Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417120 | sp|Q9ZR39|U2A2A_NICPL | 64.303 | 409 | 128 | 5 | 167 | 568 | 157 | 554 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417120 | G7IP17 | 98.659 | 522 | 4 | 1 | 51 | 569 | 1 | 522 | 0.0 | 1063 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024680 | Msa1417120 | 0.816125 | 6.495931e-52 | -8.615850e-47 |
| Msa0095380 | Msa1417120 | 0.823865 | 1.100445e-53 | -8.615850e-47 |
| Msa0105420 | Msa1417120 | 0.820987 | 5.129088e-53 | -8.615850e-47 |
| Msa0120330 | Msa1417120 | 0.804589 | 2.009364e-49 | -8.615850e-47 |
| Msa1385960 | Msa1417120 | 0.831511 | 1.601485e-55 | -8.615850e-47 |
| Msa1417120 | Msa1439960 | 0.849252 | 3.643700e-60 | -8.615850e-47 |
| Msa1417120 | Msa1445100 | 0.819107 | 1.381779e-52 | -8.615850e-47 |
| Msa1417120 | Msa1460470 | 0.804099 | 2.541853e-49 | -8.615850e-47 |
| Msa0618010 | Msa1417120 | 0.802926 | 4.449487e-49 | -8.615850e-47 |
| Msa0638320 | Msa1417120 | 0.808747 | 2.660296e-50 | -8.615850e-47 |
| Msa0642650 | Msa1417120 | 0.821879 | 3.192656e-53 | -8.615850e-47 |
| Msa0669850 | Msa1417120 | 0.832104 | 1.143471e-55 | -8.615850e-47 |
| Msa0677270 | Msa1417120 | 0.803503 | 3.378967e-49 | -8.615850e-47 |
| Msa0712980 | Msa1417120 | 0.802946 | 4.407894e-49 | -8.615850e-47 |
| Msa0743200 | Msa1417120 | 0.805235 | 1.472457e-49 | -8.615850e-47 |
| Msa0754720 | Msa1417120 | -0.800074 | 1.709388e-48 | -8.615850e-47 |
| Msa0137040 | Msa1417120 | 0.802032 | 6.801497e-49 | -8.615850e-47 |
| Msa0143080 | Msa1417120 | 0.801004 | 1.104601e-48 | -8.615850e-47 |
| Msa0168100 | Msa1417120 | 0.806802 | 6.892501e-50 | -8.615850e-47 |
| Msa0172960 | Msa1417120 | -0.801348 | 9.392700e-49 | -8.615850e-47 |
| Msa0183620 | Msa1417120 | 0.808331 | 3.264490e-50 | -8.615850e-47 |
| Msa0183830 | Msa1417120 | 0.803459 | 3.451471e-49 | -8.615850e-47 |
| Msa0188630 | Msa1417120 | 0.814988 | 1.163594e-51 | -8.615850e-47 |
| Msa0194970 | Msa1417120 | 0.812283 | 4.583220e-51 | -8.615850e-47 |
| Msa0230770 | Msa1417120 | 0.801095 | 1.058257e-48 | -8.615850e-47 |
| Msa0231880 | Msa1417120 | 0.807943 | 3.948523e-50 | -8.615850e-47 |
| Msa0236980 | Msa1417120 | 0.803475 | 3.424605e-49 | -8.615850e-47 |
| Msa1237030 | Msa1417120 | 0.810340 | 1.210245e-50 | -8.615850e-47 |
| Msa1249870 | Msa1417120 | 0.805621 | 1.221919e-49 | -8.615850e-47 |
| Msa1265960 | Msa1417120 | 0.809557 | 1.783819e-50 | -8.615850e-47 |
| Msa1269580 | Msa1417120 | -0.801735 | 7.825776e-49 | -8.615850e-47 |
| Msa1280130 | Msa1417120 | 0.815424 | 9.311275e-52 | -8.615850e-47 |
| Msa1306430 | Msa1417120 | 0.807059 | 6.082037e-50 | -8.615850e-47 |
| Msa1337090 | Msa1417120 | 0.816758 | 4.687748e-52 | -8.615850e-47 |
| Msa0402330 | Msa1417120 | 0.802445 | 5.590530e-49 | -8.615850e-47 |
| Msa0414950 | Msa1417120 | -0.812323 | 4.491300e-51 | -8.615850e-47 |
| Msa0423360 | Msa1417120 | -0.800161 | 1.641231e-48 | -8.615850e-47 |
| Msa0431430 | Msa1417120 | 0.816061 | 6.713321e-52 | -8.615850e-47 |
| Msa0436280 | Msa1417120 | -0.800225 | 1.592587e-48 | -8.615850e-47 |
| Msa0469910 | Msa1417120 | -0.810662 | 1.031079e-50 | -8.615850e-47 |
| Msa0476320 | Msa1417120 | 0.809335 | 1.991345e-50 | -8.615850e-47 |
| Msa0480320 | Msa1417120 | 0.821512 | 3.880908e-53 | -8.615850e-47 |
| Msa1015060 | Msa1417120 | 0.809845 | 1.547293e-50 | -8.615850e-47 |
| Msa1018790 | Msa1417120 | 0.801347 | 9.396664e-49 | -8.615850e-47 |
| Msa1026760 | Msa1417120 | 0.801114 | 1.048885e-48 | -8.615850e-47 |
| Msa1026790 | Msa1417120 | 0.803318 | 3.691058e-49 | -8.615850e-47 |
| Msa1040890 | Msa1417120 | 0.828056 | 1.111101e-54 | -8.615850e-47 |
| Msa1044340 | Msa1417120 | 0.820213 | 7.722438e-53 | -8.615850e-47 |
| Msa1082700 | Msa1417120 | 0.801785 | 7.641649e-49 | -8.615850e-47 |
| Msa0242680 | Msa1417120 | 0.804292 | 2.317196e-49 | -8.615850e-47 |
| Msa0270270 | Msa1417120 | 0.809482 | 1.851509e-50 | -8.615850e-47 |
| Msa0280490 | Msa1417120 | 0.828133 | 1.065052e-54 | -8.615850e-47 |
| Msa0280900 | Msa1417120 | 0.817919 | 2.568596e-52 | -8.615850e-47 |
| Msa0296760 | Msa1417120 | 0.807463 | 4.993950e-50 | -8.615850e-47 |
| Msa0315240 | Msa1417120 | 0.805439 | 1.333999e-49 | -8.615850e-47 |
| Msa0320100 | Msa1417120 | 0.809196 | 2.132309e-50 | -8.615850e-47 |
| Msa0328210 | Msa1417120 | 0.814286 | 1.664194e-51 | -8.615850e-47 |
| Msa1135690 | Msa1417120 | 0.800376 | 1.484018e-48 | -8.615850e-47 |
| Msa1171870 | Msa1417120 | 0.801546 | 8.556813e-49 | -8.615850e-47 |
| Msa1174010 | Msa1417120 | 0.815718 | 8.010222e-52 | -8.615850e-47 |
| Msa1217830 | Msa1417120 | 0.806199 | 9.239321e-50 | -8.615850e-47 |
| Msa1217860 | Msa1417120 | 0.845067 | 5.117875e-59 | -8.615850e-47 |
| Msa0520320 | Msa1417120 | 0.823439 | 1.384166e-53 | -8.615850e-47 |
| Msa0521880 | Msa1417120 | 0.801215 | 1.000321e-48 | -8.615850e-47 |
| Msa0532300 | Msa1417120 | 0.800352 | 1.500746e-48 | -8.615850e-47 |
| Msa0535030 | Msa1417120 | 0.826270 | 2.974600e-54 | -8.615850e-47 |
| Msa0535060 | Msa1417120 | 0.821250 | 4.462219e-53 | -8.615850e-47 |
| Msa0562300 | Msa1417120 | -0.808773 | 2.626827e-50 | -8.615850e-47 |
| Msa0564930 | Msa1417120 | 0.803711 | 3.059440e-49 | -8.615850e-47 |
| Msa0591060 | Msa1417120 | 0.823295 | 1.495694e-53 | -8.615850e-47 |
| Msa0591770 | Msa1417120 | 0.845274 | 4.497185e-59 | -8.615850e-47 |
| Msa0863370 | Msa1417120 | 0.815463 | 9.126390e-52 | -8.615850e-47 |
| Msa0890250 | Msa1417120 | 0.816838 | 4.498797e-52 | -8.615850e-47 |
| Msa0907700 | Msa1417120 | 0.806320 | 8.712754e-50 | -8.615850e-47 |
| Msa0925160 | Msa1417120 | 0.802947 | 4.405494e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417120 | MtrunA17_Chr2g0281891 | 98.659 | 522 | 4 | 1 | 51 | 569 | 1 | 522 | 0.0 | 1063 |
| Msa1417120 | MtrunA17_Chr3g0077591 | 65.435 | 379 | 111 | 5 | 199 | 568 | 4 | 371 | 6.05e-174 | 496 |
| Msa1417120 | MtrunA17_Chr4g0013971 | 64.491 | 383 | 118 | 5 | 193 | 568 | 55 | 426 | 9.48e-173 | 496 |
| Msa1417120 | MtrunA17_Chr1g0166661 | 27.885 | 416 | 237 | 16 | 139 | 526 | 470 | 850 | 8.93e-29 | 122 |
| Msa1417120 | MtrunA17_Chr1g0201001 | 43.056 | 72 | 41 | 0 | 347 | 418 | 31 | 102 | 4.03e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417120 | AT1G60900.1 | 61.667 | 420 | 121 | 5 | 168 | 568 | 190 | 588 | 3.84e-179 | 518 |
| Msa1417120 | AT4G36690.4 | 52.941 | 527 | 209 | 10 | 67 | 567 | 36 | 549 | 4.30e-174 | 504 |
| Msa1417120 | AT4G36690.1 | 61.594 | 414 | 138 | 7 | 164 | 567 | 169 | 571 | 1.14e-171 | 499 |
| Msa1417120 | AT4G36690.2 | 62.464 | 349 | 110 | 7 | 164 | 502 | 169 | 506 | 1.87e-140 | 418 |
| Msa1417120 | AT4G36690.3 | 62.178 | 349 | 111 | 7 | 164 | 502 | 169 | 506 | 2.02e-139 | 416 |
| Msa1417120 | AT1G60830.2 | 55.769 | 104 | 46 | 0 | 465 | 568 | 7 | 110 | 6.23e-36 | 130 |
| Msa1417120 | AT1G60830.1 | 55.769 | 104 | 46 | 0 | 465 | 568 | 7 | 110 | 6.23e-36 | 130 |
| Msa1417120 | AT2G33435.1 | 27.737 | 411 | 218 | 12 | 134 | 509 | 771 | 1137 | 4.69e-32 | 132 |
| Msa1417120 | AT5G09880.1 | 26.065 | 399 | 196 | 17 | 225 | 564 | 165 | 523 | 5.10e-17 | 84.7 |
| Msa1417120 | AT1G71800.1 | 55.102 | 49 | 22 | 0 | 347 | 395 | 11 | 59 | 4.22e-11 | 65.9 |
Find 157 sgRNAs with CRISPR-Local
Find 570 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCTAAATGGTAGGAAATT+TGG | 0.114660 | tig0024442:-45280 | Msa1417120:CDS |
