Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385960 | XP_003593528.2 | 98.659 | 522 | 4 | 1 | 51 | 569 | 1 | 522 | 0.0 | 1063 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385960 | sp|Q9ZR39|U2A2A_NICPL | 64.303 | 409 | 128 | 5 | 167 | 568 | 157 | 554 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385960 | G7IP17 | 98.659 | 522 | 4 | 1 | 51 | 569 | 1 | 522 | 0.0 | 1063 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1385960 | Msa1417120 | 0.831511 | 1.601485e-55 | -8.615850e-47 |
| Msa0191970 | Msa1385960 | 0.968866 | 2.728702e-129 | -8.615850e-47 |
| Msa1087880 | Msa1385960 | 0.965253 | 2.296057e-124 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385960 | MtrunA17_Chr2g0281891 | 98.659 | 522 | 4 | 1 | 51 | 569 | 1 | 522 | 0.0 | 1063 |
| Msa1385960 | MtrunA17_Chr3g0077591 | 65.435 | 379 | 111 | 5 | 199 | 568 | 4 | 371 | 6.05e-174 | 496 |
| Msa1385960 | MtrunA17_Chr4g0013971 | 64.491 | 383 | 118 | 5 | 193 | 568 | 55 | 426 | 9.48e-173 | 496 |
| Msa1385960 | MtrunA17_Chr1g0166661 | 27.885 | 416 | 237 | 16 | 139 | 526 | 470 | 850 | 8.93e-29 | 122 |
| Msa1385960 | MtrunA17_Chr1g0201001 | 43.056 | 72 | 41 | 0 | 347 | 418 | 31 | 102 | 4.03e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385960 | AT1G60900.1 | 61.667 | 420 | 121 | 5 | 168 | 568 | 190 | 588 | 3.84e-179 | 518 |
| Msa1385960 | AT4G36690.4 | 52.941 | 527 | 209 | 10 | 67 | 567 | 36 | 549 | 4.30e-174 | 504 |
| Msa1385960 | AT4G36690.1 | 61.594 | 414 | 138 | 7 | 164 | 567 | 169 | 571 | 1.14e-171 | 499 |
| Msa1385960 | AT4G36690.2 | 62.464 | 349 | 110 | 7 | 164 | 502 | 169 | 506 | 1.87e-140 | 418 |
| Msa1385960 | AT4G36690.3 | 62.178 | 349 | 111 | 7 | 164 | 502 | 169 | 506 | 2.02e-139 | 416 |
| Msa1385960 | AT1G60830.2 | 55.769 | 104 | 46 | 0 | 465 | 568 | 7 | 110 | 6.23e-36 | 130 |
| Msa1385960 | AT1G60830.1 | 55.769 | 104 | 46 | 0 | 465 | 568 | 7 | 110 | 6.23e-36 | 130 |
| Msa1385960 | AT2G33435.1 | 27.737 | 411 | 218 | 12 | 134 | 509 | 771 | 1137 | 4.69e-32 | 132 |
| Msa1385960 | AT5G09880.1 | 26.065 | 399 | 196 | 17 | 225 | 564 | 165 | 523 | 5.10e-17 | 84.7 |
| Msa1385960 | AT1G71800.1 | 55.102 | 49 | 22 | 0 | 347 | 395 | 11 | 59 | 4.22e-11 | 65.9 |
Find 157 sgRNAs with CRISPR-Local
Find 570 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCTAAATGGTAGGAAATT+TGG | 0.114660 | tig0020780:+13788 | Msa1385960:CDS |
| CACTGGAAAATAACGTTTAT+TGG | 0.182085 | tig0020780:+14036 | Msa1385960:three_prime_UTR |
| CTCTAAATGGTAGGAAATTT+GGG | 0.201789 | tig0020780:+13789 | Msa1385960:CDS |
| GTTTCTCTTGTAGGTGTTCT+TGG | 0.203987 | tig0020780:+13727 | Msa1385960:intron |
| CGCTCTCAATGGCCTTAAAA+TGG | 0.209077 | tig0020780:+11425 | Msa1385960:CDS |
| AGAGAATTGCTTCAAGCTTT+TGG | 0.220313 | tig0020780:+10984 | Msa1385960:CDS |
| GGTGTAACACCCACTGTTTC+AGG | 0.230262 | tig0020780:+7108 | Msa1385960:CDS |
| CGGGATGAATGCCGCAAATT+TGG | 0.236754 | tig0020780:+12782 | Msa1385960:CDS |
| AACACACGAAGAATCAATTT+AGG | 0.238106 | tig0020780:+5542 | Msa1385960:CDS |
| CCTTCATTAGCTGCAGTTCT+AGG | 0.238709 | tig0020780:+10722 | Msa1385960:CDS |
| GCAAAGATGTTATCCTCTTC+TGG | 0.283444 | tig0020780:-12293 | None:intergenic |
| ACTGAACAATTAACTGATAA+TGG | 0.287828 | tig0020780:+12731 | Msa1385960:CDS |
| ACAGGAAATTCTAAAGGATA+TGG | 0.293149 | tig0020780:+11190 | Msa1385960:CDS |
| GACAGCTCTCCGTTTGGATT+TGG | 0.294715 | tig0020780:-13441 | None:intergenic |
| AGCCAAGTCATGATTGCTAT+TGG | 0.298202 | tig0020780:+8666 | Msa1385960:CDS |
| GCCAAGTCATGATTGCTATT+GGG | 0.324763 | tig0020780:+8667 | Msa1385960:CDS |
| TGAGAAGAAATTTGCGTTTG+TGG | 0.342929 | tig0020780:+9039 | Msa1385960:CDS |
| TGTACTTCAGTAAAGTAGTA+TGG | 0.344863 | tig0020780:-10957 | None:intergenic |
| ACACACGAAGAATCAATTTA+GGG | 0.348931 | tig0020780:+5543 | Msa1385960:CDS |
| ATAGTTAGAGATAAAGAAAC+AGG | 0.353650 | tig0020780:+11172 | Msa1385960:CDS |
| AAGCAAACCTGTTGTGTCAT+AGG | 0.354698 | tig0020780:-7893 | None:intergenic |
| TCATCGTTTGTTGGGACTCC+TGG | 0.357389 | tig0020780:-12460 | None:intergenic |
| TGGAGAATATGAAGAAATAT+TGG | 0.357494 | tig0020780:+12751 | Msa1385960:CDS |
| GGAGAGCTGTCTACAGGAAT+TGG | 0.374888 | tig0020780:+13453 | Msa1385960:CDS |
| ACACAAAATTTCTCACCATA+TGG | 0.382567 | tig0020780:+7745 | Msa1385960:CDS |
| TCTGCTGTTGGACTTTCTGC+AGG | 0.385674 | tig0020780:+10776 | Msa1385960:CDS |
| ATATGGTTTCTGCATCTATC+AGG | 0.394770 | tig0020780:+11207 | Msa1385960:CDS |
| GTGGGGCTTTCATCGTTTGT+TGG | 0.399818 | tig0020780:-12469 | None:intergenic |
| TGGGGCTTTCATCGTTTGTT+GGG | 0.403041 | tig0020780:-12468 | None:intergenic |
| TATGATTTGTAACCGATTGT+AGG | 0.404522 | tig0020780:+13866 | Msa1385960:exon |
| TTCCCACTTTCCAGTACAAT+TGG | 0.408387 | tig0020780:+10894 | Msa1385960:intron |
| GAGGTTTGCACTTGGCTGGC+AGG | 0.410052 | tig0020780:-10747 | None:intergenic |
| GGGACTTGATCGCATCTTTG+TGG | 0.411118 | tig0020780:+10926 | Msa1385960:CDS |
| TTCAGATTGAGAAGGGGATC+TGG | 0.415093 | tig0020780:-6649 | None:intergenic |
| GCAAAAGGAAGCACCTTGTC+GGG | 0.416096 | tig0020780:-5659 | None:intergenic |
| GTCTACAGCAAAAGGACCTC+TGG | 0.423373 | tig0020780:+7060 | Msa1385960:intron |
| TGAGAAGGAGAGATGGAGAC+AGG | 0.430183 | tig0020780:+6299 | Msa1385960:CDS |
| AGCAATGCAATGGCTTTAGA+TGG | 0.433781 | tig0020780:+9085 | Msa1385960:CDS |
| TTCCTGACTTACAGGTGATT+CGG | 0.435169 | tig0020780:+8994 | Msa1385960:intron |
| TGACCAGATCCATGGGAACT+TGG | 0.436941 | tig0020780:-6262 | None:intergenic |
| CCTGTAGACAGCTCTCCGTT+TGG | 0.443182 | tig0020780:-13447 | None:intergenic |
| AGAGATACAAGGAACAGATA+TGG | 0.454398 | tig0020780:+6579 | Msa1385960:CDS |
| AAAATAGCGTTGGAAGTGGT+TGG | 0.455818 | tig0020780:+12427 | Msa1385960:CDS |
| CTCAGTTAAACATAAAACTT+TGG | 0.457841 | tig0020780:-12491 | None:intergenic |
| AGGTTTGCACTTGGCTGGCA+GGG | 0.458606 | tig0020780:-10746 | None:intergenic |
| GGACTTGATCGCATCTTTGT+GGG | 0.458801 | tig0020780:+10927 | Msa1385960:CDS |
| CATTATATATGTAATAAACT+TGG | 0.458814 | tig0020780:-13963 | None:intergenic |
| AGTTGAGGTTTGCACTTGGC+TGG | 0.465507 | tig0020780:-10751 | None:intergenic |
| CCTAGAACTGCAGCTAATGA+AGG | 0.469669 | tig0020780:-10722 | None:intergenic |
| TAGTAATGCAGGGCAAATGC+TGG | 0.469899 | tig0020780:+7696 | Msa1385960:intron |
| GTGGTTGGGCTAAATATTCC+AGG | 0.472321 | tig0020780:+12442 | Msa1385960:CDS |
| GCAGATATGACAGTTATAAT+CGG | 0.474034 | tig0020780:+6386 | Msa1385960:CDS |
| GCTCTCAATGGCCTTAAAAT+GGG | 0.475203 | tig0020780:+11426 | Msa1385960:CDS |
| AAGCGAGGAAGGTGATGAAA+TGG | 0.476412 | tig0020780:-5586 | None:intergenic |
| GAGATAAAACATTGACTGTA+AGG | 0.479393 | tig0020780:+11448 | Msa1385960:CDS |
| TGCAAAAGGAAGCACCTTGT+CGG | 0.480254 | tig0020780:-5660 | None:intergenic |
| CAGCCAAGTTCCCATGGATC+TGG | 0.480725 | tig0020780:+6259 | Msa1385960:intron |
| CCAAGTCATGATTGCTATTG+GGG | 0.481165 | tig0020780:+8668 | Msa1385960:CDS |
| CCCCAATAGCAATCATGACT+TGG | 0.483072 | tig0020780:-8668 | None:intergenic |
| GGGATTGCTCATATGATTCA+AGG | 0.484306 | tig0020780:+7718 | Msa1385960:CDS |
| ATTGCTTGTGCCGCTCTCAA+TGG | 0.485447 | tig0020780:+11414 | Msa1385960:CDS |
| CCACTTTCCAGTACAATTGG+TGG | 0.487543 | tig0020780:+10897 | Msa1385960:intron |
| ATGATTTGTAACCGATTGTA+GGG | 0.489405 | tig0020780:+13867 | Msa1385960:exon |
| CAAGCAATGTCTGTTACTGC+TGG | 0.489517 | tig0020780:-11399 | None:intergenic |
| AACCTCAACTTATCTGCTGT+TGG | 0.490163 | tig0020780:+10764 | Msa1385960:CDS |
| CACAAAATTTCTCACCATAT+GGG | 0.492872 | tig0020780:+7746 | Msa1385960:CDS |
| AGTTCAACCTATGACACAAC+AGG | 0.496059 | tig0020780:+7886 | Msa1385960:CDS |
| TGCTCTCATGACCAGATCCA+TGG | 0.496123 | tig0020780:-6270 | None:intergenic |
| CTGTAAGGCGTGCTACTGTC+AGG | 0.497970 | tig0020780:+11463 | Msa1385960:CDS |
| AAATAGCGTTGGAAGTGGTT+GGG | 0.499842 | tig0020780:+12428 | Msa1385960:CDS |
| CAACATGCATACCAAATTTG+CGG | 0.500951 | tig0020780:-12793 | None:intergenic |
| TCAACAGCATATAGCTATGC+AGG | 0.501613 | tig0020780:+12322 | Msa1385960:CDS |
| TCTCCGTTTGGATTTGGACG+AGG | 0.503529 | tig0020780:-13435 | None:intergenic |
| TGATGTGTTCATGCATTCAC+TGG | 0.507797 | tig0020780:+14019 | Msa1385960:three_prime_UTR |
| TTATCGATGTCAGACATTGC+AGG | 0.508918 | tig0020780:-5611 | None:intergenic |
| GCTCGGCGAGTGTACGTTGG+TGG | 0.509407 | tig0020780:+8011 | Msa1385960:CDS |
| CACAGAGATGATAAATATGA+AGG | 0.509599 | tig0020780:+6349 | Msa1385960:CDS |
| AGTAATGCAGGGCAAATGCT+GGG | 0.509613 | tig0020780:+7697 | Msa1385960:intron |
| CTTGATCGCATCTTTGTGGG+TGG | 0.510330 | tig0020780:+10930 | Msa1385960:CDS |
| GTTAAACATAAAACTTTGGT+GGG | 0.510619 | tig0020780:-12487 | None:intergenic |
