Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375240 | XP_013468411.1 | 92.668 | 491 | 13 | 3 | 1 | 486 | 1 | 473 | 0.0 | 881 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375240 | sp|Q8L3X9|KASM_ARATH | 74.058 | 451 | 97 | 2 | 31 | 481 | 29 | 459 | 0.0 | 677 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375240 | A0A072VM15 | 92.668 | 491 | 13 | 3 | 1 | 486 | 1 | 473 | 0.0 | 881 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0074970 | Msa1375240 | 0.809920 | 1.490827e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375240 | MtrunA17_Chr1g0183091 | 92.668 | 491 | 13 | 3 | 1 | 486 | 1 | 473 | 0.0 | 881 |
| Msa1375240 | MtrunA17_Chr4g0070171 | 39.912 | 456 | 220 | 9 | 33 | 481 | 80 | 488 | 8.93e-88 | 277 |
| Msa1375240 | MtrunA17_Chr2g0301361 | 37.500 | 480 | 256 | 8 | 4 | 481 | 48 | 485 | 3.06e-87 | 276 |
| Msa1375240 | MtrunA17_Chr1g0204841 | 37.029 | 451 | 240 | 7 | 33 | 481 | 60 | 468 | 5.56e-87 | 275 |
| Msa1375240 | MtrunA17_Chr8g0388511 | 36.275 | 408 | 217 | 6 | 33 | 438 | 17 | 383 | 3.00e-78 | 249 |
| Msa1375240 | MtrunA17_Chr4g0052121 | 33.407 | 452 | 251 | 11 | 33 | 481 | 58 | 462 | 1.24e-58 | 200 |
| Msa1375240 | MtrunA17_Chr8g0388561 | 40.000 | 190 | 90 | 5 | 292 | 481 | 1 | 166 | 1.07e-32 | 122 |
| Msa1375240 | MtrunA17_Chr8g0388551 | 27.381 | 252 | 112 | 6 | 33 | 284 | 37 | 217 | 4.12e-23 | 99.8 |
| Msa1375240 | MtrunA17_Chr8g0388531 | 28.856 | 201 | 121 | 3 | 33 | 231 | 45 | 225 | 7.22e-22 | 94.0 |
| Msa1375240 | MtrunA17_Chr8g0388541 | 58.929 | 56 | 22 | 1 | 236 | 291 | 1 | 55 | 2.48e-13 | 67.0 |
| Msa1375240 | MtrunA17_Chr8g0388541 | 50.685 | 73 | 33 | 1 | 366 | 438 | 55 | 124 | 1.10e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375240 | AT2G04540.1 | 74.058 | 451 | 97 | 2 | 31 | 481 | 29 | 459 | 0.0 | 677 |
| Msa1375240 | AT5G46290.1 | 37.251 | 451 | 239 | 7 | 33 | 481 | 61 | 469 | 1.73e-87 | 276 |
| Msa1375240 | AT5G46290.3 | 36.188 | 467 | 238 | 8 | 33 | 481 | 61 | 485 | 7.32e-85 | 270 |
| Msa1375240 | AT1G74960.1 | 37.419 | 465 | 243 | 8 | 21 | 481 | 118 | 538 | 6.76e-83 | 266 |
| Msa1375240 | AT1G74960.3 | 37.419 | 465 | 243 | 8 | 21 | 481 | 118 | 538 | 6.76e-83 | 266 |
| Msa1375240 | AT1G74960.2 | 37.419 | 465 | 243 | 8 | 21 | 481 | 118 | 538 | 6.76e-83 | 266 |
| Msa1375240 | AT5G46290.2 | 32.816 | 451 | 204 | 9 | 33 | 481 | 61 | 414 | 1.11e-61 | 207 |
Find 150 sgRNAs with CRISPR-Local
Find 457 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGATATGCTTCGGTAAA+TGG | 0.144969 | tig0019645:-118652 | None:intergenic |
| CGGAACATCGCGAAGGGTTT+TGG | 0.152340 | tig0019645:+118626 | Msa1375240:CDS |
| ACAAGGCCAGATTCTGTATT+TGG | 0.163247 | tig0019645:+123891 | Msa1375240:CDS |
| GTGAATTCAACCACGAAATT+TGG | 0.170597 | tig0019645:+119003 | Msa1375240:CDS |
| ATAAATATTTGGCTAAAATA+TGG | 0.209465 | tig0019645:+124372 | Msa1375240:three_prime_UTR |
| CGAAATTTGGCTTAATTCTA+AGG | 0.209556 | tig0019645:+119016 | Msa1375240:CDS |
| ACGAATCTCTCCATAGATTT+TGG | 0.215851 | tig0019645:-121499 | None:intergenic |
| TCTGAAATGAAATAAATATT+TGG | 0.243689 | tig0019645:+124361 | Msa1375240:three_prime_UTR |
| GCAATGAGAATGATTCAATT+TGG | 0.244331 | tig0019645:+120925 | Msa1375240:CDS |
| GCAGTCACTGCTTGTGCTAC+TGG | 0.246599 | tig0019645:+120883 | Msa1375240:CDS |
| GATCTATTAAAACGTCTTAC+AGG | 0.263339 | tig0019645:-124491 | None:intergenic |
| AAGCTCTTAAAGATTCTAAT+TGG | 0.267158 | tig0019645:+119816 | Msa1375240:CDS |
| ACTTGGAACCAACTAATTAA+TGG | 0.270968 | tig0019645:+118849 | Msa1375240:CDS |
| CAATGAGAATGATTCAATTT+GGG | 0.278917 | tig0019645:+120926 | Msa1375240:CDS |
| TTTGACATAGCTACTCTAAT+TGG | 0.296884 | tig0019645:-123951 | None:intergenic |
| GTAGCTATGTCAAACTCTTT+TGG | 0.297068 | tig0019645:+123960 | Msa1375240:CDS |
| ATTGATGCATTATCAATTGC+AGG | 0.313043 | tig0019645:+120988 | Msa1375240:CDS |
| GGCCACGTTAGCATGAAATA+TGG | 0.325924 | tig0019645:+120244 | Msa1375240:CDS |
| TGGGGTAAGGGCACTGCGTT+TGG | 0.333218 | tig0019645:+118878 | Msa1375240:CDS |
| CTTGTTAAATTAAGAGTTAA+TGG | 0.337796 | tig0019645:-123873 | None:intergenic |
| GGTCATCTCCTTGGTGCTGC+TGG | 0.343211 | tig0019645:+123665 | Msa1375240:CDS |
| GCTAGCATGGTCAGAGAATA+TGG | 0.347485 | tig0019645:-123397 | None:intergenic |
| AACCGAGGAGCCAAAATCTA+TGG | 0.349757 | tig0019645:+121489 | Msa1375240:CDS |
| TGATGGGAGAGGTGCCATTC+TGG | 0.350310 | tig0019645:+121654 | Msa1375240:CDS |
| CCTGCAAATATGTCTCGTTT+TGG | 0.352194 | tig0019645:+124403 | Msa1375240:three_prime_UTR |
| TCATGCTGAGGAGAATTTAA+TGG | 0.353784 | tig0019645:+124090 | Msa1375240:three_prime_UTR |
| GAAGAAACTAAGGGTGTGTT+TGG | 0.353840 | tig0019645:+122803 | Msa1375240:CDS |
| AGAATCTTTAAGAGCTTCAT+TGG | 0.361076 | tig0019645:-119810 | None:intergenic |
| TAAGGAAAAGCTCGTACTTC+AGG | 0.371137 | tig0019645:-124145 | None:intergenic |
| CTCAGGATAGGTGAAGGTTC+TGG | 0.377739 | tig0019645:+121330 | Msa1375240:intron |
| AATTGCATTGTGAGAACATC+TGG | 0.384297 | tig0019645:+124255 | Msa1375240:three_prime_UTR |
| GGGAACAAGCGCAGCAACTT+TGG | 0.389547 | tig0019645:-118964 | None:intergenic |
| TTGTCACCAAATACAGAATC+TGG | 0.389800 | tig0019645:-123897 | None:intergenic |
| AAATCACAATCATTGATATC+AGG | 0.390924 | tig0019645:-124584 | None:intergenic |
| TGTATGGTGCAATTCTAAAT+AGG | 0.394006 | tig0019645:+124284 | Msa1375240:three_prime_UTR |
| GCAGTGACTGCAGCATGATT+TGG | 0.395312 | tig0019645:-120871 | None:intergenic |
| ACCGGTGACAACTACTCTTC+GGG | 0.405117 | tig0019645:-118706 | None:intergenic |
| CATGACTCGTGCTTTAAAAC+AGG | 0.411211 | tig0019645:+121678 | Msa1375240:CDS |
| ACCCTTAGTTTCTTCTGAAT+AGG | 0.413024 | tig0019645:-122795 | None:intergenic |
| GCAATTGGAATAATCATAAG+AGG | 0.415709 | tig0019645:-124238 | None:intergenic |
| GCTACTGGGTCACATTCTAT+TGG | 0.420147 | tig0019645:+120898 | Msa1375240:CDS |
| TAGCATGAAATATGGGTTCC+AGG | 0.420812 | tig0019645:+120252 | Msa1375240:CDS |
| CATGCCATTGACTGCTTCAA+AGG | 0.421259 | tig0019645:+123923 | Msa1375240:CDS |
| TATGGAGAGATTCGTGGCTA+TGG | 0.423675 | tig0019645:+121507 | Msa1375240:CDS |
| CCAAAACGAGACATATTTGC+AGG | 0.424176 | tig0019645:-124403 | None:intergenic |
| ATTTGGGGATGCAGATGTTA+TGG | 0.426257 | tig0019645:+120942 | Msa1375240:CDS |
| AGATGTTCTCACAATGCAAT+TGG | 0.428181 | tig0019645:-124253 | None:intergenic |
| TAGAATTAAGCCAAATTTCG+TGG | 0.428412 | tig0019645:-119013 | None:intergenic |
| CAGTCACTGCTTGTGCTACT+GGG | 0.430249 | tig0019645:+120884 | Msa1375240:CDS |
| TCCTTGTGTTCCTGCTCAGT+GGG | 0.431783 | tig0019645:-119842 | None:intergenic |
| GGGGCTATTGGTCATCTCCT+TGG | 0.431894 | tig0019645:+123656 | Msa1375240:CDS |
| TTCTAAATAGGTCAGGAATC+AGG | 0.432532 | tig0019645:+124296 | Msa1375240:three_prime_UTR |
| AACCGGTGACAACTACTCTT+CGG | 0.433030 | tig0019645:-118707 | None:intergenic |
| AGGTTCTGGAGTCTTGGTCT+TGG | 0.434365 | tig0019645:+121344 | Msa1375240:CDS |
| TACCTATTCAGAAGAAACTA+AGG | 0.438794 | tig0019645:+122793 | Msa1375240:CDS |
| TCTCGGTCATTGATCTAAAT+CGG | 0.441313 | tig0019645:-124522 | None:intergenic |
| AATTGATAATGCATCAATAC+TGG | 0.442107 | tig0019645:-120983 | None:intergenic |
| TTCTGGAGTCTTGGTCTTGG+AGG | 0.446638 | tig0019645:+121347 | Msa1375240:CDS |
| CTGGATCGGACTAGTAAGAT+AGG | 0.457864 | tig0019645:+124021 | Msa1375240:exon |
| AAGCTTTATCTGATATGCTT+CGG | 0.465093 | tig0019645:-118659 | None:intergenic |
| TTGGGCATGGTGACACCTCT+TGG | 0.467880 | tig0019645:+118810 | Msa1375240:CDS |
| TTAATGGAAAATGTGGGGTA+AGG | 0.468366 | tig0019645:+118865 | Msa1375240:CDS |