| CACTGGAAAATAACGTTTAT+TGG | 0.182085 | tig0024442:-45032 | Msa1417120:three_prime_UTR |
| CTCTAAATGGTAGGAAATTT+GGG | 0.201789 | tig0024442:-45279 | Msa1417120:CDS |
| GTTTCTCTTGTAGGTGTTCT+TGG | 0.203987 | tig0024442:-45341 | Msa1417120:intron |
| CGCTCTCAATGGCCTTAAAA+TGG | 0.209077 | tig0024442:-47643 | Msa1417120:CDS |
| AGAGAATTGCTTCAAGCTTT+TGG | 0.220313 | tig0024442:-48083 | Msa1417120:CDS |
| GGTGTAACACCCACTGTTTC+AGG | 0.230262 | tig0024442:-51959 | Msa1417120:intron |
| CGGGATGAATGCCGCAAATT+TGG | 0.236754 | tig0024442:-46286 | Msa1417120:intron |
| AACACACGAAGAATCAATTT+AGG | 0.238106 | tig0024442:-53525 | Msa1417120:CDS |
| CCTTCATTAGCTGCAGTTCT+AGG | 0.238709 | tig0024442:-48345 | Msa1417120:CDS |
| GCAAAGATGTTATCCTCTTC+TGG | 0.283444 | tig0024442:+46775 | None:intergenic |
| ACTGAACAATTAACTGATAA+TGG | 0.287828 | tig0024442:-46337 | Msa1417120:CDS |
| ACAGGAAATTCTAAAGGATA+TGG | 0.293149 | tig0024442:-47877 | Msa1417120:CDS |
| GACAGCTCTCCGTTTGGATT+TGG | 0.294715 | tig0024442:+45627 | None:intergenic |
| AGCCAAGTCATGATTGCTAT+TGG | 0.298202 | tig0024442:-50401 | Msa1417120:CDS |
| GCCAAGTCATGATTGCTATT+GGG | 0.324763 | tig0024442:-50400 | Msa1417120:CDS |
| TGAGAAGAAATTTGCGTTTG+TGG | 0.342929 | tig0024442:-50028 | Msa1417120:CDS |
| TGTACTTCAGTAAAGTAGTA+TGG | 0.344863 | tig0024442:+48110 | None:intergenic |
| ACACACGAAGAATCAATTTA+GGG | 0.348931 | tig0024442:-53524 | Msa1417120:CDS |
| ATAGTTAGAGATAAAGAAAC+AGG | 0.353650 | tig0024442:-47895 | Msa1417120:CDS |
| AAGCAAACCTGTTGTGTCAT+AGG | 0.354698 | tig0024442:+51174 | None:intergenic |
| TCATCGTTTGTTGGGACTCC+TGG | 0.357389 | tig0024442:+46608 | None:intergenic |
| TGGAGAATATGAAGAAATAT+TGG | 0.357494 | tig0024442:-46317 | Msa1417120:CDS |
| GGAGAGCTGTCTACAGGAAT+TGG | 0.374888 | tig0024442:-45615 | Msa1417120:CDS |
| ACACAAAATTTCTCACCATA+TGG | 0.382567 | tig0024442:-51322 | Msa1417120:CDS |
| TCTGCTGTTGGACTTTCTGC+AGG | 0.385674 | tig0024442:-48291 | Msa1417120:CDS |
| ATATGGTTTCTGCATCTATC+AGG | 0.394770 | tig0024442:-47860 | Msa1417120:intron |
| GTGGGGCTTTCATCGTTTGT+TGG | 0.399818 | tig0024442:+46599 | None:intergenic |
| TGGGGCTTTCATCGTTTGTT+GGG | 0.403041 | tig0024442:+46600 | None:intergenic |
| TATGATTTGTAACCGATTGT+AGG | 0.404522 | tig0024442:-45202 | Msa1417120:exon |
| TTCCCACTTTCCAGTACAAT+TGG | 0.408387 | tig0024442:-48173 | Msa1417120:intron |
| GAGGTTTGCACTTGGCTGGC+AGG | 0.410052 | tig0024442:+48320 | None:intergenic |
| GGGACTTGATCGCATCTTTG+TGG | 0.411118 | tig0024442:-48141 | Msa1417120:CDS |
| TTCAGATTGAGAAGGGGATC+TGG | 0.415093 | tig0024442:+52418 | None:intergenic |
| GCAAAAGGAAGCACCTTGTC+GGG | 0.416096 | tig0024442:+53408 | None:intergenic |
| GTCTACAGCAAAAGGACCTC+TGG | 0.423373 | tig0024442:-52007 | Msa1417120:intron |
| TGAGAAGGAGAGATGGAGAC+AGG | 0.430183 | tig0024442:-52768 | Msa1417120:CDS |
| AGCAATGCAATGGCTTTAGA+TGG | 0.433781 | tig0024442:-49982 | Msa1417120:CDS |
| TTCCTGACTTACAGGTGATT+CGG | 0.435169 | tig0024442:-50073 | Msa1417120:intron |
| TGACCAGATCCATGGGAACT+TGG | 0.436941 | tig0024442:+52805 | None:intergenic |
| CCTGTAGACAGCTCTCCGTT+TGG | 0.443182 | tig0024442:+45621 | None:intergenic |
| AGAGATACAAGGAACAGATA+TGG | 0.454398 | tig0024442:-52488 | Msa1417120:CDS |
| AAAATAGCGTTGGAAGTGGT+TGG | 0.455818 | tig0024442:-46641 | Msa1417120:CDS |
| CTCAGTTAAACATAAAACTT+TGG | 0.457841 | tig0024442:+46577 | None:intergenic |
| AGGTTTGCACTTGGCTGGCA+GGG | 0.458606 | tig0024442:+48321 | None:intergenic |
| GGACTTGATCGCATCTTTGT+GGG | 0.458801 | tig0024442:-48140 | Msa1417120:CDS |
| CATTATATATGTAATAAACT+TGG | 0.458814 | tig0024442:+45105 | None:intergenic |
| AGTTGAGGTTTGCACTTGGC+TGG | 0.465507 | tig0024442:+48316 | None:intergenic |
| CCTAGAACTGCAGCTAATGA+AGG | 0.469669 | tig0024442:+48345 | None:intergenic |
| TAGTAATGCAGGGCAAATGC+TGG | 0.469899 | tig0024442:-51371 | Msa1417120:intron |
| GTGGTTGGGCTAAATATTCC+AGG | 0.472321 | tig0024442:-46626 | Msa1417120:CDS |
| GCAGATATGACAGTTATAAT+CGG | 0.474034 | tig0024442:-52681 | Msa1417120:CDS |
| GCTCTCAATGGCCTTAAAAT+GGG | 0.475203 | tig0024442:-47642 | Msa1417120:CDS |
| AAGCGAGGAAGGTGATGAAA+TGG | 0.476412 | tig0024442:+53481 | None:intergenic |
| GAGATAAAACATTGACTGTA+AGG | 0.479393 | tig0024442:-47620 | Msa1417120:CDS |
| TGCAAAAGGAAGCACCTTGT+CGG | 0.480254 | tig0024442:+53407 | None:intergenic |
| CAGCCAAGTTCCCATGGATC+TGG | 0.480725 | tig0024442:-52808 | Msa1417120:CDS |
| CCAAGTCATGATTGCTATTG+GGG | 0.481165 | tig0024442:-50399 | Msa1417120:CDS |
| CCCCAATAGCAATCATGACT+TGG | 0.483072 | tig0024442:+50399 | None:intergenic |
| GGGATTGCTCATATGATTCA+AGG | 0.484306 | tig0024442:-51349 | Msa1417120:CDS |
| ATTGCTTGTGCCGCTCTCAA+TGG | 0.485447 | tig0024442:-47654 | Msa1417120:CDS |
| CCACTTTCCAGTACAATTGG+TGG | 0.487543 | tig0024442:-48170 | Msa1417120:intron |
| ATGATTTGTAACCGATTGTA+GGG | 0.489405 | tig0024442:-45201 | Msa1417120:exon |
| CAAGCAATGTCTGTTACTGC+TGG | 0.489517 | tig0024442:+47669 | None:intergenic |
| AACCTCAACTTATCTGCTGT+TGG | 0.490163 | tig0024442:-48303 | Msa1417120:CDS |
| CACAAAATTTCTCACCATAT+GGG | 0.492872 | tig0024442:-51321 | Msa1417120:CDS |
| AGTTCAACCTATGACACAAC+AGG | 0.496059 | tig0024442:-51181 | Msa1417120:intron |
| TGCTCTCATGACCAGATCCA+TGG | 0.496123 | tig0024442:+52797 | None:intergenic |
| CTGTAAGGCGTGCTACTGTC+AGG | 0.497970 | tig0024442:-47605 | Msa1417120:intron |
| AAATAGCGTTGGAAGTGGTT+GGG | 0.499842 | tig0024442:-46640 | Msa1417120:CDS |
| CAACATGCATACCAAATTTG+CGG | 0.500951 | tig0024442:+46275 | None:intergenic |
| TCAACAGCATATAGCTATGC+AGG | 0.501613 | tig0024442:-46746 | Msa1417120:intron |
| TCTCCGTTTGGATTTGGACG+AGG | 0.503529 | tig0024442:+45633 | None:intergenic |
| TGATGTGTTCATGCATTCAC+TGG | 0.507797 | tig0024442:-45049 | Msa1417120:three_prime_UTR |
| TTATCGATGTCAGACATTGC+AGG | 0.508918 | tig0024442:+53456 | None:intergenic |
| GCTCGGCGAGTGTACGTTGG+TGG | 0.509407 | tig0024442:-51056 | Msa1417120:CDS |
| CACAGAGATGATAAATATGA+AGG | 0.509599 | tig0024442:-52718 | Msa1417120:CDS |
| AGTAATGCAGGGCAAATGCT+GGG | 0.509613 | tig0024442:-51370 | Msa1417120:intron |
| CTTGATCGCATCTTTGTGGG+TGG | 0.510330 | tig0024442:-48137 | Msa1417120:CDS |
| GTTAAACATAAAACTTTGGT+GGG | 0.510619 | tig0024442:+46581 | None:intergenic |
| AGAAATATTGGAAGACATGC+GGG | 0.510930 | tig0024442:-46305 | Msa1417120:CDS |
| CCAAACGGAGAGCTGTCTAC+AGG | 0.512561 | tig0024442:-45621 | Msa1417120:CDS |
| CTCGGCGAGTGTACGTTGGT+GGG | 0.513430 | tig0024442:-51055 | Msa1417120:CDS |
| GAGCACATTCAAAGAGATCC+AGG | 0.515574 | tig0024442:-52466 | Msa1417120:CDS |
| ATTGGAATGTACAGGGACCT+TGG | 0.522185 | tig0024442:-45670 | Msa1417120:intron |
| AGAACCTGCTCGTTAGCAAA+AGG | 0.522299 | tig0024442:+51026 | None:intergenic |
| AAAGAAACAGGAAATTCTAA+AGG | 0.522577 | tig0024442:-47883 | Msa1417120:CDS |
| AACGTGGCCGTGATTATGAT+AGG | 0.523655 | tig0024442:-52657 | Msa1417120:intron |
| GACATGGCACCACCTGCTAC+CGG | 0.523878 | tig0024442:-51980 | Msa1417120:CDS |
| ATTATATCTCTCCCTACAAT+CGG | 0.524407 | tig0024442:+45190 | None:intergenic |
| AGTTAAACATAAAACTTTGG+TGG | 0.525483 | tig0024442:+46580 | None:intergenic |
| TTGATCGCATCTTTGTGGGT+GGG | 0.533344 | tig0024442:-48136 | Msa1417120:CDS |
| ATGAGAGCACGAGGATGAGA+AGG | 0.534810 | tig0024442:-52783 | Msa1417120:CDS |
| CTGCTGTTGGACTTTCTGCA+GGG | 0.535511 | tig0024442:-48290 | Msa1417120:intron |
| AGCACCTGCGATATCCCATA+TGG | 0.536316 | tig0024442:+51307 | None:intergenic |
