Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074970 | XP_013468411.1 | 90.447 | 492 | 23 | 4 | 1 | 487 | 1 | 473 | 0.0 | 852 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074970 | sp|Q8L3X9|KASM_ARATH | 73.009 | 452 | 101 | 3 | 31 | 482 | 29 | 459 | 0.0 | 664 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074970 | A0A072VM15 | 90.447 | 492 | 23 | 4 | 1 | 487 | 1 | 473 | 0.0 | 852 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032120 | Msa0074970 | 0.827027 | 1.962661e-54 | -8.615850e-47 |
| Msa0073820 | Msa0074970 | 0.803567 | 3.278530e-49 | -8.615850e-47 |
| Msa0074970 | Msa0167660 | 0.807911 | 4.011371e-50 | -8.615850e-47 |
| Msa0074970 | Msa0183610 | 0.808588 | 2.876486e-50 | -8.615850e-47 |
| Msa0074970 | Msa0185700 | 0.807178 | 5.739451e-50 | -8.615850e-47 |
| Msa0074970 | Msa0207000 | 0.805262 | 1.453277e-49 | -8.615850e-47 |
| Msa0074970 | Msa0527600 | 0.809740 | 1.629925e-50 | -8.615850e-47 |
| Msa0074970 | Msa0576420 | 0.803240 | 3.830608e-49 | -8.615850e-47 |
| Msa0074970 | Msa0621120 | 0.800932 | 1.142985e-48 | -8.615850e-47 |
| Msa0074970 | Msa1111630 | 0.804487 | 2.109689e-49 | -8.615850e-47 |
| Msa0074970 | Msa1125780 | 0.809849 | 1.543876e-50 | -8.615850e-47 |
| Msa0074970 | Msa1125950 | 0.811324 | 7.411277e-51 | -8.615850e-47 |
| Msa0074970 | Msa1171340 | 0.808057 | 3.734160e-50 | -8.615850e-47 |
| Msa0074970 | Msa1177240 | 0.806047 | 9.945546e-50 | -8.615850e-47 |
| Msa0074970 | Msa1188940 | 0.825667 | 4.137513e-54 | -8.615850e-47 |
| Msa0074970 | Msa1284520 | 0.811244 | 7.714882e-51 | -8.615850e-47 |
| Msa0074970 | Msa1317030 | 0.819852 | 9.340375e-53 | -8.615850e-47 |
| Msa0074970 | Msa1354040 | 0.807369 | 5.227929e-50 | -8.615850e-47 |
| Msa0074970 | Msa1375240 | 0.809920 | 1.490827e-50 | -8.615850e-47 |
| Msa0074970 | Msa1398480 | 0.835711 | 1.430971e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074970 | MtrunA17_Chr1g0183091 | 90.447 | 492 | 23 | 4 | 1 | 487 | 1 | 473 | 0.0 | 852 |
| Msa0074970 | MtrunA17_Chr2g0301361 | 38.462 | 481 | 251 | 8 | 4 | 482 | 48 | 485 | 5.62e-87 | 275 |
| Msa0074970 | MtrunA17_Chr4g0070171 | 40.789 | 456 | 217 | 11 | 33 | 482 | 80 | 488 | 5.63e-86 | 273 |
| Msa0074970 | MtrunA17_Chr1g0204841 | 37.307 | 453 | 237 | 9 | 33 | 482 | 60 | 468 | 2.60e-85 | 270 |
| Msa0074970 | MtrunA17_Chr8g0388511 | 36.919 | 409 | 214 | 7 | 33 | 439 | 17 | 383 | 1.33e-77 | 248 |
| Msa0074970 | MtrunA17_Chr4g0052121 | 33.554 | 453 | 250 | 10 | 33 | 482 | 58 | 462 | 3.38e-56 | 194 |
| Msa0074970 | MtrunA17_Chr8g0388561 | 43.017 | 179 | 89 | 5 | 304 | 482 | 1 | 166 | 7.06e-35 | 128 |
| Msa0074970 | MtrunA17_Chr8g0388551 | 26.894 | 264 | 110 | 6 | 33 | 296 | 37 | 217 | 2.16e-23 | 100 |
| Msa0074970 | MtrunA17_Chr8g0388531 | 28.037 | 214 | 118 | 5 | 33 | 243 | 45 | 225 | 2.60e-18 | 84.0 |
| Msa0074970 | MtrunA17_Chr8g0388541 | 50.000 | 74 | 36 | 1 | 248 | 321 | 1 | 73 | 6.64e-14 | 68.6 |
| Msa0074970 | MtrunA17_Chr8g0388541 | 46.835 | 79 | 33 | 2 | 361 | 439 | 55 | 124 | 6.15e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074970 | AT2G04540.1 | 73.009 | 452 | 101 | 3 | 31 | 482 | 29 | 459 | 0.0 | 664 |
| Msa0074970 | AT5G46290.1 | 37.307 | 453 | 237 | 9 | 33 | 482 | 61 | 469 | 9.20e-86 | 272 |
| Msa0074970 | AT5G46290.3 | 36.247 | 469 | 236 | 10 | 33 | 482 | 61 | 485 | 7.81e-83 | 265 |
| Msa0074970 | AT1G74960.1 | 38.362 | 464 | 241 | 8 | 21 | 482 | 118 | 538 | 1.55e-81 | 263 |
| Msa0074970 | AT1G74960.3 | 38.362 | 464 | 241 | 8 | 21 | 482 | 118 | 538 | 1.55e-81 | 263 |
| Msa0074970 | AT1G74960.2 | 38.362 | 464 | 241 | 8 | 21 | 482 | 118 | 538 | 1.55e-81 | 263 |
| Msa0074970 | AT5G46290.2 | 45.175 | 228 | 114 | 4 | 255 | 482 | 198 | 414 | 3.49e-52 | 182 |
Find 143 sgRNAs with CRISPR-Local
Find 452 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGATATGCTTCGGTAAA+TGG | 0.144969 | 1_2:+50038667 | None:intergenic |
| ACAAGGCCAGATTCTGTATT+TGG | 0.163247 | 1_2:-50033387 | Msa0074970:CDS |
| CACATTTGCCATCAATTAAT+TGG | 0.199184 | 1_2:+50038458 | None:intergenic |
| ATAAATATTTGGCTAAAATA+TGG | 0.209465 | 1_2:-50032904 | Msa0074970:three_prime_UTR |
| ACGAATCTCTGCATAGATTT+TGG | 0.215851 | 1_2:+50035798 | None:intergenic |
| TCTGAAATGAAATAAATATT+TGG | 0.243689 | 1_2:-50032915 | Msa0074970:three_prime_UTR |
| GCAATGAGAATGATTCAATT+TGG | 0.244331 | 1_2:-50036374 | Msa0074970:CDS |
| GCAGTCACTGCTTGTGCTAC+TGG | 0.246599 | 1_2:-50036416 | Msa0074970:CDS |
| GATCTATTAAAACGTCTTAC+AGG | 0.263339 | 1_2:+50032786 | None:intergenic |
| AAGCTCTTAAAGATTCTAAT+TGG | 0.273978 | 1_2:-50037480 | Msa0074970:CDS |
| CAATGAGAATGATTCAATTT+GGG | 0.278917 | 1_2:-50036373 | Msa0074970:CDS |
| TTTGACATAGCTACTCTAAT+TGG | 0.296884 | 1_2:+50033327 | None:intergenic |
| GTAGCTATGTCAAACTCTTT+TGG | 0.297068 | 1_2:-50033318 | Msa0074970:CDS |
| ATTGATGCATTATCAATTGC+AGG | 0.313043 | 1_2:-50036311 | Msa0074970:CDS |
| GGCCACGTTAGCATGAAATA+TGG | 0.325924 | 1_2:-50037052 | Msa0074970:CDS |
| TGGGGTAAGGGCACTGCGTT+TGG | 0.333218 | 1_2:-50038437 | Msa0074970:CDS |
| CTTGTTAAATTAAGAGTTAA+TGG | 0.337796 | 1_2:+50033405 | None:intergenic |
| GGTCATCTCCTTGGTGCTGC+TGG | 0.343211 | 1_2:-50033613 | Msa0074970:CDS |
| CGGAACATCGCGAAGGGTAT+TGG | 0.345869 | 1_2:-50038693 | Msa0074970:CDS |
| GCTAGCATGGTCAGAGAATA+TGG | 0.347485 | 1_2:+50033881 | None:intergenic |
| TGATGGGAGAGGTGCCATTC+TGG | 0.350310 | 1_2:-50035643 | Msa0074970:CDS |
| TCATGCTGAGGAGAATTTAA+TGG | 0.353784 | 1_2:-50033188 | Msa0074970:three_prime_UTR |
| CCTGCAAATATGCCTCGTTT+TGG | 0.369180 | 1_2:-50032873 | Msa0074970:three_prime_UTR |
| TAAGGAAAAGCTCGTACTTC+AGG | 0.371137 | 1_2:+50033133 | None:intergenic |
| CTCAGGATAGGTGAAGGTTC+TGG | 0.377739 | 1_2:-50035969 | Msa0074970:intron |
| TTCTAAATAGGTCAGGAATA+AGG | 0.381927 | 1_2:-50032982 | Msa0074970:three_prime_UTR |
| AATTGCATTGTGAGAACATC+TGG | 0.384297 | 1_2:-50033023 | Msa0074970:three_prime_UTR |
| TTGTCACCAAATACAGAATC+TGG | 0.389800 | 1_2:+50033381 | None:intergenic |
| AAATCACAATCATTGATATC+AGG | 0.390924 | 1_2:+50032693 | None:intergenic |
| TGTATGGTGCAATTCTAAAT+AGG | 0.394006 | 1_2:-50032994 | Msa0074970:three_prime_UTR |
| GTGTTATTATAAGTTTCTTT+TGG | 0.394799 | 1_2:-50037663 | Msa0074970:intron |
| GCAGTGACTGCAGCATGATT+TGG | 0.395312 | 1_2:+50036428 | None:intergenic |
| AGGAACAAGCGCAGCAACTT+TGG | 0.400834 | 1_2:+50038351 | None:intergenic |
| GGAACATCGCGAAGGGTATT+GGG | 0.401015 | 1_2:-50038692 | Msa0074970:CDS |
| CCAAAACGAGGCATATTTGC+AGG | 0.403848 | 1_2:+50032873 | None:intergenic |
| ACCGGTGACAACTACTCTTC+GGG | 0.405117 | 1_2:+50038613 | None:intergenic |
| GTTGCTGCGCTTGTTCCTAC+TGG | 0.406230 | 1_2:-50038346 | Msa0074970:CDS |
| CATGACTCGTGCTTTAAAAC+AGG | 0.411211 | 1_2:-50035619 | Msa0074970:intron |
| CTCACCAGAATTCTTTATAC+AGG | 0.411444 | 1_2:-50033933 | Msa0074970:intron |
| GCAATTGGAATAATCATAAG+AGG | 0.415709 | 1_2:+50033040 | None:intergenic |
| GCTACTGGGTCACATTCTAT+TGG | 0.420147 | 1_2:-50036401 | Msa0074970:CDS |
| TAGCATGAAATATGGGTTCC+AGG | 0.420812 | 1_2:-50037044 | Msa0074970:intron |
| CATGCCATTGACTGCTTCAA+AGG | 0.421259 | 1_2:-50033355 | Msa0074970:CDS |
| ATTTGGGGATGCAGATGTTA+TGG | 0.426257 | 1_2:-50036357 | Msa0074970:CDS |
| AGATGTTCTCACAATGCAAT+TGG | 0.428181 | 1_2:+50033025 | None:intergenic |
| TATGCAGAGATTCGTGGCTA+TGG | 0.430190 | 1_2:-50035790 | Msa0074970:CDS |
| CAGTCACTGCTTGTGCTACT+GGG | 0.430249 | 1_2:-50036415 | Msa0074970:CDS |
| TCCTTGTGTTCCTGCTCAGT+GGG | 0.431783 | 1_2:+50037454 | None:intergenic |
