Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982000 | XP_003593226.1 | 95.767 | 378 | 15 | 1 | 1 | 377 | 1 | 378 | 0.0 | 749 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982000 | sp|F4JWT7|TRDMT_ARATH | 66.400 | 375 | 118 | 3 | 3 | 374 | 12 | 381 | 2.31e-178 | 503 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982000 | G7IPK4 | 95.767 | 378 | 15 | 1 | 1 | 377 | 1 | 378 | 0.0 | 749 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0982000 | Msa1373710 | 0.981755 | 2.276980e-153 | -8.615850e-47 |
| Msa0351980 | Msa0982000 | 0.800059 | 1.721625e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982000 | MtrunA17_Chr2g0279341 | 95.767 | 378 | 15 | 1 | 1 | 377 | 1 | 378 | 0.0 | 749 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982000 | AT5G25480.1 | 66.400 | 375 | 118 | 3 | 3 | 374 | 12 | 381 | 2.35e-179 | 503 |
Find 88 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATATCTTTCTCTATTTC+TGG | 0.065119 | 6_4:-21613311 | None:intergenic |
| AAATAACGAGGCCTAGAATA+TGG | 0.229617 | 6_4:-21611263 | None:intergenic |
| TATAATTTGAAGTTTGTAAT+AGG | 0.242503 | 6_4:+21613159 | Msa0982000:three_prime_UTR |
| AGTTTGGAATCCCATATTCT+AGG | 0.286309 | 6_4:+21611252 | Msa0982000:CDS |
| TGCAAAACTGATTGAAATAC+TGG | 0.300711 | 6_4:+21611184 | Msa0982000:CDS |
| CACGTATCTGTAATAACTTT+TGG | 0.314998 | 6_4:-21612121 | None:intergenic |
| GTGCATCACCAGTGTCCTTC+TGG | 0.317578 | 6_4:-21610955 | None:intergenic |
| CAGCAGCAGCGCTTTGAATC+AGG | 0.349206 | 6_4:-21612093 | None:intergenic |
| ATTCTGAGCCCTTTACAGTT+TGG | 0.358939 | 6_4:+21611236 | Msa0982000:CDS |
| TGTTTGAGACTAATGTGTTC+TGG | 0.361567 | 6_4:-21612702 | None:intergenic |
| GAAGGGAACTGGCTCCCTTT+TGG | 0.367037 | 6_4:+21612143 | Msa0982000:CDS |
| TCTGGAAACTCGAAATCTTC+AGG | 0.368546 | 6_4:-21612684 | None:intergenic |
| GTTACTGATCTAGACAAATA+TGG | 0.372242 | 6_4:+21610804 | Msa0982000:CDS |
| GTATTAAAATGCTCAAATAA+TGG | 0.376128 | 6_4:-21611678 | None:intergenic |
| CCAGAAATAGAGAAAGATAT+TGG | 0.386497 | 6_4:+21613311 | Msa0982000:three_prime_UTR |
| AAATGCTCAAATAATGGTCT+TGG | 0.396371 | 6_4:-21611672 | None:intergenic |
| GCCTCCAAGTATGTTATTTG+TGG | 0.408200 | 6_4:+21611027 | Msa0982000:CDS |
| GGAAAATGTTGTTGGATTTG+AGG | 0.425798 | 6_4:+21611048 | Msa0982000:CDS |
| AATTTATAATGCACAATTGA+AGG | 0.426147 | 6_4:+21613248 | Msa0982000:three_prime_UTR |
| GCGTGTAAGGTTGGCAGGGA+GGG | 0.426988 | 6_4:-21610848 | None:intergenic |
| GTTGCTGTTTCAATCAACTA+TGG | 0.428731 | 6_4:+21613044 | Msa0982000:three_prime_UTR |
| TTGTCGCGTGTAAGGTTGGC+AGG | 0.429390 | 6_4:-21610853 | None:intergenic |
| CTCGAGTTCTACAGCGGTAT+CGG | 0.430262 | 6_4:+21609182 | Msa0982000:CDS |
| CTTGGAGGCTTCAATAAGAA+TGG | 0.435590 | 6_4:-21611013 | None:intergenic |
| TACAGATACGTGAAGGGAAC+TGG | 0.437473 | 6_4:+21612132 | Msa0982000:CDS |
| AATTCACCTTGTCGCGTGTA+AGG | 0.443007 | 6_4:-21610861 | None:intergenic |
| ATGGGATTCCAAACTGTAAA+GGG | 0.446915 | 6_4:-21611244 | None:intergenic |
| TTATTTGTGGAAAATGTTGT+TGG | 0.449545 | 6_4:+21611040 | Msa0982000:CDS |
| CCCAAGCTTGTTAGAGAGGT+GGG | 0.452713 | 6_4:+21611911 | Msa0982000:CDS |
| CCCACCTCTCTAACAAGCTT+GGG | 0.456097 | 6_4:-21611911 | None:intergenic |
| CCCCACCTCTCTAACAAGCT+TGG | 0.458339 | 6_4:-21611912 | None:intergenic |
| CGTGTAAGGTTGGCAGGGAG+GGG | 0.463425 | 6_4:-21610847 | None:intergenic |
| GGTGAAAAGATACTGAAGTA+AGG | 0.463425 | 6_4:-21612915 | None:intergenic |
| AAGCATGCACATACCTGATA+AGG | 0.464334 | 6_4:-21609403 | None:intergenic |
| AATAACGAGGCCTAGAATAT+GGG | 0.473801 | 6_4:-21611262 | None:intergenic |
| TATCTTTCTCTATTTCTGGT+TGG | 0.477769 | 6_4:-21613307 | None:intergenic |
| TAACCTGAACAGTAGCCAAA+AGG | 0.481527 | 6_4:-21612158 | None:intergenic |
| AATACGATAAATTTCTCGAT+AGG | 0.489468 | 6_4:-21611762 | None:intergenic |
| TCCACAAATAACATACTTGG+AGG | 0.496061 | 6_4:-21611028 | None:intergenic |
| TGCACAATTGAAGGTAAAAG+AGG | 0.508971 | 6_4:+21613257 | Msa0982000:three_prime_UTR |
| CGCGTGTAAGGTTGGCAGGG+AGG | 0.510952 | 6_4:-21610849 | None:intergenic |
| ACAAATATGGTGCCGATGCA+TGG | 0.512998 | 6_4:+21610817 | Msa0982000:CDS |
| TTATACAGGTATGCATTGCT+AGG | 0.513797 | 6_4:+21612863 | Msa0982000:intron |
| CACCTTGTCGCGTGTAAGGT+TGG | 0.514669 | 6_4:-21610857 | None:intergenic |
| TTGGAGGCTTCAATAAGAAT+GGG | 0.517752 | 6_4:-21611012 | None:intergenic |
| AACCTGAACAGTAGCCAAAA+GGG | 0.519050 | 6_4:-21612157 | None:intergenic |
| GAAAATCCACTCACCTCTCT+CGG | 0.520162 | 6_4:-21612489 | None:intergenic |
| TCAACATTTGTATCGCTGCT+AGG | 0.523945 | 6_4:-21611792 | None:intergenic |
