intergenic | 15.0% |
| !!! | AATATTTGTTAAAGGAAAAA+TGG | - | tig0019461:131669-131688 | None:intergenic | 15.0% |
| !!! | TGAAGAATTATTTTTTTCTT+GGG | - | tig0019461:133063-133082 | None:intergenic | 15.0% |
| !!! | TTGAAGAATTATTTTTTTCT+TGG | - | tig0019461:133064-133083 | None:intergenic | 15.0% |
| !!! | TATAATTTGAAGTTTGTAAT+AGG | + | tig0019461:134202-134221 | Msa1373710:three_prime_UTR | 15.0% |
| !!! | ATTAATTACTTTTGATAAGT+TGG | + | tig0019461:134324-134343 | Msa1373710:three_prime_UTR | 15.0% |
| !!! | CATGATAAAATCCATATTTT+TGG | - | tig0019461:130741-130760 | None:intergenic | 20.0% |
| !!! | ATATGGATTTTATCATGTTT+TGG | + | tig0019461:130744-130763 | Msa1373710:intron | 20.0% |
| !!! | ACATAATAAACCATTTTTGT+TGG | + | tig0019461:131251-131270 | Msa1373710:intron | 20.0% |
| !!! | TTTTGTCGTAATATTTATCT+TGG | + | tig0019461:131472-131491 | Msa1373710:intron | 20.0% |
| !! | AAAGAAAATAAACATTTGCT+TGG | - | tig0019461:131561-131580 | None:intergenic | 20.0% |
| !! | AATTGAATTGATGTAGTTTA+TGG | - | tig0019461:131752-131771 | None:intergenic | 20.0% |
| !! | ATCAAAAATATATCCAAATC+AGG | - | tig0019461:131795-131814 | None:intergenic | 20.0% |
| !!! | TGATTTGGATATATTTTTGA+TGG | + | tig0019461:131794-131813 | Msa1373710:intron | 20.0% |
| !! | TCCTATATATGTTTCATTAA+TGG | + | tig0019461:132147-132166 | Msa1373710:intron | 20.0% |
| !! | ACCATTAATGAAACATATAT+AGG | - | tig0019461:132151-132170 | None:intergenic | 20.0% |
| !!! | GGATATATTTTATATCATGA+AGG | + | tig0019461:132403-132422 | Msa1373710:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTGCTGCT+GGG | + | tig0019461:132482-132501 | Msa1373710:intron | 20.0% |
| !!! | TTATTCTGATATTTTTACCT+AGG | + | tig0019461:132558-132577 | Msa1373710:intron | 20.0% |
| !! | TGAAAAAATTATACACATTC+AGG | - | tig0019461:132634-132653 | None:intergenic | 20.0% |
| !!! | TGAATGTGTATAATTTTTTC+AGG | + | tig0019461:132633-132652 | Msa1373710:intron | 20.0% |
| !! | GTATTAAAATGCTCAAATAA+TGG | - | tig0019461:132724-132743 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTGGGAATAAAT+AGG | - | tig0019461:133053-133072 | None:intergenic | 20.0% |
| !! | TTTAAACACAATATTAGACA+CGG | - | tig0019461:133592-133611 | None:intergenic | 20.0% |
| !! | AGCTCTATTACTAATTTAAA+TGG | + | tig0019461:133662-133681 | Msa1373710:intron | 20.0% |
| !! | TTAGTCAATTTGAAAAAGAA+TGG | - | tig0019461:134163-134182 | None:intergenic | 20.0% |
| !!! | TCTTTTTCAAATTGACTAAT+AGG | + | tig0019461:134164-134183 | Msa1373710:three_prime_UTR | 20.0% |
| !! | AATTTATAATGCACAATTGA+AGG | + | tig0019461:134291-134310 | Msa1373710:three_prime_UTR | 20.0% |
| ! | TTCTACATGTTCCAAAAATA+TGG | + | tig0019461:130727-130746 | Msa1373710:intron | 25.0% |
| !!! | ATTTTATCATGTTTTGGTCT+TGG | + | tig0019461:130750-130769 | Msa1373710:intron | 25.0% |
| !!! | TTTTATCATGTTTTGGTCTT+GGG | + | tig0019461:130751-130770 | Msa1373710:intron | 25.0% |
| !!! | GTAAGTTTTATAAGCTATCT+TGG | + | tig0019461:131183-131202 | Msa1373710:intron | 25.0% |
| !! | TTGATGTAGTTTGTCAATAA+TGG | - | tig0019461:131297-131316 | None:intergenic | 25.0% |
| ! | TAAATTCTGTGGTTTCAAAT+GGG | + | tig0019461:131417-131436 | Msa1373710:intron | 25.0% |
| !! | TTTATCTTGGTGTAAAGAAT+TGG | + | tig0019461:131485-131504 | Msa1373710:intron | 25.0% |
| ! | TAGTTAGTAGTGAATTAAAG+AGG | + | tig0019461:131608-131627 | Msa1373710:intron | 25.0% |
| !! | TGTGGCTAAATATTTGTTAA+AGG | - | tig0019461:131677-131696 | None:intergenic | 25.0% |
| ! | ACTACATCAATTCAATTTCT+TGG | + | tig0019461:131755-131774 | Msa1373710:intron | 25.0% |