| AGAAATATTGGAAGACATGC+GGG | 0.510930 | tig0020780:+12763 | Msa1385960:CDS |
| CCAAACGGAGAGCTGTCTAC+AGG | 0.512561 | tig0020780:+13447 | Msa1385960:CDS |
| CTCGGCGAGTGTACGTTGGT+GGG | 0.513430 | tig0020780:+8012 | Msa1385960:CDS |
| GAGCACATTCAAAGAGATCC+AGG | 0.515574 | tig0020780:+6601 | Msa1385960:CDS |
| ATTGGAATGTACAGGGACCT+TGG | 0.522185 | tig0020780:+13398 | Msa1385960:intron |
| AGAACCTGCTCGTTAGCAAA+AGG | 0.522299 | tig0020780:-8041 | None:intergenic |
| AAAGAAACAGGAAATTCTAA+AGG | 0.522577 | tig0020780:+11184 | Msa1385960:CDS |
| AACGTGGCCGTGATTATGAT+AGG | 0.523655 | tig0020780:+6410 | Msa1385960:CDS |
| GACATGGCACCACCTGCTAC+CGG | 0.523878 | tig0020780:+7087 | Msa1385960:CDS |
| ATTATATCTCTCCCTACAAT+CGG | 0.524407 | tig0020780:-13878 | None:intergenic |
| AGTTAAACATAAAACTTTGG+TGG | 0.525483 | tig0020780:-12488 | None:intergenic |
| TTGATCGCATCTTTGTGGGT+GGG | 0.533344 | tig0020780:+10931 | Msa1385960:CDS |
| ATGAGAGCACGAGGATGAGA+AGG | 0.534810 | tig0020780:+6284 | Msa1385960:CDS |
| CTGCTGTTGGACTTTCTGCA+GGG | 0.535511 | tig0020780:+10777 | Msa1385960:CDS |
| AGCACCTGCGATATCCCATA+TGG | 0.536316 | tig0020780:-7760 | None:intergenic |
| CTCCGTTTGGATTTGGACGA+GGG | 0.536853 | tig0020780:-13434 | None:intergenic |
| TGTACCCTTCAGATTGAGAA+GGG | 0.544685 | tig0020780:-6656 | None:intergenic |
| CATTGCAGGGAAAGCGAGGA+AGG | 0.546452 | tig0020780:-5597 | None:intergenic |
| AAAAGGCTACAAGGCATGCT+CGG | 0.555867 | tig0020780:+7994 | Msa1385960:intron |
| ATCCCTCGTCCAAATCCAAA+CGG | 0.557458 | tig0020780:+13432 | Msa1385960:CDS |
| GTCCAACAGCAGATAAGTTG+AGG | 0.557753 | tig0020780:-10766 | None:intergenic |
| AGATCCCCTTCTCAATCTGA+AGG | 0.559869 | tig0020780:+6651 | Msa1385960:CDS |
| GTGGGTGTTACACCGGTAGC+AGG | 0.560226 | tig0020780:-7099 | None:intergenic |
| ATCGATAATCACGCATATCA+CGG | 0.560428 | tig0020780:+5626 | Msa1385960:CDS |
| CAGTACAATTGGTGGAGCCG+AGG | 0.565358 | tig0020780:+10905 | Msa1385960:intron |
| TATCGATGTCAGACATTGCA+GGG | 0.565666 | tig0020780:-5610 | None:intergenic |
| ATACTTCAGCCAAGTTCCCA+TGG | 0.566342 | tig0020780:+6253 | Msa1385960:intron |
| TGCATTGCTAGCTTCTTCAA+CGG | 0.568490 | tig0020780:-9071 | None:intergenic |
| TCTAGATCTAGATTCTCTCC+TGG | 0.569140 | tig0020780:-6619 | None:intergenic |
| ACAGAAAATAGCGTTGGAAG+TGG | 0.570517 | tig0020780:+12423 | Msa1385960:intron |
| AGTTAATTGTTCAGTAGTGA+CGG | 0.571985 | tig0020780:-12723 | None:intergenic |
| TTAAACATAAAACTTTGGTG+GGG | 0.573434 | tig0020780:-12486 | None:intergenic |
| CATATTTATCATCTCTGTGA+CGG | 0.575013 | tig0020780:-6345 | None:intergenic |
| TGCACATTCTAAACCAGAAG+AGG | 0.576168 | tig0020780:+12280 | Msa1385960:CDS |
| GATAAGTTGAGGTTTGCACT+TGG | 0.579003 | tig0020780:-10755 | None:intergenic |
| TATCATCTCTGTGACGGTCA+CGG | 0.582333 | tig0020780:-6339 | None:intergenic |
| ACGAGGATGAGAAGGAGAGA+TGG | 0.587416 | tig0020780:+6292 | Msa1385960:CDS |
| AGTACAATTGGTGGAGCCGA+GGG | 0.589688 | tig0020780:+10906 | Msa1385960:intron |
| GTGAATGCATGAACACATCA+AGG | 0.590146 | tig0020780:-14016 | None:intergenic |
| AAGAAATATTGGAAGACATG+CGG | 0.592315 | tig0020780:+12762 | Msa1385960:CDS |
| GTGTACCCTTCAGATTGAGA+AGG | 0.592863 | tig0020780:-6657 | None:intergenic |
| GTCCAAACCTATCATAATCA+CGG | 0.596726 | tig0020780:-6417 | None:intergenic |
| AGAGGATAACATCTTTGCAC+GGG | 0.597699 | tig0020780:+12298 | Msa1385960:CDS |
| CAACCAACAGAAAATAGCGT+TGG | 0.604245 | tig0020780:+12417 | Msa1385960:intron |
| GCTCTCATGACCAGATCCAT+GGG | 0.605203 | tig0020780:-6269 | None:intergenic |
| ACTATATCAAAACTTCGAAG+AGG | 0.605870 | tig0020780:-11154 | None:intergenic |
| AAGAGGATAACATCTTTGCA+CGG | 0.608247 | tig0020780:+12297 | Msa1385960:CDS |
| CTAGAACTGCAGCTAATGAA+GGG | 0.610910 | tig0020780:-10721 | None:intergenic |
| AAAGATGCGATCAAGTCCCT+CGG | 0.611237 | tig0020780:-10922 | None:intergenic |
| CATGCTCGGCGAGTGTACGT+TGG | 0.614673 | tig0020780:+8008 | Msa1385960:CDS |
| TGAAACAGTGGGTGTTACAC+CGG | 0.617145 | tig0020780:-7106 | None:intergenic |
| TGAAGAAGCTAGCAATGCAA+TGG | 0.621824 | tig0020780:+9075 | Msa1385960:CDS |
| TCTAAATGGTAGGAAATTTG+GGG | 0.622587 | tig0020780:+13790 | Msa1385960:CDS |
| CAAAAGGAAGCACCTTGTCG+GGG | 0.624226 | tig0020780:-5658 | None:intergenic |
| ACCTGCTCGTTAGCAAAAGG+AGG | 0.626548 | tig0020780:-8038 | None:intergenic |
| CTCACCATATGGGATATCGC+AGG | 0.633429 | tig0020780:+7756 | Msa1385960:CDS |
| AATGAAGGGTTATAGTCAGT+AGG | 0.644328 | tig0020780:-10707 | None:intergenic |
| GGTTTGGATTCAGAAATGGT+TGG | 0.645207 | tig0020780:+5453 | None:intergenic |
| CAGACATTGCAGGGAAAGCG+AGG | 0.648161 | tig0020780:-5601 | None:intergenic |
| GAGAATCTAGATCTAGATCA+CGG | 0.649000 | tig0020780:+6625 | Msa1385960:CDS |
| TGGGTACAAACCTGAAACAG+TGG | 0.649496 | tig0020780:-7118 | None:intergenic |
| GTGTTGCTGTGAGAGTTCGT+AGG | 0.651360 | tig0020780:+10684 | Msa1385960:CDS |
| GGTGTTACACCGGTAGCAGG+TGG | 0.655650 | tig0020780:-7096 | None:intergenic |
| GTAATGCAGGGCAAATGCTG+GGG | 0.655663 | tig0020780:+7698 | Msa1385960:intron |
| ATGATCGTGACAGAGATACA+AGG | 0.655782 | tig0020780:+6568 | Msa1385960:CDS |
| GATCCCCTTCTCAATCTGAA+GGG | 0.656525 | tig0020780:+6652 | Msa1385960:CDS |
| GCTGTCTACAGGAATTGGAA+AGG | 0.661551 | tig0020780:+13458 | Msa1385960:CDS |
| TGGTGCCATGTCAAAACCAG+AGG | 0.669121 | tig0020780:-7076 | None:intergenic |
| GACAGTTATAATCGGCAACG+TGG | 0.674875 | tig0020780:+6394 | Msa1385960:CDS |
| GGGTACAAACCTGAAACAGT+GGG | 0.675303 | tig0020780:-7117 | None:intergenic |
| AAAAGGAAGCACCTTGTCGG+GGG | 0.688425 | tig0020780:-5657 | None:intergenic |
| GATCTGGTCATGAGAGCACG+AGG | 0.693623 | tig0020780:+6275 | Msa1385960:CDS |
| CATCTCTGTGACGGTCACGG+TGG | 0.695589 | tig0020780:-6336 | None:intergenic |
| CAAGTCATGATTGCTATTGG+GGG | 0.700812 | tig0020780:+8669 | Msa1385960:CDS |
| GTACCCTTCAGATTGAGAAG+GGG | 0.702717 | tig0020780:-6655 | None:intergenic |
| CTAAATGGTAGGAAATTTGG+GGG | 0.702819 | tig0020780:+13791 | Msa1385960:CDS |
| AGGGATAACAACATTCACCA+AGG | 0.737659 | tig0020780:-13415 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAAAAAAAAAATGTAA+CGG | - | tig0020780:6986-7005 | None:intergenic | 10.0% |
| !!! | AAATATTTTAGAACTTAAAT+GGG | - | tig0020780:8083-8102 | None:intergenic | 10.0% |
| !!! | AAAATATTTTAGAACTTAAA+TGG | - | tig0020780:8084-8103 | None:intergenic | 10.0% |
| !! | TAAATTAAAAAGGATTATAT+AGG | + | tig0020780:8855-8874 | Msa1385960:intron | 10.0% |
| !! | TTATGACAAATTAAAATTAA+TGG | + | tig0020780:9288-9307 | Msa1385960:intron | 10.0% |
| !!! | TTTATTTTAAGAATAAGAAT+AGG | + | tig0020780:9378-9397 | Msa1385960:intron | 10.0% |
| !!! | AAAAATCCTTTTTTTGTTTT+AGG | + | tig0020780:5745-5764 | Msa1385960:intron | 15.0% |
| !! | AACATAATTATGCTAATAAT+TGG | + | tig0020780:5878-5897 | Msa1385960:intron | 15.0% |
| !!! | TAAAACAAATATTGGTAATT+TGG | - | tig0020780:6752-6771 | None:intergenic | 15.0% |
| !! | AGTAAAAAAAAAAATGTAAC+GGG | - | tig0020780:6985-7004 | None:intergenic | 15.0% |
| !! | ATTCAATCATACTTAATATT+AGG | + | tig0020780:7524-7543 | Msa1385960:intron | 15.0% |
| !! | ATGATATATTTACTTTCATT+TGG | + | tig0020780:7548-7567 | Msa1385960:intron | 15.0% |
| !! | TGATATATTTACTTTCATTT+GGG | + | tig0020780:7549-7568 | Msa1385960:intron | 15.0% |
| !! | ATGAATTTATTACATAGAAT+TGG | - | tig0020780:8140-8159 | None:intergenic | 15.0% |
| !! | AATATAGCCTAATTTATTAA+TGG | - | tig0020780:8553-8572 | None:intergenic | 15.0% |
| !!! | CTTGCAATTTTTTTTTTTTT+GGG | + | tig0020780:11295-11314 | Msa1385960:intron | 15.0% |
| !!! | TTGCAATTTTTTTTTTTTTG+GGG | + | tig0020780:11296-11315 | Msa1385960:intron | 15.0% |
| !!! | TTTCTTTCAAATTTATTTTC+TGG | + | tig0020780:11360-11379 | Msa1385960:intron | 15.0% |
| !! | AAATAATTGGAAATAAAGAT+AGG | - | tig0020780:11581-11600 | None:intergenic | 15.0% |
| !! | AATAATTGAGTAATAATGAA+TGG | - | tig0020780:12388-12407 | None:intergenic | 15.0% |
| !! | CATTATATATGTAATAAACT+TGG | - | tig0020780:13966-13985 | None:intergenic | 15.0% |
| !!! | TTTAACTTGAAGTTAAAAAG+TGG | - | tig0020780:6015-6034 | None:intergenic | 20.0% |
| !!! | TATACTTGGATTATTTGTTT+TGG | + | tig0020780:6186-6205 | Msa1385960:intron | 20.0% |
| !!! | GATAAATATGAAGGTTTTAA+AGG | + | tig0020780:6358-6377 | Msa1385960:CDS | 20.0% |
| !! | ATACTATACAATGTATGAAA+TGG | - | tig0020780:6524-6543 | None:intergenic | 20.0% |
| !! | TACGAAAGTAAAACAAATAT+TGG | - | tig0020780:6760-6779 | None:intergenic | 20.0% |
| !! | TTCTTCTATGAAAAAAAAAC+TGG | + | tig0020780:6939-6958 | Msa1385960:intron | 20.0% |
| !! | TATGAAAAAAAAACTGGAAT+AGG | + | tig0020780:6945-6964 | Msa1385960:intron | 20.0% |