| AGGGGAAAGGAGCCATGCAT+CGG | 0.524990 | 6_4:-21610829 | None:intergenic |
| TATGGGATTCCAAACTGTAA+AGG | 0.527620 | 6_4:-21611245 | None:intergenic |
| GACGGTTGAAACAATCATCT+AGG | 0.536060 | 6_4:-21611635 | None:intergenic |
| ACCCAAGCTTGTTAGAGAGG+TGG | 0.544940 | 6_4:+21611910 | Msa0982000:CDS |
| AGAAGTGTCATTAGACAGAC+TGG | 0.546890 | 6_4:-21611832 | None:intergenic |
| GAAGGACACTGGTGATGCAC+GGG | 0.555849 | 6_4:+21610958 | Msa0982000:CDS |
| GTGAAAAGATACTGAAGTAA+GGG | 0.557005 | 6_4:-21612914 | None:intergenic |
| TTCACCCAAGCTTGTTAGAG+AGG | 0.557897 | 6_4:+21611907 | Msa0982000:CDS |
| AGAAGGACACTGGTGATGCA+CGG | 0.562723 | 6_4:+21610957 | Msa0982000:CDS |
| CAATGTGCAGCCAGTGAAGA+GGG | 0.564602 | 6_4:+21612425 | Msa0982000:intron |
| GGAAGATTATTTGTCAGTAG+AGG | 0.565298 | 6_4:+21611710 | Msa0982000:CDS |
| AGAACTTCAGAGACAGATGA+TGG | 0.569015 | 6_4:+21611855 | Msa0982000:CDS |
| CAAGCTTGTTAGAGAGGTGG+GGG | 0.569417 | 6_4:+21611913 | Msa0982000:CDS |
| AAAACATTCTAACTCGTGCA+AGG | 0.584886 | 6_4:-21613076 | None:intergenic |
| TAGATACTTTACACCGAGAG+AGG | 0.595625 | 6_4:+21612476 | Msa0982000:CDS |
| CCAAGCTTGTTAGAGAGGTG+GGG | 0.595655 | 6_4:+21611912 | Msa0982000:CDS |
| TGCCAACCTTACACGCGACA+AGG | 0.596230 | 6_4:+21610855 | Msa0982000:CDS |
| CTACAGCGGTATCGGTGGCA+TGG | 0.599145 | 6_4:+21609190 | Msa0982000:CDS |
| AAGGTTGGCAGGGAGGGGAA+AGG | 0.599157 | 6_4:-21610842 | None:intergenic |
| TTGGAGATTGAATTAGCTGA+CGG | 0.599184 | 6_4:-21611653 | None:intergenic |
| CGATACAAATGTTGAATCTG+CGG | 0.601690 | 6_4:+21611800 | Msa0982000:CDS |
| AAGTTATTACAGATACGTGA+AGG | 0.604612 | 6_4:+21612125 | Msa0982000:CDS |
| GAGTTCTACAGCGGTATCGG+TGG | 0.608979 | 6_4:+21609185 | Msa0982000:CDS |
| TTAGGTCTCCAGAAGGACAC+TGG | 0.610942 | 6_4:+21610947 | Msa0982000:intron |
| TATCGTTGCATGATACTCAC+AGG | 0.611617 | 6_4:-21612994 | None:intergenic |
| GAGGGACAAAACATCACTCA+AGG | 0.613161 | 6_4:+21612443 | Msa0982000:CDS |
| AACACATTAGTCTCAAACAA+CGG | 0.619587 | 6_4:+21612706 | Msa0982000:CDS |
| TCAATGTGCAGCCAGTGAAG+AGG | 0.620502 | 6_4:+21612424 | Msa0982000:intron |
| AAACATTCTAACTCGTGCAA+GGG | 0.622838 | 6_4:-21613075 | None:intergenic |
| CGAACACAACACAACCCTAG+TGG | 0.628364 | 6_4:+21609122 | Msa0982000:five_prime_UTR |
| GATCATGTAACACAATGCCG+TGG | 0.632546 | 6_4:+21613021 | Msa0982000:three_prime_UTR |
| CAATCATCTAGGAAAGATGA+CGG | 0.637065 | 6_4:-21611624 | None:intergenic |
| GAACACAACACAACCCTAGT+GGG | 0.639261 | 6_4:+21609123 | Msa0982000:five_prime_UTR |
| TGTCGCGTGTAAGGTTGGCA+GGG | 0.643675 | 6_4:-21610852 | None:intergenic |
| AGTTATTACAGATACGTGAA+GGG | 0.649697 | 6_4:+21612126 | Msa0982000:CDS |
| TTGATTGAAACAGCAACCCA+CGG | 0.660382 | 6_4:-21613038 | None:intergenic |
| TCTTGTGTTAGGTCTCCAGA+AGG | 0.665235 | 6_4:+21610940 | Msa0982000:intron |
| ATCATGTAACACAATGCCGT+GGG | 0.712509 | 6_4:+21613022 | Msa0982000:three_prime_UTR |
| AGAGTTCTCGAGTTCTACAG+CGG | 0.727673 | 6_4:+21609176 | Msa0982000:CDS |
| GATGAAAGCACAAGTAAACG+CGG | 0.746091 | 6_4:+21609312 | Msa0982000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGATTGATATATAAATAA+TGG | - | chr6_4:21609222-21609241 | None:intergenic | 10.0% |
| !! | TTAAAAGTTAAAAATAACAA+AGG | - | chr6_4:21609637-21609656 | None:intergenic | 10.0% |
| !! | CAATTATTGAAATTAGAAAT+TGG | - | chr6_4:21609250-21609269 | None:intergenic | 15.0% |
| !!! | TTTTAACTTTTAAGCTATTT+TGG | + | chr6_4:21609644-21609663 | Msa0982000:intron | 15.0% |
| !! | AAAAAAAAAAAGACATAACA+AGG | - | chr6_4:21609961-21609980 | None:intergenic | 15.0% |
| !!! | ATATTTGTTAAAGGAAAAAT+GGG | - | chr6_4:21610625-21610644 | None:intergenic | 15.0% |
| !!! | AATATTTGTTAAAGGAAAAA+TGG | - | chr6_4:21610626-21610645 | None:intergenic | 15.0% |
| !!! | TGAAGAATTATTTTTTTCTT+GGG | - | chr6_4:21612020-21612039 | None:intergenic | 15.0% |
| !!! | TTGAAGAATTATTTTTTTCT+TGG | - | chr6_4:21612021-21612040 | None:intergenic | 15.0% |
| !!! | TATAATTTGAAGTTTGTAAT+AGG | + | chr6_4:21613159-21613178 | Msa0982000:three_prime_UTR | 15.0% |
| !!! | ATTAATTACTTTTGATAAGT+TGG | + | chr6_4:21613281-21613300 | Msa0982000:three_prime_UTR | 15.0% |
| !! | ATAGATAGATAATTGATAAG+TGG | - | chr6_4:21609437-21609456 | None:intergenic | 20.0% |
| !!! | CATGATAAAATCCATATTTT+TGG | - | chr6_4:21609697-21609716 | None:intergenic | 20.0% |
| !!! | ATATGGATTTTATCATGTTT+TGG | + | chr6_4:21609700-21609719 | Msa0982000:intron | 20.0% |
| !!! | ACATAATAAACCATTTTTGT+TGG | + | chr6_4:21610208-21610227 | Msa0982000:intron | 20.0% |
| !!! | TTTTGTCGTAATATTTATCT+TGG | + | chr6_4:21610429-21610448 | Msa0982000:intron | 20.0% |