| GGGGCTATTGGTCATCTCCT+TGG | 0.431894 | 1_2:-50033622 | Msa0074970:CDS |
| AACCGGTGACAACTACTCTT+CGG | 0.433030 | 1_2:+50038612 | None:intergenic |
| AGGTTCTGGAATCTTGGTCT+TGG | 0.436115 | 1_2:-50035955 | Msa0074970:CDS |
| ACATGGAACCAATTAATTGA+TGG | 0.440374 | 1_2:-50038466 | Msa0074970:CDS |
| TCTCGGTCATTGATCTAAAT+CGG | 0.441313 | 1_2:+50032755 | None:intergenic |
| AATTGATAATGCATCAATAC+TGG | 0.442107 | 1_2:+50036316 | None:intergenic |
| TTCTGGAATCTTGGTCTTGG+AGG | 0.443282 | 1_2:-50035952 | Msa0074970:intron |
| CAATTAATTGATGGCAAATG+TGG | 0.453754 | 1_2:-50038457 | Msa0074970:CDS |
| CTGGATCGGACTAGTAAGAT+AGG | 0.457864 | 1_2:-50033257 | Msa0074970:exon |
| AAGCTTTATCTGATATGCTT+CGG | 0.465093 | 1_2:+50038660 | None:intergenic |
| TTGGGCATGGTGACACCTCT+TGG | 0.467880 | 1_2:-50038505 | Msa0074970:CDS |
| CATTAACTCTTAATTTAACA+AGG | 0.477564 | 1_2:-50033404 | Msa0074970:CDS |
| TTGATGGCAAATGTGGGGTA+AGG | 0.480226 | 1_2:-50038450 | Msa0074970:CDS |
| CACAAACAAACTACACTCAC+TGG | 0.480930 | 1_2:+50038730 | None:intergenic |
| CATGCTACATCTACACCTTT+AGG | 0.481993 | 1_2:-50034062 | Msa0074970:CDS |
| AGGTGAAGGTTCTGGAATCT+TGG | 0.482541 | 1_2:-50035961 | Msa0074970:CDS |
| AAGGGCCGCGATGCTTCTTG+TGG | 0.483481 | 1_2:+50036143 | None:intergenic |
| TAATTGGTTTCCCACTGAGC+AGG | 0.484051 | 1_2:-50037464 | Msa0074970:CDS |
| ATTCGTGGCTATGGGATGTC+AGG | 0.488176 | 1_2:-50035781 | Msa0074970:intron |
| GCATCGCGGCCCTTTGATAG+TGG | 0.490347 | 1_2:-50036134 | Msa0074970:CDS |
| GGTAAGGGCACTGCGTTTGG+AGG | 0.494902 | 1_2:-50038434 | Msa0074970:CDS |
| TTAACACAGTTAAATGATCT+CGG | 0.502767 | 1_2:+50032738 | None:intergenic |
| AGGGCCGCGATGCTTCTTGT+GGG | 0.506418 | 1_2:+50036144 | None:intergenic |
| CCCTTTGATAGTGGTCGAGA+TGG | 0.506777 | 1_2:-50036125 | Msa0074970:CDS |
| ATATTGATAAACATGGCATC+AGG | 0.513692 | 1_2:-50037073 | Msa0074970:CDS |
| GCCACGTTAGCATGAAATAT+GGG | 0.514383 | 1_2:-50037051 | Msa0074970:CDS |
| AAAATCTATGCAGAGATTCG+TGG | 0.515530 | 1_2:-50035796 | Msa0074970:CDS |
| GGTGCAATTCTAAATAGGTC+AGG | 0.516355 | 1_2:-50032989 | Msa0074970:three_prime_UTR |
| TGCAACCACTCTTACCTTGG+TGG | 0.516765 | 1_2:+50033836 | None:intergenic |
| GATGCAGATGTTATGGTGAC+TGG | 0.517325 | 1_2:-50036350 | Msa0074970:CDS |
| TGCTCAACTGATATGTGAAA+AGG | 0.518775 | 1_2:-50037291 | Msa0074970:intron |
| AGAATCTTTAAGAGCTTCAT+CGG | 0.520139 | 1_2:+50037486 | None:intergenic |
| ATGCAGAGATTCGTGGCTAT+GGG | 0.522380 | 1_2:-50035789 | Msa0074970:CDS |
| ATCTCCTTTGAAGCAGTCAA+TGG | 0.522727 | 1_2:+50033351 | None:intergenic |
| TTCCTTGTGTTCCTGCTCAG+TGG | 0.523925 | 1_2:+50037453 | None:intergenic |
| AAGTATAAAGAAAACAAAGT+TGG | 0.524925 | 1_2:-50037690 | Msa0074970:CDS |
| TAGAATTGCACCATACATCA+TGG | 0.531373 | 1_2:+50033000 | None:intergenic |
| TCCCGAAGAGTAGTTGTCAC+CGG | 0.532836 | 1_2:-50038614 | Msa0074970:intron |
| TCCATCTCGACCACTATCAA+AGG | 0.533832 | 1_2:+50036124 | None:intergenic |
| AGCTCTTGTAGAATAACGCC+TGG | 0.534029 | 1_2:+50033217 | None:intergenic |
| GATCTGCTTCACTTGCCTAA+AGG | 0.535384 | 1_2:+50034047 | None:intergenic |
| TCTTACCTTGGTGGATGAGA+AGG | 0.535724 | 1_2:+50033845 | None:intergenic |
| ATCTATTAAAACGTCTTACA+GGG | 0.538372 | 1_2:+50032787 | None:intergenic |
| GAACATCTGGCCATGATGTA+TGG | 0.539570 | 1_2:-50033010 | Msa0074970:three_prime_UTR |
| AATTAATTGATGGCAAATGT+GGG | 0.542292 | 1_2:-50038456 | Msa0074970:CDS |
| ATCATTGATATCAGGTTAGA+CGG | 0.542428 | 1_2:+50032701 | None:intergenic |
| TGAGTGTAGTTTGTTTGTGA+TGG | 0.548019 | 1_2:-50038726 | Msa0074970:exon |
| GAAGAAACAAGAGGAGGAGG+TGG | 0.549891 | 1_2:+50038635 | None:intergenic |
| AGCACGAGTCATGGCCAGAA+TGG | 0.551728 | 1_2:+50035629 | None:intergenic |
| TGATGGCAAATGTGGGGTAA+GGG | 0.556335 | 1_2:-50038449 | Msa0074970:CDS |
| GTGCATCTCATTCATTCCCC+AGG | 0.556702 | 1_2:-50033235 | Msa0074970:three_prime_UTR |
| ATTACTCAACCTCCTAGTGA+TGG | 0.557704 | 1_2:-50035660 | Msa0074970:CDS |
| GGAAGTCAATTGATCAAATG+TGG | 0.558097 | 1_2:+50038372 | None:intergenic |
| TTGATGTAATCTACATCAGA+AGG | 0.558485 | 1_2:+50034089 | None:intergenic |
| TAATGCATCAATACTGGACT+CGG | 0.561888 | 1_2:+50036322 | None:intergenic |
| CTAAAGAAGACGAGCTAGCA+TGG | 0.562258 | 1_2:+50033868 | None:intergenic |
| CGGGAAGAAACAAGAGGAGG+AGG | 0.573055 | 1_2:+50038632 | None:intergenic |
| CCATCTCGACCACTATCAAA+GGG | 0.575537 | 1_2:+50036125 | None:intergenic |
| GCTCTTGTAGAATAACGCCT+GGG | 0.580824 | 1_2:+50033218 | None:intergenic |
| TTACTCAACCTCCTAGTGAT+GGG | 0.586083 | 1_2:-50035659 | Msa0074970:CDS |
| TCCCACTGAGCAGGAACACA+AGG | 0.586433 | 1_2:-50037455 | Msa0074970:CDS |
| ATGGCACCTCTCCCATCACT+AGG | 0.594673 | 1_2:+50035648 | None:intergenic |
| GTTCCTACTGGAACTAACCC+TGG | 0.597954 | 1_2:-50038334 | Msa0074970:intron |
| ATGGTGACACCTCTTGGTTG+TGG | 0.599365 | 1_2:-50038499 | Msa0074970:CDS |
| CAACCTCCTAGTGATGGGAG+AGG | 0.613052 | 1_2:-50035654 | Msa0074970:CDS |
| AGGAACATCGATCCGTGACA+AGG | 0.617850 | 1_2:-50037534 | Msa0074970:CDS |
| ACCACGGATATTGATAAACA+TGG | 0.621168 | 1_2:-50037080 | Msa0074970:CDS |
| GGTCATTGATCTAAATCGGA+TGG | 0.625562 | 1_2:+50032759 | None:intergenic |
| TGCGTGGCGGAACATCGCGA+AGG | 0.631741 | 1_2:-50038700 | Msa0074970:CDS |
| AAATAGGTCAGGAATAAGGA+TGG | 0.632429 | 1_2:-50032978 | Msa0074970:three_prime_UTR |
| AATGAGAATGATTCAATTTG+GGG | 0.633075 | 1_2:-50036372 | Msa0074970:CDS |
| ACCCATATTTCATGCTAACG+TGG | 0.635539 | 1_2:+50037050 | None:intergenic |
| GTTGTGGAGTCCATAAAACA+TGG | 0.635817 | 1_2:-50038483 | Msa0074970:CDS |
| ATATGCTATAAACCTTGTCA+CGG | 0.641292 | 1_2:+50037522 | None:intergenic |
| TTTAGCCTTCTCATCCACCA+AGG | 0.647399 | 1_2:-50033850 | Msa0074970:intron |
| CAATTGGAATAATCATAAGA+GGG | 0.647677 | 1_2:+50033041 | None:intergenic |
| ATTGTACGTAGGTTTGGGCA+TGG | 0.647766 | 1_2:-50038518 | Msa0074970:intron |
| TTGTTTGTGATGGCAATGCG+TGG | 0.649163 | 1_2:-50038716 | Msa0074970:exon |
| GCGTGGCGGAACATCGCGAA+GGG | 0.649415 | 1_2:-50038699 | Msa0074970:CDS |
| GCACCTCTCCCATCACTAGG+AGG | 0.650311 | 1_2:+50035651 | None:intergenic |
| GCCATGTTTATCAATATCCG+TGG | 0.652979 | 1_2:+50037079 | None:intergenic |
| CAAAACGAGGCATATTTGCA+GGG | 0.654615 | 1_2:+50032874 | None:intergenic |
| GCAGGAACACAAGGAAAGAA+CGG | 0.661590 | 1_2:-50037446 | Msa0074970:intron |
| ATTAATTGATGGCAAATGTG+GGG | 0.665821 | 1_2:-50038455 | Msa0074970:CDS |
| CAACAGCTCCAGCAGCACCA+AGG | 0.665891 | 1_2:+50033605 | None:intergenic |
| ACTCTTCGGGAAGAAACAAG+AGG | 0.666135 | 1_2:+50038626 | None:intergenic |
| TCACCAGGGTTAGTTCCAGT+AGG | 0.676868 | 1_2:+50038331 | None:intergenic |
| CTCTTGTAGAATAACGCCTG+GGG | 0.685659 | 1_2:+50033219 | None:intergenic |
| TTATGGACTCCACAACCAAG+AGG | 0.690325 | 1_2:+50038490 | None:intergenic |
| TTTGTGATGGCAATGCGTGG+CGG | 0.692252 | 1_2:-50038713 | Msa0074970:exon |
| AGAGCTAACACATCATGCTG+AGG | 0.698287 | 1_2:-50033200 | Msa0074970:three_prime_UTR |
| CAAGCCCACAAGAAGCATCG+CGG | 0.701523 | 1_2:-50036148 | Msa0074970:CDS |
| CTTCGGGAAGAAACAAGAGG+AGG | 0.712604 | 1_2:+50038629 | None:intergenic |
| CAGGGACTAAAACCAAAACG+AGG | 0.729871 | 1_2:+50032861 | None:intergenic |
| GCAGATGTTATGGTGACTGG+AGG | 0.730564 | 1_2:-50036347 | Msa0074970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATTCTATTTAAATTAAA+AGG | - | chr1_2:50033662-50033681 | Msa0074970:intron | 10.0% |
| !!! | TTTTTCTCTTAAATTTTTAA+TGG | + | chr1_2:50037721-50037740 | None:intergenic | 10.0% |
| !!! | GACAGTTATTTTTTAAAAAA+TGG | - | chr1_2:50033363-50033382 | Msa0074970:CDS | 15.0% |