| ! | AATGTTTAATCTACCTGATT+TGG | + | tig0019461:131779-131798 | Msa1373710:intron | 25.0% |
| !! | TTTTCCACAAATAACATACT+TGG | - | tig0019461:132077-132096 | None:intergenic | 25.0% |
| ! | TTATTTGTGGAAAATGTTGT+TGG | + | tig0019461:132083-132102 | Msa1373710:CDS | 25.0% |
| ! | CAGAGTAAAATAACATTCTA+AGG | - | tig0019461:132354-132373 | None:intergenic | 25.0% |
| ! | TATATCATGAAGGAATCAAT+TGG | + | tig0019461:132413-132432 | Msa1373710:intron | 25.0% |
| ! | GCAGCAAAAAAAAAAAAAAC+AGG | - | tig0019461:132481-132500 | None:intergenic | 25.0% |
| !!! | GTTTTTTTTTTTTTTGCTGC+TGG | + | tig0019461:132481-132500 | Msa1373710:intron | 25.0% |
| !! | TTTACATTTTACTGATAGTC+AGG | + | tig0019461:132519-132538 | Msa1373710:intron | 25.0% |
| !! | TTACATTTTACTGATAGTCA+GGG | + | tig0019461:132520-132539 | Msa1373710:intron | 25.0% |
| ! | AATACGATAAATTTCTCGAT+AGG | - | tig0019461:132808-132827 | None:intergenic | 25.0% |
| ! | TATGCTCAAAACCAATTAAT+GGG | - | tig0019461:133002-133021 | None:intergenic | 25.0% |
| ! | ATATGCTCAAAACCAATTAA+TGG | - | tig0019461:133003-133022 | None:intergenic | 25.0% |
| !!! | TTCTCATAATTTTGGAAGTA+TGG | + | tig0019461:133421-133440 | Msa1373710:intron | 25.0% |
| AAGCACTTGTGATATTGTTT+GGG | - | tig0019461:130549-130568 | None:intergenic | 30.0% | |
| TAAGCACTTGTGATATTGTT+TGG | - | tig0019461:130550-130569 | None:intergenic | 30.0% | |
| TAAAATAAGCCAATCCAAGT+AGG | + | tig0019461:130609-130628 | Msa1373710:intron | 30.0% | |
| ! | AGGCCATAAATGGATATTTT+TGG | + | tig0019461:130629-130648 | Msa1373710:intron | 30.0% |
| GAGCCAAAAATATCCATTTA+TGG | - | tig0019461:130635-130654 | None:intergenic | 30.0% | |
| AGAATGATGAATTAACGCTT+AGG | + | tig0019461:130880-130899 | Msa1373710:intron | 30.0% | |
| !! | CATAACAAGGTATTGAAAGA+GGG | - | tig0019461:130992-131011 | None:intergenic | 30.0% |
| !! | ACATAACAAGGTATTGAAAG+AGG | - | tig0019461:130993-131012 | None:intergenic | 30.0% |
| ! | TAAGTCTTTGTTTGAGAGTT+TGG | - | tig0019461:131110-131129 | None:intergenic | 30.0% |
| AAACTCTCAAACAAAGACTT+AGG | + | tig0019461:131109-131128 | Msa1373710:intron | 30.0% | |
| !! | AAACCATTTTTGTTGGTCAT+TGG | + | tig0019461:131258-131277 | Msa1373710:intron | 30.0% |
| ! | AATATTTGCTAATGTTTCCC+TGG | + | tig0019461:131324-131343 | Msa1373710:intron | 30.0% |
| !! | CATGTTTGTTGTAAATTCTG+TGG | + | tig0019461:131406-131425 | Msa1373710:intron | 30.0% |
| GTAAATTCTGTGGTTTCAAA+TGG | + | tig0019461:131416-131435 | Msa1373710:intron | 30.0% | |
| AAATTCTGTGGTTTCAAATG+GGG | + | tig0019461:131418-131437 | Msa1373710:intron | 30.0% | |
| ! | GAAGTAATGGAAACCTTAAT+TGG | + | tig0019461:131529-131548 | Msa1373710:intron | 30.0% |
| TCACTACTAACTAATGCAAT+GGG | - | tig0019461:131601-131620 | None:intergenic | 30.0% | |
| TTCACTACTAACTAATGCAA+TGG | - | tig0019461:131602-131621 | None:intergenic | 30.0% | |
| GTAATCTGACATAAAATTCC+TGG | - | tig0019461:131726-131745 | None:intergenic | 30.0% | |
| !! | ATATTTTTGATGGCTGACTT+AGG | + | tig0019461:131804-131823 | Msa1373710:intron | 30.0% |
| !! | TATTTTTGATGGCTGACTTA+GGG | + | tig0019461:131805-131824 | Msa1373710:intron | 30.0% |
| GTTACTGATCTAGACAAATA+TGG | + | tig0019461:131847-131866 | Msa1373710:CDS | 30.0% | |
| GTTACTCATAATCTTGTGTT+AGG | + | tig0019461:131972-131991 | Msa1373710:intron | 30.0% | |
| TGCAAAACTGATTGAAATAC+TGG | + | tig0019461:132227-132246 | Msa1373710:CDS | 30.0% | |
| AATTAGTGCTTCAAATGACT+TGG | + | tig0019461:132381-132400 | Msa1373710:intron | 30.0% | |
| ATTAGTGCTTCAAATGACTT+GGG | + | tig0019461:132382-132401 | Msa1373710:intron | 30.0% | |
| AATCAACTAGAAAGAATCCT+AGG | - | tig0019461:132578-132597 | None:intergenic | 30.0% | |