| !! | AAAGAAAATAAACATTTGCT+TGG | - | chr6_4:21610518-21610537 | None:intergenic | 20.0% |
| !! | AATTGAATTGATGTAGTTTA+TGG | - | chr6_4:21610709-21610728 | None:intergenic | 20.0% |
| !! | ATCAAAAATATATCCAAATC+AGG | - | chr6_4:21610752-21610771 | None:intergenic | 20.0% |
| !!! | TGATTTGGATATATTTTTGA+TGG | + | chr6_4:21610751-21610770 | Msa0982000:intron | 20.0% |
| !! | TCCTATATATGTTTCATTAA+TGG | + | chr6_4:21611104-21611123 | Msa0982000:intron | 20.0% |
| !! | ACCATTAATGAAACATATAT+AGG | - | chr6_4:21611108-21611127 | None:intergenic | 20.0% |
| !!! | GGATATATTTTATATCATGA+AGG | + | chr6_4:21611360-21611379 | Msa0982000:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTGCTGCT+GGG | + | chr6_4:21611439-21611458 | Msa0982000:intron | 20.0% |
| !!! | TTATTCTGATATTTTTACCT+AGG | + | chr6_4:21611515-21611534 | Msa0982000:intron | 20.0% |
| !! | TGAAAAAATTATACACATTC+AGG | - | chr6_4:21611591-21611610 | None:intergenic | 20.0% |
| !!! | TGAATGTGTATAATTTTTTC+AGG | + | chr6_4:21611590-21611609 | Msa0982000:intron | 20.0% |
| !! | GTATTAAAATGCTCAAATAA+TGG | - | chr6_4:21611681-21611700 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTGGGAATAAAT+AGG | - | chr6_4:21612010-21612029 | None:intergenic | 20.0% |
| !! | TTTAAACACAATATTAGACA+CGG | - | chr6_4:21612549-21612568 | None:intergenic | 20.0% |
| !! | AGCTCTATTACTAATTTAAA+TGG | + | chr6_4:21612619-21612638 | Msa0982000:intron | 20.0% |
| !! | TTAGTCAATTTGAAAAAGAA+TGG | - | chr6_4:21613120-21613139 | None:intergenic | 20.0% |
| !!! | TCTTTTTCAAATTGACTAAT+AGG | + | chr6_4:21613121-21613140 | Msa0982000:three_prime_UTR | 20.0% |
| !! | AATTTATAATGCACAATTGA+AGG | + | chr6_4:21613248-21613267 | Msa0982000:three_prime_UTR | 20.0% |
| !! | TGTTGATAAGCTTATGAAAA+CGG | - | chr6_4:21609463-21609482 | None:intergenic | 25.0% |
| ! | TAAAATAAGCCAATCCAAAT+AGG | + | chr6_4:21609567-21609586 | Msa0982000:intron | 25.0% |
| ! | TTCTACATGTTCCAAAAATA+TGG | + | chr6_4:21609683-21609702 | Msa0982000:intron | 25.0% |
| !!! | ATTTTATCATGTTTTGGTCT+TGG | + | chr6_4:21609706-21609725 | Msa0982000:intron | 25.0% |
| !!! | TTTTATCATGTTTTGGTCTT+GGG | + | chr6_4:21609707-21609726 | Msa0982000:intron | 25.0% |
| !!! | GTAAGTTTTATAAGCTATCT+TGG | + | chr6_4:21610140-21610159 | Msa0982000:intron | 25.0% |
| !! | TTGATGTAGTTTGTCAATAA+TGG | - | chr6_4:21610254-21610273 | None:intergenic | 25.0% |
| ! | TAAATTCTGTGGTTTCAAAT+GGG | + | chr6_4:21610374-21610393 | Msa0982000:intron | 25.0% |
| !! | TTTATCTTGGTGTAAAGAAT+TGG | + | chr6_4:21610442-21610461 | Msa0982000:intron | 25.0% |
| ! | TAGTTAGTAGTGAATTAAAG+AGG | + | chr6_4:21610565-21610584 | Msa0982000:intron | 25.0% |
| !! | TGTGGCTAAATATTTGTTAA+AGG | - | chr6_4:21610634-21610653 | None:intergenic | 25.0% |
| ! | ACTACATCAATTCAATTTCT+TGG | + | chr6_4:21610712-21610731 | Msa0982000:intron | 25.0% |
| ! | AATGTTTAATCTACCTGATT+TGG | + | chr6_4:21610736-21610755 | Msa0982000:intron | 25.0% |
| !! | TTTTCCACAAATAACATACT+TGG | - | chr6_4:21611034-21611053 | None:intergenic | 25.0% |
| ! | TTATTTGTGGAAAATGTTGT+TGG | + | chr6_4:21611040-21611059 | Msa0982000:CDS | 25.0% |
| ! | CAGAGTAAAATAACATTCTA+AGG | - | chr6_4:21611311-21611330 | None:intergenic | 25.0% |
| ! | TATATCATGAAGGAATCAAT+TGG | + | chr6_4:21611370-21611389 | Msa0982000:intron | 25.0% |
| ! | GCAGCAAAAAAAAAAAAAAC+AGG | - | chr6_4:21611438-21611457 | None:intergenic | 25.0% |
| !!! | GTTTTTTTTTTTTTTGCTGC+TGG | + | chr6_4:21611438-21611457 | Msa0982000:intron | 25.0% |
| !! | TTTACATTTTACTGATAGTC+AGG | + | chr6_4:21611476-21611495 | Msa0982000:intron | 25.0% |
| !! | TTACATTTTACTGATAGTCA+GGG | + | chr6_4:21611477-21611496 | Msa0982000:intron | 25.0% |
| ! | AATACGATAAATTTCTCGAT+AGG | - | chr6_4:21611765-21611784 | None:intergenic | 25.0% |
| ! | TATGCTCAAAACCAATTAAT+GGG | - | chr6_4:21611959-21611978 | None:intergenic | 25.0% |
| ! | ATATGCTCAAAACCAATTAA+TGG | - | chr6_4:21611960-21611979 | None:intergenic | 25.0% |
| !!! | TTCTCATAATTTTGGAAGTA+TGG | + | chr6_4:21612378-21612397 | Msa0982000:intron | 25.0% |
| AAGCACTTGTGATATTGTTT+GGG | - | chr6_4:21609512-21609531 | None:intergenic | 30.0% | |
| TAAGCACTTGTGATATTGTT+TGG | - | chr6_4:21609513-21609532 | None:intergenic | 30.0% | |
| AAATATCCATATGGCCTATT+TGG | - | chr6_4:21609584-21609603 | None:intergenic | 30.0% | |
| ! | ATAGGCCATATGGATATTTT+TGG | + | chr6_4:21609585-21609604 | Msa0982000:intron | 30.0% |
| ATGAGCCAAAAATATCCATA+TGG | - | chr6_4:21609593-21609612 | None:intergenic | 30.0% | |