| !! | TTAAAAAATGGTTGTAATAT+AGG | - | chr1_2:50033375-50033394 | Msa0074970:CDS | 15.0% |
| !!! | TTTTAACTTCAAAATTAATC+AGG | - | chr1_2:50034068-50034087 | Msa0074970:CDS | 15.0% |
| !!! | TTTAACTTCAAAATTAATCA+GGG | - | chr1_2:50034069-50034088 | Msa0074970:CDS | 15.0% |
| !! | TTTAAATAAACTATTGCATT+TGG | - | chr1_2:50034272-50034291 | Msa0074970:intron | 15.0% |
| !!! | TTATAAGTTTTTAACTCAAA+TGG | - | chr1_2:50034828-50034847 | Msa0074970:intron | 15.0% |
| !! | AAAATTATATCTGAAAAACA+GGG | - | chr1_2:50034873-50034892 | Msa0074970:intron | 15.0% |
| !!! | TACTTTTCATTTTGAAATTA+CGG | - | chr1_2:50037014-50037033 | Msa0074970:intron | 15.0% |
| !!! | TACATTTCTTGTTTAAATTA+CGG | + | chr1_2:50037140-50037159 | None:intergenic | 15.0% |
| !! | ATTTAAGAGAAAAATTTGAA+TGG | - | chr1_2:50037727-50037746 | Msa0074970:intron | 15.0% |
| !! | TTTAAGAGAAAAATTTGAAT+GGG | - | chr1_2:50037728-50037747 | Msa0074970:intron | 15.0% |
| !!! | TCTGAAATGAAATAAATATT+TGG | - | chr1_2:50038516-50038535 | Msa0074970:intron | 15.0% |
| !! | ATAAATATTTGGCTAAAATA+TGG | - | chr1_2:50038527-50038546 | Msa0074970:intron | 15.0% |
| !!! | CAAAAACAATTTTTTTTACA+GGG | + | chr1_2:50038591-50038610 | None:intergenic | 15.0% |
| !!! | TAAAAAACAAAAAATTTTGC+AGG | + | chr1_2:50038617-50038636 | None:intergenic | 15.0% |
| !!! | ATTCAAACTGTTTTCATATA+AGG | - | chr1_2:50033286-50033305 | Msa0074970:CDS | 20.0% |
| !!! | ATATGAAGTATTTGACATAT+TGG | - | chr1_2:50033631-50033650 | Msa0074970:intron | 20.0% |
| !! | AAGTATAAAGAAAACAAAGT+TGG | - | chr1_2:50033741-50033760 | Msa0074970:intron | 20.0% |
| !!! | GTGTTATTATAAGTTTCTTT+TGG | - | chr1_2:50033768-50033787 | Msa0074970:intron | 20.0% |
| !! | TTAACTTCAAAATTAATCAG+GGG | - | chr1_2:50034070-50034089 | Msa0074970:CDS | 20.0% |
| !! | AGAAAAAAAAAACTTGAATG+AGG | + | chr1_2:50034212-50034231 | None:intergenic | 20.0% |
| !! | AAAAACTACTTTCGATTTAT+TGG | - | chr1_2:50034412-50034431 | Msa0074970:intron | 20.0% |
| !! | ATATCTACATAAGTTAGTAA+AGG | + | chr1_2:50034496-50034515 | None:intergenic | 20.0% |
| !!! | TAATTTTTTCTGATTGGATA+TGG | + | chr1_2:50034692-50034711 | None:intergenic | 20.0% |
| !! | GAAAATTATATCTGAAAAAC+AGG | - | chr1_2:50034872-50034891 | Msa0074970:intron | 20.0% |
| !! | ACAAAGACAAATAACTAATA+AGG | + | chr1_2:50035199-50035218 | None:intergenic | 20.0% |
| !! | TGATACTTAAAAACTGATAT+TGG | - | chr1_2:50035224-50035243 | Msa0074970:intron | 20.0% |
| !! | TGAACATTAAGCAAAATAAA+TGG | + | chr1_2:50035381-50035400 | None:intergenic | 20.0% |
| !! | GGAAATGAATAAACAAAAAA+AGG | + | chr1_2:50035574-50035593 | None:intergenic | 20.0% |
| !! | ACTTATTATGTATGAATAAG+TGG | - | chr1_2:50035906-50035925 | Msa0074970:intron | 20.0% |
| !! | CTTATTATGTATGAATAAGT+GGG | - | chr1_2:50035907-50035926 | Msa0074970:intron | 20.0% |
| !! | CCAACAAAAAAAAAAACTTT+GGG | + | chr1_2:50036029-50036048 | None:intergenic | 20.0% |
| !! | TCCAACAAAAAAAAAAACTT+TGG | + | chr1_2:50036030-50036049 | None:intergenic | 20.0% |
| !!! | TTTATAACTCTAAAACCTTT+GGG | + | chr1_2:50036187-50036206 | None:intergenic | 20.0% |
| !!! | TTTTATAACTCTAAAACCTT+TGG | + | chr1_2:50036188-50036207 | None:intergenic | 20.0% |
| !! | AGTGACAATTAAAGTTAAAA+AGG | + | chr1_2:50036687-50036706 | None:intergenic | 20.0% |
| !!! | TTTTTATATTCAAGTGCTTT+TGG | - | chr1_2:50036897-50036916 | Msa0074970:intron | 20.0% |
| !!! | TTTTGGCATATATTATTTCA+GGG | - | chr1_2:50036914-50036933 | Msa0074970:intron | 20.0% |
| !! | TTTGATATCATTAACACTTA+GGG | + | chr1_2:50037207-50037226 | None:intergenic | 20.0% |
| !! | AATATTCAAACTTAAATTGC+TGG | + | chr1_2:50037424-50037443 | None:intergenic | 20.0% |
| !! | TTAAGAGAAAAATTTGAATG+GGG | - | chr1_2:50037729-50037748 | Msa0074970:intron | 20.0% |
| !! | CTTGTTAAATTAAGAGTTAA+TGG | + | chr1_2:50038029-50038048 | None:intergenic | 20.0% |
| !! | CATTAACTCTTAATTTAACA+AGG | - | chr1_2:50038027-50038046 | Msa0074970:intron | 20.0% |
| !!! | CCAAAAACAATTTTTTTTAC+AGG | + | chr1_2:50038592-50038611 | None:intergenic | 20.0% |
| !!! | CCTGTAAAAAAAATTGTTTT+TGG | - | chr1_2:50038589-50038608 | Msa0074970:intron | 20.0% |
| ! | ATAAAAATCTCATGTATTCG+TGG | - | chr1_2:50032882-50032901 | Msa0074970:three_prime_UTR | 25.0% |
| !!! | TTAATTGGTTCCATGTTTTA+TGG | + | chr1_2:50032961-50032980 | None:intergenic | 25.0% |
| !! | AATTAATTGATGGCAAATGT+GGG | - | chr1_2:50032975-50032994 | Msa0074970:three_prime_UTR | 25.0% |
| ! | CAATAAGCATAATAGTTGTT+CGG | + | chr1_2:50033843-50033862 | None:intergenic | 25.0% |
| ! | AAGCTCTTAAAGATTCTAAT+TGG | - | chr1_2:50033951-50033970 | Msa0074970:intron | 25.0% |
| !! | ACGGTATGCAAATTTTTATA+TGG | - | chr1_2:50034004-50034023 | Msa0074970:intron | 25.0% |
| ! | TGAAGTTAAAATACAATGCA+AGG | + | chr1_2:50034059-50034078 | None:intergenic | 25.0% |
| ! | TAACTTCAAAATTAATCAGG+GGG | - | chr1_2:50034071-50034090 | Msa0074970:CDS | 25.0% |
| !!! | TTAGTCCATTTTTTATACCA+CGG | - | chr1_2:50034335-50034354 | Msa0074970:intron | 25.0% |
| ! | AATATCCGTGGTATAAAAAA+TGG | + | chr1_2:50034343-50034362 | None:intergenic | 25.0% |
| ! | TCTTTAGATATATAGAATGC+AGG | - | chr1_2:50034541-50034560 | Msa0074970:intron | 25.0% |
| !!! | TTTTAAAAGAGTAAGAAGCA+TGG | + | chr1_2:50034657-50034676 | None:intergenic | 25.0% |
| ! | CAATGAGAATGATTCAATTT+GGG | - | chr1_2:50035058-50035077 | Msa0074970:intron | 25.0% |
| ! | AATGAGAATGATTCAATTTG+GGG | - | chr1_2:50035059-50035078 | Msa0074970:intron | 25.0% |
| !!! | AATTGATAATGCATCAATAC+TGG | + | chr1_2:50035118-50035137 | None:intergenic | 25.0% |
| ! | AAGACAAATAACTAATAAGG+TGG | + | chr1_2:50035196-50035215 | None:intergenic | 25.0% |
| !!! | ATCAGTTTTTAAGTATCAGA+GGG | + | chr1_2:50035222-50035241 | None:intergenic | 25.0% |
| !!! | TATCAGTTTTTAAGTATCAG+AGG | + | chr1_2:50035223-50035242 | None:intergenic | 25.0% |
| !! | TGAGTTATATTTTGTACTCA+AGG | + | chr1_2:50035265-50035284 | None:intergenic | 25.0% |
| !!! | TTTGCTTAATGTTCACTTTT+TGG | - | chr1_2:50035386-50035405 | Msa0074970:intron | 25.0% |
| !!! | TCCAATTTATGTTTTTACTC+AGG | - | chr1_2:50035445-50035464 | Msa0074970:intron | 25.0% |
| ! | TCCTGAGTAAAAACATAAAT+TGG | + | chr1_2:50035449-50035468 | None:intergenic | 25.0% |
| !!! | TTTATGTTTTTACTCAGGAT+AGG | - | chr1_2:50035450-50035469 | Msa0074970:intron | 25.0% |
| !!! | GGTAAGTTAAATTTTTTGTG+TGG | - | chr1_2:50035500-50035519 | Msa0074970:intron | 25.0% |
| ! | TATTCATTTCCCTATTGTTT+AGG | - | chr1_2:50035583-50035602 | Msa0074970:intron | 25.0% |
| !!! | ATTTCATATGGATTTTGACT+AGG | - | chr1_2:50035735-50035754 | Msa0074970:intron | 25.0% |
| !!! | TTTCATATGGATTTTGACTA+GGG | - | chr1_2:50035736-50035755 | Msa0074970:intron | 25.0% |
| ! | TAACAAATACAAAGCAACAT+AGG | + | chr1_2:50035850-50035869 | None:intergenic | 25.0% |
| !! | AAAAAAAAAACTTTGGGAGA+GGG | + | chr1_2:50036023-50036042 | None:intergenic | 25.0% |
| !! | AAAAAAAAAAACTTTGGGAG+AGG | + | chr1_2:50036024-50036043 | None:intergenic | 25.0% |
| !!! | CCCAAAGTTTTTTTTTTTGT+TGG | - | chr1_2:50036026-50036045 | Msa0074970:intron | 25.0% |
| !!! | CCATTCTAGTTTTGTTATTA+GGG | - | chr1_2:50036436-50036455 | Msa0074970:intron | 25.0% |
| ! | GATAATAAGAGAAATAGAAC+AGG | + | chr1_2:50036611-50036630 | None:intergenic | 25.0% |
| !! | GTAATATGTTTGTTAGTTGA+CGG | + | chr1_2:50036660-50036679 | None:intergenic | 25.0% |
| ! | TGAATGAAATTATCATGTGA+AGG | - | chr1_2:50036872-50036891 | Msa0074970:intron | 25.0% |
| !! | CTTTTGGCATATATTATTTC+AGG | - | chr1_2:50036913-50036932 | Msa0074970:intron | 25.0% |