| !! | ATGAAAAAAAAACTGGAATA+GGG | + | tig0020780:6946-6965 | Msa1385960:intron | 20.0% |
| !! | AATTAAAAATTGTACTTGCA+TGG | - | tig0020780:7011-7030 | None:intergenic | 20.0% |
| !! | GTGTTAATTTATGCATTTAT+AGG | + | tig0020780:7932-7951 | Msa1385960:intron | 20.0% |
| !!! | TCTTTGTTTTTTGTTCTAAA+AGG | + | tig0020780:7977-7996 | Msa1385960:intron | 20.0% |
| !! | AGATTTAAGAATCATAGTTA+TGG | + | tig0020780:8217-8236 | Msa1385960:intron | 20.0% |
| !! | AACAATTACATTGTGTTAAT+TGG | - | tig0020780:8576-8595 | None:intergenic | 20.0% |
| !! | TCTAATATCAAAACTTATGA+TGG | - | tig0020780:9150-9169 | None:intergenic | 20.0% |
| !! | TTCTTAAAATAAAACAGTGA+AGG | - | tig0020780:9371-9390 | None:intergenic | 20.0% |
| !!! | CGAGTTTTAATTATGTAATT+TGG | - | tig0020780:9674-9693 | None:intergenic | 20.0% |
| !!! | ATTTTTCTCATTAAATGAGA+GGG | - | tig0020780:10000-10019 | None:intergenic | 20.0% |
| !! | ACTTTACTTATCAAATTTCA+AGG | - | tig0020780:10233-10252 | None:intergenic | 20.0% |
| !!! | TCTTCCTTATTTGAAATATT+TGG | + | tig0020780:10408-10427 | Msa1385960:intron | 20.0% |
| !!! | CTTCCTTATTTGAAATATTT+GGG | + | tig0020780:10409-10428 | Msa1385960:intron | 20.0% |
| !!! | TTCCTTATTTGAAATATTTG+GGG | + | tig0020780:10410-10429 | Msa1385960:intron | 20.0% |
| !! | ATTGATAAGTCAAATTGTAT+GGG | - | tig0020780:10526-10545 | None:intergenic | 20.0% |
| !! | CCAAAAAAAAAAAAATTGCA+AGG | - | tig0020780:11297-11316 | None:intergenic | 20.0% |
| !!! | CCTTGCAATTTTTTTTTTTT+TGG | + | tig0020780:11294-11313 | Msa1385960:intron | 20.0% |
| !!! | ATTTTCTGGTTAATCTTTTT+AGG | + | tig0020780:11374-11393 | Msa1385960:intron | 20.0% |
| !! | TATAGATAATCAAAATGCAT+CGG | - | tig0020780:12183-12202 | None:intergenic | 20.0% |
| !! | TGACAAAATGAAAATAAAGA+GGG | - | tig0020780:12622-12641 | None:intergenic | 20.0% |
| !! | TTGACAAAATGAAAATAAAG+AGG | - | tig0020780:12623-12642 | None:intergenic | 20.0% |
| !! | TTATATAGTTAATTCTCTCT+TGG | + | tig0020780:13062-13081 | Msa1385960:intron | 20.0% |
| !! | TATATAGTTAATTCTCTCTT+GGG | + | tig0020780:13063-13082 | Msa1385960:intron | 20.0% |
| !! | GTTGTAAAACAAAAATTTGT+TGG | + | tig0020780:13121-13140 | Msa1385960:intron | 20.0% |
| !! | TTAAAAGTTTCAAATCACTA+TGG | - | tig0020780:13612-13631 | None:intergenic | 20.0% |
| !!! | AGTGATTTGAAACTTTTAAA+TGG | + | tig0020780:13613-13632 | Msa1385960:intron | 20.0% |
| !!! | GTGATTTGAAACTTTTAAAT+GGG | + | tig0020780:13614-13633 | Msa1385960:intron | 20.0% |
| !!! | ATACTATGATATTTTTCTTC+TGG | - | tig0020780:13842-13861 | None:intergenic | 20.0% |
| !! | AGAAGAAAAATATCATAGTA+TGG | + | tig0020780:13841-13860 | Msa1385960:CDS | 20.0% |
| ! | TTTCTATCCATAATCGTATA+CGG | + | tig0020780:5705-5724 | Msa1385960:intron | 25.0% |
| !! | CTTCAAGTTAAAATCAATTC+TGG | + | tig0020780:6023-6042 | Msa1385960:intron | 25.0% |
| ! | ATGTATATTGCTTGTATACT+TGG | + | tig0020780:6172-6191 | Msa1385960:intron | 25.0% |
| ! | AGAAAATCTAATCTGAAAAG+AGG | - | tig0020780:6461-6480 | None:intergenic | 25.0% |
| ! | TTAATATCACACAAGAACAA+TGG | - | tig0020780:6704-6723 | None:intergenic | 25.0% |
| ! | AGCATAAACACTTTAAACTA+AGG | - | tig0020780:7242-7261 | None:intergenic | 25.0% |
| ! | TCAGTAAATCAAACAAATGA+GGG | - | tig0020780:7607-7626 | None:intergenic | 25.0% |
| ! | TTCAGTAAATCAAACAAATG+AGG | - | tig0020780:7608-7627 | None:intergenic | 25.0% |
| ! | TTATTAAGAGTTAGTAATGC+AGG | + | tig0020780:7685-7704 | Msa1385960:intron | 25.0% |
| ! | TATTAAGAGTTAGTAATGCA+GGG | + | tig0020780:7686-7705 | Msa1385960:intron | 25.0% |
| ! | AACTAAAATAGCTGAAAATC+TGG | - | tig0020780:7809-7828 | None:intergenic | 25.0% |
| ! | TAAATTAACACAAACGTATC+AGG | - | tig0020780:7923-7942 | None:intergenic | 25.0% |
| ! | TTGGAGTAATTACTATTAGT+AGG | + | tig0020780:8280-8299 | Msa1385960:intron | 25.0% |
| ! | TGGAGTAATTACTATTAGTA+GGG | + | tig0020780:8281-8300 | Msa1385960:intron | 25.0% |
| ! | AAGAACATAAATAGTACAAC+TGG | - | tig0020780:8421-8440 | None:intergenic | 25.0% |
| !!! | CATGCTTCTTTTTGTTTTTT+GGG | + | tig0020780:8442-8461 | Msa1385960:intron | 25.0% |
| !!! | ATGCTTCTTTTTGTTTTTTG+GGG | + | tig0020780:8443-8462 | Msa1385960:intron | 25.0% |
| ! | TGTATGTATGTATCTATGTA+CGG | + | tig0020780:8939-8958 | Msa1385960:intron | 25.0% |
| ! | TTTAGATGGAATAGTATTTG+AGG | + | tig0020780:9099-9118 | Msa1385960:intron | 25.0% |
| ! | TAAAATGGAAATTCAAGAGA+TGG | - | tig0020780:9220-9239 | None:intergenic | 25.0% |
| ! | CCTTAAGTTATGACTTAAAA+TGG | - | tig0020780:9235-9254 | None:intergenic | 25.0% |
| !!! | CCATTTTAAGTCATAACTTA+AGG | + | tig0020780:9232-9251 | Msa1385960:intron | 25.0% |
| !! | GCTAAAAAGAAATGTAGTTT+TGG | - | tig0020780:9490-9509 | None:intergenic | 25.0% |
| ! | AACTCCTCTATCATATTAAT+GGG | + | tig0020780:9794-9813 | Msa1385960:intron | 25.0% |
| !! | TTTTTCTCATTAAATGAGAG+GGG | - | tig0020780:9999-10018 | None:intergenic | 25.0% |
| !! | CATTTTTCTCATTAAATGAG+AGG | - | tig0020780:10001-10020 | None:intergenic | 25.0% |
| ! | CTCTCATTTAATGAGAAAAA+TGG | + | tig0020780:9999-10018 | Msa1385960:intron | 25.0% |
| ! | AATGAGAAAAATGGTAAATC+AGG | + | tig0020780:10008-10027 | Msa1385960:intron | 25.0% |
| ! | CTGAATTAATTGAAGATTAG+GGG | - | tig0020780:10052-10071 | None:intergenic | 25.0% |
| ! | GCTGAATTAATTGAAGATTA+GGG | - | tig0020780:10053-10072 | None:intergenic | 25.0% |
| !!! | TCAACAGAAATAGAAGTATT+AGG | - | tig0020780:10262-10281 | None:intergenic | 25.0% |
| !!! | CAGTAGTTTTATTTTATCAC+AGG | - | tig0020780:10300-10319 | None:intergenic | 25.0% |
| !! | AAAATCAATGATTTGGAGTT+CGG | - | tig0020780:10389-10408 | None:intergenic | 25.0% |
| ! | AAGGAAGAAAATCAATGATT+TGG | - | tig0020780:10396-10415 | None:intergenic | 25.0% |
| ! | TTGATAAGTCAAATTGTATG+GGG | - | tig0020780:10525-10544 | None:intergenic | 25.0% |
| ! | CATTGATAAGTCAAATTGTA+TGG | - | tig0020780:10527-10546 | None:intergenic | 25.0% |
| !!! | TTTAGTGCTCTAAAACATAT+TGG | - | tig0020780:10635-10654 | None:intergenic | 25.0% |
| ! | AACATGCATATAAACATCAA+AGG | - | tig0020780:10817-10836 | None:intergenic | 25.0% |
| !! | GTTTATATGCATGTTTTACA+TGG | + | tig0020780:10822-10841 | Msa1385960:intron | 25.0% |
| ! | GTAAAGTAAATCAATAAGCA+TGG | - | tig0020780:11083-11102 | None:intergenic | 25.0% |
| ! | ATAGTTAGAGATAAAGAAAC+AGG | + | tig0020780:11172-11191 | Msa1385960:CDS | 25.0% |
| ! | AAAGAAACAGGAAATTCTAA+AGG | + | tig0020780:11184-11203 | Msa1385960:CDS | 25.0% |
| !!! | TTTTTTTTTTTTGGGGCATT+TGG | + | tig0020780:11303-11322 | Msa1385960:intron | 25.0% |
| !! | ATGTTTTATCTCCCATTTTA+AGG | - | tig0020780:11440-11459 | None:intergenic | 25.0% |
| ! | GAAATAAAGATAGGAAGTAA+TGG | - | tig0020780:11572-11591 | None:intergenic | 25.0% |
| ! | CGGAAGTAATAGAAAATAAT+TGG | - | tig0020780:11594-11613 | None:intergenic | 25.0% |
| !! | ATTATTTTCTATTACTTCCG+TGG | + | tig0020780:11594-11613 | Msa1385960:intron | 25.0% |
| ! | CATATTGAAGGAAGAAAAAT+TGG | - | tig0020780:11632-11651 | None:intergenic | 25.0% |
| ! | ACATGATTCATAGAAATAGA+AGG | + | tig0020780:11667-11686 | Msa1385960:intron | 25.0% |
| ! | CATGATTCATAGAAATAGAA+GGG | + | tig0020780:11668-11687 | Msa1385960:intron | 25.0% |
| !!! | CTACTTTTAGAAACCTTAAT+CGG | + | tig0020780:11813-11832 | Msa1385960:intron | 25.0% |
| ! | TTAAGATTAATCAGCAAGAA+GGG | - | tig0020780:11917-11936 | None:intergenic | 25.0% |
| ! | ATTAAGATTAATCAGCAAGA+AGG | - | tig0020780:11918-11937 | None:intergenic | 25.0% |
| ! | TGAATGATGTATGTATCTAA+GGG | - | tig0020780:11942-11961 | None:intergenic | 25.0% |
| ! | ATGAATGATGTATGTATCTA+AGG | - | tig0020780:11943-11962 | None:intergenic | 25.0% |
| ! | TTAGATACATACATCATTCA+TGG | + | tig0020780:11942-11961 | Msa1385960:intron | 25.0% |
| !!! | CTGTTAATTTTGTTTGCTTT+TGG | + | tig0020780:12016-12035 | Msa1385960:intron | 25.0% |
| ! | TTAAACATAAAACTTTGGTG+GGG | - | tig0020780:12489-12508 | None:intergenic | 25.0% |
| ! | GTTAAACATAAAACTTTGGT+GGG | - | tig0020780:12490-12509 | None:intergenic | 25.0% |
| ! | AGTTAAACATAAAACTTTGG+TGG | - | tig0020780:12491-12510 | None:intergenic | 25.0% |
| ! | CTCAGTTAAACATAAAACTT+TGG | - | tig0020780:12494-12513 | None:intergenic | 25.0% |
| !!! | CAAAGTTTTATGTTTAACTG+AGG | + | tig0020780:12492-12511 | Msa1385960:CDS | 25.0% |
| ! | GACAAAATGAAAATAAAGAG+GGG | - | tig0020780:12621-12640 | None:intergenic | 25.0% |
| !! | CATTTTGTCAAAATTTCCTA+TGG | + | tig0020780:12632-12651 | Msa1385960:intron | 25.0% |
| ! | ACTGAACAATTAACTGATAA+TGG | + | tig0020780:12731-12750 | Msa1385960:CDS | 25.0% |
| ! | TGGAGAATATGAAGAAATAT+TGG | + | tig0020780:12751-12770 | Msa1385960:CDS | 25.0% |