| !! | AGTTGATTCTGTAAACCTTT+TGG | + | tig0019461:132590-132609 | Msa1373710:intron | 30.0% |
| AAATGCTCAAATAATGGTCT+TGG | - | tig0019461:132718-132737 | None:intergenic | 30.0% | |
| ATGCTCAAAACCAATTAATG+GGG | - | tig0019461:133001-133020 | None:intergenic | 30.0% | |
| ! | CACGTATCTGTAATAACTTT+TGG | - | tig0019461:133167-133186 | None:intergenic | 30.0% |
| AAGTTATTACAGATACGTGA+AGG | + | tig0019461:133168-133187 | Msa1373710:CDS | 30.0% | |
| AGTTATTACAGATACGTGAA+GGG | + | tig0019461:133169-133188 | Msa1373710:CDS | 30.0% | |
| TCAAACCATATGGTTAAGAA+AGG | - | tig0019461:133244-133263 | None:intergenic | 30.0% | |
| AATCCTTGATATCATATGCT+TGG | + | tig0019461:133313-133332 | Msa1373710:intron | 30.0% | |
| ! | GTGGATTTTCTTTATTCTCA+AGG | + | tig0019461:133545-133564 | Msa1373710:intron | 30.0% |
| ! | AACACATTAGTCTCAAACAA+CGG | + | tig0019461:133749-133768 | Msa1373710:CDS | 30.0% |
| AATGCATACCTGTATAAGAA+CGG | - | tig0019461:133903-133922 | None:intergenic | 30.0% | |
| GTGAAAAGATACTGAAGTAA+GGG | - | tig0019461:133960-133979 | None:intergenic | 30.0% | |
| !! | TATCTTTCTCTATTTCTGGT+TGG | - | tig0019461:134353-134372 | None:intergenic | 30.0% |
| CCAATATCTTTCTCTATTTC+TGG | - | tig0019461:134357-134376 | None:intergenic | 30.0% | |
| CCAGAAATAGAGAAAGATAT+TGG | + | tig0019461:134354-134373 | Msa1373710:three_prime_UTR | 30.0% | |
| ! | TTTTCAGACAAAACCCACTA+GGG | - | tig0019461:130164-130183 | None:intergenic | 35.0% |
| ! | ATTTTCAGACAAAACCCACT+AGG | - | tig0019461:130165-130184 | None:intergenic | 35.0% |
| !!! | TAGTGGGTTTTGTCTGAAAA+TGG | + | tig0019461:130164-130183 | Msa1373710:CDS | 35.0% |
| GTTATAAGCATGCAAATACC+TGG | - | tig0019461:130436-130455 | None:intergenic | 35.0% | |
| !! | GAAAACGGGTTATTCATAAG+TGG | - | tig0019461:130458-130477 | None:intergenic | 35.0% |
| TGCAGGATAGCTTATGAAAA+CGG | - | tig0019461:130473-130492 | None:intergenic | 35.0% | |
| CTTATTTCCATATGTTCTGC+AGG | - | tig0019461:130490-130509 | None:intergenic | 35.0% | |
| ATATCCATTTATGGCCTACT+TGG | - | tig0019461:130626-130645 | None:intergenic | 35.0% | |
| !! | AAGGTATTGAAAGAGGGTTT+GGG | - | tig0019461:130986-131005 | None:intergenic | 35.0% |
| ! | TCTTTGTTTGAGAGTTTGGA+GGG | - | tig0019461:131106-131125 | None:intergenic | 35.0% |
| ! | ACATGCTCTCTAAAAATGAC+TGG | - | tig0019461:131391-131410 | None:intergenic | 35.0% |
| TTGGCATCATTAATCCTGAA+AGG | + | tig0019461:131504-131523 | Msa1373710:intron | 35.0% | |
| ATCCTGAAAGGTTGAAGTAA+TGG | + | tig0019461:131516-131535 | Msa1373710:intron | 35.0% | |
| TTCCATTACTTCAACCTTTC+AGG | - | tig0019461:131521-131540 | None:intergenic | 35.0% | |
| !!! | GAGGAATTTTATTTTCAGCC+AGG | + | tig0019461:131627-131646 | Msa1373710:intron | 35.0% |
| TTGTTAAAGGAAAAATGGGC+AGG | - | tig0019461:131664-131683 | None:intergenic | 35.0% | |
| !! | ATTTTTGATGGCTGACTTAG+GGG | + | tig0019461:131806-131825 | Msa1373710:intron | 35.0% |
| TTGGAGGCTTCAATAAGAAT+GGG | - | tig0019461:132058-132077 | None:intergenic | 35.0% | |
| TCCACAAATAACATACTTGG+AGG | - | tig0019461:132074-132093 | None:intergenic | 35.0% | |
| GGAAAATGTTGTTGGATTTG+AGG | + | tig0019461:132091-132110 | Msa1373710:CDS | 35.0% | |
| ATGGGATTCCAAACTGTAAA+GGG | - | tig0019461:132290-132309 | None:intergenic | 35.0% | |
| TATGGGATTCCAAACTGTAA+AGG | - | tig0019461:132291-132310 | None:intergenic | 35.0% | |
| ! | AGTTTGGAATCCCATATTCT+AGG | + | tig0019461:132295-132314 | Msa1373710:CDS | 35.0% |
| AATAACGAGGCCTAGAATAT+GGG | - | tig0019461:132308-132327 | None:intergenic | 35.0% | |