| ! | GTTTGATATCATTAACACTT+AGG | + | chr1_2:50037208-50037227 | None:intergenic | 25.0% |
| ! | GAAAACACAACAATACAATA+TGG | + | chr1_2:50037238-50037257 | None:intergenic | 25.0% |
| ! | AAATTATATGCTCATCTGTT+TGG | - | chr1_2:50037633-50037652 | Msa0074970:intron | 25.0% |
| ! | ATAGATTAAGCACAAATTCA+CGG | + | chr1_2:50037940-50037959 | None:intergenic | 25.0% |
| ! | ACTATTAGATTAAGCATACA+GGG | + | chr1_2:50037970-50037989 | None:intergenic | 25.0% |
| !! | ATATGCTACAAAAAGCTTTT+AGG | + | chr1_2:50038269-50038288 | None:intergenic | 25.0% |
| ! | CAATTGGAATAATCATAAGA+GGG | + | chr1_2:50038393-50038412 | None:intergenic | 25.0% |
| ! | ATCTATTAAAACGTCTTACA+GGG | + | chr1_2:50038647-50038666 | None:intergenic | 25.0% |
| ! | TTAACACAGTTAAATGATCT+CGG | + | chr1_2:50038696-50038715 | None:intergenic | 25.0% |
| ! | AAATCACAATCATTGATATC+AGG | + | chr1_2:50038741-50038760 | None:intergenic | 25.0% |
| ! | AAGCTTTATCTGATATGCTT+CGG | + | chr1_2:50032774-50032793 | None:intergenic | 30.0% |
| TGAATGCATAATTTGAGAGA+AGG | + | chr1_2:50032858-50032877 | None:intergenic | 30.0% | |
| ! | TTTTGAATTGTACGTAGGTT+TGG | - | chr1_2:50032907-50032926 | Msa0074970:three_prime_UTR | 30.0% |
| TTTGAATTGTACGTAGGTTT+GGG | - | chr1_2:50032908-50032927 | Msa0074970:three_prime_UTR | 30.0% | |
| ACATGGAACCAATTAATTGA+TGG | - | chr1_2:50032965-50032984 | Msa0074970:three_prime_UTR | 30.0% | |
| CACATTTGCCATCAATTAAT+TGG | + | chr1_2:50032976-50032995 | None:intergenic | 30.0% | |
| ! | CAATTAATTGATGGCAAATG+TGG | - | chr1_2:50032974-50032993 | Msa0074970:three_prime_UTR | 30.0% |
| ! | ATTAATTGATGGCAAATGTG+GGG | - | chr1_2:50032976-50032995 | Msa0074970:three_prime_UTR | 30.0% |
| GTGAATTCAACAACGAAATT+TGG | - | chr1_2:50033119-50033138 | Msa0074970:three_prime_UTR | 30.0% | |
| ! | CGAAATTTGGCTTAATTCTA+AGG | - | chr1_2:50033132-50033151 | Msa0074970:three_prime_UTR | 30.0% |
| CGATAAACGTCTTAATTAAG+TGG | - | chr1_2:50033218-50033237 | Msa0074970:three_prime_UTR | 30.0% | |
| ! | GTATAGAGAAAAGTGTAAAC+TGG | - | chr1_2:50033308-50033327 | Msa0074970:CDS | 30.0% |
| ATATAGGCTTACATGACAAT+AGG | - | chr1_2:50033391-50033410 | Msa0074970:CDS | 30.0% | |
| TATAGGCTTACATGACAATA+GGG | - | chr1_2:50033392-50033411 | Msa0074970:CDS | 30.0% | |
| ! | AATAAGCTAAAACCAGCTTT+TGG | - | chr1_2:50033479-50033498 | Msa0074970:intron | 30.0% |
| ! | TATTCTCCTCTAAGAACTTA+TGG | + | chr1_2:50033614-50033633 | None:intergenic | 30.0% |
| GATGTTATCTGTTATTGCTT+TGG | - | chr1_2:50033796-50033815 | Msa0074970:intron | 30.0% | |
| CGAACAACTATTATGCTTAT+TGG | - | chr1_2:50033841-50033860 | Msa0074970:intron | 30.0% | |
| GAAATGTCACAATACTACAA+TGG | + | chr1_2:50033873-50033892 | None:intergenic | 30.0% | |
| ATATGCTATAAACCTTGTCA+CGG | + | chr1_2:50033912-50033931 | None:intergenic | 30.0% | |
| ! | AGAATCTTTAAGAGCTTCAT+CGG | + | chr1_2:50033948-50033967 | None:intergenic | 30.0% |
| !! | GTGGTATAAAAAATGGACTA+AGG | + | chr1_2:50034336-50034355 | None:intergenic | 30.0% |
| ATATTGATAAACATGGCATC+AGG | - | chr1_2:50034358-50034377 | Msa0074970:intron | 30.0% | |
| !!! | ATCGAAAGTAGTTTTTTACC+TGG | + | chr1_2:50034408-50034427 | None:intergenic | 30.0% |
| TAAGTTAGTAAAGGACAATG+TGG | + | chr1_2:50034487-50034506 | None:intergenic | 30.0% | |
| TTCTAAATCAGTTTCACACA+AGG | + | chr1_2:50034617-50034636 | None:intergenic | 30.0% | |
| ATAATTATATCCGAAGTGAC+AGG | + | chr1_2:50034751-50034770 | None:intergenic | 30.0% | |
| !!! | TCAACCATGTTTTAAGAGAT+TGG | - | chr1_2:50034772-50034791 | Msa0074970:intron | 30.0% |
| CTAACCAATCTCTTAAAACA+TGG | + | chr1_2:50034779-50034798 | None:intergenic | 30.0% | |
| AATGGTTGCAATTTAGAGAT+TGG | - | chr1_2:50034846-50034865 | Msa0074970:intron | 30.0% | |
| ! | TGAAAAACAGGGTATTAAAC+TGG | - | chr1_2:50034884-50034903 | Msa0074970:intron | 30.0% |
| ! | TATTAAACTGGTTGTTGTTG+TGG | - | chr1_2:50034896-50034915 | Msa0074970:intron | 30.0% |
| GCAATGAGAATGATTCAATT+TGG | - | chr1_2:50035057-50035076 | Msa0074970:intron | 30.0% | |
| ATTGATGCATTATCAATTGC+AGG | - | chr1_2:50035120-50035139 | Msa0074970:intron | 30.0% | |
| TGGCACTAACATAAAACATA+AGG | + | chr1_2:50035172-50035191 | None:intergenic | 30.0% | |
| CAAATAACTAATAAGGTGGT+TGG | + | chr1_2:50035192-50035211 | None:intergenic | 30.0% | |
| AAAAACTGATATTGGAATGC+AGG | - | chr1_2:50035232-50035251 | Msa0074970:intron | 30.0% | |
| CTTCAAATTATTGCTCTGTT+TGG | - | chr1_2:50035409-50035428 | Msa0074970:intron | 30.0% | |
| TATAAACAAAGAAGGAGAAC+AGG | + | chr1_2:50035545-50035564 | None:intergenic | 30.0% | |
| GGTCAGATTATAAACAAAGA+AGG | + | chr1_2:50035553-50035572 | None:intergenic | 30.0% | |
| GATGTCAGGTAATTTATTGT+AGG | - | chr1_2:50035664-50035683 | Msa0074970:CDS | 30.0% | |
| CACAAATAAAACTAAGACTG+GGG | + | chr1_2:50035706-50035725 | None:intergenic | 30.0% | |
| CCACAAATAAAACTAAGACT+GGG | + | chr1_2:50035707-50035726 | None:intergenic | 30.0% | |
| ACCACAAATAAAACTAAGAC+TGG | + | chr1_2:50035708-50035727 | None:intergenic | 30.0% | |
| ! | GTGGTTGATTTCATTTCATA+TGG | - | chr1_2:50035723-50035742 | Msa0074970:intron | 30.0% |
| !!! | TTCATATGGATTTTGACTAG+GGG | - | chr1_2:50035737-50035756 | Msa0074970:intron | 30.0% |
| ATTATGTATGAATAAGTGGG+AGG | - | chr1_2:50035910-50035929 | Msa0074970:intron | 30.0% | |
| ACATTGATGGAAAAGACAAA+GGG | + | chr1_2:50036225-50036244 | None:intergenic | 30.0% | |
| ACTATATAAGCTTGGCTATT+TGG | - | chr1_2:50036255-50036274 | Msa0074970:intron | 30.0% | |
| ! | AATAGTTCTTTTGTGAAGAG+TGG | + | chr1_2:50036343-50036362 | None:intergenic | 30.0% |
| ACTCTTCACAAAAGAACTAT+TGG | - | chr1_2:50036342-50036361 | Msa0074970:CDS | 30.0% | |
| TTCACAAAAGAACTATTGGT+TGG | - | chr1_2:50036346-50036365 | Msa0074970:CDS | 30.0% | |
| !!! | GCCATTCTAGTTTTGTTATT+AGG | - | chr1_2:50036435-50036454 | Msa0074970:intron | 30.0% |
| CCCTAATAACAAAACTAGAA+TGG | + | chr1_2:50036439-50036458 | None:intergenic | 30.0% | |
| CCAATAAATAGAGAATGAGA+GGG | + | chr1_2:50036585-50036604 | None:intergenic | 30.0% | |
| TACCTATTCAGAAGAAACTA+AGG | - | chr1_2:50036946-50036965 | Msa0074970:intron | 30.0% | |
| ACCTATTCAGAAGAAACTAA+GGG | - | chr1_2:50036947-50036966 | Msa0074970:intron | 30.0% | |
| CCTGACTGAAATATATGAAA+AGG | + | chr1_2:50037315-50037334 | None:intergenic | 30.0% | |
| ! | CCTTTTCATATATTTCAGTC+AGG | - | chr1_2:50037312-50037331 | Msa0074970:CDS | 30.0% |
| TTGATGTAATCTACATCAGA+AGG | + | chr1_2:50037345-50037364 | None:intergenic | 30.0% | |
| ATGTTTGAATACTACAACAG+TGG | - | chr1_2:50037448-50037467 | Msa0074970:CDS | 30.0% | |
| ATCACCTGTATAAAGAATTC+TGG | + | chr1_2:50037505-50037524 | None:intergenic | 30.0% | |
| ! | CAGATGAGCATATAATTTGT+TGG | + | chr1_2:50037631-50037650 | None:intergenic | 30.0% |
| GTGAAATTATGGAACAGTTA+TGG | + | chr1_2:50037780-50037799 | None:intergenic | 30.0% | |
| !! | TCCATAATTTCACTGATTTC+AGG | - | chr1_2:50037787-50037806 | Msa0074970:intron | 30.0% |
| !! | CCATAATTTCACTGATTTCA+GGG | - | chr1_2:50037788-50037807 | Msa0074970:intron | 30.0% |
| !! | CATAATTTCACTGATTTCAG+GGG | - | chr1_2:50037789-50037808 | Msa0074970:intron | 30.0% |
| !! | ATAATTTCACTGATTTCAGG+GGG | - | chr1_2:50037790-50037809 | Msa0074970:intron | 30.0% |
| CACTATTAGATTAAGCATAC+AGG | + | chr1_2:50037971-50037990 | None:intergenic | 30.0% | |
| GTATGCTTAATCTAATAGTG+CGG | - | chr1_2:50037971-50037990 | Msa0074970:intron | 30.0% | |
| TTTGACATAGCTACTCTAAT+TGG | + | chr1_2:50038107-50038126 | None:intergenic | 30.0% | |
| !!! | ATGTCAAACTCTTTTGGTTT+TGG | - | chr1_2:50038119-50038138 | Msa0074970:intron | 30.0% |