| !! | CTCATATATTACATTTTCTC+TGG | + | tig0020780:12870-12889 | Msa1385960:intron | 25.0% |
| ! | TTTGATCGACATTTATAGTT+TGG | + | tig0020780:13004-13023 | Msa1385960:intron | 25.0% |
| !! | TATTTTACTGCAAGATCAAT+TGG | + | tig0020780:13296-13315 | Msa1385960:intron | 25.0% |
| ! | TATAATTTCTTGCACCTTAT+TGG | + | tig0020780:13380-13399 | Msa1385960:intron | 25.0% |
| ! | TAGTTGTTTAATTGTGGTTT+CGG | + | tig0020780:13705-13724 | Msa1385960:intron | 25.0% |
| AACACACGAAGAATCAATTT+AGG | + | tig0020780:5542-5561 | Msa1385960:CDS | 30.0% | |
| ACACACGAAGAATCAATTTA+GGG | + | tig0020780:5543-5562 | Msa1385960:CDS | 30.0% | |
| TAGCTAAACTATTGTGCAAA+AGG | - | tig0020780:5677-5696 | None:intergenic | 30.0% | |
| CAATGGCCTAAAACAAAAAA+AGG | - | tig0020780:5754-5773 | None:intergenic | 30.0% | |
| AACGTAATCAAAGCTAACAA+TGG | - | tig0020780:5771-5790 | None:intergenic | 30.0% | |
| GAATTTAAGTGACTTGATTC+TGG | + | tig0020780:5931-5950 | Msa1385960:intron | 30.0% | |
| CAAGTTAAAATCAATTCTGG+AGG | + | tig0020780:6026-6045 | Msa1385960:intron | 30.0% | |
| CATATTTATCATCTCTGTGA+CGG | - | tig0020780:6348-6367 | None:intergenic | 30.0% | |
| CACAGAGATGATAAATATGA+AGG | + | tig0020780:6349-6368 | Msa1385960:CDS | 30.0% | |
| !!! | TATGAAGGTTTTAAAGGAAG+AGG | + | tig0020780:6364-6383 | Msa1385960:CDS | 30.0% |
| GCAGATATGACAGTTATAAT+CGG | + | tig0020780:6386-6405 | Msa1385960:CDS | 30.0% | |
| ! | GTATAGTATGTTCCTTTTGT+AGG | + | tig0020780:6535-6554 | Msa1385960:intron | 30.0% |
| ATAGTCATTATGCCTACAAA+AGG | - | tig0020780:6550-6569 | None:intergenic | 30.0% | |
| TGTGATATTAACTATCTCCT+CGG | + | tig0020780:6713-6732 | Msa1385960:intron | 30.0% | |
| TTACCAACGCAATTTATAAG+TGG | + | tig0020780:6799-6818 | Msa1385960:intron | 30.0% | |
| ! | CAATTTATAAGTGGACCTTT+TGG | + | tig0020780:6808-6827 | Msa1385960:intron | 30.0% |
| TTACTAGTTAACAAGCCAAA+AGG | - | tig0020780:6826-6845 | None:intergenic | 30.0% | |
| TATGCACTTTATCTGTTAGA+AGG | + | tig0020780:6851-6870 | Msa1385960:intron | 30.0% | |
| GAATCTACAAAAGAGTGAAA+GGG | - | tig0020780:6922-6941 | None:intergenic | 30.0% | |
| AGAATCTACAAAAGAGTGAA+AGG | - | tig0020780:6923-6942 | None:intergenic | 30.0% | |
| ! | ATGTAGAGCACTAAATTAAG+TGG | - | tig0020780:7145-7164 | None:intergenic | 30.0% |
| AATTTAGTGCTCTACATGTA+TGG | + | tig0020780:7148-7167 | Msa1385960:intron | 30.0% | |
| ATTTAGTGCTCTACATGTAT+GGG | + | tig0020780:7149-7168 | Msa1385960:intron | 30.0% | |
| TGCATAATACAGACTGAATT+GGG | - | tig0020780:7216-7235 | None:intergenic | 30.0% | |
| ATGCATAATACAGACTGAAT+TGG | - | tig0020780:7217-7236 | None:intergenic | 30.0% | |
| !!! | TTGTGTCTGGCTTATTTTTA+TGG | + | tig0020780:7347-7366 | Msa1385960:intron | 30.0% |
| !!! | TCTGGCTTATTTTTATGGTT+GGG | + | tig0020780:7352-7371 | Msa1385960:intron | 30.0% |
| ! | ATATGGTGAGAAATTTTGTG+TGG | - | tig0020780:7746-7765 | None:intergenic | 30.0% |
| ACACAAAATTTCTCACCATA+TGG | + | tig0020780:7745-7764 | Msa1385960:CDS | 30.0% | |
| CACAAAATTTCTCACCATAT+GGG | + | tig0020780:7746-7765 | Msa1385960:CDS | 30.0% | |
| TAAAATAGCTGAAAATCTGG+TGG | - | tig0020780:7806-7825 | None:intergenic | 30.0% | |
| TGATTTCATTTGTCACAGAT+TGG | + | tig0020780:7845-7864 | Msa1385960:intron | 30.0% | |
| !!! | TTTTGTTCTAAAAGGCTACA+AGG | + | tig0020780:7985-8004 | Msa1385960:intron | 30.0% |
| AATCATAGTTATGGCAACTT+GGG | + | tig0020780:8226-8245 | Msa1385960:intron | 30.0% | |
| TACTATTAGTAGGGTTATAC+TGG | + | tig0020780:8290-8309 | Msa1385960:intron | 30.0% | |
| CATCTATAATGAATGCTATC+TGG | + | tig0020780:8314-8333 | Msa1385960:intron | 30.0% | |
| ATAGTACAACTGGTACATAA+AGG | - | tig0020780:8411-8430 | None:intergenic | 30.0% | |
| CCAAAAAACAAAAAGAAGCA+TGG | - | tig0020780:8444-8463 | None:intergenic | 30.0% | |
| !!! | CCATGCTTCTTTTTGTTTTT+TGG | + | tig0020780:8441-8460 | Msa1385960:intron | 30.0% |
| GCCTGTTCCATTAATAAATT+AGG | + | tig0020780:8543-8562 | Msa1385960:intron | 30.0% | |
| GCCTAATTTATTAATGGAAC+AGG | - | tig0020780:8547-8566 | None:intergenic | 30.0% | |
| !! | AATTGTTTCCCTTTGCTTTT+CGG | + | tig0020780:8589-8608 | Msa1385960:intron | 30.0% |
| ! | AATCGATAACTTGTGAAAGA+AGG | + | tig0020780:8778-8797 | Msa1385960:intron | 30.0% |
| TTAAGTCATAACTTAAGGCT+TGG | + | tig0020780:9237-9256 | Msa1385960:intron | 30.0% | |
| TAAGTCATAACTTAAGGCTT+GGG | + | tig0020780:9238-9257 | Msa1385960:intron | 30.0% | |
| AGGAAGTTTGTGGATTTATT+GGG | - | tig0020780:9351-9370 | None:intergenic | 30.0% | |
| AAGGAAGTTTGTGGATTTAT+TGG | - | tig0020780:9352-9371 | None:intergenic | 30.0% | |
| !! | AAAAGAAGAGTGTTGTTCAT+TGG | - | tig0020780:9404-9423 | None:intergenic | 30.0% |
| TTGGTCAAATCATTTCTTGA+GGG | - | tig0020780:9447-9466 | None:intergenic | 30.0% | |
| TAAACAACAATTCCTTACCT+TGG | - | tig0020780:9466-9485 | None:intergenic | 30.0% | |
| GACATTCTTATGGTAGAAAT+TGG | - | tig0020780:9569-9588 | None:intergenic | 30.0% | |
| GGTTTAATGTGACATTCTTA+TGG | - | tig0020780:9579-9598 | None:intergenic | 30.0% | |
| ACCAAAACAAACCTCAAATA+TGG | + | tig0020780:9596-9615 | Msa1385960:intron | 30.0% | |
| CAACTCCTCTATCATATTAA+TGG | + | tig0020780:9793-9812 | Msa1385960:intron | 30.0% | |
| ATGTTGGATGTAAAGAAGAA+TGG | - | tig0020780:9878-9897 | None:intergenic | 30.0% | |
| ! | TTTTCTCATTAAATGAGAGG+GGG | - | tig0020780:9998-10017 | None:intergenic | 30.0% |
| AATCAGGATAGTTACATTCA+TGG | + | tig0020780:10024-10043 | Msa1385960:intron | 30.0% | |
| GGCTGAATTAATTGAAGATT+AGG | - | tig0020780:10054-10073 | None:intergenic | 30.0% | |
| GAAGAATTCATTCTGTGAAT+AGG | - | tig0020780:10108-10127 | None:intergenic | 30.0% | |
| ATATGTGTTGTAAGAAAAGG+GGG | - | tig0020780:10210-10229 | None:intergenic | 30.0% | |
| GATATGTGTTGTAAGAAAAG+GGG | - | tig0020780:10211-10230 | None:intergenic | 30.0% | |
| GGATATGTGTTGTAAGAAAA+GGG | - | tig0020780:10212-10231 | None:intergenic | 30.0% | |
| AGGATATGTGTTGTAAGAAA+AGG | - | tig0020780:10213-10232 | None:intergenic | 30.0% | |
| GATAAAATAAAACTACTGCG+TGG | + | tig0020780:10302-10321 | Msa1385960:intron | 30.0% | |
| CACCCCAAATATTTCAAATA+AGG | - | tig0020780:10415-10434 | None:intergenic | 30.0% | |
| AAAATGGGGTTCAAATTGAT+TGG | - | tig0020780:10500-10519 | None:intergenic | 30.0% | |
| AAATTGTATGGGGGAAAAAT+GGG | - | tig0020780:10515-10534 | None:intergenic | 30.0% | |
| TGATAAGTCAAATTGTATGG+GGG | - | tig0020780:10524-10543 | None:intergenic | 30.0% | |
| TTGCTTTCTGCATATTGTTT+CGG | + | tig0020780:10563-10582 | Msa1385960:intron | 30.0% | |
| ! | TGTTTTTCTTGTGATATCTC+AGG | + | tig0020780:10661-10680 | Msa1385960:intron | 30.0% |
| ! | GTTTTTCTTGTGATATCTCA+GGG | + | tig0020780:10662-10681 | Msa1385960:intron | 30.0% |
| CATATAAACATCAAAGGATG+TGG | - | tig0020780:10811-10830 | None:intergenic | 30.0% | |
| ! | ACATGGATTTTTCATAATGC+TGG | + | tig0020780:10839-10858 | Msa1385960:intron | 30.0% |
| TGTACTTCAGTAAAGTAGTA+TGG | - | tig0020780:10960-10979 | None:intergenic | 30.0% | |
| GTTTACTCTTCTATGTATTC+TGG | + | tig0020780:11037-11056 | Msa1385960:intron | 30.0% | |
| ACTATATCAAAACTTCGAAG+AGG | - | tig0020780:11157-11176 | None:intergenic | 30.0% | |
| ! | ACAGGAAATTCTAAAGGATA+TGG | + | tig0020780:11190-11209 | Msa1385960:CDS | 30.0% |
| ! | ACAAAGCTTTATACTCTGTT+AGG | - | tig0020780:11335-11354 | None:intergenic | 30.0% |
| ! | GAGATAAAACATTGACTGTA+AGG | + | tig0020780:11448-11467 | Msa1385960:CDS | 30.0% |
| TTTCTATGAATCATGTTCTG+TGG | - | tig0020780:11663-11682 | None:intergenic | 30.0% | |
| AGGGAGAAATTTAAATTGAG+AGG | + | tig0020780:11687-11706 | Msa1385960:intron | 30.0% | |
| !! | CAGTAATATCCCTTTTAAGT+TGG | + | tig0020780:11762-11781 | Msa1385960:intron | 30.0% |
| ACTAATATTGAAGCTACTAG+AGG | - | tig0020780:11792-11811 | None:intergenic | 30.0% | |
| TAAGATTAATCAGCAAGAAG+GGG | - | tig0020780:11916-11935 | None:intergenic | 30.0% | |
| ATTCATTGTGATGTACTTGT+CGG | + | tig0020780:12253-12272 | Msa1385960:intron | 30.0% | |
| AAATGAAAATAAAGAGGGGA+AGG | - | tig0020780:12617-12636 | None:intergenic | 30.0% | |
| ATCAAATTGTTAACAGCCAT+AGG | - | tig0020780:12651-12670 | None:intergenic | 30.0% | |
| AGTTAATTGTTCAGTAGTGA+CGG | - | tig0020780:12726-12745 | None:intergenic | 30.0% | |
| AAGAAATATTGGAAGACATG+CGG | + | tig0020780:12762-12781 | Msa1385960:CDS | 30.0% | |
| CAGAAAATGGCAAAGTAATA+TGG | - | tig0020780:12830-12849 | None:intergenic | 30.0% | |
| ! | TTACATTTTCTCTGGTTAAG+TGG | + | tig0020780:12878-12897 | Msa1385960:intron | 30.0% |
| ! | TACATTTTCTCTGGTTAAGT+GGG | + | tig0020780:12879-12898 | Msa1385960:intron | 30.0% |
| ! | CAATATCTCATCCAAGTTTT+TGG | + | tig0020780:12936-12955 | Msa1385960:intron | 30.0% |