| CTCCGTTTGGATTTGGACGA+GGG | 0.536853 | tig0024442:+45634 | None:intergenic |
| TGTACCCTTCAGATTGAGAA+GGG | 0.544685 | tig0024442:+52411 | None:intergenic |
| CATTGCAGGGAAAGCGAGGA+AGG | 0.546452 | tig0024442:+53470 | None:intergenic |
| AAAAGGCTACAAGGCATGCT+CGG | 0.555867 | tig0024442:-51073 | Msa1417120:intron |
| ATCCCTCGTCCAAATCCAAA+CGG | 0.557458 | tig0024442:-45636 | Msa1417120:CDS |
| GTCCAACAGCAGATAAGTTG+AGG | 0.557753 | tig0024442:+48301 | None:intergenic |
| AGATCCCCTTCTCAATCTGA+AGG | 0.559869 | tig0024442:-52416 | Msa1417120:CDS |
| GTGGGTGTTACACCGGTAGC+AGG | 0.560226 | tig0024442:+51968 | None:intergenic |
| ATCGATAATCACGCATATCA+CGG | 0.560428 | tig0024442:-53441 | Msa1417120:CDS |
| CAGTACAATTGGTGGAGCCG+AGG | 0.565358 | tig0024442:-48162 | Msa1417120:CDS |
| TATCGATGTCAGACATTGCA+GGG | 0.565666 | tig0024442:+53457 | None:intergenic |
| ATACTTCAGCCAAGTTCCCA+TGG | 0.566342 | tig0024442:-52814 | Msa1417120:intron |
| TGCATTGCTAGCTTCTTCAA+CGG | 0.568490 | tig0024442:+49996 | None:intergenic |
| TCTAGATCTAGATTCTCTCC+TGG | 0.569140 | tig0024442:+52448 | None:intergenic |
| ACAGAAAATAGCGTTGGAAG+TGG | 0.570517 | tig0024442:-46645 | Msa1417120:intron |
| AGTTAATTGTTCAGTAGTGA+CGG | 0.571985 | tig0024442:+46345 | None:intergenic |
| TTAAACATAAAACTTTGGTG+GGG | 0.573434 | tig0024442:+46582 | None:intergenic |
| CATATTTATCATCTCTGTGA+CGG | 0.575013 | tig0024442:+52722 | None:intergenic |
| TGCACATTCTAAACCAGAAG+AGG | 0.576168 | tig0024442:-46788 | Msa1417120:CDS |
| GATAAGTTGAGGTTTGCACT+TGG | 0.579003 | tig0024442:+48312 | None:intergenic |
| TATCATCTCTGTGACGGTCA+CGG | 0.582333 | tig0024442:+52728 | None:intergenic |
| ACGAGGATGAGAAGGAGAGA+TGG | 0.587416 | tig0024442:-52775 | Msa1417120:CDS |
| AGTACAATTGGTGGAGCCGA+GGG | 0.589688 | tig0024442:-48161 | Msa1417120:CDS |
| GTGAATGCATGAACACATCA+AGG | 0.590146 | tig0024442:+45052 | None:intergenic |
| AAGAAATATTGGAAGACATG+CGG | 0.592315 | tig0024442:-46306 | Msa1417120:CDS |
| GTGTACCCTTCAGATTGAGA+AGG | 0.592863 | tig0024442:+52410 | None:intergenic |
| GTCCAAACCTATCATAATCA+CGG | 0.596726 | tig0024442:+52650 | None:intergenic |
| AGAGGATAACATCTTTGCAC+GGG | 0.597699 | tig0024442:-46770 | Msa1417120:CDS |
| CAACCAACAGAAAATAGCGT+TGG | 0.604245 | tig0024442:-46651 | Msa1417120:intron |
| GCTCTCATGACCAGATCCAT+GGG | 0.605203 | tig0024442:+52798 | None:intergenic |
| ACTATATCAAAACTTCGAAG+AGG | 0.605870 | tig0024442:+47913 | None:intergenic |
| AAGAGGATAACATCTTTGCA+CGG | 0.608247 | tig0024442:-46771 | Msa1417120:CDS |
| CTAGAACTGCAGCTAATGAA+GGG | 0.610910 | tig0024442:+48346 | None:intergenic |
| AAAGATGCGATCAAGTCCCT+CGG | 0.611237 | tig0024442:+48145 | None:intergenic |
| CATGCTCGGCGAGTGTACGT+TGG | 0.614673 | tig0024442:-51059 | Msa1417120:CDS |
| TGAAACAGTGGGTGTTACAC+CGG | 0.617145 | tig0024442:+51961 | None:intergenic |
| TGAAGAAGCTAGCAATGCAA+TGG | 0.621824 | tig0024442:-49992 | Msa1417120:CDS |
| TCTAAATGGTAGGAAATTTG+GGG | 0.622587 | tig0024442:-45278 | Msa1417120:CDS |
| CAAAAGGAAGCACCTTGTCG+GGG | 0.624226 | tig0024442:+53409 | None:intergenic |
| ACCTGCTCGTTAGCAAAAGG+AGG | 0.626548 | tig0024442:+51029 | None:intergenic |
| CTCACCATATGGGATATCGC+AGG | 0.633429 | tig0024442:-51311 | Msa1417120:intron |
| AATGAAGGGTTATAGTCAGT+AGG | 0.644328 | tig0024442:+48360 | None:intergenic |
| GGTTTGGATTCAGAAATGGT+TGG | 0.645207 | tig0024442:-53614 | None:intergenic |
| CAGACATTGCAGGGAAAGCG+AGG | 0.648161 | tig0024442:+53466 | None:intergenic |
| GAGAATCTAGATCTAGATCA+CGG | 0.649000 | tig0024442:-52442 | Msa1417120:CDS |
| TGGGTACAAACCTGAAACAG+TGG | 0.649496 | tig0024442:+51949 | None:intergenic |
| GTGTTGCTGTGAGAGTTCGT+AGG | 0.651360 | tig0024442:-48383 | Msa1417120:CDS |
| GGTGTTACACCGGTAGCAGG+TGG | 0.655650 | tig0024442:+51971 | None:intergenic |
| GTAATGCAGGGCAAATGCTG+GGG | 0.655663 | tig0024442:-51369 | Msa1417120:intron |
| ATGATCGTGACAGAGATACA+AGG | 0.655782 | tig0024442:-52499 | Msa1417120:CDS |
| GATCCCCTTCTCAATCTGAA+GGG | 0.656525 | tig0024442:-52415 | Msa1417120:intron |
| GCTGTCTACAGGAATTGGAA+AGG | 0.661551 | tig0024442:-45610 | Msa1417120:intron |
| TGGTGCCATGTCAAAACCAG+AGG | 0.669121 | tig0024442:+51991 | None:intergenic |
| GACAGTTATAATCGGCAACG+TGG | 0.674875 | tig0024442:-52673 | Msa1417120:CDS |
| GGGTACAAACCTGAAACAGT+GGG | 0.675303 | tig0024442:+51950 | None:intergenic |
| AAAAGGAAGCACCTTGTCGG+GGG | 0.688425 | tig0024442:+53410 | None:intergenic |
| GATCTGGTCATGAGAGCACG+AGG | 0.693623 | tig0024442:-52792 | Msa1417120:CDS |
| CATCTCTGTGACGGTCACGG+TGG | 0.695589 | tig0024442:+52731 | None:intergenic |
| CAAGTCATGATTGCTATTGG+GGG | 0.700812 | tig0024442:-50398 | Msa1417120:CDS |
| GTACCCTTCAGATTGAGAAG+GGG | 0.702717 | tig0024442:+52412 | None:intergenic |
| CTAAATGGTAGGAAATTTGG+GGG | 0.702819 | tig0024442:-45277 | Msa1417120:CDS |
| AGGGATAACAACATTCACCA+AGG | 0.737659 | tig0024442:+45653 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAAAAAAAAAATGTAA+CGG | + | tig0024442:46544-46563 | None:intergenic | 10.0% |
| !!! | AAATATTTTAGAACTTAAAT+GGG | + | tig0024442:47641-47660 | None:intergenic | 10.0% |
| !!! | AAAATATTTTAGAACTTAAA+TGG | + | tig0024442:47642-47661 | None:intergenic | 10.0% |
| !! | TAAATTAAAAAGGATTATAT+AGG | - | tig0024442:48413-48432 | Msa1417120:intron | 10.0% |
| !! | TTATGACAAATTAAAATTAA+TGG | - | tig0024442:48846-48865 | Msa1417120:intron | 10.0% |
| !!! | TTTATTTTAAGAATAAGAAT+AGG | - | tig0024442:48936-48955 | Msa1417120:intron | 10.0% |
| !!! | AAAAATCCTTTTTTTGTTTT+AGG | - | tig0024442:45303-45322 | Msa1417120:CDS | 15.0% |
| !! | AACATAATTATGCTAATAAT+TGG | - | tig0024442:45436-45455 | Msa1417120:intron | 15.0% |
| !!! | TAAAACAAATATTGGTAATT+TGG | + | tig0024442:46310-46329 | None:intergenic | 15.0% |
| !! | AGTAAAAAAAAAAATGTAAC+GGG | + | tig0024442:46543-46562 | None:intergenic | 15.0% |
| !! | ATTCAATCATACTTAATATT+AGG | - | tig0024442:47082-47101 | Msa1417120:intron | 15.0% |
| !! | ATGATATATTTACTTTCATT+TGG | - | tig0024442:47106-47125 | Msa1417120:intron | 15.0% |
| !! | TGATATATTTACTTTCATTT+GGG | - | tig0024442:47107-47126 | Msa1417120:intron | 15.0% |
| !! | ATGAATTTATTACATAGAAT+TGG | + | tig0024442:47698-47717 | None:intergenic | 15.0% |
| !! | AATATAGCCTAATTTATTAA+TGG | + | tig0024442:48111-48130 | None:intergenic | 15.0% |
| !!! | TTTCTTTCAAATTTATTTTC+TGG | - | tig0024442:50917-50936 | Msa1417120:intron | 15.0% |
| !! | AAATAATTGGAAATAAAGAT+AGG | + | tig0024442:51138-51157 | None:intergenic | 15.0% |
| !! | AATAATTGAGTAATAATGAA+TGG | + | tig0024442:51945-51964 | None:intergenic | 15.0% |
| !! | CATTATATATGTAATAAACT+TGG | + | tig0024442:53523-53542 | None:intergenic | 15.0% |
| !!! | TTTAACTTGAAGTTAAAAAG+TGG | + | tig0024442:45573-45592 | None:intergenic | 20.0% |
| !!! | TATACTTGGATTATTTGTTT+TGG | - | tig0024442:45744-45763 | Msa1417120:intron | 20.0% |
| !!! | GATAAATATGAAGGTTTTAA+AGG | - | tig0024442:45916-45935 | Msa1417120:intron | 20.0% |
| !! | ATACTATACAATGTATGAAA+TGG | + | tig0024442:46082-46101 | None:intergenic | 20.0% |
| !! | TACGAAAGTAAAACAAATAT+TGG | + | tig0024442:46318-46337 | None:intergenic | 20.0% |
| !! | TTCTTCTATGAAAAAAAAAC+TGG | - | tig0024442:46497-46516 | Msa1417120:intron | 20.0% |
| !! | TATGAAAAAAAAACTGGAAT+AGG | - | tig0024442:46503-46522 | Msa1417120:intron | 20.0% |
| !! | ATGAAAAAAAAACTGGAATA+GGG | - | tig0024442:46504-46523 | Msa1417120:intron | 20.0% |