| GTTGCTGCGCTTGTTCCCAC+TGG | 0.470441 | tig0019645:+118969 | Msa1375240:CDS |
| TAAGGGTGTGTTTGGATGGA+GGG | 0.473153 | tig0019645:+122811 | Msa1375240:CDS |
| CATTAACTCTTAATTTAACA+AGG | 0.477564 | tig0019645:+123874 | Msa1375240:CDS |
| AAACTAAGGGTGTGTTTGGA+TGG | 0.478169 | tig0019645:+122807 | Msa1375240:CDS |
| CACAAACAAACTACACTCAC+TGG | 0.480930 | tig0019645:-118589 | None:intergenic |
| CATGCTACATCTACACCTTT+AGG | 0.481993 | tig0019645:+123216 | Msa1375240:CDS |
| AAGGGCCGCGATGCTTCTTG+TGG | 0.483481 | tig0019645:-121156 | None:intergenic |
| TAATTGGTTTCCCACTGAGC+AGG | 0.484051 | tig0019645:+119832 | Msa1375240:CDS |
| CAACTAATTAATGGAAAATG+TGG | 0.484527 | tig0019645:+118858 | Msa1375240:CDS |
| TAATGGAAAATGTGGGGTAA+GGG | 0.484865 | tig0019645:+118866 | Msa1375240:CDS |
| CTAAGGGTGTGTTTGGATGG+AGG | 0.486911 | tig0019645:+122810 | Msa1375240:CDS |
| ATTCGTGGCTATGGGATGTC+AGG | 0.488176 | tig0019645:+121516 | Msa1375240:CDS |
| GCATCGCGGCCCTTTGATAG+TGG | 0.490347 | tig0019645:+121165 | Msa1375240:CDS |
| GGTAAGGGCACTGCGTTTGG+AGG | 0.494902 | tig0019645:+118881 | Msa1375240:CDS |
| AGGTGAAGGTTCTGGAGTCT+TGG | 0.497176 | tig0019645:+121338 | Msa1375240:CDS |
| TTAACACAGTTAAATGATCT+CGG | 0.502767 | tig0019645:-124539 | None:intergenic |
| AGGGCCGCGATGCTTCTTGT+GGG | 0.506418 | tig0019645:-121155 | None:intergenic |
| CCCTTTGATAGTGGTCGAGA+TGG | 0.506777 | tig0019645:+121174 | Msa1375240:CDS |
| GTTGTGGAGTCCATAAAACT+TGG | 0.511122 | tig0019645:+118832 | Msa1375240:CDS |
| ATTTCGTGGTTGAATTCACC+AGG | 0.512525 | tig0019645:-118999 | None:intergenic |
| ATATTGATAAACATGGCATC+AGG | 0.513692 | tig0019645:+120223 | Msa1375240:CDS |
| GCCACGTTAGCATGAAATAT+GGG | 0.514383 | tig0019645:+120245 | Msa1375240:CDS |
| GGTGCAATTCTAAATAGGTC+AGG | 0.516355 | tig0019645:+124289 | Msa1375240:three_prime_UTR |
| TGCAACCACTCTTACCTTGG+TGG | 0.516765 | tig0019645:-123442 | None:intergenic |
| GATGCAGATGTTATGGTGAC+TGG | 0.517325 | tig0019645:+120949 | Msa1375240:CDS |
| TGCTCAACTGATATGTGAAA+AGG | 0.518775 | tig0019645:+120005 | Msa1375240:CDS |
| ATGGAGAGATTCGTGGCTAT+GGG | 0.522380 | tig0019645:+121508 | Msa1375240:CDS |
| AACTAATTAATGGAAAATGT+GGG | 0.522501 | tig0019645:+118859 | Msa1375240:CDS |
| ATCTCCTTTGAAGCAGTCAA+TGG | 0.522727 | tig0019645:-123927 | None:intergenic |
| TTCCTTGTGTTCCTGCTCAG+TGG | 0.523925 | tig0019645:-119843 | None:intergenic |
| TAGAATTGCACCATACATCA+TGG | 0.531373 | tig0019645:-124278 | None:intergenic |
| TCCCGAAGAGTAGTTGTCAC+CGG | 0.532836 | tig0019645:+118705 | Msa1375240:CDS |
| TCCATCTCGACCACTATCAA+AGG | 0.533832 | tig0019645:-121175 | None:intergenic |
| AGCTCTTGTAGAATAACGCC+TGG | 0.534029 | tig0019645:-124061 | None:intergenic |
| TCTTACCTTGGTGGATGAGA+AGG | 0.535724 | tig0019645:-123433 | None:intergenic |
| ATCTATTAAAACGTCTTACA+GGG | 0.538372 | tig0019645:-124490 | None:intergenic |
| GAACATCTGGCCATGATGTA+TGG | 0.539570 | tig0019645:+124268 | Msa1375240:three_prime_UTR |
| TTCACCAGGGTTAGTTCCAG+TGG | 0.540554 | tig0019645:-118985 | None:intergenic |
| ATCATTGATATCAGGTTAGA+CGG | 0.542428 | tig0019645:-124576 | None:intergenic |
| TGAGTGTAGTTTGTTTGTGA+TGG | 0.548019 | tig0019645:+118593 | Msa1375240:exon |
| GAAGAAACAAGAGGAGGAGG+TGG | 0.549891 | tig0019645:-118684 | None:intergenic |
| AGCACGAGTCATGGCCAGAA+TGG | 0.551728 | tig0019645:-121668 | None:intergenic |
| GTGCATCTCATTCATTCCCC+AGG | 0.556702 | tig0019645:+124043 | Msa1375240:three_prime_UTR |
| ATTACTCAACCTCCTAGTGA+TGG | 0.557704 | tig0019645:+121637 | Msa1375240:CDS |
| GGAAGTCAATTGATCAAATG+TGG | 0.558097 | tig0019645:-118943 | None:intergenic |
| TTGATGTAATCTACATCAGA+AGG | 0.558485 | tig0019645:-123189 | None:intergenic |
| TAATGCATCAATACTGGACT+CGG | 0.561888 | tig0019645:-120977 | None:intergenic |
| CTAAAGAAGACGAGCTAGCA+TGG | 0.562258 | tig0019645:-123410 | None:intergenic |
| CGGGAAGAAACAAGAGGAGG+AGG | 0.573055 | tig0019645:-118687 | None:intergenic |
| CCATCTCGACCACTATCAAA+GGG | 0.575537 | tig0019645:-121174 | None:intergenic |
| GCTCTTGTAGAATAACGCCT+GGG | 0.580824 | tig0019645:-124060 | None:intergenic |
| AAAATCTATGGAGAGATTCG+TGG | 0.583004 | tig0019645:+121501 | Msa1375240:CDS |
| TTACTCAACCTCCTAGTGAT+GGG | 0.586083 | tig0019645:+121638 | Msa1375240:CDS |
| TCCCACTGAGCAGGAACACA+AGG | 0.586433 | tig0019645:+119841 | Msa1375240:CDS |
| ATGGCACCTCTCCCATCACT+AGG | 0.594673 | tig0019645:-121649 | None:intergenic |
| GTTCCCACTGGAACTAACCC+TGG | 0.597954 | tig0019645:+118981 | Msa1375240:CDS |
| ATGGTGACACCTCTTGGTTG+TGG | 0.599365 | tig0019645:+118816 | Msa1375240:CDS |
| ATTGTATGTAGGTTTGGGCA+TGG | 0.609629 | tig0019645:+118797 | Msa1375240:intron |
| CAACCTCCTAGTGATGGGAG+AGG | 0.613052 | tig0019645:+121643 | Msa1375240:CDS |
| AGGAACATCGATCCGTGACA+AGG | 0.617850 | tig0019645:+119762 | Msa1375240:intron |
| ACCACGGATATTGATAAACA+TGG | 0.621168 | tig0019645:+120216 | Msa1375240:CDS |
| GCGTGGCGGAACATCGCGAA+GGG | 0.625508 | tig0019645:+118620 | Msa1375240:CDS |
| GGTCATTGATCTAAATCGGA+TGG | 0.625562 | tig0019645:-124518 | None:intergenic |
| TGCGTGGCGGAACATCGCGA+AGG | 0.630823 | tig0019645:+118619 | Msa1375240:CDS |
| ACTAATTAATGGAAAATGTG+GGG | 0.632550 | tig0019645:+118860 | Msa1375240:CDS |
| AATGAGAATGATTCAATTTG+GGG | 0.633075 | tig0019645:+120927 | Msa1375240:CDS |
| ACCTATTCAGAAGAAACTAA+GGG | 0.633922 | tig0019645:+122794 | Msa1375240:CDS |
| ACCCATATTTCATGCTAACG+TGG | 0.635539 | tig0019645:-120246 | None:intergenic |
| TCACCAGGGTTAGTTCCAGT+GGG | 0.639371 | tig0019645:-118984 | None:intergenic |
| ATATGCTATAAACCTTGTCA+CGG | 0.641292 | tig0019645:-119774 | None:intergenic |
| TTTAGCCTTCTCATCCACCA+AGG | 0.647399 | tig0019645:+123428 | Msa1375240:CDS |
| CAATTGGAATAATCATAAGA+GGG | 0.647677 | tig0019645:-124237 | None:intergenic |
| TTGTTTGTGATGGCAATGCG+TGG | 0.649163 | tig0019645:+118603 | Msa1375240:exon |
| GCACCTCTCCCATCACTAGG+AGG | 0.650311 | tig0019645:-121646 | None:intergenic |
| GCCATGTTTATCAATATCCG+TGG | 0.652979 | tig0019645:-120217 | None:intergenic |
| GCAGGAACACAAGGAAAGAA+CGG | 0.661590 | tig0019645:+119850 | Msa1375240:CDS |
| CAACAGCTCCAGCAGCACCA+AGG | 0.665891 | tig0019645:-123673 | None:intergenic |
| ACTCTTCGGGAAGAAACAAG+AGG | 0.666135 | tig0019645:-118693 | None:intergenic |
| CAAAACGAGACATATTTGCA+GGG | 0.670787 | tig0019645:-124402 | None:intergenic |
| AAATAGGTCAGGAATCAGGA+TGG | 0.680271 | tig0019645:+124300 | Msa1375240:three_prime_UTR |
| CTCTTGTAGAATAACGCCTG+GGG | 0.685659 | tig0019645:-124059 | None:intergenic |
| TTTCGTGGTTGAATTCACCA+GGG | 0.690900 | tig0019645:-118998 | None:intergenic |
| TTTGTGATGGCAATGCGTGG+CGG | 0.692252 | tig0019645:+118606 | Msa1375240:exon |
| TTATGGACTCCACAACCAAG+AGG | 0.692764 | tig0019645:-118825 | None:intergenic |
| AGAGCTAACACATCATGCTG+AGG | 0.698287 | tig0019645:+124078 | Msa1375240:three_prime_UTR |
| CAAGCCCACAAGAAGCATCG+CGG | 0.701523 | tig0019645:+121151 | Msa1375240:CDS |
| CTTCGGGAAGAAACAAGAGG+AGG | 0.712604 | tig0019645:-118690 | None:intergenic |
| GCAGATGTTATGGTGACTGG+AGG | 0.730564 | tig0019645:+120952 | Msa1375240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATTCTATTTAAATTAAA+AGG | + | tig0019645:119556-119575 | Msa1375240:intron | 10.0% |
| !!! | AAAAACAATTTTTTTTTACA+GGG | - | tig0019645:124436-124455 | None:intergenic | 10.0% |
| !!! | GACAGTTATTTTTTAAAAAA+TGG | + | tig0019645:119246-119265 | Msa1375240:intron | 15.0% |
| !! | TTAAAAAATGGTTGTAATAT+AGG | + | tig0019645:119258-119277 | Msa1375240:intron | 15.0% |