| ! | AGCATAGTTTTCCAAAAACT+TGG | - | tig0020780:12950-12969 | None:intergenic | 30.0% |
| TCTAACAAATAAAGTATGCG+AGG | + | tig0020780:13664-13683 | Msa1385960:intron | 30.0% | |
| CACAATTAAACAACTACGTT+TGG | - | tig0020780:13701-13720 | None:intergenic | 30.0% | |
| CAAACGTAGTTGTTTAATTG+TGG | + | tig0020780:13699-13718 | Msa1385960:intron | 30.0% | |
| ! | CAAAAAATGCTCTAAATGGT+AGG | + | tig0020780:13780-13799 | Msa1385960:CDS | 30.0% |
| CTCTAAATGGTAGGAAATTT+GGG | + | tig0020780:13789-13808 | Msa1385960:CDS | 30.0% | |
| TCTAAATGGTAGGAAATTTG+GGG | + | tig0020780:13790-13809 | Msa1385960:CDS | 30.0% | |
| ! | TATGATTTGTAACCGATTGT+AGG | + | tig0020780:13866-13885 | Msa1385960:exon | 30.0% |
| ! | ATGATTTGTAACCGATTGTA+GGG | + | tig0020780:13867-13886 | Msa1385960:exon | 30.0% |
| ATTATATCTCTCCCTACAAT+CGG | - | tig0020780:13881-13900 | None:intergenic | 30.0% | |
| AAAACTTGAGTGACAAAAAG+TGG | - | tig0020780:13926-13945 | None:intergenic | 30.0% | |
| CACTGGAAAATAACGTTTAT+TGG | + | tig0020780:14036-14055 | Msa1385960:three_prime_UTR | 30.0% | |
| ATCGATAATCACGCATATCA+CGG | + | tig0020780:5626-5645 | Msa1385960:CDS | 35.0% | |
| TCGAAAACCGTATACGATTA+TGG | - | tig0020780:5715-5734 | None:intergenic | 35.0% | |
| GCTAATAATTGGTGTGTGTT+TGG | + | tig0020780:5889-5908 | Msa1385960:intron | 35.0% | |
| !! | CACTCCTCTAGAATAAATGT+CGG | + | tig0020780:6096-6115 | Msa1385960:intron | 35.0% |
| GGTTAATCTCTTGATAGAGT+TGG | + | tig0020780:6207-6226 | Msa1385960:intron | 35.0% | |
| GTCCAAACCTATCATAATCA+CGG | - | tig0020780:6420-6439 | None:intergenic | 35.0% | |
| AGAGATACAAGGAACAGATA+TGG | + | tig0020780:6579-6598 | Msa1385960:CDS | 35.0% | |
| GAGAATCTAGATCTAGATCA+CGG | + | tig0020780:6625-6644 | Msa1385960:CDS | 35.0% | |
| ! | ATAAATTGCGTTGGTAAGTG+AGG | - | tig0020780:6796-6815 | None:intergenic | 35.0% |
| !! | TCCTTTTGCTGTAGACAAAT+CGG | - | tig0020780:7056-7075 | None:intergenic | 35.0% |
| GAGCACTAAATTAAGTGGTT+GGG | - | tig0020780:7140-7159 | None:intergenic | 35.0% | |
| ! | AGAGCACTAAATTAAGTGGT+TGG | - | tig0020780:7141-7160 | None:intergenic | 35.0% |
| CTAGCATACGAAATTCAATG+AGG | - | tig0020780:7177-7196 | None:intergenic | 35.0% | |
| GCATAATACAGACTGAATTG+GGG | - | tig0020780:7215-7234 | None:intergenic | 35.0% | |
| !!! | GTCTGGCTTATTTTTATGGT+TGG | + | tig0020780:7351-7370 | Msa1385960:intron | 35.0% |
| ! | ATTTTTATGGTTGGGTGAGA+AGG | + | tig0020780:7360-7379 | Msa1385960:intron | 35.0% |
| ACACCCTGTATCATATTCAA+TGG | + | tig0020780:7424-7443 | Msa1385960:intron | 35.0% | |
| CAGCCATTGAATATGATACA+GGG | - | tig0020780:7430-7449 | None:intergenic | 35.0% | |
| GAATCATAGTTATGGCAACT+TGG | + | tig0020780:8225-8244 | Msa1385960:intron | 35.0% | |
| ATCATAGTTATGGCAACTTG+GGG | + | tig0020780:8227-8246 | Msa1385960:intron | 35.0% | |
| ATTGCAGCTTGCACTTAATT+TGG | + | tig0020780:8261-8280 | Msa1385960:intron | 35.0% | |
| ! | TATCTGGAATTGATCTTGTC+AGG | + | tig0020780:8330-8349 | Msa1385960:intron | 35.0% |
| ! | ATCTGGAATTGATCTTGTCA+GGG | + | tig0020780:8331-8350 | Msa1385960:intron | 35.0% |
| !!! | CTTCTTTTTGTTTTTTGGGG+CGG | + | tig0020780:8446-8465 | Msa1385960:intron | 35.0% |
| !!! | TTCTTTTTGTTTTTTGGGGC+GGG | + | tig0020780:8447-8466 | Msa1385960:intron | 35.0% |
| CAACAATTCCGAAAAGCAAA+GGG | - | tig0020780:8600-8619 | None:intergenic | 35.0% | |
| TCAACAATTCCGAAAAGCAA+AGG | - | tig0020780:8601-8620 | None:intergenic | 35.0% | |
| CACAACTACTGGTAATTCAA+AGG | - | tig0020780:8821-8840 | None:intergenic | 35.0% | |
| TTCAAGATTTCCTGACTTAC+AGG | + | tig0020780:8986-9005 | Msa1385960:intron | 35.0% | |
| TGAGAAGAAATTTGCGTTTG+TGG | + | tig0020780:9039-9058 | Msa1385960:CDS | 35.0% | |
| AAAACAGTGAAGGAAGTTTG+TGG | - | tig0020780:9361-9380 | None:intergenic | 35.0% | |
| CTTGGTCAAATCATTTCTTG+AGG | - | tig0020780:9448-9467 | None:intergenic | 35.0% | |
| CTCAAGAAATGATTTGACCA+AGG | + | tig0020780:9446-9465 | Msa1385960:intron | 35.0% | |
| GAAATGATTTGACCAAGGTA+AGG | + | tig0020780:9451-9470 | Msa1385960:intron | 35.0% | |
| ATCACTGTTACATGTGAAGA+TGG | - | tig0020780:9542-9561 | None:intergenic | 35.0% | |
| TTCTTATGGTAGAAATTGGC+AGG | - | tig0020780:9565-9584 | None:intergenic | 35.0% | |
| !! | GCCATATTTGAGGTTTGTTT+TGG | - | tig0020780:9600-9619 | None:intergenic | 35.0% |
| TCTGTTCTCAATGTTGTCTT+TGG | + | tig0020780:9696-9715 | Msa1385960:intron | 35.0% | |
| CTGTTCTCAATGTTGTCTTT+GGG | + | tig0020780:9697-9716 | Msa1385960:intron | 35.0% | |
| !! | GTTGTCTTTGGGATATCTTT+AGG | + | tig0020780:9708-9727 | Msa1385960:intron | 35.0% |
| AGTTGTTGAATGAGTTGCAT+GGG | - | tig0020780:9778-9797 | None:intergenic | 35.0% | |
| TGCACCCATTAATATGATAG+AGG | - | tig0020780:9801-9820 | None:intergenic | 35.0% | |
| ! | TCATATTAATGGGTGCATGT+TGG | + | tig0020780:9804-9823 | Msa1385960:intron | 35.0% |
| ! | CATATTAATGGGTGCATGTT+GGG | + | tig0020780:9805-9824 | Msa1385960:intron | 35.0% |
| !! | TGGGAATTGTTGCTTTATTG+AGG | + | tig0020780:9824-9843 | Msa1385960:intron | 35.0% |
| !! | GGGAATTGTTGCTTTATTGA+GGG | + | tig0020780:9825-9844 | Msa1385960:intron | 35.0% |
| TTGGATGTAAAGAAGAATGG+AGG | - | tig0020780:9875-9894 | None:intergenic | 35.0% | |
| GCATGTGTCGAATAAATGTA+AGG | - | tig0020780:9951-9970 | None:intergenic | 35.0% | |
| !! | CATGCTCGAAAGTATTTGAA+TGG | + | tig0020780:9966-9985 | Msa1385960:intron | 35.0% |
| GAATTCATTCTGTGAATAGG+AGG | - | tig0020780:10105-10124 | None:intergenic | 35.0% | |
| TTCATCTTCTCTCTATGCAA+AGG | + | tig0020780:10161-10180 | Msa1385960:intron | 35.0% | |
| TCATCTTCTCTCTATGCAAA+GGG | + | tig0020780:10162-10181 | Msa1385960:intron | 35.0% | |
| GTTCAAATTGATTGGATTCG+CGG | - | tig0020780:10492-10511 | None:intergenic | 35.0% | |
| AATTGTATGGGGGAAAAATG+GGG | - | tig0020780:10514-10533 | None:intergenic | 35.0% | |
| CAAATTGTATGGGGGAAAAA+TGG | - | tig0020780:10516-10535 | None:intergenic | 35.0% | |
| GACTTATCAATGTAATGAGC+TGG | + | tig0020780:10535-10554 | Msa1385960:intron | 35.0% | |
| ! | ACTCTGGGCTATTTCATTAA+TGG | - | tig0020780:10604-10623 | None:intergenic | 35.0% |
| !! | TGCTCTAAAACATATTGGAC+GGG | - | tig0020780:10630-10649 | None:intergenic | 35.0% |
| !! | GTGCTCTAAAACATATTGGA+CGG | - | tig0020780:10631-10650 | None:intergenic | 35.0% |
| AATGAAGGGTTATAGTCAGT+AGG | - | tig0020780:10710-10729 | None:intergenic | 35.0% | |
| ! | AGAGAATTGCTTCAAGCTTT+TGG | + | tig0020780:10984-11003 | Msa1385960:CDS | 35.0% |
| ! | GAGAATTGCTTCAAGCTTTT+GGG | + | tig0020780:10985-11004 | Msa1385960:CDS | 35.0% |
| !! | AGCTTTTGGGTATGATATCA+TGG | + | tig0020780:10998-11017 | Msa1385960:intron | 35.0% |
| TATCACAACAGAAATGTGTC+AGG | - | tig0020780:11115-11134 | None:intergenic | 35.0% | |
| ATATGGTTTCTGCATCTATC+AGG | + | tig0020780:11207-11226 | Msa1385960:CDS | 35.0% | |
| AGATAGACTCTTCCATAGAA+AGG | - | tig0020780:11493-11512 | None:intergenic | 35.0% | |
| GTGGCAAATTAGCATATTGA+AGG | - | tig0020780:11644-11663 | None:intergenic | 35.0% | |
| AGAGGTTTGCCAACTTAAAA+GGG | - | tig0020780:11774-11793 | None:intergenic | 35.0% | |
| TAGAGGTTTGCCAACTTAAA+AGG | - | tig0020780:11775-11794 | None:intergenic | 35.0% | |
| ! | CTTGAAGAGAATACCGATTA+AGG | - | tig0020780:11829-11848 | None:intergenic | 35.0% |
| AGCTTGACAGCATAATAGAA+TGG | - | tig0020780:11975-11994 | None:intergenic | 35.0% | |
| ATCAATGACACACAAACAGA+GGG | - | tig0020780:12069-12088 | None:intergenic | 35.0% | |
| TATCAATGACACACAAACAG+AGG | - | tig0020780:12070-12089 | None:intergenic | 35.0% | |
| GGGGTTAATAACGGTTTATA+TGG | + | tig0020780:12116-12135 | Msa1385960:intron | 35.0% | |
| TTCATTGTGATGTACTTGTC+GGG | + | tig0020780:12254-12273 | Msa1385960:intron | 35.0% | |
| AAGAGGATAACATCTTTGCA+CGG | + | tig0020780:12297-12316 | Msa1385960:CDS | 35.0% | |
| ! | CTCTACCTTATTTCCTTTGA+AGG | + | tig0020780:12700-12719 | Msa1385960:intron | 35.0% |
| AGAAATATTGGAAGACATGC+GGG | + | tig0020780:12763-12782 | Msa1385960:CDS | 35.0% | |
| CAACATGCATACCAAATTTG+CGG | - | tig0020780:12796-12815 | None:intergenic | 35.0% | |
| GCACAACTTTAAGCAGAAAA+TGG | - | tig0020780:12843-12862 | None:intergenic | 35.0% | |
| !! | TTTTTGGAAAACTATGCTCG+AGG | + | tig0020780:12952-12971 | Msa1385960:intron | 35.0% |
| CTCTCTTGGGACATATAAAA+TGG | + | tig0020780:13076-13095 | Msa1385960:intron | 35.0% | |
| AGTGTCTTAGACCATTTCAA+CGG | + | tig0020780:13161-13180 | Msa1385960:intron | 35.0% | |
| CCTATAACACCTATAATGAC+TGG | - | tig0020780:13242-13261 | None:intergenic | 35.0% | |
| ! | CCAGTCATTATAGGTGTTAT+AGG | + | tig0020780:13239-13258 | Msa1385960:intron | 35.0% |
| GTTTCATACGCAAACTAAAG+TGG | - | tig0020780:13541-13560 | None:intergenic | 35.0% | |