| !! | AATTAAAAATTGTACTTGCA+TGG | + | tig0024442:46569-46588 | None:intergenic | 20.0% |
| !! | GTGTTAATTTATGCATTTAT+AGG | - | tig0024442:47490-47509 | Msa1417120:intron | 20.0% |
| !!! | TCTTTGTTTTTTGTTCTAAA+AGG | - | tig0024442:47535-47554 | Msa1417120:intron | 20.0% |
| !! | AGATTTAAGAATCATAGTTA+TGG | - | tig0024442:47775-47794 | Msa1417120:intron | 20.0% |
| !! | AACAATTACATTGTGTTAAT+TGG | + | tig0024442:48134-48153 | None:intergenic | 20.0% |
| !! | TCTAATATCAAAACTTATGA+TGG | + | tig0024442:48708-48727 | None:intergenic | 20.0% |
| !! | TTCTTAAAATAAAACAGTGA+AGG | + | tig0024442:48929-48948 | None:intergenic | 20.0% |
| !!! | CGAGTTTTAATTATGTAATT+TGG | + | tig0024442:49232-49251 | None:intergenic | 20.0% |
| !!! | ATTTTTCTCATTAAATGAGA+GGG | + | tig0024442:49558-49577 | None:intergenic | 20.0% |
| !! | ACTTTACTTATCAAATTTCA+AGG | + | tig0024442:49791-49810 | None:intergenic | 20.0% |
| !!! | TCTTCCTTATTTGAAATATT+TGG | - | tig0024442:49966-49985 | Msa1417120:intron | 20.0% |
| !!! | CTTCCTTATTTGAAATATTT+GGG | - | tig0024442:49967-49986 | Msa1417120:intron | 20.0% |
| !!! | TTCCTTATTTGAAATATTTG+GGG | - | tig0024442:49968-49987 | Msa1417120:intron | 20.0% |
| !! | ATTGATAAGTCAAATTGTAT+GGG | + | tig0024442:50084-50103 | None:intergenic | 20.0% |
| !!! | ACCTTGCAATTTTTTTTTTT+TGG | - | tig0024442:50851-50870 | Msa1417120:intron | 20.0% |
| !!! | CCTTGCAATTTTTTTTTTTT+GGG | - | tig0024442:50852-50871 | Msa1417120:intron | 20.0% |
| !!! | CTTGCAATTTTTTTTTTTTG+GGG | - | tig0024442:50853-50872 | Msa1417120:intron | 20.0% |
| !!! | ATTTTCTGGTTAATCTTTTT+AGG | - | tig0024442:50931-50950 | Msa1417120:intron | 20.0% |
| !! | TATAGATAATCAAAATGCAT+CGG | + | tig0024442:51740-51759 | None:intergenic | 20.0% |
| !! | TGACAAAATGAAAATAAAGA+GGG | + | tig0024442:52179-52198 | None:intergenic | 20.0% |
| !! | TTGACAAAATGAAAATAAAG+AGG | + | tig0024442:52180-52199 | None:intergenic | 20.0% |
| !! | TTATATAGTTAATTCTCTCT+TGG | - | tig0024442:52619-52638 | Msa1417120:intron | 20.0% |
| !! | TATATAGTTAATTCTCTCTT+GGG | - | tig0024442:52620-52639 | Msa1417120:intron | 20.0% |
| !! | GTTGTAAAACAAAAATTTGT+TGG | - | tig0024442:52678-52697 | Msa1417120:CDS | 20.0% |
| !! | TTAAAAGTTTCAAATCACTA+TGG | + | tig0024442:53169-53188 | None:intergenic | 20.0% |
| !!! | AGTGATTTGAAACTTTTAAA+TGG | - | tig0024442:53170-53189 | Msa1417120:intron | 20.0% |
| !!! | GTGATTTGAAACTTTTAAAT+GGG | - | tig0024442:53171-53190 | Msa1417120:intron | 20.0% |
| !!! | ATACTATGATATTTTTCTTC+TGG | + | tig0024442:53399-53418 | None:intergenic | 20.0% |
| !! | AGAAGAAAAATATCATAGTA+TGG | - | tig0024442:53398-53417 | Msa1417120:intron | 20.0% |
| ! | TTTCTATCCATAATCGTATA+CGG | - | tig0024442:45263-45282 | Msa1417120:CDS | 25.0% |
| !! | CTTCAAGTTAAAATCAATTC+TGG | - | tig0024442:45581-45600 | Msa1417120:intron | 25.0% |
| ! | ATGTATATTGCTTGTATACT+TGG | - | tig0024442:45730-45749 | Msa1417120:intron | 25.0% |
| ! | AGAAAATCTAATCTGAAAAG+AGG | + | tig0024442:46019-46038 | None:intergenic | 25.0% |
| ! | TTAATATCACACAAGAACAA+TGG | + | tig0024442:46262-46281 | None:intergenic | 25.0% |
| ! | AGCATAAACACTTTAAACTA+AGG | + | tig0024442:46800-46819 | None:intergenic | 25.0% |
| ! | TCAGTAAATCAAACAAATGA+GGG | + | tig0024442:47165-47184 | None:intergenic | 25.0% |
| ! | TTCAGTAAATCAAACAAATG+AGG | + | tig0024442:47166-47185 | None:intergenic | 25.0% |
| ! | TTATTAAGAGTTAGTAATGC+AGG | - | tig0024442:47243-47262 | Msa1417120:intron | 25.0% |
| ! | TATTAAGAGTTAGTAATGCA+GGG | - | tig0024442:47244-47263 | Msa1417120:intron | 25.0% |
| ! | AACTAAAATAGCTGAAAATC+TGG | + | tig0024442:47367-47386 | None:intergenic | 25.0% |
| ! | TAAATTAACACAAACGTATC+AGG | + | tig0024442:47481-47500 | None:intergenic | 25.0% |
| ! | TTGGAGTAATTACTATTAGT+AGG | - | tig0024442:47838-47857 | Msa1417120:intron | 25.0% |
| ! | TGGAGTAATTACTATTAGTA+GGG | - | tig0024442:47839-47858 | Msa1417120:intron | 25.0% |
| ! | AAGAACATAAATAGTACAAC+TGG | + | tig0024442:47979-47998 | None:intergenic | 25.0% |
| !!! | CATGCTTCTTTTTGTTTTTT+GGG | - | tig0024442:48000-48019 | Msa1417120:intron | 25.0% |
| !!! | ATGCTTCTTTTTGTTTTTTG+GGG | - | tig0024442:48001-48020 | Msa1417120:intron | 25.0% |
| ! | TGTATGTATGTATCTATGTA+CGG | - | tig0024442:48497-48516 | Msa1417120:intron | 25.0% |
| ! | TTTAGATGGAATAGTATTTG+AGG | - | tig0024442:48657-48676 | Msa1417120:intron | 25.0% |
| ! | TAAAATGGAAATTCAAGAGA+TGG | + | tig0024442:48778-48797 | None:intergenic | 25.0% |
| ! | CCTTAAGTTATGACTTAAAA+TGG | + | tig0024442:48793-48812 | None:intergenic | 25.0% |
| !!! | CCATTTTAAGTCATAACTTA+AGG | - | tig0024442:48790-48809 | Msa1417120:intron | 25.0% |
| !! | GCTAAAAAGAAATGTAGTTT+TGG | + | tig0024442:49048-49067 | None:intergenic | 25.0% |
| ! | AACTCCTCTATCATATTAAT+GGG | - | tig0024442:49352-49371 | Msa1417120:intron | 25.0% |
| !! | TTTTTCTCATTAAATGAGAG+GGG | + | tig0024442:49557-49576 | None:intergenic | 25.0% |
| !! | CATTTTTCTCATTAAATGAG+AGG | + | tig0024442:49559-49578 | None:intergenic | 25.0% |
| ! | CTCTCATTTAATGAGAAAAA+TGG | - | tig0024442:49557-49576 | Msa1417120:intron | 25.0% |
| ! | AATGAGAAAAATGGTAAATC+AGG | - | tig0024442:49566-49585 | Msa1417120:intron | 25.0% |
| ! | CTGAATTAATTGAAGATTAG+GGG | + | tig0024442:49610-49629 | None:intergenic | 25.0% |
| ! | GCTGAATTAATTGAAGATTA+GGG | + | tig0024442:49611-49630 | None:intergenic | 25.0% |
| !!! | TCAACAGAAATAGAAGTATT+AGG | + | tig0024442:49820-49839 | None:intergenic | 25.0% |
| !!! | CAGTAGTTTTATTTTATCAC+AGG | + | tig0024442:49858-49877 | None:intergenic | 25.0% |
| !! | AAAATCAATGATTTGGAGTT+CGG | + | tig0024442:49947-49966 | None:intergenic | 25.0% |
| ! | AAGGAAGAAAATCAATGATT+TGG | + | tig0024442:49954-49973 | None:intergenic | 25.0% |
| ! | TTGATAAGTCAAATTGTATG+GGG | + | tig0024442:50083-50102 | None:intergenic | 25.0% |
| ! | CATTGATAAGTCAAATTGTA+TGG | + | tig0024442:50085-50104 | None:intergenic | 25.0% |
| !!! | TTTAGTGCTCTAAAACATAT+TGG | + | tig0024442:50193-50212 | None:intergenic | 25.0% |
| ! | AACATGCATATAAACATCAA+AGG | + | tig0024442:50375-50394 | None:intergenic | 25.0% |
| !! | GTTTATATGCATGTTTTACA+TGG | - | tig0024442:50380-50399 | Msa1417120:intron | 25.0% |
| ! | GTAAAGTAAATCAATAAGCA+TGG | + | tig0024442:50641-50660 | None:intergenic | 25.0% |
| ! | ATAGTTAGAGATAAAGAAAC+AGG | - | tig0024442:50730-50749 | Msa1417120:intron | 25.0% |
| ! | AAAGAAACAGGAAATTCTAA+AGG | - | tig0024442:50742-50761 | Msa1417120:intron | 25.0% |
| ! | CCCAAAAAAAAAAAATTGCA+AGG | + | tig0024442:50855-50874 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTGGGGCATT+TGG | - | tig0024442:50860-50879 | Msa1417120:intron | 25.0% |
| !! | ATGTTTTATCTCCCATTTTA+AGG | + | tig0024442:50997-51016 | None:intergenic | 25.0% |
| ! | GAAATAAAGATAGGAAGTAA+TGG | + | tig0024442:51129-51148 | None:intergenic | 25.0% |
| ! | CGGAAGTAATAGAAAATAAT+TGG | + | tig0024442:51151-51170 | None:intergenic | 25.0% |
| !! | ATTATTTTCTATTACTTCCG+TGG | - | tig0024442:51151-51170 | Msa1417120:intron | 25.0% |
| ! | CATATTGAAGGAAGAAAAAT+TGG | + | tig0024442:51189-51208 | None:intergenic | 25.0% |
| ! | ACATGATTCATAGAAATAGA+AGG | - | tig0024442:51224-51243 | Msa1417120:intron | 25.0% |
| ! | CATGATTCATAGAAATAGAA+GGG | - | tig0024442:51225-51244 | Msa1417120:intron | 25.0% |
| !!! | CTACTTTTAGAAACCTTAAT+CGG | - | tig0024442:51370-51389 | Msa1417120:intron | 25.0% |