| AGAATGATGAATTAACGCTT+AGG | + | chr6_4:21609836-21609855 | Msa0982000:intron | 30.0% | |
| !! | CATAACAAGGTATTGAAAGA+GGG | - | chr6_4:21609948-21609967 | None:intergenic | 30.0% |
| !! | ACATAACAAGGTATTGAAAG+AGG | - | chr6_4:21609949-21609968 | None:intergenic | 30.0% |
| ! | TAAGTCTTTGTTTGAGAGTT+TGG | - | chr6_4:21610067-21610086 | None:intergenic | 30.0% |
| AAACTCTCAAACAAAGACTT+AGG | + | chr6_4:21610066-21610085 | Msa0982000:intron | 30.0% | |
| !! | AAACCATTTTTGTTGGTCAT+TGG | + | chr6_4:21610215-21610234 | Msa0982000:intron | 30.0% |
| ! | AATATTTGCTAATGTTTCCC+TGG | + | chr6_4:21610281-21610300 | Msa0982000:intron | 30.0% |
| !! | CATGTTTGTTGTAAATTCTG+TGG | + | chr6_4:21610363-21610382 | Msa0982000:intron | 30.0% |
| GTAAATTCTGTGGTTTCAAA+TGG | + | chr6_4:21610373-21610392 | Msa0982000:intron | 30.0% | |
| AAATTCTGTGGTTTCAAATG+GGG | + | chr6_4:21610375-21610394 | Msa0982000:intron | 30.0% | |
| ! | GAAGTAATGGAAACCTTAAT+TGG | + | chr6_4:21610486-21610505 | Msa0982000:intron | 30.0% |
| TCACTACTAACTAATGCAAT+GGG | - | chr6_4:21610558-21610577 | None:intergenic | 30.0% | |
| TTCACTACTAACTAATGCAA+TGG | - | chr6_4:21610559-21610578 | None:intergenic | 30.0% | |
| GTAATCTGACATAAAATTCC+TGG | - | chr6_4:21610683-21610702 | None:intergenic | 30.0% | |
| !! | ATATTTTTGATGGCTGACTT+AGG | + | chr6_4:21610761-21610780 | Msa0982000:intron | 30.0% |
| !! | TATTTTTGATGGCTGACTTA+GGG | + | chr6_4:21610762-21610781 | Msa0982000:intron | 30.0% |
| GTTACTGATCTAGACAAATA+TGG | + | chr6_4:21610804-21610823 | Msa0982000:CDS | 30.0% | |
| GTTACTCATAATCTTGTGTT+AGG | + | chr6_4:21610929-21610948 | Msa0982000:intron | 30.0% | |
| TGCAAAACTGATTGAAATAC+TGG | + | chr6_4:21611184-21611203 | Msa0982000:CDS | 30.0% | |
| AATTAGTGCTTCAAATGACT+TGG | + | chr6_4:21611338-21611357 | Msa0982000:intron | 30.0% | |
| ATTAGTGCTTCAAATGACTT+GGG | + | chr6_4:21611339-21611358 | Msa0982000:intron | 30.0% | |
| AATCAACTAGAAAGAATCCT+AGG | - | chr6_4:21611535-21611554 | None:intergenic | 30.0% | |
| !! | AGTTGATTCTGTAAACCTTT+TGG | + | chr6_4:21611547-21611566 | Msa0982000:intron | 30.0% |
| AAATGCTCAAATAATGGTCT+TGG | - | chr6_4:21611675-21611694 | None:intergenic | 30.0% | |
| ATGCTCAAAACCAATTAATG+GGG | - | chr6_4:21611958-21611977 | None:intergenic | 30.0% | |
| ! | CACGTATCTGTAATAACTTT+TGG | - | chr6_4:21612124-21612143 | None:intergenic | 30.0% |
| AAGTTATTACAGATACGTGA+AGG | + | chr6_4:21612125-21612144 | Msa0982000:CDS | 30.0% | |
| AGTTATTACAGATACGTGAA+GGG | + | chr6_4:21612126-21612145 | Msa0982000:CDS | 30.0% | |
| TCAAACCATATGGTTAAGAA+AGG | - | chr6_4:21612201-21612220 | None:intergenic | 30.0% | |
| AATCCTTGATATCATATGCT+TGG | + | chr6_4:21612270-21612289 | Msa0982000:intron | 30.0% | |
| ! | GTGGATTTTCTTTATTCTCA+AGG | + | chr6_4:21612502-21612521 | Msa0982000:intron | 30.0% |
| ! | AACACATTAGTCTCAAACAA+CGG | + | chr6_4:21612706-21612725 | Msa0982000:CDS | 30.0% |
| AATGCATACCTGTATAAGAA+CGG | - | chr6_4:21612860-21612879 | None:intergenic | 30.0% | |
| GTGAAAAGATACTGAAGTAA+GGG | - | chr6_4:21612917-21612936 | None:intergenic | 30.0% | |
| !! | TATCTTTCTCTATTTCTGGT+TGG | - | chr6_4:21613310-21613329 | None:intergenic | 30.0% |
| CCAATATCTTTCTCTATTTC+TGG | - | chr6_4:21613314-21613333 | None:intergenic | 30.0% | |
| CCAGAAATAGAGAAAGATAT+TGG | + | chr6_4:21613311-21613330 | Msa0982000:three_prime_UTR | 30.0% | |
| ! | TTTTCAGACAAAACCCACTA+GGG | - | chr6_4:21609139-21609158 | None:intergenic | 35.0% |
| ! | ATTTTCAGACAAAACCCACT+AGG | - | chr6_4:21609140-21609159 | None:intergenic | 35.0% |
| !!! | TAGTGGGTTTTGTCTGAAAA+TGG | + | chr6_4:21609139-21609158 | Msa0982000:exon | 35.0% |
| !! | AAGGTATTGAAAGAGGGTTT+GGG | - | chr6_4:21609942-21609961 | None:intergenic | 35.0% |
| ! | TCTTTGTTTGAGAGTTTGGA+GGG | - | chr6_4:21610063-21610082 | None:intergenic | 35.0% |
| ! | ACATGCTCTCTAAAAATGAC+TGG | - | chr6_4:21610348-21610367 | None:intergenic | 35.0% |
| TTGGCATCATTAATCCTGAA+AGG | + | chr6_4:21610461-21610480 | Msa0982000:intron | 35.0% | |
| ATCCTGAAAGGTTGAAGTAA+TGG | + | chr6_4:21610473-21610492 | Msa0982000:intron | 35.0% | |
| TTCCATTACTTCAACCTTTC+AGG | - | chr6_4:21610478-21610497 | None:intergenic | 35.0% | |
| !!! | GAGGAATTTTATTTTCAGCC+AGG | + | chr6_4:21610584-21610603 | Msa0982000:intron | 35.0% |
| TTGTTAAAGGAAAAATGGGC+AGG | - | chr6_4:21610621-21610640 | None:intergenic | 35.0% | |
| !! | ATTTTTGATGGCTGACTTAG+GGG | + | chr6_4:21610763-21610782 | Msa0982000:intron | 35.0% |
| TTGGAGGCTTCAATAAGAAT+GGG | - | chr6_4:21611015-21611034 | None:intergenic | 35.0% | |