| ! | GCTGCAAAAAATGCTCTAAA+TGG | + | tig0020780:13776-13795 | Msa1385960:CDS | 35.0% |
| ! | GCTCTAAATGGTAGGAAATT+TGG | + | tig0020780:13788-13807 | Msa1385960:CDS | 35.0% |
| CTAAATGGTAGGAAATTTGG+GGG | + | tig0020780:13791-13810 | Msa1385960:CDS | 35.0% | |
| TATCGATGTCAGACATTGCA+GGG | - | tig0020780:5613-5632 | None:intergenic | 40.0% | |
| TTATCGATGTCAGACATTGC+AGG | - | tig0020780:5614-5633 | None:intergenic | 40.0% | |
| ! | CGACATTTATTCTAGAGGAG+TGG | - | tig0020780:6098-6117 | None:intergenic | 40.0% |
| AGAGCCGACATTTATTCTAG+AGG | - | tig0020780:6103-6122 | None:intergenic | 40.0% | |
| ! | GCAAATTGCAGTTCCACTTT+TGG | - | tig0020780:6127-6146 | None:intergenic | 40.0% |
| ATGATCGTGACAGAGATACA+AGG | + | tig0020780:6568-6587 | Msa1385960:CDS | 40.0% | |
| TCTAGATCTAGATTCTCTCC+TGG | - | tig0020780:6622-6641 | None:intergenic | 40.0% | |
| TGTACCCTTCAGATTGAGAA+GGG | - | tig0020780:6659-6678 | None:intergenic | 40.0% | |
| ! | TTGGTAATTATCGAAGACCG+AGG | - | tig0020780:6733-6752 | None:intergenic | 40.0% |
| GGTCCACTTATAAATTGCGT+TGG | - | tig0020780:6805-6824 | None:intergenic | 40.0% | |
| ! | TCCGATTTGTCTACAGCAAA+AGG | + | tig0020780:7052-7071 | Msa1385960:intron | 40.0% |
| AATACAGACTGAATTGGGGT+GGG | - | tig0020780:7211-7230 | None:intergenic | 40.0% | |
| TAATACAGACTGAATTGGGG+TGG | - | tig0020780:7212-7231 | None:intergenic | 40.0% | |
| CCAGCCATTGAATATGATAC+AGG | - | tig0020780:7431-7450 | None:intergenic | 40.0% | |
| CCTGTATCATATTCAATGGC+TGG | + | tig0020780:7428-7447 | Msa1385960:intron | 40.0% | |
| GGGATTGCTCATATGATTCA+AGG | + | tig0020780:7718-7737 | Msa1385960:CDS | 40.0% | |
| AGTTCAACCTATGACACAAC+AGG | + | tig0020780:7886-7905 | Msa1385960:CDS | 40.0% | |
| AAGCAAACCTGTTGTGTCAT+AGG | - | tig0020780:7896-7915 | None:intergenic | 40.0% | |
| !!! | TCTTTTTGTTTTTTGGGGCG+GGG | + | tig0020780:8448-8467 | Msa1385960:intron | 40.0% |
| AGCCAAGTCATGATTGCTAT+TGG | + | tig0020780:8666-8685 | Msa1385960:CDS | 40.0% | |
| ! | GCCAAGTCATGATTGCTATT+GGG | + | tig0020780:8667-8686 | Msa1385960:CDS | 40.0% |
| ! | CCAAGTCATGATTGCTATTG+GGG | + | tig0020780:8668-8687 | Msa1385960:CDS | 40.0% |
| ! | CAAGTCATGATTGCTATTGG+GGG | + | tig0020780:8669-8688 | Msa1385960:CDS | 40.0% |
| TACAATTGCAGCACAACTAC+TGG | - | tig0020780:8832-8851 | None:intergenic | 40.0% | |
| TTCCTGACTTACAGGTGATT+CGG | + | tig0020780:8994-9013 | Msa1385960:intron | 40.0% | |
| ! | TGCATTGCTAGCTTCTTCAA+CGG | - | tig0020780:9074-9093 | None:intergenic | 40.0% |
| TGAAGAAGCTAGCAATGCAA+TGG | + | tig0020780:9075-9094 | Msa1385960:CDS | 40.0% | |
| !! | AGCAATGCAATGGCTTTAGA+TGG | + | tig0020780:9085-9104 | Msa1385960:CDS | 40.0% |
| TAACTTAAGGCTTGGGATTC+TGG | + | tig0020780:9245-9264 | Msa1385960:intron | 40.0% | |
| TGTTACATTGAGAAGTAGCG+AGG | + | tig0020780:9636-9655 | Msa1385960:intron | 40.0% | |
| GTTACATTGAGAAGTAGCGA+GGG | + | tig0020780:9637-9656 | Msa1385960:intron | 40.0% | |
| GGGTCAAGATACCTTCAAAT+CGG | - | tig0020780:9741-9760 | None:intergenic | 40.0% | |
| GAGTTGTTGAATGAGTTGCA+TGG | - | tig0020780:9779-9798 | None:intergenic | 40.0% | |
| ATGTAAAGAAGAATGGAGGC+TGG | - | tig0020780:9871-9890 | None:intergenic | 40.0% | |
| ! | GCACTTGGTGAACAAAATGT+TGG | - | tig0020780:9894-9913 | None:intergenic | 40.0% |
| ATACATGCTCACAGTCAGAA+AGG | - | tig0020780:9926-9945 | None:intergenic | 40.0% | |
| GGAAGATGAGGAACTTAAAG+TGG | - | tig0020780:10075-10094 | None:intergenic | 40.0% | |
| ! | TTGTCCTTTTGACCTTGTGT+CGG | + | tig0020780:10325-10344 | Msa1385960:intron | 40.0% |
| TAATCCGACACAAGGTCAAA+AGG | - | tig0020780:10332-10351 | None:intergenic | 40.0% | |
| GTTCACAATAATCCGACACA+AGG | - | tig0020780:10340-10359 | None:intergenic | 40.0% | |
| TCGGATTATTGTGAACGAGT+AGG | + | tig0020780:10344-10363 | Msa1385960:intron | 40.0% | |
| CGGATTATTGTGAACGAGTA+GGG | + | tig0020780:10345-10364 | Msa1385960:intron | 40.0% | |
| CTAGAACTGCAGCTAATGAA+GGG | - | tig0020780:10724-10743 | None:intergenic | 40.0% | |
| ! | GATAAGTTGAGGTTTGCACT+TGG | - | tig0020780:10758-10777 | None:intergenic | 40.0% |
| AACCTCAACTTATCTGCTGT+TGG | + | tig0020780:10764-10783 | Msa1385960:CDS | 40.0% | |
| AAAGTGGGAACATTCCAGAT+AGG | - | tig0020780:10884-10903 | None:intergenic | 40.0% | |
| TTCCCACTTTCCAGTACAAT+TGG | + | tig0020780:10894-10913 | Msa1385960:intron | 40.0% | |
| CACCAATTGTACTGGAAAGT+GGG | - | tig0020780:10899-10918 | None:intergenic | 40.0% | |
| !!! | CATTTTAAGGCCATTGAGAG+CGG | - | tig0020780:11427-11446 | None:intergenic | 40.0% |
| ! | GCTCTCAATGGCCTTAAAAT+GGG | + | tig0020780:11426-11445 | Msa1385960:CDS | 40.0% |
| ATTGGAAATTGTGTGTGCCA+CGG | - | tig0020780:11614-11633 | None:intergenic | 40.0% | |
| TTGAGAGGAAGAAATGACCA+AGG | + | tig0020780:11702-11721 | Msa1385960:intron | 40.0% | |
| GAAAATTATTTCCCCCTCCT+TGG | - | tig0020780:11722-11741 | None:intergenic | 40.0% | |
| CAAACAGAGGGAAATAACTG+AGG | - | tig0020780:12057-12076 | None:intergenic | 40.0% | |
| AACGAGCATGTTATGTACCA+AGG | + | tig0020780:12094-12113 | Msa1385960:intron | 40.0% | |
| ACGAGCATGTTATGTACCAA+GGG | + | tig0020780:12095-12114 | Msa1385960:intron | 40.0% | |
| TGTACCAAGGGGGTTAATAA+CGG | + | tig0020780:12107-12126 | Msa1385960:intron | 40.0% | |
| TAAACCGTTATTAACCCCCT+TGG | - | tig0020780:12114-12133 | None:intergenic | 40.0% | |
| TGCACATTCTAAACCAGAAG+AGG | + | tig0020780:12280-12299 | Msa1385960:CDS | 40.0% | |
| GCAAAGATGTTATCCTCTTC+TGG | - | tig0020780:12296-12315 | None:intergenic | 40.0% | |
| AGAGGATAACATCTTTGCAC+GGG | + | tig0020780:12298-12317 | Msa1385960:CDS | 40.0% | |
| TCAACAGCATATAGCTATGC+AGG | + | tig0020780:12322-12341 | Msa1385960:CDS | 40.0% | |
| !! | CGCTATTTTCTGTTGGTTGA+AGG | - | tig0020780:12416-12435 | None:intergenic | 40.0% |
| CAACCAACAGAAAATAGCGT+TGG | + | tig0020780:12417-12436 | Msa1385960:intron | 40.0% | |
| !! | CTTCCAACGCTATTTTCTGT+TGG | - | tig0020780:12423-12442 | None:intergenic | 40.0% |
| ! | ACAGAAAATAGCGTTGGAAG+TGG | + | tig0020780:12423-12442 | Msa1385960:intron | 40.0% |
| ! | AAAATAGCGTTGGAAGTGGT+TGG | + | tig0020780:12427-12446 | Msa1385960:CDS | 40.0% |
| ! | AAATAGCGTTGGAAGTGGTT+GGG | + | tig0020780:12428-12447 | Msa1385960:CDS | 40.0% |
| CAGTCAGTCAACTCTAAACA+GGG | - | tig0020780:12561-12580 | None:intergenic | 40.0% | |
| TCAGTCAGTCAACTCTAAAC+AGG | - | tig0020780:12562-12581 | None:intergenic | 40.0% | |
| AGCAGGTGAGGTGAAAATAA+GGG | - | tig0020780:12682-12701 | None:intergenic | 40.0% | |
| CAAAGGAAATAAGGTAGAGC+AGG | - | tig0020780:12699-12718 | None:intergenic | 40.0% | |
| CTGATAGCAATTCAGTACGA+TGG | + | tig0020780:13099-13118 | Msa1385960:intron | 40.0% | |
| GTGTCTTAGACCATTTCAAC+GGG | + | tig0020780:13162-13181 | Msa1385960:intron | 40.0% | |
| TACTCTATGTCCCGTTGAAA+TGG | - | tig0020780:13175-13194 | None:intergenic | 40.0% | |
| CACCTATAATGACTGGCAAA+GGG | - | tig0020780:13235-13254 | None:intergenic | 40.0% | |
| ACACCTATAATGACTGGCAA+AGG | - | tig0020780:13236-13255 | None:intergenic | 40.0% | |
| TCCAGTAACGTCTTTGTTCA+TGG | + | tig0020780:13345-13364 | Msa1385960:intron | 40.0% | |
| CCAGTAACGTCTTTGTTCAT+GGG | + | tig0020780:13346-13365 | Msa1385960:intron | 40.0% | |
| TGCACCTTATTGGAATGTAC+AGG | + | tig0020780:13390-13409 | Msa1385960:intron | 40.0% | |
| GCACCTTATTGGAATGTACA+GGG | + | tig0020780:13391-13410 | Msa1385960:intron | 40.0% | |
| AGGGATAACAACATTCACCA+AGG | - | tig0020780:13418-13437 | None:intergenic | 40.0% | |
| CATACAAATTTCACGCACCT+CGG | + | tig0020780:13580-13599 | Msa1385960:intron | 40.0% | |
| ATACAAATTTCACGCACCTC+GGG | + | tig0020780:13581-13600 | Msa1385960:intron | 40.0% | |
| TTTAAATGGGTCGAGCTTTG+TGG | + | tig0020780:13627-13646 | Msa1385960:intron | 40.0% | |
| GTTTCTCTTGTAGGTGTTCT+TGG | + | tig0020780:13727-13746 | Msa1385960:intron | 40.0% | |
| GTGAATGCATGAACACATCA+AGG | - | tig0020780:14019-14038 | None:intergenic | 40.0% | |
| TGATGTGTTCATGCATTCAC+TGG | + | tig0020780:14019-14038 | Msa1385960:three_prime_UTR | 40.0% | |
| AAGCGAGGAAGGTGATGAAA+TGG | - | tig0020780:5589-5608 | None:intergenic | 45.0% | |
| !! | TGCAAAAGGAAGCACCTTGT+CGG | - | tig0020780:5663-5682 | None:intergenic | 45.0% |
| !! | AATGTCGGCTCTTCCAAAAG+TGG | + | tig0020780:6111-6130 | Msa1385960:intron | 45.0% |
| AGTGGAACTGCAATTTGCAG+TGG | + | tig0020780:6129-6148 | Msa1385960:intron | 45.0% | |
| ATACTTCAGCCAAGTTCCCA+TGG | + | tig0020780:6253-6272 | Msa1385960:intron | 45.0% | |
| TATCATCTCTGTGACGGTCA+CGG | - | tig0020780:6342-6361 | None:intergenic | 45.0% | |
| GACAGTTATAATCGGCAACG+TGG | + | tig0020780:6394-6413 | Msa1385960:CDS | 45.0% | |