| AAATAACGAGGCCTAGAATA+TGG | - | tig0019461:132309-132328 | None:intergenic | 35.0% | |
| CAATCATCTAGGAAAGATGA+CGG | - | tig0019461:132670-132689 | None:intergenic | 35.0% | |
| TTGGAGATTGAATTAGCTGA+CGG | - | tig0019461:132699-132718 | None:intergenic | 35.0% | |
| !! | GCATTTTAATACAGCTTCAC+AGG | + | tig0019461:132732-132751 | Msa1373710:CDS | 35.0% |
| GGAAGATTATTTGTCAGTAG+AGG | + | tig0019461:132753-132772 | Msa1373710:CDS | 35.0% | |
| CGATACAAATGTTGAATCTG+CGG | + | tig0019461:132843-132862 | Msa1373710:CDS | 35.0% | |
| CAAAACCAATTAATGGGGAA+AGG | - | tig0019461:132996-133015 | None:intergenic | 35.0% | |
| ACAACATCTAAGCTCGTTTA+AGG | - | tig0019461:133112-133131 | None:intergenic | 35.0% | |
| AGAAGCCTTTCTTAACCATA+TGG | + | tig0019461:133236-133255 | Msa1373710:intron | 35.0% | |
| TGCGAATACATCAAACCATA+TGG | - | tig0019461:133254-133273 | None:intergenic | 35.0% | |
| CTACCAAGCATATGATATCA+AGG | - | tig0019461:133319-133338 | None:intergenic | 35.0% | |
| ! | CGTAGCGATTCTCATAATTT+TGG | + | tig0019461:133413-133432 | Msa1373710:intron | 35.0% |
| ACACATGCATTCATGTGAAA+GGG | - | tig0019461:133615-133634 | None:intergenic | 35.0% | |
| GTATTTGTCATCCTGTAACT+AGG | + | tig0019461:133684-133703 | Msa1373710:intron | 35.0% | |
| TAAGTTTGCAACCTAGTTAC+AGG | - | tig0019461:133698-133717 | None:intergenic | 35.0% | |
| ! | TGTTTGAGACTAATGTGTTC+TGG | - | tig0019461:133748-133767 | None:intergenic | 35.0% |
| ! | ATTAGTCTCAAACAACGGTA+TGG | + | tig0019461:133754-133773 | Msa1373710:intron | 35.0% |
| CTAACTAATCATGCAAAGCA+GGG | - | tig0019461:133812-133831 | None:intergenic | 35.0% | |
| ACTAACTAATCATGCAAAGC+AGG | - | tig0019461:133813-133832 | None:intergenic | 35.0% | |
| ATAACTCAGCAGTCAACAAA+TGG | - | tig0019461:133837-133856 | None:intergenic | 35.0% | |
| AATAGTCTCCGTTCTTATAC+AGG | + | tig0019461:133892-133911 | Msa1373710:intron | 35.0% | |
| TTATACAGGTATGCATTGCT+AGG | + | tig0019461:133906-133925 | Msa1373710:intron | 35.0% | |
| GGTGAAAAGATACTGAAGTA+AGG | - | tig0019461:133961-133980 | None:intergenic | 35.0% | |
| ATCGAAAAATCACCAAGCTT+CGG | - | tig0019461:133982-134001 | None:intergenic | 35.0% | |
| !! | GTTGCTGTTTCAATCAACTA+TGG | + | tig0019461:134087-134106 | Msa1373710:three_prime_UTR | 35.0% |
| AAACATTCTAACTCGTGCAA+GGG | - | tig0019461:134121-134140 | None:intergenic | 35.0% | |
| AAAACATTCTAACTCGTGCA+AGG | - | tig0019461:134122-134141 | None:intergenic | 35.0% | |
| TGCACAATTGAAGGTAAAAG+AGG | + | tig0019461:134300-134319 | Msa1373710:three_prime_UTR | 35.0% | |
| ! | GATGAAAGCACAAGTAAACG+CGG | + | tig0019461:130337-130356 | Msa1373710:CDS | 40.0% |
| AGCATGCAAATACCTGGTAA+GGG | - | tig0019461:130430-130449 | None:intergenic | 40.0% | |
| AAGCATGCAAATACCTGGTA+AGG | - | tig0019461:130431-130450 | None:intergenic | 40.0% | |
| GCAGGATAGCTTATGAAAAC+GGG | - | tig0019461:130472-130491 | None:intergenic | 40.0% | |
| AAGCTATCCTGCAGAACATA+TGG | + | tig0019461:130480-130499 | Msa1373710:intron | 40.0% | |
| CATTTATGGCCTACTTGGAT+TGG | - | tig0019461:130621-130640 | None:intergenic | 40.0% | |
| CAATCCAAGTAGGCCATAAA+TGG | + | tig0019461:130619-130638 | Msa1373710:intron | 40.0% | |
| !!! | TTTTGGTCTTGGGCTTTGTT+TGG | + | tig0019461:130761-130780 | Msa1373710:intron | 40.0% |
| !! | TTTGGTCTTGGGCTTTGTTT+GGG | + | tig0019461:130762-130781 | Msa1373710:intron | 40.0% |
| !! | TTTTGGGGGTGGGAAATATA+GGG | + | tig0019461:130811-130830 | Msa1373710:intron | 40.0% |
| !! | AGGTATTGAAAGAGGGTTTG+GGG | - | tig0019461:130985-131004 | None:intergenic | 40.0% |
| !! | CAAGGTATTGAAAGAGGGTT+TGG | - | tig0019461:130987-131006 | None:intergenic | 40.0% |