| TCCACAAATAACATACTTGG+AGG | - | chr6_4:21611031-21611050 | None:intergenic | 35.0% | |
| GGAAAATGTTGTTGGATTTG+AGG | + | chr6_4:21611048-21611067 | Msa0982000:CDS | 35.0% | |
| ATGGGATTCCAAACTGTAAA+GGG | - | chr6_4:21611247-21611266 | None:intergenic | 35.0% | |
| TATGGGATTCCAAACTGTAA+AGG | - | chr6_4:21611248-21611267 | None:intergenic | 35.0% | |
| ! | AGTTTGGAATCCCATATTCT+AGG | + | chr6_4:21611252-21611271 | Msa0982000:CDS | 35.0% |
| AATAACGAGGCCTAGAATAT+GGG | - | chr6_4:21611265-21611284 | None:intergenic | 35.0% | |
| AAATAACGAGGCCTAGAATA+TGG | - | chr6_4:21611266-21611285 | None:intergenic | 35.0% | |
| CAATCATCTAGGAAAGATGA+CGG | - | chr6_4:21611627-21611646 | None:intergenic | 35.0% | |
| TTGGAGATTGAATTAGCTGA+CGG | - | chr6_4:21611656-21611675 | None:intergenic | 35.0% | |
| !! | GCATTTTAATACAGCTTCAC+AGG | + | chr6_4:21611689-21611708 | Msa0982000:CDS | 35.0% |
| GGAAGATTATTTGTCAGTAG+AGG | + | chr6_4:21611710-21611729 | Msa0982000:CDS | 35.0% | |
| CGATACAAATGTTGAATCTG+CGG | + | chr6_4:21611800-21611819 | Msa0982000:CDS | 35.0% | |
| CAAAACCAATTAATGGGGAA+AGG | - | chr6_4:21611953-21611972 | None:intergenic | 35.0% | |
| ACAACATCTAAGCTCGTTTA+AGG | - | chr6_4:21612069-21612088 | None:intergenic | 35.0% | |
| AGAAGCCTTTCTTAACCATA+TGG | + | chr6_4:21612193-21612212 | Msa0982000:intron | 35.0% | |
| TGCGAATACATCAAACCATA+TGG | - | chr6_4:21612211-21612230 | None:intergenic | 35.0% | |
| CTACCAAGCATATGATATCA+AGG | - | chr6_4:21612276-21612295 | None:intergenic | 35.0% | |
| ! | CGTAGCGATTCTCATAATTT+TGG | + | chr6_4:21612370-21612389 | Msa0982000:intron | 35.0% |
| ACACATGCATTCATGTGAAA+GGG | - | chr6_4:21612572-21612591 | None:intergenic | 35.0% | |
| GTATTTGTCATCCTGTAACT+AGG | + | chr6_4:21612641-21612660 | Msa0982000:intron | 35.0% | |
| TAAGTTTGCAACCTAGTTAC+AGG | - | chr6_4:21612655-21612674 | None:intergenic | 35.0% | |
| ! | TGTTTGAGACTAATGTGTTC+TGG | - | chr6_4:21612705-21612724 | None:intergenic | 35.0% |
| ! | ATTAGTCTCAAACAACGGTA+TGG | + | chr6_4:21612711-21612730 | Msa0982000:intron | 35.0% |
| CTAACTAATCATGCAAAGCA+GGG | - | chr6_4:21612769-21612788 | None:intergenic | 35.0% | |
| ACTAACTAATCATGCAAAGC+AGG | - | chr6_4:21612770-21612789 | None:intergenic | 35.0% | |
| ATAACTCAGCAGTCAACAAA+TGG | - | chr6_4:21612794-21612813 | None:intergenic | 35.0% | |
| AATAGTCTCCGTTCTTATAC+AGG | + | chr6_4:21612849-21612868 | Msa0982000:intron | 35.0% | |
| TTATACAGGTATGCATTGCT+AGG | + | chr6_4:21612863-21612882 | Msa0982000:intron | 35.0% | |
| GGTGAAAAGATACTGAAGTA+AGG | - | chr6_4:21612918-21612937 | None:intergenic | 35.0% | |
| ATCGAAAAATCACCAAGCTT+CGG | - | chr6_4:21612939-21612958 | None:intergenic | 35.0% | |
| !! | GTTGCTGTTTCAATCAACTA+TGG | + | chr6_4:21613044-21613063 | Msa0982000:three_prime_UTR | 35.0% |
| AAACATTCTAACTCGTGCAA+GGG | - | chr6_4:21613078-21613097 | None:intergenic | 35.0% | |
| AAAACATTCTAACTCGTGCA+AGG | - | chr6_4:21613079-21613098 | None:intergenic | 35.0% | |
| TGCACAATTGAAGGTAAAAG+AGG | + | chr6_4:21613257-21613276 | Msa0982000:three_prime_UTR | 35.0% | |
| ! | GATGAAAGCACAAGTAAACG+CGG | + | chr6_4:21609312-21609331 | Msa0982000:CDS | 40.0% |
| ! | CTTTTCTCATCGTCCTTATC+AGG | + | chr6_4:21609390-21609409 | Msa0982000:CDS | 40.0% |
| AAGCATGCACATACCTGATA+AGG | - | chr6_4:21609406-21609425 | None:intergenic | 40.0% | |
| TCCATATGGCCTATTTGGAT+TGG | - | chr6_4:21609579-21609598 | None:intergenic | 40.0% | |
| !!! | TTTTGGTCTTGGGCTTTGTT+TGG | + | chr6_4:21609717-21609736 | Msa0982000:intron | 40.0% |
| !! | TTTGGTCTTGGGCTTTGTTT+GGG | + | chr6_4:21609718-21609737 | Msa0982000:intron | 40.0% |
| !! | TTTTGGGGGTGGGAAATATA+GGG | + | chr6_4:21609767-21609786 | Msa0982000:intron | 40.0% |
| !! | AGGTATTGAAAGAGGGTTTG+GGG | - | chr6_4:21609941-21609960 | None:intergenic | 40.0% |
| !! | CAAGGTATTGAAAGAGGGTT+TGG | - | chr6_4:21609943-21609962 | None:intergenic | 40.0% |
| GAAAAAAAGGAAGGAGCAAG+CGG | - | chr6_4:21610016-21610035 | None:intergenic | 40.0% | |
| GAGGGTTTGGAAAAAAAGGA+AGG | - | chr6_4:21610025-21610044 | None:intergenic | 40.0% | |
| TTTGAGAGTTTGGAGGGAAA+GGG | - | chr6_4:21610057-21610076 | None:intergenic | 40.0% | |
| ! | GTCTTTGTTTGAGAGTTTGG+AGG | - | chr6_4:21610064-21610083 | None:intergenic | 40.0% |
| AAAGACTTAGGCCCTGTTAA+GGG | + | chr6_4:21610078-21610097 | Msa0982000:intron | 40.0% | |
| TAAGCAGTATGCCCTTAACA+GGG | - | chr6_4:21610092-21610111 | None:intergenic | 40.0% | |
| ATAAGCAGTATGCCCTTAAC+AGG | - | chr6_4:21610093-21610112 | None:intergenic | 40.0% | |
| CGACCAATGACCAACAAAAA+TGG | - | chr6_4:21610221-21610240 | None:intergenic | 40.0% | |