| !!! | TTTTAACTTCAAAATTAATC+AGG | + | tig0019645:119933-119952 | Msa1375240:intron | 15.0% |
| !!! | TTTAACTTCAAAATTAATCA+GGG | + | tig0019645:119934-119953 | Msa1375240:intron | 15.0% |
| !! | AAAAAAAAAAAACTTGAATG+AGG | - | tig0019645:120077-120096 | None:intergenic | 15.0% |
| !!! | TTATAAGTTTTTAACTCAAA+TGG | + | tig0019645:120698-120717 | Msa1375240:intron | 15.0% |
| !! | AAAATTATATCTGAAAAACA+GGG | + | tig0019645:120743-120762 | Msa1375240:intron | 15.0% |
| !!! | TACTTTTCATTTTGAAATTA+CGG | + | tig0019645:122861-122880 | Msa1375240:intron | 15.0% |
| !!! | TACATTTCTTGTTTAAATTA+CGG | - | tig0019645:122987-123006 | None:intergenic | 15.0% |
| !! | TTTAAGAGAAAAATTTGAAT+GGG | + | tig0019645:123575-123594 | Msa1375240:intron | 15.0% |
| !!! | TCTGAAATGAAATAAATATT+TGG | + | tig0019645:124361-124380 | Msa1375240:three_prime_UTR | 15.0% |
| !! | ATAAATATTTGGCTAAAATA+TGG | + | tig0019645:124372-124391 | Msa1375240:three_prime_UTR | 15.0% |
| !!! | CAAAAACAATTTTTTTTTAC+AGG | - | tig0019645:124437-124456 | None:intergenic | 15.0% |
| !!! | CTGTAAAAAAAAATTGTTTT+TGG | + | tig0019645:124435-124454 | Msa1375240:three_prime_UTR | 15.0% |
| !!! | AAAAAACAAAAAATTTTGCA+GGG | - | tig0019645:124462-124481 | None:intergenic | 15.0% |
| !!! | TAAAAAACAAAAAATTTTGC+AGG | - | tig0019645:124463-124482 | None:intergenic | 15.0% |
| !! | AACTAATTAATGGAAAATGT+GGG | + | tig0019645:118859-118878 | Msa1375240:CDS | 20.0% |
| !!! | ATTCAAACTGTTTTCATATA+AGG | + | tig0019645:119170-119189 | Msa1375240:intron | 20.0% |
| !!! | ATATGAAGTATTTGACATAT+TGG | + | tig0019645:119525-119544 | Msa1375240:intron | 20.0% |
| !! | AAGTATAAAGAAAACAAAGT+TGG | + | tig0019645:119635-119654 | Msa1375240:intron | 20.0% |
| !!! | GTGTTATTATAAGTTTCTTT+TGG | + | tig0019645:119662-119681 | Msa1375240:intron | 20.0% |
| !! | TTAACTTCAAAATTAATCAG+GGG | + | tig0019645:119935-119954 | Msa1375240:intron | 20.0% |
| !! | AAAAACTACTTTCGATTTAT+TGG | + | tig0019645:120277-120296 | Msa1375240:intron | 20.0% |
| !!! | TAATTTTTTCTGATTGGATA+TGG | - | tig0019645:120562-120581 | None:intergenic | 20.0% |
| !! | GAAAATTATATCTGAAAAAC+AGG | + | tig0019645:120742-120761 | Msa1375240:intron | 20.0% |
| !! | ACAAAGACAAATAACTAATA+AGG | - | tig0019645:121067-121086 | None:intergenic | 20.0% |
| !! | TGATACTTAAAAACTGATAT+TGG | + | tig0019645:121092-121111 | Msa1375240:intron | 20.0% |
| !! | TGAACATTAAGCAAAATAAA+TGG | - | tig0019645:121249-121268 | None:intergenic | 20.0% |
| !! | GGAAATGAATAAACAAAAAA+AGG | - | tig0019645:121440-121459 | None:intergenic | 20.0% |
| !! | ACTTATTATGTATGAATAAG+TGG | + | tig0019645:121772-121791 | Msa1375240:intron | 20.0% |
| !! | CTTATTATGTATGAATAAGT+GGG | + | tig0019645:121773-121792 | Msa1375240:intron | 20.0% |
| !! | CCAACAAAAAAAAAAACTTT+GGG | - | tig0019645:121895-121914 | None:intergenic | 20.0% |
| !! | TCCAACAAAAAAAAAAACTT+TGG | - | tig0019645:121896-121915 | None:intergenic | 20.0% |
| !!! | TTTATAACTCTAAAACCTTT+GGG | - | tig0019645:122053-122072 | None:intergenic | 20.0% |
| !!! | TTTTATAACTCTAAAACCTT+TGG | - | tig0019645:122054-122073 | None:intergenic | 20.0% |
| !! | AGTGACAATTAAAGTTAAAA+AGG | - | tig0019645:122534-122553 | None:intergenic | 20.0% |
| !!! | TTTTTATATTCAAGTGCTTT+TGG | + | tig0019645:122744-122763 | Msa1375240:intron | 20.0% |
| !!! | TTTTGGCATATATTATTTCA+GGG | + | tig0019645:122761-122780 | Msa1375240:intron | 20.0% |
| !! | TTTGATATCATTAACACTTA+GGG | - | tig0019645:123054-123073 | None:intergenic | 20.0% |
| !! | AATATTCAAACTTAAATTGC+TGG | - | tig0019645:123271-123290 | None:intergenic | 20.0% |
| !! | TTAAGAGAAAAATTTGAATG+GGG | + | tig0019645:123576-123595 | Msa1375240:intron | 20.0% |
| !! | CTTGTTAAATTAAGAGTTAA+TGG | - | tig0019645:123876-123895 | None:intergenic | 20.0% |
| !! | CATTAACTCTTAATTTAACA+AGG | + | tig0019645:123874-123893 | Msa1375240:CDS | 20.0% |
| ! | TTATGAATGCATAATTTGAG+AGG | - | tig0019645:118746-118765 | None:intergenic | 25.0% |
| ! | AATAAAATCTCATGTATTCG+TGG | + | tig0019645:118766-118785 | Msa1375240:intron | 25.0% |
| !! | TTTTGAATTGTATGTAGGTT+TGG | + | tig0019645:118791-118810 | Msa1375240:intron | 25.0% |
| ! | TTTGAATTGTATGTAGGTTT+GGG | + | tig0019645:118792-118811 | Msa1375240:intron | 25.0% |
| !! | CACATTTTCCATTAATTAGT+TGG | - | tig0019645:118860-118879 | None:intergenic | 25.0% |
| ! | CAACTAATTAATGGAAAATG+TGG | + | tig0019645:118858-118877 | Msa1375240:CDS | 25.0% |
| ! | ACTAATTAATGGAAAATGTG+GGG | + | tig0019645:118860-118879 | Msa1375240:CDS | 25.0% |
| ! | CAATAAGCATAATAGTTGTT+CGG | - | tig0019645:119708-119727 | None:intergenic | 25.0% |
| ! | AAGCTCTTAAAGATTCTAAT+TGG | + | tig0019645:119816-119835 | Msa1375240:CDS | 25.0% |
| !! | ACGGTATGCAAATTTTTATA+TGG | + | tig0019645:119869-119888 | Msa1375240:intron | 25.0% |
| ! | TGAAGTTAAAATACAATGCA+AGG | - | tig0019645:119924-119943 | None:intergenic | 25.0% |
| ! | TAACTTCAAAATTAATCAGG+GGG | + | tig0019645:119936-119955 | Msa1375240:intron | 25.0% |
| !!! | TTAGTCCATTTTTTATACCA+CGG | + | tig0019645:120200-120219 | Msa1375240:CDS | 25.0% |
| ! | AATATCCGTGGTATAAAAAA+TGG | - | tig0019645:120208-120227 | None:intergenic | 25.0% |
| ! | ATATCTGCATAAGTTAGTAA+AGG | - | tig0019645:120368-120387 | None:intergenic | 25.0% |
| ! | TCTTTAGATATATAGAATGC+AGG | + | tig0019645:120411-120430 | Msa1375240:intron | 25.0% |
| !!! | TTTTAAAAGAGTAAGAAGCA+TGG | - | tig0019645:120527-120546 | None:intergenic | 25.0% |
| ! | CAATGAGAATGATTCAATTT+GGG | + | tig0019645:120926-120945 | Msa1375240:CDS | 25.0% |
| ! | AATGAGAATGATTCAATTTG+GGG | + | tig0019645:120927-120946 | Msa1375240:CDS | 25.0% |
| !!! | AATTGATAATGCATCAATAC+TGG | - | tig0019645:120986-121005 | None:intergenic | 25.0% |
| ! | AAGACAAATAACTAATAAGG+TGG | - | tig0019645:121064-121083 | None:intergenic | 25.0% |
| !!! | ATCAGTTTTTAAGTATCAGA+GGG | - | tig0019645:121090-121109 | None:intergenic | 25.0% |
| !!! | TATCAGTTTTTAAGTATCAG+AGG | - | tig0019645:121091-121110 | None:intergenic | 25.0% |
| !! | TGAGTTATATTTTGTACTCA+AGG | - | tig0019645:121133-121152 | None:intergenic | 25.0% |
| !!! | TTTGCTTAATGTTCACTTTT+TGG | + | tig0019645:121254-121273 | Msa1375240:intron | 25.0% |
| !!! | TCCAATTTATGTTTTTACTC+AGG | + | tig0019645:121313-121332 | Msa1375240:intron | 25.0% |
| ! | TCCTGAGTAAAAACATAAAT+TGG | - | tig0019645:121317-121336 | None:intergenic | 25.0% |
| !!! | TTTATGTTTTTACTCAGGAT+AGG | + | tig0019645:121318-121337 | Msa1375240:intron | 25.0% |
| !!! | GGTAAGTTAAATTTTTTGTG+TGG | + | tig0019645:121368-121387 | Msa1375240:intron | 25.0% |
| ! | TATTCATTTCCCTATTGTTT+AGG | + | tig0019645:121449-121468 | Msa1375240:intron | 25.0% |
| !!! | ATTTCATATGGATTTTGACT+AGG | + | tig0019645:121601-121620 | Msa1375240:intron | 25.0% |
| !!! | TTTCATATGGATTTTGACTA+GGG | + | tig0019645:121602-121621 | Msa1375240:intron | 25.0% |
| ! | TAACAAATACAAAGCAACAT+AGG | - | tig0019645:121716-121735 | None:intergenic | 25.0% |
| !! | AAAAAAAAAACTTTGGGAGA+GGG | - | tig0019645:121889-121908 | None:intergenic | 25.0% |
| !! | AAAAAAAAAAACTTTGGGAG+AGG | - | tig0019645:121890-121909 | None:intergenic | 25.0% |
| !!! | CCCAAAGTTTTTTTTTTTGT+TGG | + | tig0019645:121892-121911 | Msa1375240:intron | 25.0% |
| !!! | CCATTCTAGTTTTGTTATTA+GGG | + | tig0019645:122302-122321 | Msa1375240:intron | 25.0% |
| ! | GATAATAAGAGAAATAGAAC+AGG | - | tig0019645:122477-122496 | None:intergenic | 25.0% |
| !! | GTAATATGTTTGTTAGTAGT+TGG | - | tig0019645:122507-122526 | None:intergenic | 25.0% |