| ! | TTAAGATTAATCAGCAAGAA+GGG | + | tig0024442:51474-51493 | None:intergenic | 25.0% |
| ! | ATTAAGATTAATCAGCAAGA+AGG | + | tig0024442:51475-51494 | None:intergenic | 25.0% |
| ! | TGAATGATGTATGTATCTAA+GGG | + | tig0024442:51499-51518 | None:intergenic | 25.0% |
| ! | ATGAATGATGTATGTATCTA+AGG | + | tig0024442:51500-51519 | None:intergenic | 25.0% |
| ! | TTAGATACATACATCATTCA+TGG | - | tig0024442:51499-51518 | Msa1417120:intron | 25.0% |
| !!! | CTGTTAATTTTGTTTGCTTT+TGG | - | tig0024442:51573-51592 | Msa1417120:intron | 25.0% |
| ! | TTAAACATAAAACTTTGGTG+GGG | + | tig0024442:52046-52065 | None:intergenic | 25.0% |
| ! | GTTAAACATAAAACTTTGGT+GGG | + | tig0024442:52047-52066 | None:intergenic | 25.0% |
| ! | AGTTAAACATAAAACTTTGG+TGG | + | tig0024442:52048-52067 | None:intergenic | 25.0% |
| ! | CTCAGTTAAACATAAAACTT+TGG | + | tig0024442:52051-52070 | None:intergenic | 25.0% |
| !!! | CAAAGTTTTATGTTTAACTG+AGG | - | tig0024442:52049-52068 | Msa1417120:intron | 25.0% |
| ! | GACAAAATGAAAATAAAGAG+GGG | + | tig0024442:52178-52197 | None:intergenic | 25.0% |
| !! | CATTTTGTCAAAATTTCCTA+TGG | - | tig0024442:52189-52208 | Msa1417120:intron | 25.0% |
| ! | ACTGAACAATTAACTGATAA+TGG | - | tig0024442:52288-52307 | Msa1417120:intron | 25.0% |
| ! | TGGAGAATATGAAGAAATAT+TGG | - | tig0024442:52308-52327 | Msa1417120:intron | 25.0% |
| !! | CTCATATATTACATTTTCTC+TGG | - | tig0024442:52427-52446 | Msa1417120:CDS | 25.0% |
| ! | TTTGATCGACATTTATAGTT+TGG | - | tig0024442:52561-52580 | Msa1417120:intron | 25.0% |
| !! | TATTTTACTGCAAGATCAAT+TGG | - | tig0024442:52853-52872 | Msa1417120:intron | 25.0% |
| ! | TATAATTTCTTGCACCTTAT+TGG | - | tig0024442:52937-52956 | Msa1417120:intron | 25.0% |
| ! | TAGTTGTTTAATTGTGGTTT+CGG | - | tig0024442:53262-53281 | Msa1417120:intron | 25.0% |
| AACACACGAAGAATCAATTT+AGG | - | tig0024442:45100-45119 | Msa1417120:three_prime_UTR | 30.0% | |
| ACACACGAAGAATCAATTTA+GGG | - | tig0024442:45101-45120 | Msa1417120:three_prime_UTR | 30.0% | |
| TAGCTAAACTATTGTGCAAA+AGG | + | tig0024442:45235-45254 | None:intergenic | 30.0% | |
| CAATGGCCTAAAACAAAAAA+AGG | + | tig0024442:45312-45331 | None:intergenic | 30.0% | |
| AACGTAATCAAAGCTAACAA+TGG | + | tig0024442:45329-45348 | None:intergenic | 30.0% | |
| GAATTTAAGTGACTTGATTC+TGG | - | tig0024442:45489-45508 | Msa1417120:intron | 30.0% | |
| CAAGTTAAAATCAATTCTGG+AGG | - | tig0024442:45584-45603 | Msa1417120:intron | 30.0% | |
| CATATTTATCATCTCTGTGA+CGG | + | tig0024442:45906-45925 | None:intergenic | 30.0% | |
| CACAGAGATGATAAATATGA+AGG | - | tig0024442:45907-45926 | Msa1417120:intron | 30.0% | |
| !!! | TATGAAGGTTTTAAAGGAAG+AGG | - | tig0024442:45922-45941 | Msa1417120:intron | 30.0% |
| GCAGATATGACAGTTATAAT+CGG | - | tig0024442:45944-45963 | Msa1417120:intron | 30.0% | |
| ! | GTATAGTATGTTCCTTTTGT+AGG | - | tig0024442:46093-46112 | Msa1417120:intron | 30.0% |
| ATAGTCATTATGCCTACAAA+AGG | + | tig0024442:46108-46127 | None:intergenic | 30.0% | |
| TGTGATATTAACTATCTCCT+CGG | - | tig0024442:46271-46290 | Msa1417120:intron | 30.0% | |
| TTACCAACGCAATTTATAAG+TGG | - | tig0024442:46357-46376 | Msa1417120:intron | 30.0% | |
| ! | CAATTTATAAGTGGACCTTT+TGG | - | tig0024442:46366-46385 | Msa1417120:intron | 30.0% |
| TTACTAGTTAACAAGCCAAA+AGG | + | tig0024442:46384-46403 | None:intergenic | 30.0% | |
| TATGCACTTTATCTGTTAGA+AGG | - | tig0024442:46409-46428 | Msa1417120:intron | 30.0% | |
| GAATCTACAAAAGAGTGAAA+GGG | + | tig0024442:46480-46499 | None:intergenic | 30.0% | |
| AGAATCTACAAAAGAGTGAA+AGG | + | tig0024442:46481-46500 | None:intergenic | 30.0% | |
| ! | ATGTAGAGCACTAAATTAAG+TGG | + | tig0024442:46703-46722 | None:intergenic | 30.0% |
| AATTTAGTGCTCTACATGTA+TGG | - | tig0024442:46706-46725 | Msa1417120:intron | 30.0% | |
| ATTTAGTGCTCTACATGTAT+GGG | - | tig0024442:46707-46726 | Msa1417120:intron | 30.0% | |
| TGCATAATACAGACTGAATT+GGG | + | tig0024442:46774-46793 | None:intergenic | 30.0% | |
| ATGCATAATACAGACTGAAT+TGG | + | tig0024442:46775-46794 | None:intergenic | 30.0% | |
| !!! | TTGTGTCTGGCTTATTTTTA+TGG | - | tig0024442:46905-46924 | Msa1417120:intron | 30.0% |
| !!! | TCTGGCTTATTTTTATGGTT+GGG | - | tig0024442:46910-46929 | Msa1417120:intron | 30.0% |
| ! | ATATGGTGAGAAATTTTGTG+TGG | + | tig0024442:47304-47323 | None:intergenic | 30.0% |
| ACACAAAATTTCTCACCATA+TGG | - | tig0024442:47303-47322 | Msa1417120:intron | 30.0% | |
| CACAAAATTTCTCACCATAT+GGG | - | tig0024442:47304-47323 | Msa1417120:intron | 30.0% | |
| TAAAATAGCTGAAAATCTGG+TGG | + | tig0024442:47364-47383 | None:intergenic | 30.0% | |
| TGATTTCATTTGTCACAGAT+TGG | - | tig0024442:47403-47422 | Msa1417120:intron | 30.0% | |
| !!! | TTTTGTTCTAAAAGGCTACA+AGG | - | tig0024442:47543-47562 | Msa1417120:intron | 30.0% |
| AATCATAGTTATGGCAACTT+GGG | - | tig0024442:47784-47803 | Msa1417120:intron | 30.0% | |
| TACTATTAGTAGGGTTATAC+TGG | - | tig0024442:47848-47867 | Msa1417120:intron | 30.0% | |
| CATCTATAATGAATGCTATC+TGG | - | tig0024442:47872-47891 | Msa1417120:CDS | 30.0% | |
| ATAGTACAACTGGTACATAA+AGG | + | tig0024442:47969-47988 | None:intergenic | 30.0% | |
| CCAAAAAACAAAAAGAAGCA+TGG | + | tig0024442:48002-48021 | None:intergenic | 30.0% | |
| !!! | CCATGCTTCTTTTTGTTTTT+TGG | - | tig0024442:47999-48018 | Msa1417120:intron | 30.0% |
| GCCTGTTCCATTAATAAATT+AGG | - | tig0024442:48101-48120 | Msa1417120:CDS | 30.0% | |
| GCCTAATTTATTAATGGAAC+AGG | + | tig0024442:48105-48124 | None:intergenic | 30.0% | |
| !! | AATTGTTTCCCTTTGCTTTT+CGG | - | tig0024442:48147-48166 | Msa1417120:CDS | 30.0% |
| ! | AATCGATAACTTGTGAAAGA+AGG | - | tig0024442:48336-48355 | Msa1417120:CDS | 30.0% |
| TTAAGTCATAACTTAAGGCT+TGG | - | tig0024442:48795-48814 | Msa1417120:intron | 30.0% | |
| TAAGTCATAACTTAAGGCTT+GGG | - | tig0024442:48796-48815 | Msa1417120:intron | 30.0% | |
| AGGAAGTTTGTGGATTTATT+GGG | + | tig0024442:48909-48928 | None:intergenic | 30.0% | |
| AAGGAAGTTTGTGGATTTAT+TGG | + | tig0024442:48910-48929 | None:intergenic | 30.0% | |
| !! | AAAAGAAGAGTGTTGTTCAT+TGG | + | tig0024442:48962-48981 | None:intergenic | 30.0% |
| TTGGTCAAATCATTTCTTGA+GGG | + | tig0024442:49005-49024 | None:intergenic | 30.0% | |
| TAAACAACAATTCCTTACCT+TGG | + | tig0024442:49024-49043 | None:intergenic | 30.0% | |
| GACATTCTTATGGTAGAAAT+TGG | + | tig0024442:49127-49146 | None:intergenic | 30.0% | |
| GGTTTAATGTGACATTCTTA+TGG | + | tig0024442:49137-49156 | None:intergenic | 30.0% | |
| ACCAAAACAAACCTCAAATA+TGG | - | tig0024442:49154-49173 | Msa1417120:intron | 30.0% | |
| CAACTCCTCTATCATATTAA+TGG | - | tig0024442:49351-49370 | Msa1417120:intron | 30.0% | |
| ATGTTGGATGTAAAGAAGAA+TGG | + | tig0024442:49436-49455 | None:intergenic | 30.0% | |
| ! | TTTTCTCATTAAATGAGAGG+GGG | + | tig0024442:49556-49575 | None:intergenic | 30.0% |
| AATCAGGATAGTTACATTCA+TGG | - | tig0024442:49582-49601 | Msa1417120:intron | 30.0% | |
| GGCTGAATTAATTGAAGATT+AGG | + | tig0024442:49612-49631 | None:intergenic | 30.0% | |
| GAAGAATTCATTCTGTGAAT+AGG | + | tig0024442:49666-49685 | None:intergenic | 30.0% | |
| ATATGTGTTGTAAGAAAAGG+GGG | + | tig0024442:49768-49787 | None:intergenic | 30.0% | |
| GATATGTGTTGTAAGAAAAG+GGG | + | tig0024442:49769-49788 | None:intergenic | 30.0% | |
| GGATATGTGTTGTAAGAAAA+GGG | + | tig0024442:49770-49789 | None:intergenic | 30.0% | |
| AGGATATGTGTTGTAAGAAA+AGG | + | tig0024442:49771-49790 | None:intergenic | 30.0% | |