| TTTGTTGGTCATTGGTCGTT+TGG | + | chr6_4:21610223-21610242 | Msa0982000:intron | 40.0% | |
| ATTTGTAGGGTGGACAATTG+TGG | - | chr6_4:21610652-21610671 | None:intergenic | 40.0% | |
| CCTGGCTGACAATATTTGTA+GGG | - | chr6_4:21610665-21610684 | None:intergenic | 40.0% | |
| TCCTGGCTGACAATATTTGT+AGG | - | chr6_4:21610666-21610685 | None:intergenic | 40.0% | |
| CTTGGAGGCTTCAATAAGAA+TGG | - | chr6_4:21611016-21611035 | None:intergenic | 40.0% | |
| ! | GCCTCCAAGTATGTTATTTG+TGG | + | chr6_4:21611027-21611046 | Msa0982000:CDS | 40.0% |
| TAACTCTTCTGTGTCCTTTC+TGG | + | chr6_4:21611141-21611160 | Msa0982000:intron | 40.0% | |
| ATTCTGAGCCCTTTACAGTT+TGG | + | chr6_4:21611236-21611255 | Msa0982000:CDS | 40.0% | |
| !!! | TAGGCCTCGTTATTTTTGTC+TGG | + | chr6_4:21611271-21611290 | Msa0982000:CDS | 40.0% |
| CTCACCAGACAAAAATAACG+AGG | - | chr6_4:21611278-21611297 | None:intergenic | 40.0% | |
| ! | TGAAGGAATCAATTGGTGTC+AGG | + | chr6_4:21611377-21611396 | Msa0982000:intron | 40.0% |
| ! | TTTTTGCTGCTGGGTCTTAA+AGG | + | chr6_4:21611448-21611467 | Msa0982000:intron | 40.0% |
| ATATCACACACTCAGCCAAA+AGG | - | chr6_4:21611565-21611584 | None:intergenic | 40.0% | |
| GACGGTTGAAACAATCATCT+AGG | - | chr6_4:21611638-21611657 | None:intergenic | 40.0% | |
| TCAACATTTGTATCGCTGCT+AGG | - | chr6_4:21611795-21611814 | None:intergenic | 40.0% | |
| !! | AGAAGTGTCATTAGACAGAC+TGG | - | chr6_4:21611835-21611854 | None:intergenic | 40.0% |
| AGAACTTCAGAGACAGATGA+TGG | + | chr6_4:21611855-21611874 | Msa0982000:CDS | 40.0% | |
| GGTATCCTTTCCCCATTAAT+TGG | + | chr6_4:21611945-21611964 | Msa0982000:intron | 40.0% | |
| AACCTGAACAGTAGCCAAAA+GGG | - | chr6_4:21612160-21612179 | None:intergenic | 40.0% | |
| TAACCTGAACAGTAGCCAAA+AGG | - | chr6_4:21612161-21612180 | None:intergenic | 40.0% | |
| !! | TTTTGGCTACTGTTCAGGTT+AGG | + | chr6_4:21612160-21612179 | Msa0982000:intron | 40.0% |
| TAGATACTTTACACCGAGAG+AGG | + | chr6_4:21612476-21612495 | Msa0982000:CDS | 40.0% | |
| GACACATGCATTCATGTGAA+AGG | - | chr6_4:21612573-21612592 | None:intergenic | 40.0% | |
| TCTGGAAACTCGAAATCTTC+AGG | - | chr6_4:21612687-21612706 | None:intergenic | 40.0% | |
| ! | TGTTGACTGCTGAGTTATGT+TGG | + | chr6_4:21612796-21612815 | Msa0982000:intron | 40.0% |
| ! | AGTATCTTTTCACCGAAGCT+TGG | + | chr6_4:21612924-21612943 | Msa0982000:CDS | 40.0% |
| TATCGTTGCATGATACTCAC+AGG | - | chr6_4:21612997-21613016 | None:intergenic | 40.0% | |
| ATCATGTAACACAATGCCGT+GGG | + | chr6_4:21613022-21613041 | Msa0982000:three_prime_UTR | 40.0% | |
| TTGATTGAAACAGCAACCCA+CGG | - | chr6_4:21613041-21613060 | None:intergenic | 40.0% | |
| GAACACAACACAACCCTAGT+GGG | + | chr6_4:21609123-21609142 | Msa0982000:five_prime_UTR | 45.0% | |
| AGAGTTCTCGAGTTCTACAG+CGG | + | chr6_4:21609176-21609195 | Msa0982000:CDS | 45.0% | |
| GCCAATCCAAATAGGCCATA+TGG | + | chr6_4:21609575-21609594 | Msa0982000:intron | 45.0% | |
| !! | TTGGGCTTTGTTTGGGAGTT+TGG | + | chr6_4:21609725-21609744 | Msa0982000:intron | 45.0% |
| !!! | GTTTTGGGGGTGGGAAATAT+AGG | + | chr6_4:21609766-21609785 | Msa0982000:intron | 45.0% |
| TTTGGGGGTGGGAAATATAG+GGG | + | chr6_4:21609768-21609787 | Msa0982000:intron | 45.0% | |
| GTGGGAAATATAGGGGGAAA+TGG | + | chr6_4:21609775-21609794 | Msa0982000:intron | 45.0% | |
| TATTGAAAGAGGGTTTGGGG+GGG | - | chr6_4:21609938-21609957 | None:intergenic | 45.0% | |
| GTATTGAAAGAGGGTTTGGG+GGG | - | chr6_4:21609939-21609958 | None:intergenic | 45.0% | |
| ! | GGTATTGAAAGAGGGTTTGG+GGG | - | chr6_4:21609940-21609959 | None:intergenic | 45.0% |
| AGGGGAGGGTTTGGAAAAAA+AGG | - | chr6_4:21610029-21610048 | None:intergenic | 45.0% | |
| GTTTGAGAGTTTGGAGGGAA+AGG | - | chr6_4:21610058-21610077 | None:intergenic | 45.0% | |
| CAAAGACTTAGGCCCTGTTA+AGG | + | chr6_4:21610077-21610096 | Msa0982000:intron | 45.0% | |
| TTGAGCTCACAGCTTGTATC+AGG | - | chr6_4:21610174-21610193 | None:intergenic | 45.0% | |
| GTTTCCCTGGTCATAACAGA+AGG | + | chr6_4:21610294-21610313 | Msa0982000:intron | 45.0% | |
| TGCTTGGACTCAGCCAATTA+AGG | - | chr6_4:21610502-21610521 | None:intergenic | 45.0% | |
| GGCTGACAATATTTGTAGGG+TGG | - | chr6_4:21610662-21610681 | None:intergenic | 45.0% | |
| CCCTACAAATATTGTCAGCC+AGG | + | chr6_4:21610662-21610681 | Msa0982000:intron | 45.0% | |
| !! | ACAAATATGGTGCCGATGCA+TGG | + | chr6_4:21610817-21610836 | Msa0982000:CDS | 45.0% |
| AATTCACCTTGTCGCGTGTA+AGG | - | chr6_4:21610864-21610883 | None:intergenic | 45.0% | |
| TCTTGTGTTAGGTCTCCAGA+AGG | + | chr6_4:21610940-21610959 | Msa0982000:intron | 45.0% | |