| !!! | CAGAGCAGTTTTAAAATGTA+AGG | + | chr1_2:50038319-50038338 | None:intergenic | 30.0% |
| GCAATTGGAATAATCATAAG+AGG | + | chr1_2:50038394-50038413 | None:intergenic | 30.0% | |
| TGTATGGTGCAATTCTAAAT+AGG | - | chr1_2:50038437-50038456 | Msa0074970:CDS | 30.0% | |
| TTCTAAATAGGTCAGGAATA+AGG | - | chr1_2:50038449-50038468 | Msa0074970:CDS | 30.0% | |
| GATCTATTAAAACGTCTTAC+AGG | + | chr1_2:50038648-50038667 | None:intergenic | 30.0% | |
| ATCATTGATATCAGGTTAGA+CGG | + | chr1_2:50038733-50038752 | None:intergenic | 30.0% | |
| !! | TGAGTGTAGTTTGTTTGTGA+TGG | - | chr1_2:50032705-50032724 | Msa0074970:three_prime_UTR | 35.0% |
| ATCTGATATGCTTCGGTAAA+TGG | + | chr1_2:50032767-50032786 | None:intergenic | 35.0% | |
| CATAATTTGAGAGAAGGAGA+TGG | + | chr1_2:50032852-50032871 | None:intergenic | 35.0% | |
| ! | TGGCTTTTTGAATTGTACGT+AGG | - | chr1_2:50032902-50032921 | Msa0074970:three_prime_UTR | 35.0% |
| GGAAGTCAATTGATCAAATG+TGG | + | chr1_2:50033062-50033081 | None:intergenic | 35.0% | |
| TTTCGTTGTTGAATTCACCA+GGG | + | chr1_2:50033117-50033136 | None:intergenic | 35.0% | |
| ATTTCGTTGTTGAATTCACC+AGG | + | chr1_2:50033118-50033137 | None:intergenic | 35.0% | |
| TAGCATAGCTTATGAAGAGA+CGG | + | chr1_2:50033446-50033465 | None:intergenic | 35.0% | |
| AAGCTATGCTAGAGAACTTA+CGG | - | chr1_2:50033455-50033474 | Msa0074970:intron | 35.0% | |
| !! | AATTAGTCACTCTAAGACCA+TGG | - | chr1_2:50033572-50033591 | Msa0074970:intron | 35.0% |
| ! | AGATTGCTTTCTTTCAAGTC+AGG | + | chr1_2:50033705-50033724 | None:intergenic | 35.0% |
| AGTATTGTGACATTTCCCTT+AGG | - | chr1_2:50033877-50033896 | Msa0074970:CDS | 35.0% | |
| TGCTCAACTGATATGTGAAA+AGG | - | chr1_2:50034140-50034159 | Msa0074970:intron | 35.0% | |
| ACCACGGATATTGATAAACA+TGG | - | chr1_2:50034351-50034370 | Msa0074970:intron | 35.0% | |
| !!! | GGTCGCTAATTTTTTCTGAT+TGG | + | chr1_2:50034698-50034717 | None:intergenic | 35.0% |
| ! | GAGCTCTATCTTATTTCAAG+AGG | + | chr1_2:50034719-50034738 | None:intergenic | 35.0% |
| ! | AAGAGATTGGTTAGTCAATC+AGG | - | chr1_2:50034785-50034804 | Msa0074970:intron | 35.0% |
| ! | TTTTCCCTATTCCTGAATAC+AGG | - | chr1_2:50034978-50034997 | Msa0074970:intron | 35.0% |
| TTTCCCTATTCCTGAATACA+GGG | - | chr1_2:50034979-50034998 | Msa0074970:intron | 35.0% | |
| TAATGCATCAATACTGGACT+CGG | + | chr1_2:50035112-50035131 | None:intergenic | 35.0% | |
| ! | TTTTTACTCAGGATAGGTGA+AGG | - | chr1_2:50035456-50035475 | Msa0074970:intron | 35.0% |
| GCTCAAGTTCCTAAACAATA+GGG | + | chr1_2:50035595-50035614 | None:intergenic | 35.0% | |
| TGCTCAAGTTCCTAAACAAT+AGG | + | chr1_2:50035596-50035615 | None:intergenic | 35.0% | |
| ! | ACGAATCTCTGCATAGATTT+TGG | + | chr1_2:50035636-50035655 | None:intergenic | 35.0% |
| AAAATCTATGCAGAGATTCG+TGG | - | chr1_2:50035635-50035654 | Msa0074970:CDS | 35.0% | |
| !!! | CCCAGTCTTAGTTTTATTTG+TGG | - | chr1_2:50035704-50035723 | Msa0074970:intron | 35.0% |
| ACTCAAGTCCAAATTCTAAG+AGG | - | chr1_2:50035973-50035992 | Msa0074970:intron | 35.0% | |
| TATGCCAAAGTTAGAGTTGA+GGG | + | chr1_2:50036077-50036096 | None:intergenic | 35.0% | |
| TTATGCCAAAGTTAGAGTTG+AGG | + | chr1_2:50036078-50036097 | None:intergenic | 35.0% | |
| ATTGATGGAAAAGACAAAGG+GGG | + | chr1_2:50036223-50036242 | None:intergenic | 35.0% | |
| CATTGATGGAAAAGACAAAG+GGG | + | chr1_2:50036224-50036243 | None:intergenic | 35.0% | |
| GACATTGATGGAAAAGACAA+AGG | + | chr1_2:50036226-50036245 | None:intergenic | 35.0% | |
| CCCTCTCATTCTCTATTTAT+TGG | - | chr1_2:50036582-50036601 | Msa0074970:intron | 35.0% | |
| GCCAATAAATAGAGAATGAG+AGG | + | chr1_2:50036586-50036605 | None:intergenic | 35.0% | |
| TTTGTTAGTAGTTGGAAGCT+GGG | + | chr1_2:50036633-50036652 | None:intergenic | 35.0% | |
| TGCTAATATCTAACCAGTAC+TGG | + | chr1_2:50036767-50036786 | None:intergenic | 35.0% | |
| ACCCTTAGTTTCTTCTGAAT+AGG | + | chr1_2:50036951-50036970 | None:intergenic | 35.0% | |
| ATTAACACTTAGGGTGTGTT+TGG | + | chr1_2:50037198-50037217 | None:intergenic | 35.0% | |
| CTCACCAGAATTCTTTATAC+AGG | - | chr1_2:50037498-50037517 | Msa0074970:CDS | 35.0% | |
| CCCTGAAATCAGTGAAATTA+TGG | + | chr1_2:50037791-50037810 | None:intergenic | 35.0% | |
| TCAAAACGTTGCTTACATGT+CGG | + | chr1_2:50037877-50037896 | None:intergenic | 35.0% | |
| ! | TCTTTTGATGTTCTTATCCC+AGG | - | chr1_2:50037995-50038014 | Msa0074970:intron | 35.0% |
| ! | CTTTTGATGTTCTTATCCCA+GGG | - | chr1_2:50037996-50038015 | Msa0074970:intron | 35.0% |
| TTGTCACCAAATACAGAATC+TGG | + | chr1_2:50038053-50038072 | None:intergenic | 35.0% | |
| ! | GTAGCTATGTCAAACTCTTT+TGG | - | chr1_2:50038113-50038132 | Msa0074970:intron | 35.0% |
| !!! | TCAAACTCTTTTGGTTTTGG+AGG | - | chr1_2:50038122-50038141 | Msa0074970:intron | 35.0% |
| TCCAGAGTAAGCAAAAAGTA+GGG | + | chr1_2:50038159-50038178 | None:intergenic | 35.0% | |
| ATCCAGAGTAAGCAAAAAGT+AGG | + | chr1_2:50038160-50038179 | None:intergenic | 35.0% | |
| ! | ACTTTTTGCTTACTCTGGAT+CGG | - | chr1_2:50038160-50038179 | Msa0074970:intron | 35.0% |
| TCATGCTGAGGAGAATTTAA+TGG | - | chr1_2:50038243-50038262 | Msa0074970:intron | 35.0% | |
| AGATGTTCTCACAATGCAAT+TGG | + | chr1_2:50038409-50038428 | None:intergenic | 35.0% | |
| AATTGCATTGTGAGAACATC+TGG | - | chr1_2:50038408-50038427 | Msa0074970:CDS | 35.0% | |
| TAGAATTGCACCATACATCA+TGG | + | chr1_2:50038434-50038453 | None:intergenic | 35.0% | |
| AAATAGGTCAGGAATAAGGA+TGG | - | chr1_2:50038453-50038472 | Msa0074970:CDS | 35.0% | |
| TCTCGGTCATTGATCTAAAT+CGG | + | chr1_2:50038679-50038698 | None:intergenic | 35.0% | |
| CACAAACAAACTACACTCAC+TGG | + | chr1_2:50032704-50032723 | None:intergenic | 40.0% | |
| AAGGAGATGGAGTTACTAAC+CGG | + | chr1_2:50032839-50032858 | None:intergenic | 40.0% | |
| GTTGTGGAGTCCATAAAACA+TGG | - | chr1_2:50032948-50032967 | Msa0074970:three_prime_UTR | 40.0% | |
| CTTATGACATGTCCAAAAGC+TGG | + | chr1_2:50033494-50033513 | None:intergenic | 40.0% | |
| ! | CCTCTAAGAACTTATGGCAA+TGG | + | chr1_2:50033608-50033627 | None:intergenic | 40.0% |
| CCATTGCCATAAGTTCTTAG+AGG | - | chr1_2:50033605-50033624 | Msa0074970:CDS | 40.0% | |
| !! | ATTAATCAGGGGGTGTCTAT+TGG | - | chr1_2:50034081-50034100 | Msa0074970:CDS | 40.0% |
| TATGTGAAAAGGTCAGTTCG+TGG | - | chr1_2:50034151-50034170 | Msa0074970:intron | 40.0% | |
| !! | CTGATTCTGAAGTAGTTTGC+TGG | - | chr1_2:50034181-50034200 | Msa0074970:intron | 40.0% |
| GCCATGTTTATCAATATCCG+TGG | + | chr1_2:50034355-50034374 | None:intergenic | 40.0% | |
| GCCACGTTAGCATGAAATAT+GGG | - | chr1_2:50034380-50034399 | Msa0074970:intron | 40.0% | |
| ACCCATATTTCATGCTAACG+TGG | + | chr1_2:50034384-50034403 | None:intergenic | 40.0% | |
| TAGCATGAAATATGGGTTCC+AGG | - | chr1_2:50034387-50034406 | Msa0074970:intron | 40.0% | |
| TTATATCCGAAGTGACAGGT+AGG | + | chr1_2:50034747-50034766 | None:intergenic | 40.0% | |
| AGTCAATCAGGACATATCTC+AGG | - | chr1_2:50034797-50034816 | Msa0074970:intron | 40.0% | |
| TTCCCTATTCCTGAATACAG+GGG | - | chr1_2:50034980-50034999 | Msa0074970:intron | 40.0% | |
| ATTTGGGGATGCAGATGTTA+TGG | - | chr1_2:50035074-50035093 | Msa0074970:intron | 40.0% | |
| CAAAGAAGGAGAACAGGAAT+TGG | + | chr1_2:50035539-50035558 | None:intergenic | 40.0% | |
| ATTACTCAACCTCCTAGTGA+TGG | - | chr1_2:50035771-50035790 | Msa0074970:intron | 40.0% | |
| TTACTCAACCTCCTAGTGAT+GGG | - | chr1_2:50035772-50035791 | Msa0074970:intron | 40.0% | |
| !!! | CTGTTTTAAAGCACGAGTCA+TGG | + | chr1_2:50035814-50035833 | None:intergenic | 40.0% |
| !! | CATGACTCGTGCTTTAAAAC+AGG | - | chr1_2:50035812-50035831 | Msa0074970:CDS | 40.0% |