| ! | TGAATGAAATTATCATGTGA+AGG | + | tig0019645:122719-122738 | Msa1375240:intron | 25.0% |
| !! | CTTTTGGCATATATTATTTC+AGG | + | tig0019645:122760-122779 | Msa1375240:intron | 25.0% |
| ! | GTTTGATATCATTAACACTT+AGG | - | tig0019645:123055-123074 | None:intergenic | 25.0% |
| ! | GAAAACACAACAATACAATA+TGG | - | tig0019645:123085-123104 | None:intergenic | 25.0% |
| ! | AAATTATATGCTCATCTGTT+TGG | + | tig0019645:123480-123499 | Msa1375240:intron | 25.0% |
| ! | ATAGATTAAGCACAAATTCA+CGG | - | tig0019645:123787-123806 | None:intergenic | 25.0% |
| ! | ACTATTAGATTAAGCATACA+GGG | - | tig0019645:123817-123836 | None:intergenic | 25.0% |
| !! | ATATGCTACAAAAAGCTTTT+AGG | - | tig0019645:124116-124135 | None:intergenic | 25.0% |
| ! | CAATTGGAATAATCATAAGA+GGG | - | tig0019645:124240-124259 | None:intergenic | 25.0% |
| ! | ATCTATTAAAACGTCTTACA+GGG | - | tig0019645:124493-124512 | None:intergenic | 25.0% |
| ! | TTAACACAGTTAAATGATCT+CGG | - | tig0019645:124542-124561 | None:intergenic | 25.0% |
| ! | AAATCACAATCATTGATATC+AGG | - | tig0019645:124587-124606 | None:intergenic | 25.0% |
| ! | AAGCTTTATCTGATATGCTT+CGG | - | tig0019645:118662-118681 | None:intergenic | 30.0% |
| ! | TGGCTTTTTGAATTGTATGT+AGG | + | tig0019645:118786-118805 | Msa1375240:intron | 30.0% |
| !! | TTAGTTGGTTCCAAGTTTTA+TGG | - | tig0019645:118845-118864 | None:intergenic | 30.0% |
| ACTTGGAACCAACTAATTAA+TGG | + | tig0019645:118849-118868 | Msa1375240:CDS | 30.0% | |
| TAGAATTAAGCCAAATTTCG+TGG | - | tig0019645:119016-119035 | None:intergenic | 30.0% | |
| ! | CGAAATTTGGCTTAATTCTA+AGG | + | tig0019645:119016-119035 | Msa1375240:CDS | 30.0% |
| CGATAAACGTCTTAATTAAG+TGG | + | tig0019645:119102-119121 | Msa1375240:intron | 30.0% | |
| ! | GTATAGAGAAAAGTGTAAAC+TGG | + | tig0019645:119192-119211 | Msa1375240:intron | 30.0% |
| ATATAGGCTTACATGACAAT+AGG | + | tig0019645:119274-119293 | Msa1375240:intron | 30.0% | |
| TATAGGCTTACATGACAATA+GGG | + | tig0019645:119275-119294 | Msa1375240:intron | 30.0% | |
| ! | AATAAGCTAAAACCAGCTTT+TGG | + | tig0019645:119362-119381 | Msa1375240:intron | 30.0% |
| ! | TATTCTCCTCTAAGAACTTA+TGG | - | tig0019645:119508-119527 | None:intergenic | 30.0% |
| CGAACAACTATTATGCTTAT+TGG | + | tig0019645:119706-119725 | Msa1375240:intron | 30.0% | |
| GAAATGTCACAATACTACAA+TGG | - | tig0019645:119738-119757 | None:intergenic | 30.0% | |
| ATATGCTATAAACCTTGTCA+CGG | - | tig0019645:119777-119796 | None:intergenic | 30.0% | |
| ! | AGAATCTTTAAGAGCTTCAT+TGG | - | tig0019645:119813-119832 | None:intergenic | 30.0% |
| !! | GTGGTATAAAAAATGGACTA+AGG | - | tig0019645:120201-120220 | None:intergenic | 30.0% |
| ATATTGATAAACATGGCATC+AGG | + | tig0019645:120223-120242 | Msa1375240:CDS | 30.0% | |
| !!! | ATCGAAAGTAGTTTTTTACC+TGG | - | tig0019645:120273-120292 | None:intergenic | 30.0% |
| TAAGTTAGTAAAGGACAATG+TGG | - | tig0019645:120359-120378 | None:intergenic | 30.0% | |
| TTCTAAATCAGTTTCACACA+AGG | - | tig0019645:120487-120506 | None:intergenic | 30.0% | |
| ATAATTATATCCGAAGTGAC+AGG | - | tig0019645:120621-120640 | None:intergenic | 30.0% | |
| !!! | TCAACCATGTTTTAAGAGAT+TGG | + | tig0019645:120642-120661 | Msa1375240:intron | 30.0% |
| CTAACCAATCTCTTAAAACA+TGG | - | tig0019645:120649-120668 | None:intergenic | 30.0% | |
| AATGGTTGCAATTTAGAGAT+TGG | + | tig0019645:120716-120735 | Msa1375240:intron | 30.0% | |
| ! | TGAAAAACAGGGTATTAAAC+TGG | + | tig0019645:120754-120773 | Msa1375240:intron | 30.0% |
| ! | TATTAAACTGGTTGTTGTTG+TGG | + | tig0019645:120766-120785 | Msa1375240:intron | 30.0% |
| GCAATGAGAATGATTCAATT+TGG | + | tig0019645:120925-120944 | Msa1375240:CDS | 30.0% | |
| ATTGATGCATTATCAATTGC+AGG | + | tig0019645:120988-121007 | Msa1375240:CDS | 30.0% | |
| CAAATAACTAATAAGGTGGT+TGG | - | tig0019645:121060-121079 | None:intergenic | 30.0% | |
| AAAAACTGATATTGGAATGC+AGG | + | tig0019645:121100-121119 | Msa1375240:intron | 30.0% | |
| CTTCAAATTATTGCTCTGTT+TGG | + | tig0019645:121277-121296 | Msa1375240:intron | 30.0% | |
| ATTATAAACAGAAGGAGAAC+AGG | - | tig0019645:121413-121432 | None:intergenic | 30.0% | |
| AAGGTCAGATTATAAACAGA+AGG | - | tig0019645:121421-121440 | None:intergenic | 30.0% | |
| GATGTCAGGTAATTTATTGT+AGG | + | tig0019645:121530-121549 | Msa1375240:intron | 30.0% | |
| ! | GTGGTTGATTTCATTTCATA+TGG | + | tig0019645:121589-121608 | Msa1375240:intron | 30.0% |
| !!! | TTCATATGGATTTTGACTAG+GGG | + | tig0019645:121603-121622 | Msa1375240:intron | 30.0% |
| ATTATGTATGAATAAGTGGG+AGG | + | tig0019645:121776-121795 | Msa1375240:intron | 30.0% | |
| ACATTGATGGAAAAGACAAA+GGG | - | tig0019645:122091-122110 | None:intergenic | 30.0% | |
| ACTATATAAGCTTGGCTATT+TGG | + | tig0019645:122121-122140 | Msa1375240:intron | 30.0% | |
| ! | AATAGTTCTTTTGTGAAGAG+TGG | - | tig0019645:122209-122228 | None:intergenic | 30.0% |
| ACTCTTCACAAAAGAACTAT+TGG | + | tig0019645:122208-122227 | Msa1375240:intron | 30.0% | |
| TTCACAAAAGAACTATTGGT+TGG | + | tig0019645:122212-122231 | Msa1375240:intron | 30.0% | |
| !!! | GCCATTCTAGTTTTGTTATT+AGG | + | tig0019645:122301-122320 | Msa1375240:intron | 30.0% |
| CCCTAATAACAAAACTAGAA+TGG | - | tig0019645:122305-122324 | None:intergenic | 30.0% | |
| CCAATAAATAGAGAATGAGA+GGG | - | tig0019645:122451-122470 | None:intergenic | 30.0% | |
| TACCTATTCAGAAGAAACTA+AGG | + | tig0019645:122793-122812 | Msa1375240:CDS | 30.0% | |
| ACCTATTCAGAAGAAACTAA+GGG | + | tig0019645:122794-122813 | Msa1375240:CDS | 30.0% | |
| CCTGACTGAAATATATGAAA+AGG | - | tig0019645:123162-123181 | None:intergenic | 30.0% | |
| ! | CCTTTTCATATATTTCAGTC+AGG | + | tig0019645:123159-123178 | Msa1375240:intron | 30.0% |
| TTGATGTAATCTACATCAGA+AGG | - | tig0019645:123192-123211 | None:intergenic | 30.0% | |
| ATGTTTGAATACTACAACAG+TGG | + | tig0019645:123295-123314 | Msa1375240:intron | 30.0% | |
| ATCACCTGTATAAAGAATTC+TGG | - | tig0019645:123352-123371 | None:intergenic | 30.0% | |
| ! | CAGATGAGCATATAATTTGT+TGG | - | tig0019645:123478-123497 | None:intergenic | 30.0% |
| GTGAAATTATGGAACAGTTA+TGG | - | tig0019645:123627-123646 | None:intergenic | 30.0% | |
| !! | TCCATAATTTCACTGATTTC+AGG | + | tig0019645:123634-123653 | Msa1375240:intron | 30.0% |
| !! | CCATAATTTCACTGATTTCA+GGG | + | tig0019645:123635-123654 | Msa1375240:intron | 30.0% |
| !! | CATAATTTCACTGATTTCAG+GGG | + | tig0019645:123636-123655 | Msa1375240:intron | 30.0% |
| !! | ATAATTTCACTGATTTCAGG+GGG | + | tig0019645:123637-123656 | Msa1375240:intron | 30.0% |
| CACTATTAGATTAAGCATAC+AGG | - | tig0019645:123818-123837 | None:intergenic | 30.0% | |
| GTATGCTTAATCTAATAGTG+CGG | + | tig0019645:123818-123837 | Msa1375240:intron | 30.0% | |
| TTTGACATAGCTACTCTAAT+TGG | - | tig0019645:123954-123973 | None:intergenic | 30.0% | |
| !!! | ATGTCAAACTCTTTTGGTTT+TGG | + | tig0019645:123966-123985 | Msa1375240:CDS | 30.0% |
| !!! | CAGAGCAGTTTTAAAATGTA+AGG | - | tig0019645:124166-124185 | None:intergenic | 30.0% |
| GCAATTGGAATAATCATAAG+AGG | - | tig0019645:124241-124260 | None:intergenic | 30.0% | |
| TGTATGGTGCAATTCTAAAT+AGG | + | tig0019645:124284-124303 | Msa1375240:three_prime_UTR | 30.0% | |
| GATCTATTAAAACGTCTTAC+AGG | - | tig0019645:124494-124513 | None:intergenic | 30.0% | |
| ATCATTGATATCAGGTTAGA+CGG | - | tig0019645:124579-124598 | None:intergenic | 30.0% | |
| !! | TGAGTGTAGTTTGTTTGTGA+TGG | + | tig0019645:118593-118612 | Msa1375240:exon | 35.0% |
| ATCTGATATGCTTCGGTAAA+TGG | - | tig0019645:118655-118674 | None:intergenic | 35.0% | |