| TCAGATGTCTGTAGCCAGAA+AGG | - | chr6_4:21611158-21611177 | None:intergenic | 45.0% | |
| ACTGATAGTCAGGGCAAAAG+CGG | + | chr6_4:21611486-21611505 | Msa0982000:intron | 45.0% | |
| !! | TTCACCCAAGCTTGTTAGAG+AGG | + | chr6_4:21611907-21611926 | Msa0982000:CDS | 45.0% |
| TACAGATACGTGAAGGGAAC+TGG | + | chr6_4:21612132-21612151 | Msa0982000:CDS | 45.0% | |
| ! | GATGTTTTGTCCCTCTTCAC+TGG | - | chr6_4:21612438-21612457 | None:intergenic | 45.0% |
| GAGGGACAAAACATCACTCA+AGG | + | chr6_4:21612443-21612462 | Msa0982000:CDS | 45.0% | |
| GAAAATCCACTCACCTCTCT+CGG | - | chr6_4:21612492-21612511 | None:intergenic | 45.0% | |
| ! | ACAACGGTATGGCATTTTGC+TGG | + | chr6_4:21612722-21612741 | Msa0982000:intron | 45.0% |
| GATCATGTAACACAATGCCG+TGG | + | chr6_4:21613021-21613040 | Msa0982000:three_prime_UTR | 45.0% | |
| CGAACACAACACAACCCTAG+TGG | + | chr6_4:21609122-21609141 | Msa0982000:five_prime_UTR | 50.0% | |
| CTCGAGTTCTACAGCGGTAT+CGG | + | chr6_4:21609182-21609201 | Msa0982000:CDS | 50.0% | |
| GTGACATGAGCAGTAAGCAG+TGG | - | chr6_4:21609538-21609557 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr6_4:21609728-21609747 | Msa0982000:intron | 50.0% |
| TGTTTGGGAGTTTGGAGGAG+AGG | + | chr6_4:21609733-21609752 | Msa0982000:intron | 50.0% | |
| ! | AGAGGAGAGGGGATGGTTTT+GGG | + | chr6_4:21609751-21609770 | Msa0982000:intron | 50.0% |
| TTGGGGGTGGGAAATATAGG+GGG | + | chr6_4:21609769-21609788 | Msa0982000:intron | 50.0% | |
| GAGTTTGGAGGGAAAGGGAA+GGG | - | chr6_4:21610052-21610071 | None:intergenic | 50.0% | |
| AGAGTTTGGAGGGAAAGGGA+AGG | - | chr6_4:21610053-21610072 | None:intergenic | 50.0% | |
| TCCCTGGTCATAACAGAAGG+TGG | + | chr6_4:21610297-21610316 | Msa0982000:intron | 50.0% | |
| CCCACCTTCTGTTATGACCA+GGG | - | chr6_4:21610301-21610320 | None:intergenic | 50.0% | |
| CCCTGGTCATAACAGAAGGT+GGG | + | chr6_4:21610298-21610317 | Msa0982000:intron | 50.0% | |
| ACCCACCTTCTGTTATGACC+AGG | - | chr6_4:21610302-21610321 | None:intergenic | 50.0% | |
| TTAGGTCTCCAGAAGGACAC+TGG | + | chr6_4:21610947-21610966 | Msa0982000:intron | 50.0% | |
| ! | AGAAGGACACTGGTGATGCA+CGG | + | chr6_4:21610957-21610976 | Msa0982000:CDS | 50.0% |
| !! | ACCCAAGCTTGTTAGAGAGG+TGG | + | chr6_4:21611910-21611929 | Msa0982000:CDS | 50.0% |
| CCCACCTCTCTAACAAGCTT+GGG | - | chr6_4:21611914-21611933 | None:intergenic | 50.0% | |
| !! | CCCAAGCTTGTTAGAGAGGT+GGG | + | chr6_4:21611911-21611930 | Msa0982000:CDS | 50.0% |
| !! | CCAAGCTTGTTAGAGAGGTG+GGG | + | chr6_4:21611912-21611931 | Msa0982000:CDS | 50.0% |
| !! | CAAGCTTGTTAGAGAGGTGG+GGG | + | chr6_4:21611913-21611932 | Msa0982000:CDS | 50.0% |
| !! | CTCCCTTTTGGCTACTGTTC+AGG | + | chr6_4:21612155-21612174 | Msa0982000:CDS | 50.0% |
| ! | TCTTCACTGGCTGCACATTG+AGG | - | chr6_4:21612425-21612444 | None:intergenic | 50.0% |
| TCAATGTGCAGCCAGTGAAG+AGG | + | chr6_4:21612424-21612443 | Msa0982000:intron | 50.0% | |
| CAATGTGCAGCCAGTGAAGA+GGG | + | chr6_4:21612425-21612444 | Msa0982000:intron | 50.0% | |
| TTTACACCGAGAGAGGTGAG+TGG | + | chr6_4:21612483-21612502 | Msa0982000:intron | 50.0% | |
| ! | GAGTTCTACAGCGGTATCGG+TGG | + | chr6_4:21609185-21609204 | Msa0982000:CDS | 55.0% |
| GGAGTTTGGAGGAGAGGAGA+GGG | + | chr6_4:21609739-21609758 | Msa0982000:intron | 55.0% | |
| GAGTTTGGAGGAGAGGAGAG+GGG | + | chr6_4:21609740-21609759 | Msa0982000:intron | 55.0% | |
| ! | GAGAGGAGAGGGGATGGTTT+TGG | + | chr6_4:21609750-21609769 | Msa0982000:intron | 55.0% |
| !! | GAGGAGAGGGGATGGTTTTG+GGG | + | chr6_4:21609752-21609771 | Msa0982000:intron | 55.0% |
| !!! | AGGAGAGGGGATGGTTTTGG+GGG | + | chr6_4:21609753-21609772 | Msa0982000:intron | 55.0% |
| ! | AAGAGGGTTTGGGGGGGTTT+TGG | - | chr6_4:21609932-21609951 | None:intergenic | 55.0% |
| TTGGAGGGAAAGGGAAGGGA+GGG | - | chr6_4:21610048-21610067 | None:intergenic | 55.0% | |
| TTTGGAGGGAAAGGGAAGGG+AGG | - | chr6_4:21610049-21610068 | None:intergenic | 55.0% | |
| AGGGGAAAGGAGCCATGCAT+CGG | - | chr6_4:21610832-21610851 | None:intergenic | 55.0% | |
| TGTCGCGTGTAAGGTTGGCA+GGG | - | chr6_4:21610855-21610874 | None:intergenic | 55.0% | |
| TTGTCGCGTGTAAGGTTGGC+AGG | - | chr6_4:21610856-21610875 | None:intergenic | 55.0% | |
| TGCCAACCTTACACGCGACA+AGG | + | chr6_4:21610855-21610874 | Msa0982000:CDS | 55.0% | |
| CACCTTGTCGCGTGTAAGGT+TGG | - | chr6_4:21610860-21610879 | None:intergenic | 55.0% | |
| GTGCATCACCAGTGTCCTTC+TGG | - | chr6_4:21610958-21610977 | None:intergenic | 55.0% | |
| ! | GAAGGACACTGGTGATGCAC+GGG | + | chr6_4:21610958-21610977 | Msa0982000:CDS | 55.0% |