| TTCACCCTCAACTCTAACTT+TGG | - | chr1_2:50036070-50036089 | Msa0074970:intron | 40.0% | |
| ! | CTTTTCCATCAATGTCACTG+TGG | - | chr1_2:50036230-50036249 | Msa0074970:intron | 40.0% |
| CTGTGGCTACTATATAAGCT+TGG | - | chr1_2:50036247-50036266 | Msa0074970:intron | 40.0% | |
| ! | GTTCTTTTGTGAAGAGTGGT+GGG | + | chr1_2:50036339-50036358 | None:intergenic | 40.0% |
| ! | AGTTCTTTTGTGAAGAGTGG+TGG | + | chr1_2:50036340-50036359 | None:intergenic | 40.0% |
| AGTGGTAACCCAGAATTTCT+AGG | - | chr1_2:50036508-50036527 | Msa0074970:intron | 40.0% | |
| GTGGTAACCCAGAATTTCTA+GGG | - | chr1_2:50036509-50036528 | Msa0074970:intron | 40.0% | |
| ATTGGACATAGGGAGATTTG+CGG | + | chr1_2:50036536-50036555 | None:intergenic | 40.0% | |
| ! | ATACTGTCATTTGAGTGAGC+TGG | + | chr1_2:50036562-50036581 | None:intergenic | 40.0% |
| ! | GTTTGTTAGTAGTTGGAAGC+TGG | + | chr1_2:50036634-50036653 | None:intergenic | 40.0% |
| ! | ACGGAGTGTTTGTTAGTAGT+TGG | + | chr1_2:50036641-50036660 | None:intergenic | 40.0% |
| ! | TACTGGTTGTGGCAAAAGTT+TGG | + | chr1_2:50036750-50036769 | None:intergenic | 40.0% |
| !! | TATCTAACCAGTACTGGTTG+TGG | + | chr1_2:50036761-50036780 | None:intergenic | 40.0% |
| ! | GAAGAAACTAAGGGTGTGTT+TGG | - | chr1_2:50036956-50036975 | Msa0074970:intron | 40.0% |
| ! | AAACTAAGGGTGTGTTTGGA+TGG | - | chr1_2:50036960-50036979 | Msa0074970:intron | 40.0% |
| TTTGGATGGAGGGTTTAGAA+GGG | - | chr1_2:50036974-50036993 | Msa0074970:intron | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | + | chr1_2:50037180-50037199 | None:intergenic | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | + | chr1_2:50037184-50037203 | None:intergenic | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | + | chr1_2:50037190-50037209 | None:intergenic | 40.0% | |
| CATGCTACATCTACACCTTT+AGG | - | chr1_2:50037369-50037388 | Msa0074970:intron | 40.0% | |
| TTAAATTGCTGGAATCCGTG+AGG | + | chr1_2:50037413-50037432 | None:intergenic | 40.0% | |
| AAAGCTCTCATTCATGGGAA+TGG | - | chr1_2:50037690-50037709 | Msa0074970:CDS | 40.0% | |
| TAGATTAAGCATACAGGGTC+TGG | + | chr1_2:50037965-50037984 | None:intergenic | 40.0% | |
| ACAAGGCCAGATTCTGTATT+TGG | - | chr1_2:50038044-50038063 | Msa0074970:intron | 40.0% | |
| !! | ATCTCCTTTGAAGCAGTCAA+TGG | + | chr1_2:50038083-50038102 | None:intergenic | 40.0% |
| !!! | TCCCTACTTTTTGCTTACTC+TGG | - | chr1_2:50038155-50038174 | Msa0074970:intron | 40.0% |
| TAAGGAAAAGCTCGTACTTC+AGG | + | chr1_2:50038301-50038320 | None:intergenic | 40.0% | |
| GGTGCAATTCTAAATAGGTC+AGG | - | chr1_2:50038442-50038461 | Msa0074970:CDS | 40.0% | |
| CAAAACGAGGCATATTTGCA+GGG | + | chr1_2:50038560-50038579 | None:intergenic | 40.0% | |
| GGTCATTGATCTAAATCGGA+TGG | + | chr1_2:50038675-50038694 | None:intergenic | 40.0% | |
| TTGTTTGTGATGGCAATGCG+TGG | - | chr1_2:50032715-50032734 | Msa0074970:three_prime_UTR | 45.0% | |
| ACTCTTCGGGAAGAAACAAG+AGG | + | chr1_2:50032808-50032827 | None:intergenic | 45.0% | |
| AACCGGTGACAACTACTCTT+CGG | + | chr1_2:50032822-50032841 | None:intergenic | 45.0% | |
| ATTGTACGTAGGTTTGGGCA+TGG | - | chr1_2:50032913-50032932 | Msa0074970:three_prime_UTR | 45.0% | |
| TTATGGACTCCACAACCAAG+AGG | + | chr1_2:50032944-50032963 | None:intergenic | 45.0% | |
| ! | TTGATGGCAAATGTGGGGTA+AGG | - | chr1_2:50032981-50033000 | Msa0074970:three_prime_UTR | 45.0% |
| TGATGGCAAATGTGGGGTAA+GGG | - | chr1_2:50032982-50033001 | Msa0074970:three_prime_UTR | 45.0% | |
| CTCTCTCAAGTAGTCTCCTA+GGG | - | chr1_2:50033526-50033545 | Msa0074970:intron | 45.0% | |
| TCTCTCAAGTAGTCTCCTAG+GGG | - | chr1_2:50033527-50033546 | Msa0074970:intron | 45.0% | |
| ATCTACTAGCATAGTCCCCT+AGG | + | chr1_2:50033545-50033564 | None:intergenic | 45.0% | |
| TCACGGATCGATGTTCCTAA+GGG | + | chr1_2:50033895-50033914 | None:intergenic | 45.0% | |
| ! | TAATTGGTTTCCCACTGAGC+AGG | - | chr1_2:50033967-50033986 | Msa0074970:intron | 45.0% |
| GCAGGAACACAAGGAAAGAA+CGG | - | chr1_2:50033985-50034004 | Msa0074970:intron | 45.0% | |
| GGCCACGTTAGCATGAAATA+TGG | - | chr1_2:50034379-50034398 | Msa0074970:intron | 45.0% | |
| TAATGAGCTCCTGTAGTTGC+TGG | - | chr1_2:50034453-50034472 | Msa0074970:intron | 45.0% | |
| CAATCAGGACATATCTCAGG+TGG | - | chr1_2:50034800-50034819 | Msa0074970:intron | 45.0% | |
| ! | ATGATTTGGCCCCTGTATTC+AGG | + | chr1_2:50034992-50035011 | None:intergenic | 45.0% |
| GCTACTGGGTCACATTCTAT+TGG | - | chr1_2:50035030-50035049 | Msa0074970:intron | 45.0% | |
| GATGCAGATGTTATGGTGAC+TGG | - | chr1_2:50035081-50035100 | Msa0074970:intron | 45.0% | |
| CCATCTCGACCACTATCAAA+GGG | + | chr1_2:50035309-50035328 | None:intergenic | 45.0% | |
| TCCATCTCGACCACTATCAA+AGG | + | chr1_2:50035310-50035329 | None:intergenic | 45.0% | |
| !! | AGGTGAAGGTTCTGGAATCT+TGG | - | chr1_2:50035470-50035489 | Msa0074970:intron | 45.0% |
| !! | AGGTTCTGGAATCTTGGTCT+TGG | - | chr1_2:50035476-50035495 | Msa0074970:intron | 45.0% |
| !! | TTCTGGAATCTTGGTCTTGG+AGG | - | chr1_2:50035479-50035498 | Msa0074970:intron | 45.0% |
| GAAGGAGAACAGGAATTGGA+AGG | + | chr1_2:50035535-50035554 | None:intergenic | 45.0% | |
| CTTGAGCATGCTAAAAACCG+AGG | - | chr1_2:50035608-50035627 | Msa0074970:intron | 45.0% | |
| !!! | CTGCATAGATTTTGGCTCCT+CGG | + | chr1_2:50035628-50035647 | None:intergenic | 45.0% |
| TATGCAGAGATTCGTGGCTA+TGG | - | chr1_2:50035641-50035660 | Msa0074970:CDS | 45.0% | |
| ATGCAGAGATTCGTGGCTAT+GGG | - | chr1_2:50035642-50035661 | Msa0074970:CDS | 45.0% | |
| TGAGTCTAACTCAACCCCAA+AGG | + | chr1_2:50035958-50035977 | None:intergenic | 45.0% | |
| AGGCTCGACCTCTTAGAATT+TGG | + | chr1_2:50035984-50036003 | None:intergenic | 45.0% | |
| ! | TGACCACTATTCAAGCATCG+AGG | - | chr1_2:50036107-50036126 | Msa0074970:intron | 45.0% |
| AGACCTCGATGCTTGAATAG+TGG | + | chr1_2:50036113-50036132 | None:intergenic | 45.0% | |
| !! | ACTATTCAAGCATCGAGGTC+TGG | - | chr1_2:50036112-50036131 | Msa0074970:intron | 45.0% |
| TGATGTCAAGTCGTCAACCA+GGG | + | chr1_2:50036164-50036183 | None:intergenic | 45.0% | |
| AGTAGCCACAGTGACATTGA+TGG | + | chr1_2:50036238-50036257 | None:intergenic | 45.0% | |
| TAAGCTTGGCTATTTGGCGA+TGG | - | chr1_2:50036261-50036280 | Msa0074970:intron | 45.0% | |
| !!! | TTTTGTGAAGAGTGGTGGGT+GGG | + | chr1_2:50036335-50036354 | None:intergenic | 45.0% |
| AACTAGCAGCTATAGCGTAG+TGG | - | chr1_2:50036381-50036400 | Msa0074970:CDS | 45.0% | |
| ACAACTGCTATGGCTGAAAC+TGG | + | chr1_2:50036479-50036498 | None:intergenic | 45.0% | |
| TTCAGCCATAGCAGTTGTAG+TGG | - | chr1_2:50036481-50036500 | Msa0074970:intron | 45.0% | |
| TACTGCCACTACAACTGCTA+TGG | + | chr1_2:50036489-50036508 | None:intergenic | 45.0% | |
| TTGCGGACCCTAGAAATTCT+GGG | + | chr1_2:50036519-50036538 | None:intergenic | 45.0% | |
| TTTGCGGACCCTAGAAATTC+TGG | + | chr1_2:50036520-50036539 | None:intergenic | 45.0% | |
| ! | ACTTTTGCCACAACCAGTAC+TGG | - | chr1_2:50036751-50036770 | Msa0074970:intron | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | - | chr1_2:50036964-50036983 | Msa0074970:intron | 45.0% |
| GTTTGGATGGAGGGTTTAGA+AGG | - | chr1_2:50036973-50036992 | Msa0074970:intron | 45.0% | |
| TTGGATGGAGGGTTTAGAAG+GGG | - | chr1_2:50036975-50036994 | Msa0074970:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | + | chr1_2:50037179-50037198 | None:intergenic | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | + | chr1_2:50037181-50037200 | None:intergenic | 45.0% | |
| CTTAGGGTGTGTTTGGATTG+AGG | + | chr1_2:50037191-50037210 | None:intergenic | 45.0% | |