| ATGCATAATTTGAGAGGAGA+TGG | - | tig0019645:118740-118759 | None:intergenic | 35.0% | |
| TTAATGGAAAATGTGGGGTA+AGG | + | tig0019645:118865-118884 | Msa1375240:CDS | 35.0% | |
| TAATGGAAAATGTGGGGTAA+GGG | + | tig0019645:118866-118885 | Msa1375240:CDS | 35.0% | |
| GGAAGTCAATTGATCAAATG+TGG | - | tig0019645:118946-118965 | None:intergenic | 35.0% | |
| GTGAATTCAACCACGAAATT+TGG | + | tig0019645:119003-119022 | Msa1375240:CDS | 35.0% | |
| TAGCATAGCTTATGAAGAGA+CGG | - | tig0019645:119329-119348 | None:intergenic | 35.0% | |
| AAGCTATGCTAGAGAACTTA+CGG | + | tig0019645:119338-119357 | Msa1375240:intron | 35.0% | |
| ! | AGATTGCTTTCTTTCAAGTC+AGG | - | tig0019645:119599-119618 | None:intergenic | 35.0% |
| AGTATTGTGACATTTCCCTT+AGG | + | tig0019645:119742-119761 | Msa1375240:intron | 35.0% | |
| TGCTCAACTGATATGTGAAA+AGG | + | tig0019645:120005-120024 | Msa1375240:CDS | 35.0% | |
| ACCACGGATATTGATAAACA+TGG | + | tig0019645:120216-120235 | Msa1375240:CDS | 35.0% | |
| !!! | GGTCGCTAATTTTTTCTGAT+TGG | - | tig0019645:120568-120587 | None:intergenic | 35.0% |
| ! | GAGCTCTATCTTATTTCAAG+AGG | - | tig0019645:120589-120608 | None:intergenic | 35.0% |
| ! | AAGAGATTGGTTAGTCAATC+AGG | + | tig0019645:120655-120674 | Msa1375240:intron | 35.0% |
| ! | TTTTCCCTATTCCTGAATAC+AGG | + | tig0019645:120846-120865 | Msa1375240:intron | 35.0% |
| TTTCCCTATTCCTGAATACA+GGG | + | tig0019645:120847-120866 | Msa1375240:intron | 35.0% | |
| TAATGCATCAATACTGGACT+CGG | - | tig0019645:120980-120999 | None:intergenic | 35.0% | |
| TGGCACTAACATAAAACACA+AGG | - | tig0019645:121040-121059 | None:intergenic | 35.0% | |
| ! | TTTTTACTCAGGATAGGTGA+AGG | + | tig0019645:121324-121343 | Msa1375240:intron | 35.0% |
| GCTCAAGTTCCTAAACAATA+GGG | - | tig0019645:121461-121480 | None:intergenic | 35.0% | |
| TGCTCAAGTTCCTAAACAAT+AGG | - | tig0019645:121462-121481 | None:intergenic | 35.0% | |
| ! | ACGAATCTCTCCATAGATTT+TGG | - | tig0019645:121502-121521 | None:intergenic | 35.0% |
| AAAATCTATGGAGAGATTCG+TGG | + | tig0019645:121501-121520 | Msa1375240:CDS | 35.0% | |
| CACAAATAAAGCTAAGACTG+GGG | - | tig0019645:121572-121591 | None:intergenic | 35.0% | |
| CCACAAATAAAGCTAAGACT+GGG | - | tig0019645:121573-121592 | None:intergenic | 35.0% | |
| ACCACAAATAAAGCTAAGAC+TGG | - | tig0019645:121574-121593 | None:intergenic | 35.0% | |
| ACTCAAGTCCAAATTCTAAG+AGG | + | tig0019645:121839-121858 | Msa1375240:intron | 35.0% | |
| TATGCCAAAGTTAGAGTTGA+GGG | - | tig0019645:121943-121962 | None:intergenic | 35.0% | |
| TTATGCCAAAGTTAGAGTTG+AGG | - | tig0019645:121944-121963 | None:intergenic | 35.0% | |
| ATTGATGGAAAAGACAAAGG+GGG | - | tig0019645:122089-122108 | None:intergenic | 35.0% | |
| CATTGATGGAAAAGACAAAG+GGG | - | tig0019645:122090-122109 | None:intergenic | 35.0% | |
| GACATTGATGGAAAAGACAA+AGG | - | tig0019645:122092-122111 | None:intergenic | 35.0% | |
| CCCTCTCATTCTCTATTTAT+TGG | + | tig0019645:122448-122467 | Msa1375240:intron | 35.0% | |
| GCCAATAAATAGAGAATGAG+AGG | - | tig0019645:122452-122471 | None:intergenic | 35.0% | |
| TTTGTTAGTAGTTGGAAGCT+GGG | - | tig0019645:122499-122518 | None:intergenic | 35.0% | |
| TGCTAATATCTAACCAGTAC+TGG | - | tig0019645:122614-122633 | None:intergenic | 35.0% | |
| ACCCTTAGTTTCTTCTGAAT+AGG | - | tig0019645:122798-122817 | None:intergenic | 35.0% | |
| ATTAACACTTAGGGTGTGTT+TGG | - | tig0019645:123045-123064 | None:intergenic | 35.0% | |
| CTCACCAGAATTCTTTATAC+AGG | + | tig0019645:123345-123364 | Msa1375240:intron | 35.0% | |
| ATGAGAGCTTTCATCTAAGA+GGG | - | tig0019645:123528-123547 | None:intergenic | 35.0% | |
| AATGAGAGCTTTCATCTAAG+AGG | - | tig0019645:123529-123548 | None:intergenic | 35.0% | |
| TAGATGAAAGCTCTCATTCA+TGG | + | tig0019645:123531-123550 | Msa1375240:intron | 35.0% | |
| AGATGAAAGCTCTCATTCAT+GGG | + | tig0019645:123532-123551 | Msa1375240:intron | 35.0% | |
| CCCTGAAATCAGTGAAATTA+TGG | - | tig0019645:123638-123657 | None:intergenic | 35.0% | |
| TCAAAACGTTGCTTACATGT+CGG | - | tig0019645:123724-123743 | None:intergenic | 35.0% | |
| ! | TCTTTTGATGTTCTTATCCC+AGG | + | tig0019645:123842-123861 | Msa1375240:intron | 35.0% |
| ! | CTTTTGATGTTCTTATCCCA+GGG | + | tig0019645:123843-123862 | Msa1375240:intron | 35.0% |
| TTGTCACCAAATACAGAATC+TGG | - | tig0019645:123900-123919 | None:intergenic | 35.0% | |
| ! | GTAGCTATGTCAAACTCTTT+TGG | + | tig0019645:123960-123979 | Msa1375240:CDS | 35.0% |
| !!! | TCAAACTCTTTTGGTTTTGG+AGG | + | tig0019645:123969-123988 | Msa1375240:CDS | 35.0% |
| TCCAGAGTAAGCAAAAAGTA+GGG | - | tig0019645:124006-124025 | None:intergenic | 35.0% | |
| ATCCAGAGTAAGCAAAAAGT+AGG | - | tig0019645:124007-124026 | None:intergenic | 35.0% | |
| ! | ACTTTTTGCTTACTCTGGAT+CGG | + | tig0019645:124007-124026 | Msa1375240:CDS | 35.0% |
| TCATGCTGAGGAGAATTTAA+TGG | + | tig0019645:124090-124109 | Msa1375240:three_prime_UTR | 35.0% | |
| AGATGTTCTCACAATGCAAT+TGG | - | tig0019645:124256-124275 | None:intergenic | 35.0% | |
| AATTGCATTGTGAGAACATC+TGG | + | tig0019645:124255-124274 | Msa1375240:three_prime_UTR | 35.0% | |
| TAGAATTGCACCATACATCA+TGG | - | tig0019645:124281-124300 | None:intergenic | 35.0% | |
| TTCTAAATAGGTCAGGAATC+AGG | + | tig0019645:124296-124315 | Msa1375240:three_prime_UTR | 35.0% | |
| CAAAACGAGACATATTTGCA+GGG | - | tig0019645:124405-124424 | None:intergenic | 35.0% | |
| TCTCGGTCATTGATCTAAAT+CGG | - | tig0019645:124525-124544 | None:intergenic | 35.0% | |
| CACAAACAAACTACACTCAC+TGG | - | tig0019645:118592-118611 | None:intergenic | 40.0% | |
| ATTGTATGTAGGTTTGGGCA+TGG | + | tig0019645:118797-118816 | Msa1375240:intron | 40.0% | |
| GTTGTGGAGTCCATAAAACT+TGG | + | tig0019645:118832-118851 | Msa1375240:CDS | 40.0% | |
| TTTCGTGGTTGAATTCACCA+GGG | - | tig0019645:119001-119020 | None:intergenic | 40.0% | |
| ATTTCGTGGTTGAATTCACC+AGG | - | tig0019645:119002-119021 | None:intergenic | 40.0% | |
| CTTATGACATGTCCAAAAGC+TGG | - | tig0019645:119377-119396 | None:intergenic | 40.0% | |
| ! | CCATGGTCTTAGAGTATGTT+TGG | - | tig0019645:119469-119488 | None:intergenic | 40.0% |
| !! | CCAAACATACTCTAAGACCA+TGG | + | tig0019645:119466-119485 | Msa1375240:intron | 40.0% |
| ! | CCTCTAAGAACTTATGGCAA+TGG | - | tig0019645:119502-119521 | None:intergenic | 40.0% |
| CCATTGCCATAAGTTCTTAG+AGG | + | tig0019645:119499-119518 | Msa1375240:intron | 40.0% | |
| !! | ATTAATCAGGGGGTGTCTAT+TGG | + | tig0019645:119946-119965 | Msa1375240:intron | 40.0% |
| TATGTGAAAAGGTCAGTTCG+TGG | + | tig0019645:120016-120035 | Msa1375240:intron | 40.0% | |
| !! | CTGATTCTGAAGTAGTTTGC+TGG | + | tig0019645:120046-120065 | Msa1375240:intron | 40.0% |
| GCCATGTTTATCAATATCCG+TGG | - | tig0019645:120220-120239 | None:intergenic | 40.0% | |
| GCCACGTTAGCATGAAATAT+GGG | + | tig0019645:120245-120264 | Msa1375240:CDS | 40.0% | |
| ACCCATATTTCATGCTAACG+TGG | - | tig0019645:120249-120268 | None:intergenic | 40.0% | |
| TAGCATGAAATATGGGTTCC+AGG | + | tig0019645:120252-120271 | Msa1375240:CDS | 40.0% | |
| TTATATCCGAAGTGACAGGT+AGG | - | tig0019645:120617-120636 | None:intergenic | 40.0% | |
| AGTCAATCAGGACATATCTC+AGG | + | tig0019645:120667-120686 | Msa1375240:intron | 40.0% | |
| TTCCCTATTCCTGAATACAG+GGG | + | tig0019645:120848-120867 | Msa1375240:intron | 40.0% | |
| ATTTGGGGATGCAGATGTTA+TGG | + | tig0019645:120942-120961 | Msa1375240:CDS | 40.0% | |
| AACAGAAGGAGAACAGGAAT+TGG | - | tig0019645:121407-121426 | None:intergenic | 40.0% | |
| !! | CCCAGTCTTAGCTTTATTTG+TGG | + | tig0019645:121570-121589 | Msa1375240:intron | 40.0% |