| GAAAAAAAGGAAGGAGCAAG+CGG | - | tig0019461:131059-131078 | None:intergenic | 40.0% | |
| GAGGGTTTGGAAAAAAAGGA+AGG | - | tig0019461:131068-131087 | None:intergenic | 40.0% | |
| TTTGAGAGTTTGGAGGGAAA+GGG | - | tig0019461:131100-131119 | None:intergenic | 40.0% | |
| ! | GTCTTTGTTTGAGAGTTTGG+AGG | - | tig0019461:131107-131126 | None:intergenic | 40.0% |
| AAAGACTTAGGCCCTGTTAA+GGG | + | tig0019461:131121-131140 | Msa1373710:intron | 40.0% | |
| TAAGCAGTATGCCCTTAACA+GGG | - | tig0019461:131135-131154 | None:intergenic | 40.0% | |
| ATAAGCAGTATGCCCTTAAC+AGG | - | tig0019461:131136-131155 | None:intergenic | 40.0% | |
| CGACCAATGACCAACAAAAA+TGG | - | tig0019461:131264-131283 | None:intergenic | 40.0% | |
| TTTGTTGGTCATTGGTCGTT+TGG | + | tig0019461:131266-131285 | Msa1373710:intron | 40.0% | |
| ATTTGTAGGGTGGACAATTG+TGG | - | tig0019461:131695-131714 | None:intergenic | 40.0% | |
| CCTGGCTGACAATATTTGTA+GGG | - | tig0019461:131708-131727 | None:intergenic | 40.0% | |
| TCCTGGCTGACAATATTTGT+AGG | - | tig0019461:131709-131728 | None:intergenic | 40.0% | |
| CTTGGAGGCTTCAATAAGAA+TGG | - | tig0019461:132059-132078 | None:intergenic | 40.0% | |
| ! | GCCTCCAAGTATGTTATTTG+TGG | + | tig0019461:132070-132089 | Msa1373710:CDS | 40.0% |
| TAACTCTTCTGTGTCCTTTC+TGG | + | tig0019461:132184-132203 | Msa1373710:intron | 40.0% | |
| ATTCTGAGCCCTTTACAGTT+TGG | + | tig0019461:132279-132298 | Msa1373710:CDS | 40.0% | |
| !!! | TAGGCCTCGTTATTTTTGTC+TGG | + | tig0019461:132314-132333 | Msa1373710:CDS | 40.0% |
| CTCACCAGACAAAAATAACG+AGG | - | tig0019461:132321-132340 | None:intergenic | 40.0% | |
| ! | TGAAGGAATCAATTGGTGTC+AGG | + | tig0019461:132420-132439 | Msa1373710:intron | 40.0% |
| ! | TTTTTGCTGCTGGGTCTTAA+AGG | + | tig0019461:132491-132510 | Msa1373710:intron | 40.0% |
| ATATCACACACTCAGCCAAA+AGG | - | tig0019461:132608-132627 | None:intergenic | 40.0% | |
| GACGGTTGAAACAATCATCT+AGG | - | tig0019461:132681-132700 | None:intergenic | 40.0% | |
| TCAACATTTGTATCGCTGCT+AGG | - | tig0019461:132838-132857 | None:intergenic | 40.0% | |
| !! | AGAAGTGTCATTAGACAGAC+TGG | - | tig0019461:132878-132897 | None:intergenic | 40.0% |
| AGAACTTCAGAGACAGATGA+TGG | + | tig0019461:132898-132917 | Msa1373710:CDS | 40.0% | |
| GGTATCCTTTCCCCATTAAT+TGG | + | tig0019461:132988-133007 | Msa1373710:intron | 40.0% | |
| AACCTGAACAGTAGCCAAAA+GGG | - | tig0019461:133203-133222 | None:intergenic | 40.0% | |
| TAACCTGAACAGTAGCCAAA+AGG | - | tig0019461:133204-133223 | None:intergenic | 40.0% | |
| !! | TTTTGGCTACTGTTCAGGTT+AGG | + | tig0019461:133203-133222 | Msa1373710:intron | 40.0% |
| TAGATACTTTACACCGAGAG+AGG | + | tig0019461:133519-133538 | Msa1373710:CDS | 40.0% | |
| GACACATGCATTCATGTGAA+AGG | - | tig0019461:133616-133635 | None:intergenic | 40.0% | |
| TCTGGAAACTCGAAATCTTC+AGG | - | tig0019461:133730-133749 | None:intergenic | 40.0% | |
| ! | TGTTGACTGCTGAGTTATGT+TGG | + | tig0019461:133839-133858 | Msa1373710:intron | 40.0% |
| ! | AGTATCTTTTCACCGAAGCT+TGG | + | tig0019461:133967-133986 | Msa1373710:CDS | 40.0% |
| TATCGTTGCATGATACTCAC+AGG | - | tig0019461:134040-134059 | None:intergenic | 40.0% | |
| ATCATGTAACACAATGCCGT+GGG | + | tig0019461:134065-134084 | Msa1373710:three_prime_UTR | 40.0% | |
| TTGATTGAAACAGCAACCCA+CGG | - | tig0019461:134084-134103 | None:intergenic | 40.0% | |
| GAACACAACACAACCCTAGT+GGG | + | tig0019461:130148-130167 | Msa1373710:CDS | 45.0% | |
| AGAGTTCTCGAGTTCTACAG+CGG | + | tig0019461:130201-130220 | Msa1373710:CDS | 45.0% | |
| !! | TTGGGCTTTGTTTGGGAGTT+TGG | + | tig0019461:130769-130788 | Msa1373710:intron | 45.0% |