| AACGTGGCCGTGATTATGAT+AGG | + | tig0020780:6410-6429 | Msa1385960:CDS | 45.0% | |
| GGCCGTGATTATGATAGGTT+TGG | + | tig0020780:6415-6434 | Msa1385960:intron | 45.0% | |
| GAGCACATTCAAAGAGATCC+AGG | + | tig0020780:6601-6620 | Msa1385960:CDS | 45.0% | |
| TTCAGATTGAGAAGGGGATC+TGG | - | tig0020780:6652-6671 | None:intergenic | 45.0% | |
| AGATCCCCTTCTCAATCTGA+AGG | + | tig0020780:6651-6670 | Msa1385960:CDS | 45.0% | |
| GATCCCCTTCTCAATCTGAA+GGG | + | tig0020780:6652-6671 | Msa1385960:CDS | 45.0% | |
| GTACCCTTCAGATTGAGAAG+GGG | - | tig0020780:6658-6677 | None:intergenic | 45.0% | |
| GTGTACCCTTCAGATTGAGA+AGG | - | tig0020780:6660-6679 | None:intergenic | 45.0% | |
| GTAAGTGAGGCTAGATCAAC+AGG | - | tig0020780:6783-6802 | None:intergenic | 45.0% | |
| !!! | AAGGACCTCTGGTTTTGACA+TGG | + | tig0020780:7071-7090 | Msa1385960:CDS | 45.0% |
| ! | TGAAACAGTGGGTGTTACAC+CGG | - | tig0020780:7109-7128 | None:intergenic | 45.0% |
| GGGTACAAACCTGAAACAGT+GGG | - | tig0020780:7120-7139 | None:intergenic | 45.0% | |
| TGGGTACAAACCTGAAACAG+TGG | - | tig0020780:7121-7140 | None:intergenic | 45.0% | |
| ATACAGACTGAATTGGGGTG+GGG | - | tig0020780:7210-7229 | None:intergenic | 45.0% | |
| !! | TGTTGCTTTGCTGTTGTGTG+TGG | + | tig0020780:7322-7341 | Msa1385960:intron | 45.0% |
| !!! | GTTGTGTGTGGTTTTGTGTC+TGG | + | tig0020780:7334-7353 | Msa1385960:intron | 45.0% |
| TTGGGTGAGAAGGCAATGTT+GGG | + | tig0020780:7370-7389 | Msa1385960:intron | 45.0% | |
| !! | ACACTGATAGGTAGGTTGGT+AGG | - | tig0020780:7404-7423 | None:intergenic | 45.0% |
| GTGTACACTGATAGGTAGGT+TGG | - | tig0020780:7408-7427 | None:intergenic | 45.0% | |
| GATACAGGGTGTACACTGAT+AGG | - | tig0020780:7416-7435 | None:intergenic | 45.0% | |
| TAGTAATGCAGGGCAAATGC+TGG | + | tig0020780:7696-7715 | Msa1385960:intron | 45.0% | |
| AGTAATGCAGGGCAAATGCT+GGG | + | tig0020780:7697-7716 | Msa1385960:intron | 45.0% | |
| AAAAGGCTACAAGGCATGCT+CGG | + | tig0020780:7994-8013 | Msa1385960:intron | 45.0% | |
| AGAACCTGCTCGTTAGCAAA+AGG | - | tig0020780:8044-8063 | None:intergenic | 45.0% | |
| TAACGAGCAGGTTCTCTACA+TGG | + | tig0020780:8049-8068 | Msa1385960:intron | 45.0% | |
| !!! | CTTTTTGTTTTTTGGGGCGG+GGG | + | tig0020780:8449-8468 | Msa1385960:intron | 45.0% |
| CCCCAATAGCAATCATGACT+TGG | - | tig0020780:8671-8690 | None:intergenic | 45.0% | |
| ATTGCACCATGCAAGTGTCT+TGG | + | tig0020780:8898-8917 | Msa1385960:intron | 45.0% | |
| TTGCACCATGCAAGTGTCTT+GGG | + | tig0020780:8899-8918 | Msa1385960:intron | 45.0% | |
| AACCGAATCACCTGTAAGTC+AGG | - | tig0020780:8999-9018 | None:intergenic | 45.0% | |
| GTTACATGTGAAGATGGAGC+TGG | - | tig0020780:9536-9555 | None:intergenic | 45.0% | |
| CAGCATGTGAGCCATATTTG+AGG | - | tig0020780:9610-9629 | None:intergenic | 45.0% | |
| ! | TAGGCTTCACTCCGATTTGA+AGG | + | tig0020780:9727-9746 | Msa1385960:intron | 45.0% |
| ! | CATGGGCTCTGATAAACTTG+GGG | - | tig0020780:9761-9780 | None:intergenic | 45.0% |
| ! | GCATGGGCTCTGATAAACTT+GGG | - | tig0020780:9762-9781 | None:intergenic | 45.0% |
| ! | TGCATGGGCTCTGATAAACT+TGG | - | tig0020780:9763-9782 | None:intergenic | 45.0% |
| GAAAGGAGAAACTGAGCACT+TGG | - | tig0020780:9909-9928 | None:intergenic | 45.0% | |
| TCTCTATGCAAAGGGCCATA+GGG | + | tig0020780:10170-10189 | Msa1385960:intron | 45.0% | |
| GTGTTGTAAGAAAAGGGGGT+GGG | - | tig0020780:10206-10225 | None:intergenic | 45.0% | |
| TGTGTTGTAAGAAAAGGGGG+TGG | - | tig0020780:10207-10226 | None:intergenic | 45.0% | |
| ! | CAATGATTTGGAGTTCGGAC+AGG | - | tig0020780:10384-10403 | None:intergenic | 45.0% |
| CAAATTGATTGGATTCGCGG+CGG | - | tig0020780:10489-10508 | None:intergenic | 45.0% | |
| ATATTGGACGGGCAAACTCT+GGG | - | tig0020780:10619-10638 | None:intergenic | 45.0% | |
| CCTAGAACTGCAGCTAATGA+AGG | - | tig0020780:10725-10744 | None:intergenic | 45.0% | |
| CCTTCATTAGCTGCAGTTCT+AGG | + | tig0020780:10722-10741 | Msa1385960:CDS | 45.0% | |
| GTCCAACAGCAGATAAGTTG+AGG | - | tig0020780:10769-10788 | None:intergenic | 45.0% | |
| ACCTTCTGTTCTGACCTATC+TGG | + | tig0020780:10867-10886 | Msa1385960:intron | 45.0% | |
| TCCAGATAGGTCAGAACAGA+AGG | - | tig0020780:10871-10890 | None:intergenic | 45.0% | |
| CCACCAATTGTACTGGAAAG+TGG | - | tig0020780:10900-10919 | None:intergenic | 45.0% | |
| CCACTTTCCAGTACAATTGG+TGG | + | tig0020780:10897-10916 | Msa1385960:intron | 45.0% | |
| AAAGATGCGATCAAGTCCCT+CGG | - | tig0020780:10925-10944 | None:intergenic | 45.0% | |
| GGACTTGATCGCATCTTTGT+GGG | + | tig0020780:10927-10946 | Msa1385960:CDS | 45.0% | |
| TTGATCGCATCTTTGTGGGT+GGG | + | tig0020780:10931-10950 | Msa1385960:CDS | 45.0% | |
| ACTTCGAAGAGGACTGCAAT+GGG | - | tig0020780:11146-11165 | None:intergenic | 45.0% | |
| AACTTCGAAGAGGACTGCAA+TGG | - | tig0020780:11147-11166 | None:intergenic | 45.0% | |
| CAAGCAATGTCTGTTACTGC+TGG | - | tig0020780:11402-11421 | None:intergenic | 45.0% | |
| ! | CGCTCTCAATGGCCTTAAAA+TGG | + | tig0020780:11425-11444 | Msa1385960:CDS | 45.0% |
| !! | CTGTCAGGTTAGCCTTTCTA+TGG | + | tig0020780:11478-11497 | Msa1385960:intron | 45.0% |
| AGAGGAAGAAATGACCAAGG+AGG | + | tig0020780:11705-11724 | Msa1385960:intron | 45.0% | |
| GAGGAAGAAATGACCAAGGA+GGG | + | tig0020780:11706-11725 | Msa1385960:intron | 45.0% | |
| AGGAAGAAATGACCAAGGAG+GGG | + | tig0020780:11707-11726 | Msa1385960:intron | 45.0% | |
| ATCAGCAAGAAGGGGATTCA+GGG | - | tig0020780:11908-11927 | None:intergenic | 45.0% | |
| AATCAGCAAGAAGGGGATTC+AGG | - | tig0020780:11909-11928 | None:intergenic | 45.0% | |
| CGAGCATGTTATGTACCAAG+GGG | + | tig0020780:12096-12115 | Msa1385960:intron | 45.0% | |
| GAGCATGTTATGTACCAAGG+GGG | + | tig0020780:12097-12116 | Msa1385960:intron | 45.0% | |
| AGCATATAGCTATGCAGGTG+AGG | + | tig0020780:12327-12346 | Msa1385960:intron | 45.0% | |
| GTGGTTGGGCTAAATATTCC+AGG | + | tig0020780:12442-12461 | Msa1385960:CDS | 45.0% | |
| TGGGGCTTTCATCGTTTGTT+GGG | - | tig0020780:12471-12490 | None:intergenic | 45.0% | |
| ! | CAACTCTAAACAGGGTGCTT+TGG | - | tig0020780:12553-12572 | None:intergenic | 45.0% |
| GAGCAGGTGAGGTGAAAATA+AGG | - | tig0020780:12683-12702 | None:intergenic | 45.0% | |
| GAAATAAGGTAGAGCAGGTG+AGG | - | tig0020780:12694-12713 | None:intergenic | 45.0% | |
| GACGGCCTTCAAAGGAAATA+AGG | - | tig0020780:12708-12727 | None:intergenic | 45.0% | |
| GTCCCTTTGCCAGTCATTAT+AGG | + | tig0020780:13230-13249 | Msa1385960:intron | 45.0% | |
| CCCATGAACAAAGACGTTAC+TGG | - | tig0020780:13349-13368 | None:intergenic | 45.0% | |
| GGTCCCTGTACATTCCAATA+AGG | - | tig0020780:13397-13416 | None:intergenic | 45.0% | |
| ATTGGAATGTACAGGGACCT+TGG | + | tig0020780:13398-13417 | Msa1385960:intron | 45.0% | |
| ATCCCTCGTCCAAATCCAAA+CGG | + | tig0020780:13432-13451 | Msa1385960:CDS | 45.0% | |
| GCTGTCTACAGGAATTGGAA+AGG | + | tig0020780:13458-13477 | Msa1385960:CDS | 45.0% | |
| GTGGTTTCGGTTTCTCTTGT+AGG | + | tig0020780:13718-13737 | Msa1385960:intron | 45.0% | |
| !!! | AATTGTATTTTAAATTAAAA+AGG | + | tig0020780:8845-8864 | Msa1385960:intron | 5.0% |
| !! | AAAAGGAAGCACCTTGTCGG+GGG | - | tig0020780:5660-5679 | None:intergenic | 50.0% |
| !! | CAAAAGGAAGCACCTTGTCG+GGG | - | tig0020780:5661-5680 | None:intergenic | 50.0% |
| !! | GCAAAAGGAAGCACCTTGTC+GGG | - | tig0020780:5662-5681 | None:intergenic | 50.0% |
| TGACCAGATCCATGGGAACT+TGG | - | tig0020780:6265-6284 | None:intergenic | 50.0% | |
| GCTCTCATGACCAGATCCAT+GGG | - | tig0020780:6272-6291 | None:intergenic | 50.0% | |
| TGCTCTCATGACCAGATCCA+TGG | - | tig0020780:6273-6292 | None:intergenic | 50.0% | |
| ! | ATGAGAGCACGAGGATGAGA+AGG | + | tig0020780:6284-6303 | Msa1385960:CDS | 50.0% |
| ACGAGGATGAGAAGGAGAGA+TGG | + | tig0020780:6292-6311 | Msa1385960:CDS | 50.0% | |
| TGAGAAGGAGAGATGGAGAC+AGG | + | tig0020780:6299-6318 | Msa1385960:CDS | 50.0% | |
| GTCTACAGCAAAAGGACCTC+TGG | + | tig0020780:7060-7079 | Msa1385960:intron | 50.0% | |
| !! | TGGTGCCATGTCAAAACCAG+AGG | - | tig0020780:7079-7098 | None:intergenic | 50.0% |
| GGTGTAACACCCACTGTTTC+AGG | + | tig0020780:7108-7127 | Msa1385960:CDS | 50.0% | |
| TACAGACTGAATTGGGGTGG+GGG | - | tig0020780:7209-7228 | None:intergenic | 50.0% | |
| GTTGGGTGAGAAGGCAATGT+TGG | + | tig0020780:7369-7388 | Msa1385960:intron | 50.0% | |
| CAGGGTGTACACTGATAGGT+AGG | - | tig0020780:7412-7431 | None:intergenic | 50.0% | |
| CTGCAGACGTTGAGAGTGAA+AGG | - | tig0020780:7475-7494 | None:intergenic | 50.0% | |
| TTCACTCTCAACGTCTGCAG+TGG | + | tig0020780:7475-7494 | Msa1385960:intron | 50.0% | |
| GTAATGCAGGGCAAATGCTG+GGG | + | tig0020780:7698-7717 | Msa1385960:intron | 50.0% | |