| ATTACTCAACCTCCTAGTGA+TGG | + | tig0019645:121637-121656 | Msa1375240:CDS | 40.0% | |
| TTACTCAACCTCCTAGTGAT+GGG | + | tig0019645:121638-121657 | Msa1375240:CDS | 40.0% | |
| !!! | CTGTTTTAAAGCACGAGTCA+TGG | - | tig0019645:121680-121699 | None:intergenic | 40.0% |
| !! | CATGACTCGTGCTTTAAAAC+AGG | + | tig0019645:121678-121697 | Msa1375240:CDS | 40.0% |
| TTCACCCTCAACTCTAACTT+TGG | + | tig0019645:121936-121955 | Msa1375240:intron | 40.0% | |
| ! | TGACCAATATTCAAGCATCG+AGG | + | tig0019645:121973-121992 | Msa1375240:intron | 40.0% |
| AGACCTCGATGCTTGAATAT+TGG | - | tig0019645:121979-121998 | None:intergenic | 40.0% | |
| !! | AATATTCAAGCATCGAGGTC+TGG | + | tig0019645:121978-121997 | Msa1375240:intron | 40.0% |
| ! | CTTTTCCATCAATGTCACTG+TGG | + | tig0019645:122096-122115 | Msa1375240:intron | 40.0% |
| CTGTGGCTACTATATAAGCT+TGG | + | tig0019645:122113-122132 | Msa1375240:intron | 40.0% | |
| ! | GTTCTTTTGTGAAGAGTGGT+GGG | - | tig0019645:122205-122224 | None:intergenic | 40.0% |
| ! | AGTTCTTTTGTGAAGAGTGG+TGG | - | tig0019645:122206-122225 | None:intergenic | 40.0% |
| AGTGGTAACCCAGAATTTCT+AGG | + | tig0019645:122374-122393 | Msa1375240:intron | 40.0% | |
| GTGGTAACCCAGAATTTCTA+GGG | + | tig0019645:122375-122394 | Msa1375240:intron | 40.0% | |
| ATTGGACATAGGGAGATTTG+CGG | - | tig0019645:122402-122421 | None:intergenic | 40.0% | |
| ! | ATACTGTCATTTGAGTGAGC+TGG | - | tig0019645:122428-122447 | None:intergenic | 40.0% |
| ! | GTTTGTTAGTAGTTGGAAGC+TGG | - | tig0019645:122500-122519 | None:intergenic | 40.0% |
| ! | TACTGGTTGTGGCAAAAGTA+TGG | - | tig0019645:122597-122616 | None:intergenic | 40.0% |
| !! | TATCTAACCAGTACTGGTTG+TGG | - | tig0019645:122608-122627 | None:intergenic | 40.0% |
| ! | GAAGAAACTAAGGGTGTGTT+TGG | + | tig0019645:122803-122822 | Msa1375240:CDS | 40.0% |
| ! | AAACTAAGGGTGTGTTTGGA+TGG | + | tig0019645:122807-122826 | Msa1375240:CDS | 40.0% |
| TTTGGATGGAGGGTTTAGAA+GGG | + | tig0019645:122821-122840 | Msa1375240:intron | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | - | tig0019645:123027-123046 | None:intergenic | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | - | tig0019645:123031-123050 | None:intergenic | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | - | tig0019645:123037-123056 | None:intergenic | 40.0% | |
| CATGCTACATCTACACCTTT+AGG | + | tig0019645:123216-123235 | Msa1375240:CDS | 40.0% | |
| TTAAATTGCTGGAATCCGTG+AGG | - | tig0019645:123260-123279 | None:intergenic | 40.0% | |
| TGAGAGCTTTCATCTAAGAG+GGG | - | tig0019645:123527-123546 | None:intergenic | 40.0% | |
| AAAGCTCTCATTCATGGGAA+TGG | + | tig0019645:123537-123556 | Msa1375240:intron | 40.0% | |
| TAGATTAAGCATACAGGGTC+TGG | - | tig0019645:123812-123831 | None:intergenic | 40.0% | |
| ACAAGGCCAGATTCTGTATT+TGG | + | tig0019645:123891-123910 | Msa1375240:CDS | 40.0% | |
| !! | ATCTCCTTTGAAGCAGTCAA+TGG | - | tig0019645:123930-123949 | None:intergenic | 40.0% |
| !!! | TCCCTACTTTTTGCTTACTC+TGG | + | tig0019645:124002-124021 | Msa1375240:CDS | 40.0% |
| TAAGGAAAAGCTCGTACTTC+AGG | - | tig0019645:124148-124167 | None:intergenic | 40.0% | |
| GGTGCAATTCTAAATAGGTC+AGG | + | tig0019645:124289-124308 | Msa1375240:three_prime_UTR | 40.0% | |
| AAATAGGTCAGGAATCAGGA+TGG | + | tig0019645:124300-124319 | Msa1375240:three_prime_UTR | 40.0% | |
| CCAAAACGAGACATATTTGC+AGG | - | tig0019645:124406-124425 | None:intergenic | 40.0% | |
| ! | CCTGCAAATATGTCTCGTTT+TGG | + | tig0019645:124403-124422 | Msa1375240:three_prime_UTR | 40.0% |
| GGTCATTGATCTAAATCGGA+TGG | - | tig0019645:124521-124540 | None:intergenic | 40.0% | |
| TTGTTTGTGATGGCAATGCG+TGG | + | tig0019645:118603-118622 | Msa1375240:exon | 45.0% | |
| ACTCTTCGGGAAGAAACAAG+AGG | - | tig0019645:118696-118715 | None:intergenic | 45.0% | |
| AACCGGTGACAACTACTCTT+CGG | - | tig0019645:118710-118729 | None:intergenic | 45.0% | |
| GAGGAGATGGAGTTACTAAC+CGG | - | tig0019645:118727-118746 | None:intergenic | 45.0% | |
| TTATGGACTCCACAACCAAG+AGG | - | tig0019645:118828-118847 | None:intergenic | 45.0% | |
| CTCTCTCAAGTAGTCTCCTA+GGG | + | tig0019645:119409-119428 | Msa1375240:intron | 45.0% | |
| TCTCTCAAGTAGTCTCCTAG+GGG | + | tig0019645:119410-119429 | Msa1375240:intron | 45.0% | |
| ATCTACTAGCATAGTCCCCT+AGG | - | tig0019645:119428-119447 | None:intergenic | 45.0% | |
| TCACGGATCGATGTTCCTAA+GGG | - | tig0019645:119760-119779 | None:intergenic | 45.0% | |
| ! | TAATTGGTTTCCCACTGAGC+AGG | + | tig0019645:119832-119851 | Msa1375240:CDS | 45.0% |
| GCAGGAACACAAGGAAAGAA+CGG | + | tig0019645:119850-119869 | Msa1375240:CDS | 45.0% | |
| GGCCACGTTAGCATGAAATA+TGG | + | tig0019645:120244-120263 | Msa1375240:CDS | 45.0% | |
| TAATGAGCTCCTGTAGTTGC+TGG | + | tig0019645:120325-120344 | Msa1375240:intron | 45.0% | |
| CAATCAGGACATATCTCAGG+TGG | + | tig0019645:120670-120689 | Msa1375240:intron | 45.0% | |
| ! | ATGATTTGGCCCCTGTATTC+AGG | - | tig0019645:120860-120879 | None:intergenic | 45.0% |
| GCTACTGGGTCACATTCTAT+TGG | + | tig0019645:120898-120917 | Msa1375240:CDS | 45.0% | |
| GATGCAGATGTTATGGTGAC+TGG | + | tig0019645:120949-120968 | Msa1375240:CDS | 45.0% | |
| CCATCTCGACCACTATCAAA+GGG | - | tig0019645:121177-121196 | None:intergenic | 45.0% | |
| TCCATCTCGACCACTATCAA+AGG | - | tig0019645:121178-121197 | None:intergenic | 45.0% | |
| GAAGGAGAACAGGAATTGGA+AGG | - | tig0019645:121403-121422 | None:intergenic | 45.0% | |
| CTTGAGCATGCTAAAAACCG+AGG | + | tig0019645:121474-121493 | Msa1375240:CDS | 45.0% | |
| AACCGAGGAGCCAAAATCTA+TGG | + | tig0019645:121489-121508 | Msa1375240:CDS | 45.0% | |
| !!! | CTCCATAGATTTTGGCTCCT+CGG | - | tig0019645:121494-121513 | None:intergenic | 45.0% |
| TATGGAGAGATTCGTGGCTA+TGG | + | tig0019645:121507-121526 | Msa1375240:CDS | 45.0% | |
| ATGGAGAGATTCGTGGCTAT+GGG | + | tig0019645:121508-121527 | Msa1375240:CDS | 45.0% | |
| TGAGTCTAACTCAACCCCAA+AGG | - | tig0019645:121824-121843 | None:intergenic | 45.0% | |
| AGGCTCGACCTCTTAGAATT+TGG | - | tig0019645:121850-121869 | None:intergenic | 45.0% | |
| TGATGTCAAGTCGTCAACCA+GGG | - | tig0019645:122030-122049 | None:intergenic | 45.0% | |
| AGTAGCCACAGTGACATTGA+TGG | - | tig0019645:122104-122123 | None:intergenic | 45.0% | |
| TAAGCTTGGCTATTTGGCGA+TGG | + | tig0019645:122127-122146 | Msa1375240:intron | 45.0% | |
| !!! | TTTTGTGAAGAGTGGTGGGT+GGG | - | tig0019645:122201-122220 | None:intergenic | 45.0% |
| AACTAGCAGCTATAGCGTAG+TGG | + | tig0019645:122247-122266 | Msa1375240:intron | 45.0% | |
| ACAACTGCTATGGCTGAAAC+TGG | - | tig0019645:122345-122364 | None:intergenic | 45.0% | |
| TTCAGCCATAGCAGTTGTAG+TGG | + | tig0019645:122347-122366 | Msa1375240:intron | 45.0% | |
| TACTGCCACTACAACTGCTA+TGG | - | tig0019645:122355-122374 | None:intergenic | 45.0% | |
| TTGCGGACCCTAGAAATTCT+GGG | - | tig0019645:122385-122404 | None:intergenic | 45.0% | |
| TTTGCGGACCCTAGAAATTC+TGG | - | tig0019645:122386-122405 | None:intergenic | 45.0% | |
| ! | ACTTTTGCCACAACCAGTAC+TGG | + | tig0019645:122598-122617 | Msa1375240:intron | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | + | tig0019645:122811-122830 | Msa1375240:CDS | 45.0% |
| GTTTGGATGGAGGGTTTAGA+AGG | + | tig0019645:122820-122839 | Msa1375240:intron | 45.0% | |
| TTGGATGGAGGGTTTAGAAG+GGG | + | tig0019645:122822-122841 | Msa1375240:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | - | tig0019645:123026-123045 | None:intergenic | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | - | tig0019645:123028-123047 | None:intergenic | 45.0% | |