| !!! | GTTTTGGGGGTGGGAAATAT+AGG | + | tig0019461:130810-130829 | Msa1373710:intron | 45.0% |
| TTTGGGGGTGGGAAATATAG+GGG | + | tig0019461:130812-130831 | Msa1373710:intron | 45.0% | |
| GTGGGAAATATAGGGGGAAA+TGG | + | tig0019461:130819-130838 | Msa1373710:intron | 45.0% | |
| TATTGAAAGAGGGTTTGGGG+GGG | - | tig0019461:130982-131001 | None:intergenic | 45.0% | |
| GTATTGAAAGAGGGTTTGGG+GGG | - | tig0019461:130983-131002 | None:intergenic | 45.0% | |
| ! | GGTATTGAAAGAGGGTTTGG+GGG | - | tig0019461:130984-131003 | None:intergenic | 45.0% |
| AGGGGAGGGTTTGGAAAAAA+AGG | - | tig0019461:131072-131091 | None:intergenic | 45.0% | |
| GTTTGAGAGTTTGGAGGGAA+AGG | - | tig0019461:131101-131120 | None:intergenic | 45.0% | |
| CAAAGACTTAGGCCCTGTTA+AGG | + | tig0019461:131120-131139 | Msa1373710:intron | 45.0% | |
| TTGAGCTCACAGCTTGTATC+AGG | - | tig0019461:131217-131236 | None:intergenic | 45.0% | |
| GTTTCCCTGGTCATAACAGA+AGG | + | tig0019461:131337-131356 | Msa1373710:intron | 45.0% | |
| TGCTTGGACTCAGCCAATTA+AGG | - | tig0019461:131545-131564 | None:intergenic | 45.0% | |
| GGCTGACAATATTTGTAGGG+TGG | - | tig0019461:131705-131724 | None:intergenic | 45.0% | |
| CCCTACAAATATTGTCAGCC+AGG | + | tig0019461:131705-131724 | Msa1373710:intron | 45.0% | |
| !! | ACAAATATGGTGCCGATGCA+TGG | + | tig0019461:131860-131879 | Msa1373710:CDS | 45.0% |
| AATTCACCTTGTCGCGTGTA+AGG | - | tig0019461:131907-131926 | None:intergenic | 45.0% | |
| TCTTGTGTTAGGTCTCCAGA+AGG | + | tig0019461:131983-132002 | Msa1373710:intron | 45.0% | |
| TCAGATGTCTGTAGCCAGAA+AGG | - | tig0019461:132201-132220 | None:intergenic | 45.0% | |
| ACTGATAGTCAGGGCAAAAG+CGG | + | tig0019461:132529-132548 | Msa1373710:intron | 45.0% | |
| !! | TTCACCCAAGCTTGTTAGAG+AGG | + | tig0019461:132950-132969 | Msa1373710:CDS | 45.0% |
| TACAGATACGTGAAGGGAAC+TGG | + | tig0019461:133175-133194 | Msa1373710:CDS | 45.0% | |
| ! | GATGTTTTGTCCCTCTTCAC+TGG | - | tig0019461:133481-133500 | None:intergenic | 45.0% |
| GAGGGACAAAACATCACTCA+AGG | + | tig0019461:133486-133505 | Msa1373710:CDS | 45.0% | |
| GAAAATCCACTCACCTCTCT+CGG | - | tig0019461:133535-133554 | None:intergenic | 45.0% | |
| ! | ACAACGGTATGGCATTTTGC+TGG | + | tig0019461:133765-133784 | Msa1373710:intron | 45.0% |
| GATCATGTAACACAATGCCG+TGG | + | tig0019461:134064-134083 | Msa1373710:three_prime_UTR | 45.0% | |
| CGAACACAACACAACCCTAG+TGG | + | tig0019461:130147-130166 | Msa1373710:CDS | 50.0% | |
| CTCGAGTTCTACAGCGGTAT+CGG | + | tig0019461:130207-130226 | Msa1373710:CDS | 50.0% | |
| ! | CTTTTCTCATCGCCCTTACC+AGG | + | tig0019461:130415-130434 | Msa1373710:intron | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | tig0019461:130772-130791 | Msa1373710:intron | 50.0% |
| TGTTTGGGAGTTTGGAGGAG+AGG | + | tig0019461:130777-130796 | Msa1373710:intron | 50.0% | |
| ! | AGAGGAGAGGGGATGGTTTT+GGG | + | tig0019461:130795-130814 | Msa1373710:intron | 50.0% |
| TTGGGGGTGGGAAATATAGG+GGG | + | tig0019461:130813-130832 | Msa1373710:intron | 50.0% | |
| GAGTTTGGAGGGAAAGGGAA+GGG | - | tig0019461:131095-131114 | None:intergenic | 50.0% | |
| AGAGTTTGGAGGGAAAGGGA+AGG | - | tig0019461:131096-131115 | None:intergenic | 50.0% | |
| TCCCTGGTCATAACAGAAGG+TGG | + | tig0019461:131340-131359 | Msa1373710:intron | 50.0% | |
| CCCACCTTCTGTTATGACCA+GGG | - | tig0019461:131344-131363 | None:intergenic | 50.0% | |
| CCCTGGTCATAACAGAAGGT+GGG | + | tig0019461:131341-131360 | Msa1373710:intron | 50.0% | |
| ACCCACCTTCTGTTATGACC+AGG | - | tig0019461:131345-131364 | None:intergenic | 50.0% | |