| GATAAAATAAAACTACTGCG+TGG | - | tig0024442:49860-49879 | Msa1417120:intron | 30.0% | |
| CACCCCAAATATTTCAAATA+AGG | + | tig0024442:49973-49992 | None:intergenic | 30.0% | |
| AAAATGGGGTTCAAATTGAT+TGG | + | tig0024442:50058-50077 | None:intergenic | 30.0% | |
| AAATTGTATGGGGGAAAAAT+GGG | + | tig0024442:50073-50092 | None:intergenic | 30.0% | |
| TGATAAGTCAAATTGTATGG+GGG | + | tig0024442:50082-50101 | None:intergenic | 30.0% | |
| TTGCTTTCTGCATATTGTTT+CGG | - | tig0024442:50121-50140 | Msa1417120:intron | 30.0% | |
| ! | TGTTTTTCTTGTGATATCTC+AGG | - | tig0024442:50219-50238 | Msa1417120:intron | 30.0% |
| ! | GTTTTTCTTGTGATATCTCA+GGG | - | tig0024442:50220-50239 | Msa1417120:intron | 30.0% |
| CATATAAACATCAAAGGATG+TGG | + | tig0024442:50369-50388 | None:intergenic | 30.0% | |
| ! | ACATGGATTTTTCATAATGC+TGG | - | tig0024442:50397-50416 | Msa1417120:CDS | 30.0% |
| TGTACTTCAGTAAAGTAGTA+TGG | + | tig0024442:50518-50537 | None:intergenic | 30.0% | |
| GTTTACTCTTCTATGTATTC+TGG | - | tig0024442:50595-50614 | Msa1417120:intron | 30.0% | |
| ACTATATCAAAACTTCGAAG+AGG | + | tig0024442:50715-50734 | None:intergenic | 30.0% | |
| ! | ACAGGAAATTCTAAAGGATA+TGG | - | tig0024442:50748-50767 | Msa1417120:intron | 30.0% |
| ! | ACAAAGCTTTATACTCTGTT+AGG | + | tig0024442:50892-50911 | None:intergenic | 30.0% |
| ! | GAGATAAAACATTGACTGTA+AGG | - | tig0024442:51005-51024 | Msa1417120:intron | 30.0% |
| TTTCTATGAATCATGTTCTG+TGG | + | tig0024442:51220-51239 | None:intergenic | 30.0% | |
| AGGGAGAAATTTAAATTGAG+AGG | - | tig0024442:51244-51263 | Msa1417120:intron | 30.0% | |
| !! | CAGTAATATCCCTTTTAAGT+TGG | - | tig0024442:51319-51338 | Msa1417120:CDS | 30.0% |
| ACTAATATTGAAGCTACTAG+AGG | + | tig0024442:51349-51368 | None:intergenic | 30.0% | |
| TAAGATTAATCAGCAAGAAG+GGG | + | tig0024442:51473-51492 | None:intergenic | 30.0% | |
| ATTCATTGTGATGTACTTGT+CGG | - | tig0024442:51810-51829 | Msa1417120:intron | 30.0% | |
| AAATGAAAATAAAGAGGGGA+AGG | + | tig0024442:52174-52193 | None:intergenic | 30.0% | |
| ATCAAATTGTTAACAGCCAT+AGG | + | tig0024442:52208-52227 | None:intergenic | 30.0% | |
| AGTTAATTGTTCAGTAGTGA+CGG | + | tig0024442:52283-52302 | None:intergenic | 30.0% | |
| AAGAAATATTGGAAGACATG+CGG | - | tig0024442:52319-52338 | Msa1417120:intron | 30.0% | |
| CAGAAAATGGCAAAGTAATA+TGG | + | tig0024442:52387-52406 | None:intergenic | 30.0% | |
| ! | TTACATTTTCTCTGGTTAAG+TGG | - | tig0024442:52435-52454 | Msa1417120:CDS | 30.0% |
| ! | TACATTTTCTCTGGTTAAGT+GGG | - | tig0024442:52436-52455 | Msa1417120:CDS | 30.0% |
| ! | CAATATCTCATCCAAGTTTT+TGG | - | tig0024442:52493-52512 | Msa1417120:CDS | 30.0% |
| ! | AGCATAGTTTTCCAAAAACT+TGG | + | tig0024442:52507-52526 | None:intergenic | 30.0% |
| TCTAACAAATAAAGTATGCG+AGG | - | tig0024442:53221-53240 | Msa1417120:intron | 30.0% | |
| CACAATTAAACAACTACGTT+TGG | + | tig0024442:53258-53277 | None:intergenic | 30.0% | |
| CAAACGTAGTTGTTTAATTG+TGG | - | tig0024442:53256-53275 | Msa1417120:intron | 30.0% | |
| ! | CAAAAAATGCTCTAAATGGT+AGG | - | tig0024442:53337-53356 | Msa1417120:intron | 30.0% |
| CTCTAAATGGTAGGAAATTT+GGG | - | tig0024442:53346-53365 | Msa1417120:intron | 30.0% | |
| TCTAAATGGTAGGAAATTTG+GGG | - | tig0024442:53347-53366 | Msa1417120:intron | 30.0% | |
| ! | TATGATTTGTAACCGATTGT+AGG | - | tig0024442:53423-53442 | Msa1417120:CDS | 30.0% |
| ! | ATGATTTGTAACCGATTGTA+GGG | - | tig0024442:53424-53443 | Msa1417120:CDS | 30.0% |
| ATTATATCTCTCCCTACAAT+CGG | + | tig0024442:53438-53457 | None:intergenic | 30.0% | |
| AAAACTTGAGTGACAAAAAG+TGG | + | tig0024442:53483-53502 | None:intergenic | 30.0% | |
| CACTGGAAAATAACGTTTAT+TGG | - | tig0024442:53593-53612 | Msa1417120:CDS | 30.0% | |
| ATCGATAATCACGCATATCA+CGG | - | tig0024442:45184-45203 | Msa1417120:three_prime_UTR | 35.0% | |
| TCGAAAACCGTATACGATTA+TGG | + | tig0024442:45273-45292 | None:intergenic | 35.0% | |
| GCTAATAATTGGTGTGTGTT+TGG | - | tig0024442:45447-45466 | Msa1417120:intron | 35.0% | |
| !! | CACTCCTCTAGAATAAATGT+CGG | - | tig0024442:45654-45673 | Msa1417120:CDS | 35.0% |
| GGTTAATCTCTTGATAGAGT+TGG | - | tig0024442:45765-45784 | Msa1417120:intron | 35.0% | |
| GTCCAAACCTATCATAATCA+CGG | + | tig0024442:45978-45997 | None:intergenic | 35.0% | |
| AGAGATACAAGGAACAGATA+TGG | - | tig0024442:46137-46156 | Msa1417120:intron | 35.0% | |
| GAGAATCTAGATCTAGATCA+CGG | - | tig0024442:46183-46202 | Msa1417120:intron | 35.0% | |
| ! | ATAAATTGCGTTGGTAAGTG+AGG | + | tig0024442:46354-46373 | None:intergenic | 35.0% |
| !! | TCCTTTTGCTGTAGACAAAT+CGG | + | tig0024442:46614-46633 | None:intergenic | 35.0% |
| GAGCACTAAATTAAGTGGTT+GGG | + | tig0024442:46698-46717 | None:intergenic | 35.0% | |
| ! | AGAGCACTAAATTAAGTGGT+TGG | + | tig0024442:46699-46718 | None:intergenic | 35.0% |
| CTAGCATACGAAATTCAATG+AGG | + | tig0024442:46735-46754 | None:intergenic | 35.0% | |
| GCATAATACAGACTGAATTG+GGG | + | tig0024442:46773-46792 | None:intergenic | 35.0% | |
| !!! | GTCTGGCTTATTTTTATGGT+TGG | - | tig0024442:46909-46928 | Msa1417120:intron | 35.0% |
| ! | ATTTTTATGGTTGGGTGAGA+AGG | - | tig0024442:46918-46937 | Msa1417120:intron | 35.0% |
| ACACCCTGTATCATATTCAA+TGG | - | tig0024442:46982-47001 | Msa1417120:intron | 35.0% | |
| CAGCCATTGAATATGATACA+GGG | + | tig0024442:46988-47007 | None:intergenic | 35.0% | |
| GAATCATAGTTATGGCAACT+TGG | - | tig0024442:47783-47802 | Msa1417120:intron | 35.0% | |
| ATCATAGTTATGGCAACTTG+GGG | - | tig0024442:47785-47804 | Msa1417120:intron | 35.0% | |
| ATTGCAGCTTGCACTTAATT+TGG | - | tig0024442:47819-47838 | Msa1417120:intron | 35.0% | |
| ! | TATCTGGAATTGATCTTGTC+AGG | - | tig0024442:47888-47907 | Msa1417120:CDS | 35.0% |
| ! | ATCTGGAATTGATCTTGTCA+GGG | - | tig0024442:47889-47908 | Msa1417120:CDS | 35.0% |
| !!! | CTTCTTTTTGTTTTTTGGGG+CGG | - | tig0024442:48004-48023 | Msa1417120:intron | 35.0% |
| !!! | TTCTTTTTGTTTTTTGGGGC+GGG | - | tig0024442:48005-48024 | Msa1417120:intron | 35.0% |
| CAACAATTCCGAAAAGCAAA+GGG | + | tig0024442:48158-48177 | None:intergenic | 35.0% | |
| TCAACAATTCCGAAAAGCAA+AGG | + | tig0024442:48159-48178 | None:intergenic | 35.0% | |
| CACAACTACTGGTAATTCAA+AGG | + | tig0024442:48379-48398 | None:intergenic | 35.0% | |
| TTCAAGATTTCCTGACTTAC+AGG | - | tig0024442:48544-48563 | Msa1417120:intron | 35.0% | |
| TGAGAAGAAATTTGCGTTTG+TGG | - | tig0024442:48597-48616 | Msa1417120:intron | 35.0% | |
| AAAACAGTGAAGGAAGTTTG+TGG | + | tig0024442:48919-48938 | None:intergenic | 35.0% | |
| CTTGGTCAAATCATTTCTTG+AGG | + | tig0024442:49006-49025 | None:intergenic | 35.0% | |
| CTCAAGAAATGATTTGACCA+AGG | - | tig0024442:49004-49023 | Msa1417120:intron | 35.0% | |
| GAAATGATTTGACCAAGGTA+AGG | - | tig0024442:49009-49028 | Msa1417120:intron | 35.0% | |
| ATCACTGTTACATGTGAAGA+TGG | + | tig0024442:49100-49119 | None:intergenic | 35.0% | |
| TTCTTATGGTAGAAATTGGC+AGG | + | tig0024442:49123-49142 | None:intergenic | 35.0% | |
| !! | GCCATATTTGAGGTTTGTTT+TGG | + | tig0024442:49158-49177 | None:intergenic | 35.0% |
| TCTGTTCTCAATGTTGTCTT+TGG | - | tig0024442:49254-49273 | Msa1417120:intron | 35.0% | |
| CTGTTCTCAATGTTGTCTTT+GGG | - | tig0024442:49255-49274 | Msa1417120:intron | 35.0% | |
| !! | GTTGTCTTTGGGATATCTTT+AGG | - | tig0024442:49266-49285 | Msa1417120:intron | 35.0% |
| AGTTGTTGAATGAGTTGCAT+GGG | + | tig0024442:49336-49355 | None:intergenic | 35.0% | |