| CTCACCATATGGGATATCGC+AGG | + | tig0020780:7756-7775 | Msa1385960:CDS | 50.0% | |
| AGCACCTGCGATATCCCATA+TGG | - | tig0020780:7763-7782 | None:intergenic | 50.0% | |
| ! | TCCTCCTTTTGCTAACGAGC+AGG | + | tig0020780:8037-8056 | Msa1385960:CDS | 50.0% |
| ACCTGCTCGTTAGCAAAAGG+AGG | - | tig0020780:8041-8060 | None:intergenic | 50.0% | |
| GCTATTGGGGGAAATTCTGC+TGG | + | tig0020780:8681-8700 | Msa1385960:CDS | 50.0% | |
| CAAGACCCAAGACACTTGCA+TGG | - | tig0020780:8907-8926 | None:intergenic | 50.0% | |
| CATGCAAGTGTCTTGGGTCT+TGG | + | tig0020780:8905-8924 | Msa1385960:intron | 50.0% | |
| CTGTGAATAGGAGGAAGCGA+TGG | - | tig0020780:10096-10115 | None:intergenic | 50.0% | |
| CTCTCTATGCAAAGGGCCAT+AGG | + | tig0020780:10169-10188 | Msa1385960:intron | 50.0% | |
| ! | GTGGGTTGTTGTCAACCCTA+TGG | - | tig0020780:10188-10207 | None:intergenic | 50.0% |
| CATATTGGACGGGCAAACTC+TGG | - | tig0020780:10620-10639 | None:intergenic | 50.0% | |
| ! | GTGTTGCTGTGAGAGTTCGT+AGG | + | tig0020780:10684-10703 | Msa1385960:CDS | 50.0% |
| AGTTGAGGTTTGCACTTGGC+TGG | - | tig0020780:10754-10773 | None:intergenic | 50.0% | |
| TCTGCTGTTGGACTTTCTGC+AGG | + | tig0020780:10776-10795 | Msa1385960:CDS | 50.0% | |
| CTGCTGTTGGACTTTCTGCA+GGG | + | tig0020780:10777-10796 | Msa1385960:CDS | 50.0% | |
| AGTACAATTGGTGGAGCCGA+GGG | + | tig0020780:10906-10925 | Msa1385960:intron | 50.0% | |
| GGGACTTGATCGCATCTTTG+TGG | + | tig0020780:10926-10945 | Msa1385960:CDS | 50.0% | |
| CTTGATCGCATCTTTGTGGG+TGG | + | tig0020780:10930-10949 | Msa1385960:CDS | 50.0% | |
| ! | ATTGCTTGTGCCGCTCTCAA+TGG | + | tig0020780:11414-11433 | Msa1385960:CDS | 50.0% |
| GGAAGAAATGACCAAGGAGG+GGG | + | tig0020780:11708-11727 | Msa1385960:intron | 50.0% | |
| TCAGCAAGAAGGGGATTCAG+GGG | - | tig0020780:11907-11926 | None:intergenic | 50.0% | |
| ! | TCATCGTTTGTTGGGACTCC+TGG | - | tig0020780:12463-12482 | None:intergenic | 50.0% |
| GTGGGGCTTTCATCGTTTGT+TGG | - | tig0020780:12472-12491 | None:intergenic | 50.0% | |
| TCAGTAGTGACGGCCTTCAA+AGG | - | tig0020780:12716-12735 | None:intergenic | 50.0% | |
| CGGGATGAATGCCGCAAATT+TGG | + | tig0020780:12782-12801 | Msa1385960:CDS | 50.0% | |
| CTCTGGTTAAGTGGGTGAGT+TGG | + | tig0020780:12887-12906 | Msa1385960:intron | 50.0% | |
| CTCCGTTTGGATTTGGACGA+GGG | - | tig0020780:13437-13456 | None:intergenic | 50.0% | |
| TCTCCGTTTGGATTTGGACG+AGG | - | tig0020780:13438-13457 | None:intergenic | 50.0% | |
| GACAGCTCTCCGTTTGGATT+TGG | - | tig0020780:13444-13463 | None:intergenic | 50.0% | |
| GGAGAGCTGTCTACAGGAAT+TGG | + | tig0020780:13453-13472 | Msa1385960:CDS | 50.0% | |
| CATTGCAGGGAAAGCGAGGA+AGG | - | tig0020780:5600-5619 | None:intergenic | 55.0% | |
| CAGACATTGCAGGGAAAGCG+AGG | - | tig0020780:5604-5623 | None:intergenic | 55.0% | |
| CAGCCAAGTTCCCATGGATC+TGG | + | tig0020780:6259-6278 | Msa1385960:intron | 55.0% | |
| ! | GATCTGGTCATGAGAGCACG+AGG | + | tig0020780:6275-6294 | Msa1385960:CDS | 55.0% |
| ACAGACTGAATTGGGGTGGG+GGG | - | tig0020780:7208-7227 | None:intergenic | 55.0% | |
| GGGGGAAATTCTGCTGGATC+AGG | + | tig0020780:8687-8706 | Msa1385960:CDS | 55.0% | |
| GGAGGAAGCGATGGAAGATG+AGG | - | tig0020780:10087-10106 | None:intergenic | 55.0% | |
| AGGTTTGCACTTGGCTGGCA+GGG | - | tig0020780:10749-10768 | None:intergenic | 55.0% | |
| CTCGGCTCCACCAATTGTAC+TGG | - | tig0020780:10907-10926 | None:intergenic | 55.0% | |
| CAGTACAATTGGTGGAGCCG+AGG | + | tig0020780:10905-10924 | Msa1385960:intron | 55.0% | |
| ! | CTGTAAGGCGTGCTACTGTC+AGG | + | tig0020780:11463-11482 | Msa1385960:CDS | 55.0% |
| CCTGTAGACAGCTCTCCGTT+TGG | - | tig0020780:13450-13469 | None:intergenic | 55.0% | |
| CCAAACGGAGAGCTGTCTAC+AGG | + | tig0020780:13447-13466 | Msa1385960:CDS | 55.0% | |
| AAATTTCACGCACCTCGGGC+TGG | + | tig0020780:13585-13604 | Msa1385960:intron | 55.0% | |
| AATTTCACGCACCTCGGGCT+GGG | + | tig0020780:13586-13605 | Msa1385960:intron | 55.0% | |
| CATCTCTGTGACGGTCACGG+TGG | - | tig0020780:6339-6358 | None:intergenic | 60.0% | |
| GACATGGCACCACCTGCTAC+CGG | + | tig0020780:7087-7106 | Msa1385960:CDS | 60.0% | |
| ! | GGTGTTACACCGGTAGCAGG+TGG | - | tig0020780:7099-7118 | None:intergenic | 60.0% |
| ! | GTGGGTGTTACACCGGTAGC+AGG | - | tig0020780:7102-7121 | None:intergenic | 60.0% |
| CATGCTCGGCGAGTGTACGT+TGG | + | tig0020780:8008-8027 | Msa1385960:CDS | 60.0% | |
| CTCGGCGAGTGTACGTTGGT+GGG | + | tig0020780:8012-8031 | Msa1385960:CDS | 60.0% | |
| GAGGTTTGCACTTGGCTGGC+AGG | - | tig0020780:10750-10769 | None:intergenic | 60.0% | |
| AATCACTATGGCCCAGCCCG+AGG | - | tig0020780:13600-13619 | None:intergenic | 60.0% | |
| CGGTGCTTCTTCCCCCGACA+AGG | + | tig0020780:5646-5665 | Msa1385960:CDS | 65.0% | |
| GCTCGGCGAGTGTACGTTGG+TGG | + | tig0020780:8011-8030 | Msa1385960:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020780 | gene | 5467 | 14065 | 5467 | ID=Msa1385960;Name=Msa1385960 |
| tig0020780 | mRNA | 5467 | 14065 | 5467 | ID=Msa1385960-mRNA-1;Parent=Msa1385960;Name=Msa1385960-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.94|0.94|1|1|1|18|188|569 |
| tig0020780 | exon | 5467 | 5667 | 5467 | ID=Msa1385960-mRNA-1:exon:9900;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 6262 | 6431 | 6262 | ID=Msa1385960-mRNA-1:exon:9901;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 6557 | 6673 | 6557 | ID=Msa1385960-mRNA-1:exon:9902;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 7068 | 7129 | 7068 | ID=Msa1385960-mRNA-1:exon:9903;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 7707 | 7777 | 7707 | ID=Msa1385960-mRNA-1:exon:9904;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 7863 | 7907 | 7863 | ID=Msa1385960-mRNA-1:exon:9905;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 7999 | 8058 | 7999 | ID=Msa1385960-mRNA-1:exon:9906;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 8648 | 8708 | 8648 | ID=Msa1385960-mRNA-1:exon:9907;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 9008 | 9111 | 9008 | ID=Msa1385960-mRNA-1:exon:9908;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 10683 | 10798 | 10683 | ID=Msa1385960-mRNA-1:exon:9909;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 10908 | 11006 | 10908 | ID=Msa1385960-mRNA-1:exon:9910;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 11153 | 11228 | 11153 | ID=Msa1385960-mRNA-1:exon:9911;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 11396 | 11484 | 11396 | ID=Msa1385960-mRNA-1:exon:9912;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 12280 | 12343 | 12280 | ID=Msa1385960-mRNA-1:exon:9913;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 12427 | 12513 | 12427 | ID=Msa1385960-mRNA-1:exon:9914;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 12722 | 12803 | 12722 | ID=Msa1385960-mRNA-1:exon:9915;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 13412 | 13479 | 13412 | ID=Msa1385960-mRNA-1:exon:9916;Parent=Msa1385960-mRNA-1 |
| tig0020780 | exon | 13740 | 14065 | 13740 | ID=Msa1385960-mRNA-1:exon:9917;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 5467 | 5667 | 5467 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 6262 | 6431 | 6262 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 6557 | 6673 | 6557 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 7068 | 7129 | 7068 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 7707 | 7777 | 7707 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 7863 | 7907 | 7863 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 7999 | 8058 | 7999 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 8648 | 8708 | 8648 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 9008 | 9111 | 9008 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 10683 | 10798 | 10683 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 10908 | 11006 | 10908 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 11153 | 11228 | 11153 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 11396 | 11484 | 11396 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 12280 | 12343 | 12280 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 12427 | 12513 | 12427 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 12722 | 12803 | 12722 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 13412 | 13479 | 13412 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | CDS | 13740 | 13877 | 13740 | ID=Msa1385960-mRNA-1:cds;Parent=Msa1385960-mRNA-1 |
| tig0020780 | three_prime_UTR | 13878 | 14065 | 13878 | ID=Msa1385960-mRNA-1:three_prime_utr;Parent=Msa1385960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