| CTTAGGGTGTGTTTGGATTG+AGG | - | tig0019645:123038-123057 | None:intergenic | 45.0% | |
| GATCTGCTTCACTTGCCTAA+AGG | - | tig0019645:123234-123253 | None:intergenic | 45.0% | |
| GCTAGCATGGTCAGAGAATA+TGG | - | tig0019645:123400-123419 | None:intergenic | 45.0% | |
| CTAAAGAAGACGAGCTAGCA+TGG | - | tig0019645:123413-123432 | None:intergenic | 45.0% | |
| ! | TTTAGCCTTCTCATCCACCA+AGG | + | tig0019645:123428-123447 | Msa1375240:CDS | 45.0% |
| ! | TCTTACCTTGGTGGATGAGA+AGG | - | tig0019645:123436-123455 | None:intergenic | 45.0% |
| GAGAGCTTTCATCTAAGAGG+GGG | - | tig0019645:123526-123545 | None:intergenic | 45.0% | |
| ! | GACATTTTGTGTGCGAGTCA+CGG | + | tig0019645:123742-123761 | Msa1375240:intron | 45.0% |
| ! | ACATTTTGTGTGCGAGTCAC+GGG | + | tig0019645:123743-123762 | Msa1375240:intron | 45.0% |
| AGTTAATGGAGCGATTCCCT+GGG | - | tig0019645:123862-123881 | None:intergenic | 45.0% | |
| ! | CATGCCATTGACTGCTTCAA+AGG | + | tig0019645:123923-123942 | Msa1375240:CDS | 45.0% |
| !! | CTGGATCGGACTAGTAAGAT+AGG | + | tig0019645:124021-124040 | Msa1375240:exon | 45.0% |
| CTCTTGTAGAATAACGCCTG+GGG | - | tig0019645:124062-124081 | None:intergenic | 45.0% | |
| GCTCTTGTAGAATAACGCCT+GGG | - | tig0019645:124063-124082 | None:intergenic | 45.0% | |
| AGCTCTTGTAGAATAACGCC+TGG | - | tig0019645:124064-124083 | None:intergenic | 45.0% | |
| AGAGCTAACACATCATGCTG+AGG | + | tig0019645:124078-124097 | Msa1375240:three_prime_UTR | 45.0% | |
| GAACATCTGGCCATGATGTA+TGG | + | tig0019645:124268-124287 | Msa1375240:three_prime_UTR | 45.0% | |
| TTTGTGATGGCAATGCGTGG+CGG | + | tig0019645:118606-118625 | Msa1375240:exon | 50.0% | |
| ! | GGAACATCGCGAAGGGTTTT+GGG | + | tig0019645:118627-118646 | Msa1375240:CDS | 50.0% |
| GAAGAAACAAGAGGAGGAGG+TGG | - | tig0019645:118687-118706 | None:intergenic | 50.0% | |
| CTTCGGGAAGAAACAAGAGG+AGG | - | tig0019645:118693-118712 | None:intergenic | 50.0% | |
| TCCCGAAGAGTAGTTGTCAC+CGG | + | tig0019645:118705-118724 | Msa1375240:CDS | 50.0% | |
| ACCGGTGACAACTACTCTTC+GGG | - | tig0019645:118709-118728 | None:intergenic | 50.0% | |
| ATGGTGACACCTCTTGGTTG+TGG | + | tig0019645:118816-118835 | Msa1375240:CDS | 50.0% | |
| !! | TCACCAGGGTTAGTTCCAGT+GGG | - | tig0019645:118987-119006 | None:intergenic | 50.0% |
| !! | TTCACCAGGGTTAGTTCCAG+TGG | - | tig0019645:118988-119007 | None:intergenic | 50.0% |
| GCTCTCTCAAGTAGTCTCCT+AGG | + | tig0019645:119408-119427 | Msa1375240:intron | 50.0% | |
| GTCACGGATCGATGTTCCTA+AGG | - | tig0019645:119761-119780 | None:intergenic | 50.0% | |
| AGGAACATCGATCCGTGACA+AGG | + | tig0019645:119762-119781 | Msa1375240:intron | 50.0% | |
| TCCTTGTGTTCCTGCTCAGT+GGG | - | tig0019645:119845-119864 | None:intergenic | 50.0% | |
| TTCCTTGTGTTCCTGCTCAG+TGG | - | tig0019645:119846-119865 | None:intergenic | 50.0% | |
| !! | AATCAGGGGGTGTCTATTGG+TGG | + | tig0019645:119949-119968 | Msa1375240:intron | 50.0% |
| !! | ATCAGGGGGTGTCTATTGGT+GGG | + | tig0019645:119950-119969 | Msa1375240:intron | 50.0% |
| ! | CTCCTTCCTACCTGTCACTT+CGG | + | tig0019645:120608-120627 | Msa1375240:intron | 50.0% |
| ATCCGAAGTGACAGGTAGGA+AGG | - | tig0019645:120613-120632 | None:intergenic | 50.0% | |
| GGCCCCTGTATTCAGGAATA+GGG | - | tig0019645:120853-120872 | None:intergenic | 50.0% | |
| TGGCCCCTGTATTCAGGAAT+AGG | - | tig0019645:120854-120873 | None:intergenic | 50.0% | |
| GCAGTGACTGCAGCATGATT+TGG | - | tig0019645:120874-120893 | None:intergenic | 50.0% | |
| ! | CAGTCACTGCTTGTGCTACT+GGG | + | tig0019645:120884-120903 | Msa1375240:CDS | 50.0% |
| GCAGATGTTATGGTGACTGG+AGG | + | tig0019645:120952-120971 | Msa1375240:CDS | 50.0% | |
| !! | CCCTTTGATAGTGGTCGAGA+TGG | + | tig0019645:121174-121193 | Msa1375240:CDS | 50.0% |
| CTCAGGATAGGTGAAGGTTC+TGG | + | tig0019645:121330-121349 | Msa1375240:intron | 50.0% | |
| !! | AGGTGAAGGTTCTGGAGTCT+TGG | + | tig0019645:121338-121357 | Msa1375240:CDS | 50.0% |
| !! | AGGTTCTGGAGTCTTGGTCT+TGG | + | tig0019645:121344-121363 | Msa1375240:CDS | 50.0% |
| !! | TTCTGGAGTCTTGGTCTTGG+AGG | + | tig0019645:121347-121366 | Msa1375240:CDS | 50.0% |
| ATTCGTGGCTATGGGATGTC+AGG | + | tig0019645:121516-121535 | Msa1375240:CDS | 50.0% | |
| ! | AACCCCAAAGGCTAGCTCAT+GGG | - | tig0019645:121812-121831 | None:intergenic | 50.0% |
| !! | ATTCAAGCATCGAGGTCTGG+CGG | + | tig0019645:121981-122000 | Msa1375240:intron | 50.0% |
| GTGATGTCAAGTCGTCAACC+AGG | - | tig0019645:122031-122050 | None:intergenic | 50.0% | |
| GACGACTTGACATCACCCAA+AGG | + | tig0019645:122035-122054 | Msa1375240:intron | 50.0% | |
| GGAAAAGACAAAGGGGGAGA+TGG | - | tig0019645:122083-122102 | None:intergenic | 50.0% | |
| !! | CTTTTGTGAAGAGTGGTGGG+TGG | - | tig0019645:122202-122221 | None:intergenic | 50.0% |
| AGCAGTTGTAGTGGCAGTAG+TGG | + | tig0019645:122356-122375 | Msa1375240:intron | 50.0% | |
| ATTTGAGTGAGCTGGCGCAT+TGG | - | tig0019645:122420-122439 | None:intergenic | 50.0% | |
| ! | CTAAGGGTGTGTTTGGATGG+AGG | + | tig0019645:122810-122829 | Msa1375240:CDS | 50.0% |
| ATGGAGGGTTTAGAAGGGGA+AGG | + | tig0019645:122826-122845 | Msa1375240:intron | 50.0% | |
| TGGAGGGTTTAGAAGGGGAA+GGG | + | tig0019645:122827-122846 | Msa1375240:intron | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | - | tig0019645:123021-123040 | None:intergenic | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | - | tig0019645:123022-123041 | None:intergenic | 50.0% | |
| GTGAAGCAGATCCATCCTCA+CGG | + | tig0019645:123242-123261 | Msa1375240:intron | 50.0% | |
| ATTGCTGGAATCCGTGAGGA+TGG | - | tig0019645:123256-123275 | None:intergenic | 50.0% | |
| CTCATCCACCAAGGTAAGAG+TGG | + | tig0019645:123437-123456 | Msa1375240:intron | 50.0% | |
| TGCAACCACTCTTACCTTGG+TGG | - | tig0019645:123445-123464 | None:intergenic | 50.0% | |
| GCTTGCAACCACTCTTACCT+TGG | - | tig0019645:123448-123467 | None:intergenic | 50.0% | |
| !! | CACTGATTTCAGGGGGCTAT+TGG | + | tig0019645:123644-123663 | Msa1375240:intron | 50.0% |
| ! | CATTTTGTGTGCGAGTCACG+GGG | + | tig0019645:123744-123763 | Msa1375240:intron | 50.0% |
| GAGTTAATGGAGCGATTCCC+TGG | - | tig0019645:123863-123882 | None:intergenic | 50.0% | |
| GTGCATCTCATTCATTCCCC+AGG | + | tig0019645:124043-124062 | Msa1375240:three_prime_UTR | 50.0% | |
| ! | CGGAACATCGCGAAGGGTTT+TGG | + | tig0019645:118626-118645 | Msa1375240:CDS | 55.0% |
| CGGGAAGAAACAAGAGGAGG+AGG | - | tig0019645:118690-118709 | None:intergenic | 55.0% | |
| TTGGGCATGGTGACACCTCT+TGG | + | tig0019645:118810-118829 | Msa1375240:CDS | 55.0% | |
| GGGAACAAGCGCAGCAACTT+TGG | - | tig0019645:118967-118986 | None:intergenic | 55.0% | |
| GTTCCCACTGGAACTAACCC+TGG | + | tig0019645:118981-119000 | Msa1375240:CDS | 55.0% | |
| GCAATGGCAGCTTTGCACCA+TGG | - | tig0019645:119486-119505 | None:intergenic | 55.0% | |
| TCCCACTGAGCAGGAACACA+AGG | + | tig0019645:119841-119860 | Msa1375240:CDS | 55.0% | |
| !! | TCAGGGGGTGTCTATTGGTG+GGG | + | tig0019645:119951-119970 | Msa1375240:intron | 55.0% |
| GTGTCTATTGGTGGGGGAAC+TGG | + | tig0019645:119958-119977 | Msa1375240:CDS | 55.0% | |
| CGCTGCATACAGGGGAGAAT+AGG | - | tig0019645:120169-120188 | None:intergenic | 55.0% | |
| GACGAAGACGCTGCATACAG+GGG | - | tig0019645:120177-120196 | None:intergenic | 55.0% | |
| CGACGAAGACGCTGCATACA+GGG | - | tig0019645:120178-120197 | None:intergenic | 55.0% | |
| AGCTCCTGTAGTTGCTGGAC+AGG | + | tig0019645:120330-120349 | Msa1375240:intron | 55.0% | |
| GTTGCCTGTCCAGCAACTAC+AGG | - | tig0019645:120337-120356 | None:intergenic | 55.0% | |