| TGCACCCATTAATATGATAG+AGG | + | tig0024442:49359-49378 | None:intergenic | 35.0% | |
| ! | TCATATTAATGGGTGCATGT+TGG | - | tig0024442:49362-49381 | Msa1417120:intron | 35.0% |
| ! | CATATTAATGGGTGCATGTT+GGG | - | tig0024442:49363-49382 | Msa1417120:intron | 35.0% |
| !! | TGGGAATTGTTGCTTTATTG+AGG | - | tig0024442:49382-49401 | Msa1417120:intron | 35.0% |
| !! | GGGAATTGTTGCTTTATTGA+GGG | - | tig0024442:49383-49402 | Msa1417120:intron | 35.0% |
| TTGGATGTAAAGAAGAATGG+AGG | + | tig0024442:49433-49452 | None:intergenic | 35.0% | |
| GCATGTGTCGAATAAATGTA+AGG | + | tig0024442:49509-49528 | None:intergenic | 35.0% | |
| !! | CATGCTCGAAAGTATTTGAA+TGG | - | tig0024442:49524-49543 | Msa1417120:intron | 35.0% |
| GAATTCATTCTGTGAATAGG+AGG | + | tig0024442:49663-49682 | None:intergenic | 35.0% | |
| TTCATCTTCTCTCTATGCAA+AGG | - | tig0024442:49719-49738 | Msa1417120:intron | 35.0% | |
| TCATCTTCTCTCTATGCAAA+GGG | - | tig0024442:49720-49739 | Msa1417120:intron | 35.0% | |
| GTTCAAATTGATTGGATTCG+CGG | + | tig0024442:50050-50069 | None:intergenic | 35.0% | |
| AATTGTATGGGGGAAAAATG+GGG | + | tig0024442:50072-50091 | None:intergenic | 35.0% | |
| CAAATTGTATGGGGGAAAAA+TGG | + | tig0024442:50074-50093 | None:intergenic | 35.0% | |
| GACTTATCAATGTAATGAGC+TGG | - | tig0024442:50093-50112 | Msa1417120:intron | 35.0% | |
| ! | ACTCTGGGCTATTTCATTAA+TGG | + | tig0024442:50162-50181 | None:intergenic | 35.0% |
| !! | TGCTCTAAAACATATTGGAC+GGG | + | tig0024442:50188-50207 | None:intergenic | 35.0% |
| !! | GTGCTCTAAAACATATTGGA+CGG | + | tig0024442:50189-50208 | None:intergenic | 35.0% |
| AATGAAGGGTTATAGTCAGT+AGG | + | tig0024442:50268-50287 | None:intergenic | 35.0% | |
| ! | AGAGAATTGCTTCAAGCTTT+TGG | - | tig0024442:50542-50561 | Msa1417120:intron | 35.0% |
| ! | GAGAATTGCTTCAAGCTTTT+GGG | - | tig0024442:50543-50562 | Msa1417120:intron | 35.0% |
| !! | AGCTTTTGGGTATGATATCA+TGG | - | tig0024442:50556-50575 | Msa1417120:intron | 35.0% |
| TATCACAACAGAAATGTGTC+AGG | + | tig0024442:50673-50692 | None:intergenic | 35.0% | |
| ATATGGTTTCTGCATCTATC+AGG | - | tig0024442:50765-50784 | Msa1417120:intron | 35.0% | |
| AGATAGACTCTTCCATAGAA+AGG | + | tig0024442:51050-51069 | None:intergenic | 35.0% | |
| GTGGCAAATTAGCATATTGA+AGG | + | tig0024442:51201-51220 | None:intergenic | 35.0% | |
| AGAGGTTTGCCAACTTAAAA+GGG | + | tig0024442:51331-51350 | None:intergenic | 35.0% | |
| TAGAGGTTTGCCAACTTAAA+AGG | + | tig0024442:51332-51351 | None:intergenic | 35.0% | |
| ! | CTTGAAGAGAATACCGATTA+AGG | + | tig0024442:51386-51405 | None:intergenic | 35.0% |
| AGCTTGACAGCATAATAGAA+TGG | + | tig0024442:51532-51551 | None:intergenic | 35.0% | |
| ATCAATGACACACAAACAGA+GGG | + | tig0024442:51626-51645 | None:intergenic | 35.0% | |
| TATCAATGACACACAAACAG+AGG | + | tig0024442:51627-51646 | None:intergenic | 35.0% | |
| GGGGTTAATAACGGTTTATA+TGG | - | tig0024442:51673-51692 | Msa1417120:intron | 35.0% | |
| TTCATTGTGATGTACTTGTC+GGG | - | tig0024442:51811-51830 | Msa1417120:intron | 35.0% | |
| AAGAGGATAACATCTTTGCA+CGG | - | tig0024442:51854-51873 | Msa1417120:intron | 35.0% | |
| ! | CTCTACCTTATTTCCTTTGA+AGG | - | tig0024442:52257-52276 | Msa1417120:intron | 35.0% |
| AGAAATATTGGAAGACATGC+GGG | - | tig0024442:52320-52339 | Msa1417120:intron | 35.0% | |
| CAACATGCATACCAAATTTG+CGG | + | tig0024442:52353-52372 | None:intergenic | 35.0% | |
| GCACAACTTTAAGCAGAAAA+TGG | + | tig0024442:52400-52419 | None:intergenic | 35.0% | |
| !! | TTTTTGGAAAACTATGCTCG+AGG | - | tig0024442:52509-52528 | Msa1417120:CDS | 35.0% |
| CTCTCTTGGGACATATAAAA+TGG | - | tig0024442:52633-52652 | Msa1417120:intron | 35.0% | |
| AGTGTCTTAGACCATTTCAA+CGG | - | tig0024442:52718-52737 | Msa1417120:CDS | 35.0% | |
| CCTATAACACCTATAATGAC+TGG | + | tig0024442:52799-52818 | None:intergenic | 35.0% | |
| ! | CCAGTCATTATAGGTGTTAT+AGG | - | tig0024442:52796-52815 | Msa1417120:CDS | 35.0% |
| GTTTCATACGCAAACTAAAG+TGG | + | tig0024442:53098-53117 | None:intergenic | 35.0% | |
| ! | GCTGCAAAAAATGCTCTAAA+TGG | - | tig0024442:53333-53352 | Msa1417120:intron | 35.0% |
| ! | GCTCTAAATGGTAGGAAATT+TGG | - | tig0024442:53345-53364 | Msa1417120:intron | 35.0% |
| CTAAATGGTAGGAAATTTGG+GGG | - | tig0024442:53348-53367 | Msa1417120:intron | 35.0% | |
| TATCGATGTCAGACATTGCA+GGG | + | tig0024442:45171-45190 | None:intergenic | 40.0% | |
| TTATCGATGTCAGACATTGC+AGG | + | tig0024442:45172-45191 | None:intergenic | 40.0% | |
| ! | CGACATTTATTCTAGAGGAG+TGG | + | tig0024442:45656-45675 | None:intergenic | 40.0% |
| AGAGCCGACATTTATTCTAG+AGG | + | tig0024442:45661-45680 | None:intergenic | 40.0% | |
| ! | GCAAATTGCAGTTCCACTTT+TGG | + | tig0024442:45685-45704 | None:intergenic | 40.0% |
| ATGATCGTGACAGAGATACA+AGG | - | tig0024442:46126-46145 | Msa1417120:intron | 40.0% | |
| TCTAGATCTAGATTCTCTCC+TGG | + | tig0024442:46180-46199 | None:intergenic | 40.0% | |
| TGTACCCTTCAGATTGAGAA+GGG | + | tig0024442:46217-46236 | None:intergenic | 40.0% | |
| ! | TTGGTAATTATCGAAGACCG+AGG | + | tig0024442:46291-46310 | None:intergenic | 40.0% |
| GGTCCACTTATAAATTGCGT+TGG | + | tig0024442:46363-46382 | None:intergenic | 40.0% | |
| ! | TCCGATTTGTCTACAGCAAA+AGG | - | tig0024442:46610-46629 | Msa1417120:CDS | 40.0% |
| AATACAGACTGAATTGGGGT+GGG | + | tig0024442:46769-46788 | None:intergenic | 40.0% | |
| TAATACAGACTGAATTGGGG+TGG | + | tig0024442:46770-46789 | None:intergenic | 40.0% | |
| CCAGCCATTGAATATGATAC+AGG | + | tig0024442:46989-47008 | None:intergenic | 40.0% | |
| CCTGTATCATATTCAATGGC+TGG | - | tig0024442:46986-47005 | Msa1417120:intron | 40.0% | |
| GGGATTGCTCATATGATTCA+AGG | - | tig0024442:47276-47295 | Msa1417120:intron | 40.0% | |
| AGTTCAACCTATGACACAAC+AGG | - | tig0024442:47444-47463 | Msa1417120:intron | 40.0% | |
| AAGCAAACCTGTTGTGTCAT+AGG | + | tig0024442:47454-47473 | None:intergenic | 40.0% | |
| !!! | TCTTTTTGTTTTTTGGGGCG+GGG | - | tig0024442:48006-48025 | Msa1417120:intron | 40.0% |
| AGCCAAGTCATGATTGCTAT+TGG | - | tig0024442:48224-48243 | Msa1417120:intron | 40.0% | |
| ! | GCCAAGTCATGATTGCTATT+GGG | - | tig0024442:48225-48244 | Msa1417120:intron | 40.0% |
| ! | CCAAGTCATGATTGCTATTG+GGG | - | tig0024442:48226-48245 | Msa1417120:intron | 40.0% |
| ! | CAAGTCATGATTGCTATTGG+GGG | - | tig0024442:48227-48246 | Msa1417120:intron | 40.0% |
| TACAATTGCAGCACAACTAC+TGG | + | tig0024442:48390-48409 | None:intergenic | 40.0% | |
| TTCCTGACTTACAGGTGATT+CGG | - | tig0024442:48552-48571 | Msa1417120:intron | 40.0% | |
| ! | TGCATTGCTAGCTTCTTCAA+CGG | + | tig0024442:48632-48651 | None:intergenic | 40.0% |
| TGAAGAAGCTAGCAATGCAA+TGG | - | tig0024442:48633-48652 | Msa1417120:intron | 40.0% | |
| !! | AGCAATGCAATGGCTTTAGA+TGG | - | tig0024442:48643-48662 | Msa1417120:intron | 40.0% |
| TAACTTAAGGCTTGGGATTC+TGG | - | tig0024442:48803-48822 | Msa1417120:intron | 40.0% | |
| TGTTACATTGAGAAGTAGCG+AGG | - | tig0024442:49194-49213 | Msa1417120:intron | 40.0% | |
| GTTACATTGAGAAGTAGCGA+GGG | - | tig0024442:49195-49214 | Msa1417120:intron | 40.0% | |
| GGGTCAAGATACCTTCAAAT+CGG | + | tig0024442:49299-49318 | None:intergenic | 40.0% | |
| GAGTTGTTGAATGAGTTGCA+TGG | + | tig0024442:49337-49356 | None:intergenic | 40.0% | |
| ATGTAAAGAAGAATGGAGGC+TGG | + | tig0024442:49429-49448 | None:intergenic | 40.0% | |
| ! | GCACTTGGTGAACAAAATGT+TGG | + | tig0024442:49452-49471 | None:intergenic | 40.0% |
| ATACATGCTCACAGTCAGAA+AGG | + | tig0024442:49484-49503 | None:intergenic | 40.0% | |