| CCCCACCTCTCTAACAAGCT+TGG | - | chr6_4:21611915-21611934 | None:intergenic | 55.0% | |
| ! | CAGCAGCAGCGCTTTGAATC+AGG | - | chr6_4:21612096-21612115 | None:intergenic | 55.0% |
| !! | GAAGGGAACTGGCTCCCTTT+TGG | + | chr6_4:21612143-21612162 | Msa0982000:CDS | 55.0% |
| !! | CTACAGCGGTATCGGTGGCA+TGG | + | chr6_4:21609190-21609209 | Msa0982000:CDS | 60.0% |
| GGGAGTTTGGAGGAGAGGAG+AGG | + | chr6_4:21609738-21609757 | Msa0982000:intron | 60.0% | |
| TTGGAGGAGAGGAGAGGGGA+TGG | + | chr6_4:21609744-21609763 | Msa0982000:intron | 60.0% | |
| !!! | AGAGGGGATGGTTTTGGGGG+TGG | + | chr6_4:21609756-21609775 | Msa0982000:intron | 60.0% |
| !!! | GAGGGGATGGTTTTGGGGGT+GGG | + | chr6_4:21609757-21609776 | Msa0982000:intron | 60.0% |
| !!! | GGGTTTGGGGGGGTTTTGGA+GGG | - | chr6_4:21609928-21609947 | None:intergenic | 60.0% |
| !! | AGGGTTTGGGGGGGTTTTGG+AGG | - | chr6_4:21609929-21609948 | None:intergenic | 60.0% |
| TGGAGGGAAAGGGAAGGGAG+GGG | - | chr6_4:21610047-21610066 | None:intergenic | 60.0% | |
| GGGCAGGATGTGATGCTTCC+TGG | - | chr6_4:21610605-21610624 | None:intergenic | 60.0% | |
| AAGGTTGGCAGGGAGGGGAA+AGG | - | chr6_4:21610845-21610864 | None:intergenic | 60.0% | |
| CGTGTAAGGTTGGCAGGGAG+GGG | - | chr6_4:21610850-21610869 | None:intergenic | 60.0% | |
| GCGTGTAAGGTTGGCAGGGA+GGG | - | chr6_4:21610851-21610870 | None:intergenic | 60.0% | |
| !! | AGAGAGGTGGGGGAGTGCTA+TGG | + | chr6_4:21611923-21611942 | Msa0982000:CDS | 60.0% |
| !! | GAGAGGTGGGGGAGTGCTAT+GGG | + | chr6_4:21611924-21611943 | Msa0982000:CDS | 60.0% |
| AGGGAAGGGAGGGGAGGGTT+TGG | - | chr6_4:21610038-21610057 | None:intergenic | 65.0% | |
| GGGAAAGGGAAGGGAGGGGA+GGG | - | chr6_4:21610043-21610062 | None:intergenic | 65.0% | |
| AGGGAAAGGGAAGGGAGGGG+AGG | - | chr6_4:21610044-21610063 | None:intergenic | 65.0% | |
| CGCGTGTAAGGTTGGCAGGG+AGG | - | chr6_4:21610852-21610871 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 21609078 | 21613359 | 21609078 | ID=Msa0982000;Name=Msa0982000 |
| chr6_4 | mRNA | 21609078 | 21613359 | 21609078 | ID=Msa0982000-mRNA-1;Parent=Msa0982000;Name=Msa0982000-mRNA-1;_AED=0.10;_eAED=0.10;_QI=80|1|1|1|1|1|10|410|378 |
| chr6_4 | exon | 21609078 | 21609211 | 21609078 | ID=Msa0982000-mRNA-1:exon:6689;Parent=Msa0982000-mRNA-1 |
| chr6_4 | exon | 21609301 | 21609411 | 21609301 | ID=Msa0982000-mRNA-1:exon:6690;Parent=Msa0982000-mRNA-1 |
| chr6_4 | exon | 21610783 | 21610876 | 21610783 | ID=Msa0982000-mRNA-1:exon:6691;Parent=Msa0982000-mRNA-1 |
| chr6_4 | exon | 21610951 | 21611069 | 21610951 | ID=Msa0982000-mRNA-1:exon:6692;Parent=Msa0982000-mRNA-1 |
| chr6_4 | exon | 21611170 | 21611292 | 21611170 | ID=Msa0982000-mRNA-1:exon:6693;Parent=Msa0982000-mRNA-1 |
| chr6_4 | exon | 21611612 | 21611945 | 21611612 | ID=Msa0982000-mRNA-1:exon:6694;Parent=Msa0982000-mRNA-1 |
| chr6_4 | exon | 21612082 | 21612176 | 21612082 | ID=Msa0982000-mRNA-1:exon:6695;Parent=Msa0982000-mRNA-1 |
| chr6_4 | exon | 21612435 | 21612497 | 21612435 | ID=Msa0982000-mRNA-1:exon:6696;Parent=Msa0982000-mRNA-1 |
| chr6_4 | exon | 21612663 | 21612727 | 21612663 | ID=Msa0982000-mRNA-1:exon:6697;Parent=Msa0982000-mRNA-1 |
| chr6_4 | exon | 21612871 | 21613359 | 21612871 | ID=Msa0982000-mRNA-1:exon:6698;Parent=Msa0982000-mRNA-1 |
| chr6_4 | five_prime_UTR | 21609078 | 21609157 | 21609078 | ID=Msa0982000-mRNA-1:five_prime_utr;Parent=Msa0982000-mRNA-1 |
| chr6_4 | CDS | 21609158 | 21609211 | 21609158 | ID=Msa0982000-mRNA-1:cds;Parent=Msa0982000-mRNA-1 |
| chr6_4 | CDS | 21609301 | 21609411 | 21609301 | ID=Msa0982000-mRNA-1:cds;Parent=Msa0982000-mRNA-1 |
| chr6_4 | CDS | 21610783 | 21610876 | 21610783 | ID=Msa0982000-mRNA-1:cds;Parent=Msa0982000-mRNA-1 |
| chr6_4 | CDS | 21610951 | 21611069 | 21610951 | ID=Msa0982000-mRNA-1:cds;Parent=Msa0982000-mRNA-1 |
| chr6_4 | CDS | 21611170 | 21611292 | 21611170 | ID=Msa0982000-mRNA-1:cds;Parent=Msa0982000-mRNA-1 |
| chr6_4 | CDS | 21611612 | 21611945 | 21611612 | ID=Msa0982000-mRNA-1:cds;Parent=Msa0982000-mRNA-1 |
| chr6_4 | CDS | 21612082 | 21612176 | 21612082 | ID=Msa0982000-mRNA-1:cds;Parent=Msa0982000-mRNA-1 |
| chr6_4 | CDS | 21612435 | 21612497 | 21612435 | ID=Msa0982000-mRNA-1:cds;Parent=Msa0982000-mRNA-1 |
| chr6_4 | CDS | 21612663 | 21612727 | 21612663 | ID=Msa0982000-mRNA-1:cds;Parent=Msa0982000-mRNA-1 |
| chr6_4 | CDS | 21612871 | 21612949 | 21612871 | ID=Msa0982000-mRNA-1:cds;Parent=Msa0982000-mRNA-1 |
| chr6_4 | three_prime_UTR | 21612950 | 21613359 | 21612950 | ID=Msa0982000-mRNA-1:three_prime_utr;Parent=Msa0982000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