| GCAGTCACTGCTTGTGCTAC+TGG | + | tig0019645:120883-120902 | Msa1375240:CDS | 55.0% | |
| !! | CAAGCCCACAAGAAGCATCG+CGG | + | tig0019645:121151-121170 | Msa1375240:CDS | 55.0% |
| ! | CAACCTCCTAGTGATGGGAG+AGG | + | tig0019645:121643-121662 | Msa1375240:CDS | 55.0% |
| ATGGCACCTCTCCCATCACT+AGG | - | tig0019645:121652-121671 | None:intergenic | 55.0% | |
| !! | TGATGGGAGAGGTGCCATTC+TGG | + | tig0019645:121654-121673 | Msa1375240:CDS | 55.0% |
| AGCACGAGTCATGGCCAGAA+TGG | - | tig0019645:121671-121690 | None:intergenic | 55.0% | |
| ! | AAGGCTAGCTCATGGGGTGA+GGG | - | tig0019645:121805-121824 | None:intergenic | 55.0% |
| ! | AAAGGCTAGCTCATGGGGTG+AGG | - | tig0019645:121806-121825 | None:intergenic | 55.0% |
| !! | TCACCCCATGAGCTAGCCTT+TGG | + | tig0019645:121805-121824 | Msa1375240:intron | 55.0% |
| !! | CACCCCATGAGCTAGCCTTT+GGG | + | tig0019645:121806-121825 | Msa1375240:intron | 55.0% |
| !! | ACCCCATGAGCTAGCCTTTG+GGG | + | tig0019645:121807-121826 | Msa1375240:intron | 55.0% |
| ! | ACCCCAAAGGCTAGCTCATG+GGG | - | tig0019645:121811-121830 | None:intergenic | 55.0% |
| ! | CAACCCCAAAGGCTAGCTCA+TGG | - | tig0019645:121813-121832 | None:intergenic | 55.0% |
| AGGGCAAGAGCTAAGGCTTG+AGG | - | tig0019645:121870-121889 | None:intergenic | 55.0% | |
| TTGGGAGAGGGCAAGAGCTA+AGG | - | tig0019645:121877-121896 | None:intergenic | 55.0% | |
| !! | AGGTCTGGCGGTTTTGGCAA+TGG | + | tig0019645:121993-122012 | Msa1375240:intron | 55.0% |
| CAATGGAAGCTTGTCCACCC+TGG | + | tig0019645:122010-122029 | Msa1375240:intron | 55.0% | |
| TGTCAAGTCGTCAACCAGGG+TGG | - | tig0019645:122027-122046 | None:intergenic | 55.0% | |
| GAGCTGGCGCATTGGACATA+GGG | - | tig0019645:122412-122431 | None:intergenic | 55.0% | |
| TGAGCTGGCGCATTGGACAT+AGG | - | tig0019645:122413-122432 | None:intergenic | 55.0% | |
| AGGGTTTAGAAGGGGAAGGG+AGG | + | tig0019645:122830-122849 | Msa1375240:intron | 55.0% | |
| GGGTTTAGAAGGGGAAGGGA+GGG | + | tig0019645:122831-122850 | Msa1375240:intron | 55.0% | |
| GGTTTAGAAGGGGAAGGGAG+GGG | + | tig0019645:122832-122851 | Msa1375240:intron | 55.0% | |
| GGGGCTATTGGTCATCTCCT+TGG | + | tig0019645:123656-123675 | Msa1375240:CDS | 55.0% | |
| !! | TGGGGTAAGGGCACTGCGTT+TGG | + | tig0019645:118878-118897 | Msa1375240:CDS | 60.0% |
| !! | GGTAAGGGCACTGCGTTTGG+AGG | + | tig0019645:118881-118900 | Msa1375240:CDS | 60.0% |
| GTTGCTGCGCTTGTTCCCAC+TGG | + | tig0019645:118969-118988 | Msa1375240:CDS | 60.0% | |
| !! | CAGGGGGTGTCTATTGGTGG+GGG | + | tig0019645:119952-119971 | Msa1375240:intron | 60.0% |
| GCGACGAAGACGCTGCATAC+AGG | - | tig0019645:120179-120198 | None:intergenic | 60.0% | |
| AGGGCCGCGATGCTTCTTGT+GGG | - | tig0019645:121158-121177 | None:intergenic | 60.0% | |
| AAGGGCCGCGATGCTTCTTG+TGG | - | tig0019645:121159-121178 | None:intergenic | 60.0% | |
| GCATCGCGGCCCTTTGATAG+TGG | + | tig0019645:121165-121184 | Msa1375240:CDS | 60.0% | |
| GCACCTCTCCCATCACTAGG+AGG | - | tig0019645:121649-121668 | None:intergenic | 60.0% | |
| ! | GCATCGAGGTCTGGCGGTTT+TGG | + | tig0019645:121987-122006 | Msa1375240:intron | 60.0% |
| TTAGAAGGGGAAGGGAGGGG+AGG | + | tig0019645:122835-122854 | Msa1375240:intron | 60.0% | |
| TAGAAGGGGAAGGGAGGGGA+GGG | + | tig0019645:122836-122855 | Msa1375240:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | tig0019645:123016-123035 | None:intergenic | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | tig0019645:123017-123036 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | tig0019645:123018-123037 | None:intergenic | 60.0% | |
| !! | GGTCATCTCCTTGGTGCTGC+TGG | + | tig0019645:123665-123684 | Msa1375240:CDS | 60.0% |
| CAACAGCTCCAGCAGCACCA+AGG | - | tig0019645:123676-123695 | None:intergenic | 60.0% | |
| ! | TGCGTGGCGGAACATCGCGA+AGG | + | tig0019645:118619-118638 | Msa1375240:CDS | 65.0% |
| ! | GCGTGGCGGAACATCGCGAA+GGG | + | tig0019645:118620-118639 | Msa1375240:CDS | 65.0% |
| TTAGGAGGGGAAGGGAGGGG+AGG | - | tig0019645:123013-123032 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019645 | gene | 118575 | 124612 | 118575 | ID=Msa1375240;Name=Msa1375240 |
| tig0019645 | mRNA | 118575 | 124612 | 118575 | ID=Msa1375240-mRNA-1;Parent=Msa1375240;Name=Msa1375240-mRNA-1;_AED=0.14;_eAED=0.14;_QI=37|0.85|0.93|0.93|1|1|15|578|486 |
| tig0019645 | exon | 118575 | 118726 | 118575 | ID=Msa1375240-mRNA-1:exon:4347;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 118808 | 119037 | 118808 | ID=Msa1375240-mRNA-1:exon:4348;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 119764 | 119871 | 119764 | ID=Msa1375240-mRNA-1:exon:4349;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 119955 | 120026 | 119955 | ID=Msa1375240-mRNA-1:exon:4350;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 120187 | 120273 | 120187 | ID=Msa1375240-mRNA-1:exon:4351;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 120868 | 121019 | 120868 | ID=Msa1375240-mRNA-1:exon:4352;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 121122 | 121202 | 121122 | ID=Msa1375240-mRNA-1:exon:4353;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 121335 | 121368 | 121335 | ID=Msa1375240-mRNA-1:exon:4354;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 121471 | 121537 | 121471 | ID=Msa1375240-mRNA-1:exon:4355;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 121623 | 121699 | 121623 | ID=Msa1375240-mRNA-1:exon:4356;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 122782 | 122832 | 122782 | ID=Msa1375240-mRNA-1:exon:4357;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 123177 | 123237 | 123177 | ID=Msa1375240-mRNA-1:exon:4358;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 123367 | 123449 | 123367 | ID=Msa1375240-mRNA-1:exon:4359;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 123656 | 123727 | 123656 | ID=Msa1375240-mRNA-1:exon:4360;Parent=Msa1375240-mRNA-1 |
| tig0019645 | exon | 123864 | 124612 | 123864 | ID=Msa1375240-mRNA-1:exon:4361;Parent=Msa1375240-mRNA-1 |
| tig0019645 | five_prime_UTR | 118575 | 118611 | 118575 | ID=Msa1375240-mRNA-1:five_prime_utr;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 118612 | 118726 | 118612 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 118808 | 119037 | 118808 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 119764 | 119871 | 119764 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 119955 | 120026 | 119955 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 120187 | 120273 | 120187 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 120868 | 121019 | 120868 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 121122 | 121202 | 121122 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 121335 | 121368 | 121335 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 121471 | 121537 | 121471 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 121623 | 121699 | 121623 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 122782 | 122832 | 122782 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 123177 | 123237 | 123177 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 123367 | 123449 | 123367 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 123656 | 123727 | 123656 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | CDS | 123864 | 124034 | 123864 | ID=Msa1375240-mRNA-1:cds;Parent=Msa1375240-mRNA-1 |
| tig0019645 | three_prime_UTR | 124035 | 124612 | 124035 | ID=Msa1375240-mRNA-1:three_prime_utr;Parent=Msa1375240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