| GATCTGCTTCACTTGCCTAA+AGG | + | chr1_2:50037387-50037406 | None:intergenic | 45.0% | |
| GCTAGCATGGTCAGAGAATA+TGG | + | chr1_2:50037553-50037572 | None:intergenic | 45.0% | |
| CTAAAGAAGACGAGCTAGCA+TGG | + | chr1_2:50037566-50037585 | None:intergenic | 45.0% | |
| ! | TTTAGCCTTCTCATCCACCA+AGG | - | chr1_2:50037581-50037600 | Msa0074970:intron | 45.0% |
| ! | TCTTACCTTGGTGGATGAGA+AGG | + | chr1_2:50037589-50037608 | None:intergenic | 45.0% |
| ! | GACATTTTGTGTGCGAGTCA+CGG | - | chr1_2:50037895-50037914 | Msa0074970:intron | 45.0% |
| ! | ACATTTTGTGTGCGAGTCAC+GGG | - | chr1_2:50037896-50037915 | Msa0074970:intron | 45.0% |
| AGTTAATGGAGCGATTCCCT+GGG | + | chr1_2:50038015-50038034 | None:intergenic | 45.0% | |
| ! | CATGCCATTGACTGCTTCAA+AGG | - | chr1_2:50038076-50038095 | Msa0074970:intron | 45.0% |
| !! | CTGGATCGGACTAGTAAGAT+AGG | - | chr1_2:50038174-50038193 | Msa0074970:intron | 45.0% |
| CTCTTGTAGAATAACGCCTG+GGG | + | chr1_2:50038215-50038234 | None:intergenic | 45.0% | |
| GCTCTTGTAGAATAACGCCT+GGG | + | chr1_2:50038216-50038235 | None:intergenic | 45.0% | |
| AGCTCTTGTAGAATAACGCC+TGG | + | chr1_2:50038217-50038236 | None:intergenic | 45.0% | |
| AGAGCTAACACATCATGCTG+AGG | - | chr1_2:50038231-50038250 | Msa0074970:intron | 45.0% | |
| GAACATCTGGCCATGATGTA+TGG | - | chr1_2:50038421-50038440 | Msa0074970:CDS | 45.0% | |
| CCAAAACGAGGCATATTTGC+AGG | + | chr1_2:50038561-50038580 | None:intergenic | 45.0% | |
| ! | CCTGCAAATATGCCTCGTTT+TGG | - | chr1_2:50038558-50038577 | Msa0074970:intron | 45.0% |
| CAGGGACTAAAACCAAAACG+AGG | + | chr1_2:50038573-50038592 | None:intergenic | 45.0% | |
| TTTGTGATGGCAATGCGTGG+CGG | - | chr1_2:50032718-50032737 | Msa0074970:three_prime_UTR | 50.0% | |
| !! | GGAACATCGCGAAGGGTATT+GGG | - | chr1_2:50032739-50032758 | Msa0074970:three_prime_UTR | 50.0% |
| GAAGAAACAAGAGGAGGAGG+TGG | + | chr1_2:50032799-50032818 | None:intergenic | 50.0% | |
| CTTCGGGAAGAAACAAGAGG+AGG | + | chr1_2:50032805-50032824 | None:intergenic | 50.0% | |
| TCCCGAAGAGTAGTTGTCAC+CGG | - | chr1_2:50032817-50032836 | Msa0074970:three_prime_UTR | 50.0% | |
| ACCGGTGACAACTACTCTTC+GGG | + | chr1_2:50032821-50032840 | None:intergenic | 50.0% | |
| ATGGTGACACCTCTTGGTTG+TGG | - | chr1_2:50032932-50032951 | Msa0074970:three_prime_UTR | 50.0% | |
| AGGAACAAGCGCAGCAACTT+TGG | + | chr1_2:50033083-50033102 | None:intergenic | 50.0% | |
| GTTCCTACTGGAACTAACCC+TGG | - | chr1_2:50033097-50033116 | Msa0074970:three_prime_UTR | 50.0% | |
| !! | TCACCAGGGTTAGTTCCAGT+AGG | + | chr1_2:50033103-50033122 | None:intergenic | 50.0% |
| GCTCTCTCAAGTAGTCTCCT+AGG | - | chr1_2:50033525-50033544 | Msa0074970:intron | 50.0% | |
| GTCACGGATCGATGTTCCTA+AGG | + | chr1_2:50033896-50033915 | None:intergenic | 50.0% | |
| AGGAACATCGATCCGTGACA+AGG | - | chr1_2:50033897-50033916 | Msa0074970:CDS | 50.0% | |
| TCCTTGTGTTCCTGCTCAGT+GGG | + | chr1_2:50033980-50033999 | None:intergenic | 50.0% | |
| TTCCTTGTGTTCCTGCTCAG+TGG | + | chr1_2:50033981-50034000 | None:intergenic | 50.0% | |
| !! | AATCAGGGGGTGTCTATTGG+TGG | - | chr1_2:50034084-50034103 | Msa0074970:CDS | 50.0% |
| !! | ATCAGGGGGTGTCTATTGGT+GGG | - | chr1_2:50034085-50034104 | Msa0074970:CDS | 50.0% |
| ! | CTCCTTCCTACCTGTCACTT+CGG | - | chr1_2:50034738-50034757 | Msa0074970:intron | 50.0% |
| ATCCGAAGTGACAGGTAGGA+AGG | + | chr1_2:50034743-50034762 | None:intergenic | 50.0% | |
| GGCCCCTGTATTCAGGAATA+GGG | + | chr1_2:50034985-50035004 | None:intergenic | 50.0% | |
| TGGCCCCTGTATTCAGGAAT+AGG | + | chr1_2:50034986-50035005 | None:intergenic | 50.0% | |
| GCAGTGACTGCAGCATGATT+TGG | + | chr1_2:50035006-50035025 | None:intergenic | 50.0% | |
| ! | CAGTCACTGCTTGTGCTACT+GGG | - | chr1_2:50035016-50035035 | Msa0074970:intron | 50.0% |
| GCAGATGTTATGGTGACTGG+AGG | - | chr1_2:50035084-50035103 | Msa0074970:intron | 50.0% | |
| !! | CCCTTTGATAGTGGTCGAGA+TGG | - | chr1_2:50035306-50035325 | Msa0074970:intron | 50.0% |
| CTCAGGATAGGTGAAGGTTC+TGG | - | chr1_2:50035462-50035481 | Msa0074970:intron | 50.0% | |
| ATTCGTGGCTATGGGATGTC+AGG | - | chr1_2:50035650-50035669 | Msa0074970:CDS | 50.0% | |
| ! | AACCCCAAAGGCTAGCTCAT+GGG | + | chr1_2:50035946-50035965 | None:intergenic | 50.0% |
| !! | ATTCAAGCATCGAGGTCTGG+CGG | - | chr1_2:50036115-50036134 | Msa0074970:intron | 50.0% |
| GTGATGTCAAGTCGTCAACC+AGG | + | chr1_2:50036165-50036184 | None:intergenic | 50.0% | |
| GACGACTTGACATCACCCAA+AGG | - | chr1_2:50036169-50036188 | Msa0074970:CDS | 50.0% | |
| GGAAAAGACAAAGGGGGAGA+TGG | + | chr1_2:50036217-50036236 | None:intergenic | 50.0% | |
| !! | CTTTTGTGAAGAGTGGTGGG+TGG | + | chr1_2:50036336-50036355 | None:intergenic | 50.0% |
| AGCAGTTGTAGTGGCAGTAG+TGG | - | chr1_2:50036490-50036509 | Msa0074970:intron | 50.0% | |
| ATTTGAGTGAGCTGGCGCAT+TGG | + | chr1_2:50036554-50036573 | None:intergenic | 50.0% | |
| ! | CTAAGGGTGTGTTTGGATGG+AGG | - | chr1_2:50036963-50036982 | Msa0074970:intron | 50.0% |
| ATGGAGGGTTTAGAAGGGGA+AGG | - | chr1_2:50036979-50036998 | Msa0074970:intron | 50.0% | |
| TGGAGGGTTTAGAAGGGGAA+GGG | - | chr1_2:50036980-50036999 | Msa0074970:intron | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | + | chr1_2:50037174-50037193 | None:intergenic | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | + | chr1_2:50037175-50037194 | None:intergenic | 50.0% | |
| GTGAAGCAGATCCATCCTCA+CGG | - | chr1_2:50037395-50037414 | Msa0074970:intron | 50.0% | |
| ATTGCTGGAATCCGTGAGGA+TGG | + | chr1_2:50037409-50037428 | None:intergenic | 50.0% | |
| CTCATCCACCAAGGTAAGAG+TGG | - | chr1_2:50037590-50037609 | Msa0074970:intron | 50.0% | |
| TGCAACCACTCTTACCTTGG+TGG | + | chr1_2:50037598-50037617 | None:intergenic | 50.0% | |
| GCTTGCAACCACTCTTACCT+TGG | + | chr1_2:50037601-50037620 | None:intergenic | 50.0% | |
| !! | CACTGATTTCAGGGGGCTAT+TGG | - | chr1_2:50037797-50037816 | Msa0074970:intron | 50.0% |
| ! | CATTTTGTGTGCGAGTCACG+GGG | - | chr1_2:50037897-50037916 | Msa0074970:intron | 50.0% |
| GAGTTAATGGAGCGATTCCC+TGG | + | chr1_2:50038016-50038035 | None:intergenic | 50.0% | |
| GTGCATCTCATTCATTCCCC+AGG | - | chr1_2:50038196-50038215 | Msa0074970:intron | 50.0% | |
| ! | CGGAACATCGCGAAGGGTAT+TGG | - | chr1_2:50032738-50032757 | Msa0074970:three_prime_UTR | 55.0% |
| CGGGAAGAAACAAGAGGAGG+AGG | + | chr1_2:50032802-50032821 | None:intergenic | 55.0% | |
| TTGGGCATGGTGACACCTCT+TGG | - | chr1_2:50032926-50032945 | Msa0074970:three_prime_UTR | 55.0% | |
| GTTGCTGCGCTTGTTCCTAC+TGG | - | chr1_2:50033085-50033104 | Msa0074970:three_prime_UTR | 55.0% | |
| GCAATGGCAGCTTTGCACCA+TGG | + | chr1_2:50033592-50033611 | None:intergenic | 55.0% | |
| TCCCACTGAGCAGGAACACA+AGG | - | chr1_2:50033976-50033995 | Msa0074970:intron | 55.0% | |
| !! | TCAGGGGGTGTCTATTGGTG+GGG | - | chr1_2:50034086-50034105 | Msa0074970:CDS | 55.0% |
| GTGTCTATTGGTGGGGGAAC+TGG | - | chr1_2:50034093-50034112 | Msa0074970:CDS | 55.0% | |
| CGCTGCATACAGGGGAGAAT+AGG | + | chr1_2:50034304-50034323 | None:intergenic | 55.0% | |
| GACGAAGACGCTGCATACAG+GGG | + | chr1_2:50034312-50034331 | None:intergenic | 55.0% | |
| CGACGAAGACGCTGCATACA+GGG | + | chr1_2:50034313-50034332 | None:intergenic | 55.0% | |
| AGCTCCTGTAGTTGCTGGAC+AGG | - | chr1_2:50034458-50034477 | Msa0074970:intron | 55.0% | |
| GTTGCCTGTCCAGCAACTAC+AGG | + | chr1_2:50034465-50034484 | None:intergenic | 55.0% | |
| GCAGTCACTGCTTGTGCTAC+TGG | - | chr1_2:50035015-50035034 | Msa0074970:intron | 55.0% | |
| !! | CAAGCCCACAAGAAGCATCG+CGG | - | chr1_2:50035283-50035302 | Msa0074970:intron | 55.0% |