| TTAGGTCTCCAGAAGGACAC+TGG | + | tig0019461:131990-132009 | Msa1373710:intron | 50.0% | |
| ! | AGAAGGACACTGGTGATGCA+CGG | + | tig0019461:132000-132019 | Msa1373710:CDS | 50.0% |
| !! | ACCCAAGCTTGTTAGAGAGG+TGG | + | tig0019461:132953-132972 | Msa1373710:CDS | 50.0% |
| CCCACCTCTCTAACAAGCTT+GGG | - | tig0019461:132957-132976 | None:intergenic | 50.0% | |
| !! | CCCAAGCTTGTTAGAGAGGT+GGG | + | tig0019461:132954-132973 | Msa1373710:CDS | 50.0% |
| !! | CCAAGCTTGTTAGAGAGGTG+GGG | + | tig0019461:132955-132974 | Msa1373710:CDS | 50.0% |
| !! | CAAGCTTGTTAGAGAGGTGG+GGG | + | tig0019461:132956-132975 | Msa1373710:CDS | 50.0% |
| !! | CTCCCTTTTGGCTACTGTTC+AGG | + | tig0019461:133198-133217 | Msa1373710:CDS | 50.0% |
| ! | TCTTCACTGGCTGCACATTG+AGG | - | tig0019461:133468-133487 | None:intergenic | 50.0% |
| TCAATGTGCAGCCAGTGAAG+AGG | + | tig0019461:133467-133486 | Msa1373710:intron | 50.0% | |
| CAATGTGCAGCCAGTGAAGA+GGG | + | tig0019461:133468-133487 | Msa1373710:intron | 50.0% | |
| TTTACACCGAGAGAGGTGAG+TGG | + | tig0019461:133526-133545 | Msa1373710:intron | 50.0% | |
| ! | GAGTTCTACAGCGGTATCGG+TGG | + | tig0019461:130210-130229 | Msa1373710:CDS | 55.0% |
| GGAGTTTGGAGGAGAGGAGA+GGG | + | tig0019461:130783-130802 | Msa1373710:intron | 55.0% | |
| GAGTTTGGAGGAGAGGAGAG+GGG | + | tig0019461:130784-130803 | Msa1373710:intron | 55.0% | |
| ! | GAGAGGAGAGGGGATGGTTT+TGG | + | tig0019461:130794-130813 | Msa1373710:intron | 55.0% |
| !! | GAGGAGAGGGGATGGTTTTG+GGG | + | tig0019461:130796-130815 | Msa1373710:intron | 55.0% |
| !!! | AGGAGAGGGGATGGTTTTGG+GGG | + | tig0019461:130797-130816 | Msa1373710:intron | 55.0% |
| ! | AAGAGGGTTTGGGGGGGTTT+TGG | - | tig0019461:130976-130995 | None:intergenic | 55.0% |
| TTGGAGGGAAAGGGAAGGGA+GGG | - | tig0019461:131091-131110 | None:intergenic | 55.0% | |
| TTTGGAGGGAAAGGGAAGGG+AGG | - | tig0019461:131092-131111 | None:intergenic | 55.0% | |
| AGGGGAAAGGAGCCATGCAT+CGG | - | tig0019461:131875-131894 | None:intergenic | 55.0% | |
| TGTCGCGTGTAAGGTTGGCA+GGG | - | tig0019461:131898-131917 | None:intergenic | 55.0% | |
| TTGTCGCGTGTAAGGTTGGC+AGG | - | tig0019461:131899-131918 | None:intergenic | 55.0% | |
| TGCCAACCTTACACGCGACA+AGG | + | tig0019461:131898-131917 | Msa1373710:CDS | 55.0% | |
| CACCTTGTCGCGTGTAAGGT+TGG | - | tig0019461:131903-131922 | None:intergenic | 55.0% | |
| GTGCATCACCAGTGTCCTTC+TGG | - | tig0019461:132001-132020 | None:intergenic | 55.0% | |
| ! | GAAGGACACTGGTGATGCAC+GGG | + | tig0019461:132001-132020 | Msa1373710:CDS | 55.0% |
| CCCCACCTCTCTAACAAGCT+TGG | - | tig0019461:132958-132977 | None:intergenic | 55.0% | |
| ! | CAGCAGCAGCGCTTTGAATC+AGG | - | tig0019461:133139-133158 | None:intergenic | 55.0% |
| !! | GAAGGGAACTGGCTCCCTTT+TGG | + | tig0019461:133186-133205 | Msa1373710:CDS | 55.0% |
| !! | CTACAGCGGTATCGGTGGCA+TGG | + | tig0019461:130215-130234 | Msa1373710:CDS | 60.0% |
| GGGAGTTTGGAGGAGAGGAG+AGG | + | tig0019461:130782-130801 | Msa1373710:intron | 60.0% | |
| TTGGAGGAGAGGAGAGGGGA+TGG | + | tig0019461:130788-130807 | Msa1373710:intron | 60.0% | |
| !!! | AGAGGGGATGGTTTTGGGGG+TGG | + | tig0019461:130800-130819 | Msa1373710:intron | 60.0% |
| !!! | GAGGGGATGGTTTTGGGGGT+GGG | + | tig0019461:130801-130820 | Msa1373710:intron | 60.0% |
| !!! | GGGTTTGGGGGGGTTTTGGA+GGG | - | tig0019461:130972-130991 | None:intergenic | 60.0% |
| !! | AGGGTTTGGGGGGGTTTTGG+AGG | - | tig0019461:130973-130992 | None:intergenic | 60.0% |
| TGGAGGGAAAGGGAAGGGAG+GGG | - | tig0019461:131090-131109 | None:intergenic | 60.0% | |
| GGGCAGGATGTGATGCTTCC+TGG | - | tig0019461:131648-131667 | None:intergenic | 60.0% | |