| ! | CAACCTCCTAGTGATGGGAG+AGG | - | chr1_2:50035777-50035796 | Msa0074970:intron | 55.0% |
| ATGGCACCTCTCCCATCACT+AGG | + | chr1_2:50035786-50035805 | None:intergenic | 55.0% | |
| !! | TGATGGGAGAGGTGCCATTC+TGG | - | chr1_2:50035788-50035807 | Msa0074970:CDS | 55.0% |
| AGCACGAGTCATGGCCAGAA+TGG | + | chr1_2:50035805-50035824 | None:intergenic | 55.0% | |
| ! | AAGGCTAGCTCATGGGGTGA+GGG | + | chr1_2:50035939-50035958 | None:intergenic | 55.0% |
| ! | AAAGGCTAGCTCATGGGGTG+AGG | + | chr1_2:50035940-50035959 | None:intergenic | 55.0% |
| !! | TCACCCCATGAGCTAGCCTT+TGG | - | chr1_2:50035939-50035958 | Msa0074970:intron | 55.0% |
| !! | CACCCCATGAGCTAGCCTTT+GGG | - | chr1_2:50035940-50035959 | Msa0074970:intron | 55.0% |
| !! | ACCCCATGAGCTAGCCTTTG+GGG | - | chr1_2:50035941-50035960 | Msa0074970:intron | 55.0% |
| ! | ACCCCAAAGGCTAGCTCATG+GGG | + | chr1_2:50035945-50035964 | None:intergenic | 55.0% |
| ! | CAACCCCAAAGGCTAGCTCA+TGG | + | chr1_2:50035947-50035966 | None:intergenic | 55.0% |
| AGGGCAAGAGCTAAGGCTTG+AGG | + | chr1_2:50036004-50036023 | None:intergenic | 55.0% | |
| TTGGGAGAGGGCAAGAGCTA+AGG | + | chr1_2:50036011-50036030 | None:intergenic | 55.0% | |
| !! | AGGTCTGGCGGTTTTGGCAA+TGG | - | chr1_2:50036127-50036146 | Msa0074970:CDS | 55.0% |
| CAATGGAAGCTTGTCCACCC+TGG | - | chr1_2:50036144-50036163 | Msa0074970:CDS | 55.0% | |
| TGTCAAGTCGTCAACCAGGG+TGG | + | chr1_2:50036161-50036180 | None:intergenic | 55.0% | |
| GAGCTGGCGCATTGGACATA+GGG | + | chr1_2:50036546-50036565 | None:intergenic | 55.0% | |
| TGAGCTGGCGCATTGGACAT+AGG | + | chr1_2:50036547-50036566 | None:intergenic | 55.0% | |
| AGGGTTTAGAAGGGGAAGGG+AGG | - | chr1_2:50036983-50037002 | Msa0074970:intron | 55.0% | |
| GGGTTTAGAAGGGGAAGGGA+GGG | - | chr1_2:50036984-50037003 | Msa0074970:intron | 55.0% | |
| GGTTTAGAAGGGGAAGGGAG+GGG | - | chr1_2:50036985-50037004 | Msa0074970:intron | 55.0% | |
| GGGGCTATTGGTCATCTCCT+TGG | - | chr1_2:50037809-50037828 | Msa0074970:intron | 55.0% | |
| !! | TGGGGTAAGGGCACTGCGTT+TGG | - | chr1_2:50032994-50033013 | Msa0074970:three_prime_UTR | 60.0% |
| !! | GGTAAGGGCACTGCGTTTGG+AGG | - | chr1_2:50032997-50033016 | Msa0074970:three_prime_UTR | 60.0% |
| !! | CAGGGGGTGTCTATTGGTGG+GGG | - | chr1_2:50034087-50034106 | Msa0074970:CDS | 60.0% |
| GCGACGAAGACGCTGCATAC+AGG | + | chr1_2:50034314-50034333 | None:intergenic | 60.0% | |
| AGGGCCGCGATGCTTCTTGT+GGG | + | chr1_2:50035290-50035309 | None:intergenic | 60.0% | |
| AAGGGCCGCGATGCTTCTTG+TGG | + | chr1_2:50035291-50035310 | None:intergenic | 60.0% | |
| GCATCGCGGCCCTTTGATAG+TGG | - | chr1_2:50035297-50035316 | Msa0074970:intron | 60.0% | |
| GCACCTCTCCCATCACTAGG+AGG | + | chr1_2:50035783-50035802 | None:intergenic | 60.0% | |
| ! | GCATCGAGGTCTGGCGGTTT+TGG | - | chr1_2:50036121-50036140 | Msa0074970:CDS | 60.0% |
| TTAGAAGGGGAAGGGAGGGG+AGG | - | chr1_2:50036988-50037007 | Msa0074970:intron | 60.0% | |
| TAGAAGGGGAAGGGAGGGGA+GGG | - | chr1_2:50036989-50037008 | Msa0074970:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | + | chr1_2:50037169-50037188 | None:intergenic | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | + | chr1_2:50037170-50037189 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | + | chr1_2:50037171-50037190 | None:intergenic | 60.0% | |
| !! | GGTCATCTCCTTGGTGCTGC+TGG | - | chr1_2:50037818-50037837 | Msa0074970:intron | 60.0% |
| CAACAGCTCCAGCAGCACCA+AGG | + | chr1_2:50037829-50037848 | None:intergenic | 60.0% | |
| ! | TGCGTGGCGGAACATCGCGA+AGG | - | chr1_2:50032731-50032750 | Msa0074970:three_prime_UTR | 65.0% |
| ! | GCGTGGCGGAACATCGCGAA+GGG | - | chr1_2:50032732-50032751 | Msa0074970:three_prime_UTR | 65.0% |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr1_2:50037166-50037185 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 50032687 | 50038766 | 50032687 | ID=Msa0074970;Name=Msa0074970 |
| chr1_2 | mRNA | 50032687 | 50038766 | 50032687 | ID=Msa0074970-mRNA-1;Parent=Msa0074970;Name=Msa0074970-mRNA-1;_AED=0.12;_eAED=0.13;_QI=37|0.78|0.73|0.93|1|1|15|579|487 |
| chr1_2 | exon | 50032687 | 50033436 | 50032687 | ID=Msa0074970-mRNA-1:exon:15391;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50033573 | 50033644 | 50033573 | ID=Msa0074970-mRNA-1:exon:15390;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50033851 | 50033947 | 50033851 | ID=Msa0074970-mRNA-1:exon:15389;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50034059 | 50034123 | 50034059 | ID=Msa0074970-mRNA-1:exon:15388;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50035620 | 50035696 | 50035620 | ID=Msa0074970-mRNA-1:exon:15387;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50035782 | 50035848 | 50035782 | ID=Msa0074970-mRNA-1:exon:15386;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50035953 | 50035986 | 50035953 | ID=Msa0074970-mRNA-1:exon:15385;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50036119 | 50036199 | 50036119 | ID=Msa0074970-mRNA-1:exon:15384;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50036302 | 50036453 | 50036302 | ID=Msa0074970-mRNA-1:exon:15383;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50037045 | 50037131 | 50037045 | ID=Msa0074970-mRNA-1:exon:15382;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50037292 | 50037363 | 50037292 | ID=Msa0074970-mRNA-1:exon:15381;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50037447 | 50037554 | 50037447 | ID=Msa0074970-mRNA-1:exon:15380;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50037664 | 50037734 | 50037664 | ID=Msa0074970-mRNA-1:exon:15379;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50038335 | 50038529 | 50038335 | ID=Msa0074970-mRNA-1:exon:15378;Parent=Msa0074970-mRNA-1 |
| chr1_2 | exon | 50038615 | 50038766 | 50038615 | ID=Msa0074970-mRNA-1:exon:15377;Parent=Msa0074970-mRNA-1 |
| chr1_2 | five_prime_UTR | 50038730 | 50038766 | 50038730 | ID=Msa0074970-mRNA-1:five_prime_utr;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50038615 | 50038729 | 50038615 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50038335 | 50038529 | 50038335 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50037664 | 50037734 | 50037664 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50037447 | 50037554 | 50037447 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50037292 | 50037363 | 50037292 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50037045 | 50037131 | 50037045 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50036302 | 50036453 | 50036302 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50036119 | 50036199 | 50036119 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50035953 | 50035986 | 50035953 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50035782 | 50035848 | 50035782 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50035620 | 50035696 | 50035620 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50034059 | 50034123 | 50034059 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50033851 | 50033947 | 50033851 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50033573 | 50033644 | 50033573 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | CDS | 50033266 | 50033436 | 50033266 | ID=Msa0074970-mRNA-1:cds;Parent=Msa0074970-mRNA-1 |
| chr1_2 | three_prime_UTR | 50032687 | 50033265 | 50032687 | ID=Msa0074970-mRNA-1:three_prime_utr;Parent=Msa0074970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