| AAGGTTGGCAGGGAGGGGAA+AGG | - | tig0019461:131888-131907 | None:intergenic | 60.0% | |
| CGTGTAAGGTTGGCAGGGAG+GGG | - | tig0019461:131893-131912 | None:intergenic | 60.0% | |
| GCGTGTAAGGTTGGCAGGGA+GGG | - | tig0019461:131894-131913 | None:intergenic | 60.0% | |
| !! | AGAGAGGTGGGGGAGTGCTA+TGG | + | tig0019461:132966-132985 | Msa1373710:CDS | 60.0% |
| !! | GAGAGGTGGGGGAGTGCTAT+GGG | + | tig0019461:132967-132986 | Msa1373710:CDS | 60.0% |
| AGGGAAGGGAGGGGAGGGTT+TGG | - | tig0019461:131081-131100 | None:intergenic | 65.0% | |
| GGGAAAGGGAAGGGAGGGGA+GGG | - | tig0019461:131086-131105 | None:intergenic | 65.0% | |
| AGGGAAAGGGAAGGGAGGGG+AGG | - | tig0019461:131087-131106 | None:intergenic | 65.0% | |
| CGCGTGTAAGGTTGGCAGGG+AGG | - | tig0019461:131895-131914 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019461 | gene | 130090 | 134402 | 130090 | ID=Msa1373710;Name=Msa1373710 |
| tig0019461 | mRNA | 130090 | 134402 | 130090 | ID=Msa1373710-mRNA-1;Parent=Msa1373710;Name=Msa1373710-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.8|0.63|1|0.8|0.72|11|410|394 |
| tig0019461 | exon | 130090 | 130236 | 130090 | ID=Msa1373710-mRNA-1:exon:3420;Parent=Msa1373710-mRNA-1 |
| tig0019461 | exon | 130326 | 130400 | 130326 | ID=Msa1373710-mRNA-1:exon:3421;Parent=Msa1373710-mRNA-1 |
| tig0019461 | exon | 131826 | 131919 | 131826 | ID=Msa1373710-mRNA-1:exon:3422;Parent=Msa1373710-mRNA-1 |
| tig0019461 | exon | 131994 | 132112 | 131994 | ID=Msa1373710-mRNA-1:exon:3423;Parent=Msa1373710-mRNA-1 |
| tig0019461 | exon | 132213 | 132335 | 132213 | ID=Msa1373710-mRNA-1:exon:3424;Parent=Msa1373710-mRNA-1 |
| tig0019461 | exon | 132655 | 132822 | 132655 | ID=Msa1373710-mRNA-1:exon:3425;Parent=Msa1373710-mRNA-1 |
| tig0019461 | exon | 132832 | 132988 | 132832 | ID=Msa1373710-mRNA-1:exon:3426;Parent=Msa1373710-mRNA-1 |
| tig0019461 | exon | 133125 | 133219 | 133125 | ID=Msa1373710-mRNA-1:exon:3427;Parent=Msa1373710-mRNA-1 |
| tig0019461 | exon | 133478 | 133540 | 133478 | ID=Msa1373710-mRNA-1:exon:3428;Parent=Msa1373710-mRNA-1 |
| tig0019461 | exon | 133706 | 133770 | 133706 | ID=Msa1373710-mRNA-1:exon:3429;Parent=Msa1373710-mRNA-1 |
| tig0019461 | exon | 133914 | 134402 | 133914 | ID=Msa1373710-mRNA-1:exon:3430;Parent=Msa1373710-mRNA-1 |
| tig0019461 | CDS | 130090 | 130236 | 130090 | ID=Msa1373710-mRNA-1:cds;Parent=Msa1373710-mRNA-1 |
| tig0019461 | CDS | 130326 | 130400 | 130326 | ID=Msa1373710-mRNA-1:cds;Parent=Msa1373710-mRNA-1 |
| tig0019461 | CDS | 131826 | 131919 | 131826 | ID=Msa1373710-mRNA-1:cds;Parent=Msa1373710-mRNA-1 |
| tig0019461 | CDS | 131994 | 132112 | 131994 | ID=Msa1373710-mRNA-1:cds;Parent=Msa1373710-mRNA-1 |
| tig0019461 | CDS | 132213 | 132335 | 132213 | ID=Msa1373710-mRNA-1:cds;Parent=Msa1373710-mRNA-1 |
| tig0019461 | CDS | 132655 | 132822 | 132655 | ID=Msa1373710-mRNA-1:cds;Parent=Msa1373710-mRNA-1 |
| tig0019461 | CDS | 132832 | 132988 | 132832 | ID=Msa1373710-mRNA-1:cds;Parent=Msa1373710-mRNA-1 |
| tig0019461 | CDS | 133125 | 133219 | 133125 | ID=Msa1373710-mRNA-1:cds;Parent=Msa1373710-mRNA-1 |
| tig0019461 | CDS | 133478 | 133540 | 133478 | ID=Msa1373710-mRNA-1:cds;Parent=Msa1373710-mRNA-1 |
| tig0019461 | CDS | 133706 | 133770 | 133706 | ID=Msa1373710-mRNA-1:cds;Parent=Msa1373710-mRNA-1 |
| tig0019461 | CDS | 133914 | 133992 | 133914 | ID=Msa1373710-mRNA-1:cds;Parent=Msa1373710-mRNA-1 |
| tig0019461 | three_prime_UTR | 133993 | 134402 | 133993 | ID=Msa1373710-mRNA-1:three_prime_utr;Parent=Msa1373710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