| GGAAGATGAGGAACTTAAAG+TGG | + | tig0024442:49633-49652 | None:intergenic | 40.0% | |
| ! | TTGTCCTTTTGACCTTGTGT+CGG | - | tig0024442:49883-49902 | Msa1417120:intron | 40.0% |
| TAATCCGACACAAGGTCAAA+AGG | + | tig0024442:49890-49909 | None:intergenic | 40.0% | |
| GTTCACAATAATCCGACACA+AGG | + | tig0024442:49898-49917 | None:intergenic | 40.0% | |
| TCGGATTATTGTGAACGAGT+AGG | - | tig0024442:49902-49921 | Msa1417120:intron | 40.0% | |
| CGGATTATTGTGAACGAGTA+GGG | - | tig0024442:49903-49922 | Msa1417120:intron | 40.0% | |
| CTAGAACTGCAGCTAATGAA+GGG | + | tig0024442:50282-50301 | None:intergenic | 40.0% | |
| ! | GATAAGTTGAGGTTTGCACT+TGG | + | tig0024442:50316-50335 | None:intergenic | 40.0% |
| AACCTCAACTTATCTGCTGT+TGG | - | tig0024442:50322-50341 | Msa1417120:intron | 40.0% | |
| AAAGTGGGAACATTCCAGAT+AGG | + | tig0024442:50442-50461 | None:intergenic | 40.0% | |
| TTCCCACTTTCCAGTACAAT+TGG | - | tig0024442:50452-50471 | Msa1417120:intron | 40.0% | |
| CACCAATTGTACTGGAAAGT+GGG | + | tig0024442:50457-50476 | None:intergenic | 40.0% | |
| !!! | CATTTTAAGGCCATTGAGAG+CGG | + | tig0024442:50984-51003 | None:intergenic | 40.0% |
| ! | GCTCTCAATGGCCTTAAAAT+GGG | - | tig0024442:50983-51002 | Msa1417120:intron | 40.0% |
| ATTGGAAATTGTGTGTGCCA+CGG | + | tig0024442:51171-51190 | None:intergenic | 40.0% | |
| TTGAGAGGAAGAAATGACCA+AGG | - | tig0024442:51259-51278 | Msa1417120:intron | 40.0% | |
| GAAAATTATTTCCCCCTCCT+TGG | + | tig0024442:51279-51298 | None:intergenic | 40.0% | |
| CAAACAGAGGGAAATAACTG+AGG | + | tig0024442:51614-51633 | None:intergenic | 40.0% | |
| AACGAGCATGTTATGTACCA+AGG | - | tig0024442:51651-51670 | Msa1417120:intron | 40.0% | |
| ACGAGCATGTTATGTACCAA+GGG | - | tig0024442:51652-51671 | Msa1417120:intron | 40.0% | |
| TGTACCAAGGGGGTTAATAA+CGG | - | tig0024442:51664-51683 | Msa1417120:intron | 40.0% | |
| TAAACCGTTATTAACCCCCT+TGG | + | tig0024442:51671-51690 | None:intergenic | 40.0% | |
| TGCACATTCTAAACCAGAAG+AGG | - | tig0024442:51837-51856 | Msa1417120:intron | 40.0% | |
| GCAAAGATGTTATCCTCTTC+TGG | + | tig0024442:51853-51872 | None:intergenic | 40.0% | |
| AGAGGATAACATCTTTGCAC+GGG | - | tig0024442:51855-51874 | Msa1417120:intron | 40.0% | |
| TCAACAGCATATAGCTATGC+AGG | - | tig0024442:51879-51898 | Msa1417120:intron | 40.0% | |
| !! | CGCTATTTTCTGTTGGTTGA+AGG | + | tig0024442:51973-51992 | None:intergenic | 40.0% |
| CAACCAACAGAAAATAGCGT+TGG | - | tig0024442:51974-51993 | Msa1417120:CDS | 40.0% | |
| !! | CTTCCAACGCTATTTTCTGT+TGG | + | tig0024442:51980-51999 | None:intergenic | 40.0% |
| ! | ACAGAAAATAGCGTTGGAAG+TGG | - | tig0024442:51980-51999 | Msa1417120:CDS | 40.0% |
| ! | AAAATAGCGTTGGAAGTGGT+TGG | - | tig0024442:51984-52003 | Msa1417120:CDS | 40.0% |
| ! | AAATAGCGTTGGAAGTGGTT+GGG | - | tig0024442:51985-52004 | Msa1417120:CDS | 40.0% |
| CAGTCAGTCAACTCTAAACA+GGG | + | tig0024442:52118-52137 | None:intergenic | 40.0% | |
| TCAGTCAGTCAACTCTAAAC+AGG | + | tig0024442:52119-52138 | None:intergenic | 40.0% | |
| AGCAGGTGAGGTGAAAATAA+GGG | + | tig0024442:52239-52258 | None:intergenic | 40.0% | |
| CAAAGGAAATAAGGTAGAGC+AGG | + | tig0024442:52256-52275 | None:intergenic | 40.0% | |
| CTGATAGCAATTCAGTACGA+TGG | - | tig0024442:52656-52675 | Msa1417120:intron | 40.0% | |
| GTGTCTTAGACCATTTCAAC+GGG | - | tig0024442:52719-52738 | Msa1417120:CDS | 40.0% | |
| TACTCTATGTCCCGTTGAAA+TGG | + | tig0024442:52732-52751 | None:intergenic | 40.0% | |
| CACCTATAATGACTGGCAAA+GGG | + | tig0024442:52792-52811 | None:intergenic | 40.0% | |
| ACACCTATAATGACTGGCAA+AGG | + | tig0024442:52793-52812 | None:intergenic | 40.0% | |
| TCCAGTAACGTCTTTGTTCA+TGG | - | tig0024442:52902-52921 | Msa1417120:intron | 40.0% | |
| CCAGTAACGTCTTTGTTCAT+GGG | - | tig0024442:52903-52922 | Msa1417120:intron | 40.0% | |
| TGCACCTTATTGGAATGTAC+AGG | - | tig0024442:52947-52966 | Msa1417120:intron | 40.0% | |
| GCACCTTATTGGAATGTACA+GGG | - | tig0024442:52948-52967 | Msa1417120:intron | 40.0% | |
| AGGGATAACAACATTCACCA+AGG | + | tig0024442:52975-52994 | None:intergenic | 40.0% | |
| CATACAAATTTCACGCACCT+CGG | - | tig0024442:53137-53156 | Msa1417120:intron | 40.0% | |
| ATACAAATTTCACGCACCTC+GGG | - | tig0024442:53138-53157 | Msa1417120:intron | 40.0% | |
| TTTAAATGGGTCGAGCTTTG+TGG | - | tig0024442:53184-53203 | Msa1417120:intron | 40.0% | |
| GTTTCTCTTGTAGGTGTTCT+TGG | - | tig0024442:53284-53303 | Msa1417120:intron | 40.0% | |
| GTGAATGCATGAACACATCA+AGG | + | tig0024442:53576-53595 | None:intergenic | 40.0% | |
| TGATGTGTTCATGCATTCAC+TGG | - | tig0024442:53576-53595 | Msa1417120:CDS | 40.0% | |
| AAGCGAGGAAGGTGATGAAA+TGG | + | tig0024442:45147-45166 | None:intergenic | 45.0% | |
| !! | TGCAAAAGGAAGCACCTTGT+CGG | + | tig0024442:45221-45240 | None:intergenic | 45.0% |
| !! | AATGTCGGCTCTTCCAAAAG+TGG | - | tig0024442:45669-45688 | Msa1417120:intron | 45.0% |
| AGTGGAACTGCAATTTGCAG+TGG | - | tig0024442:45687-45706 | Msa1417120:intron | 45.0% | |
| ATACTTCAGCCAAGTTCCCA+TGG | - | tig0024442:45811-45830 | Msa1417120:intron | 45.0% | |
| TATCATCTCTGTGACGGTCA+CGG | + | tig0024442:45900-45919 | None:intergenic | 45.0% | |
| GACAGTTATAATCGGCAACG+TGG | - | tig0024442:45952-45971 | Msa1417120:intron | 45.0% | |
| AACGTGGCCGTGATTATGAT+AGG | - | tig0024442:45968-45987 | Msa1417120:intron | 45.0% | |
| GGCCGTGATTATGATAGGTT+TGG | - | tig0024442:45973-45992 | Msa1417120:intron | 45.0% | |
| GAGCACATTCAAAGAGATCC+AGG | - | tig0024442:46159-46178 | Msa1417120:intron | 45.0% | |
| TTCAGATTGAGAAGGGGATC+TGG | + | tig0024442:46210-46229 | None:intergenic | 45.0% | |
| AGATCCCCTTCTCAATCTGA+AGG | - | tig0024442:46209-46228 | Msa1417120:intron | 45.0% | |
| GATCCCCTTCTCAATCTGAA+GGG | - | tig0024442:46210-46229 | Msa1417120:intron | 45.0% | |
| GTACCCTTCAGATTGAGAAG+GGG | + | tig0024442:46216-46235 | None:intergenic | 45.0% | |
| GTGTACCCTTCAGATTGAGA+AGG | + | tig0024442:46218-46237 | None:intergenic | 45.0% | |
| GTAAGTGAGGCTAGATCAAC+AGG | + | tig0024442:46341-46360 | None:intergenic | 45.0% | |
| !!! | AAGGACCTCTGGTTTTGACA+TGG | - | tig0024442:46629-46648 | Msa1417120:CDS | 45.0% |
| ! | TGAAACAGTGGGTGTTACAC+CGG | + | tig0024442:46667-46686 | None:intergenic | 45.0% |
| GGGTACAAACCTGAAACAGT+GGG | + | tig0024442:46678-46697 | None:intergenic | 45.0% | |
| TGGGTACAAACCTGAAACAG+TGG | + | tig0024442:46679-46698 | None:intergenic | 45.0% | |
| ATACAGACTGAATTGGGGTG+GGG | + | tig0024442:46768-46787 | None:intergenic | 45.0% | |
| !! | TGTTGCTTTGCTGTTGTGTG+TGG | - | tig0024442:46880-46899 | Msa1417120:intron | 45.0% |
| !!! | GTTGTGTGTGGTTTTGTGTC+TGG | - | tig0024442:46892-46911 | Msa1417120:intron | 45.0% |
| TTGGGTGAGAAGGCAATGTT+GGG | - | tig0024442:46928-46947 | Msa1417120:intron | 45.0% | |
| !! | ACACTGATAGGTAGGTTGGT+AGG | + | tig0024442:46962-46981 | None:intergenic | 45.0% |
| GTGTACACTGATAGGTAGGT+TGG | + | tig0024442:46966-46985 | None:intergenic | 45.0% | |
| GATACAGGGTGTACACTGAT+AGG | + | tig0024442:46974-46993 | None:intergenic | 45.0% | |
| TAGTAATGCAGGGCAAATGC+TGG | - | tig0024442:47254-47273 | Msa1417120:intron | 45.0% | |
| AGTAATGCAGGGCAAATGCT+GGG | - | tig0024442:47255-47274 | Msa1417120:intron | 45.0% | |
| AAAAGGCTACAAGGCATGCT+CGG | - | tig0024442:47552-47571 | Msa1417120:intron | 45.0% | |
| AGAACCTGCTCGTTAGCAAA+AGG | + | tig0024442:47602-47621 | None:intergenic | 45.0% | |
| TAACGAGCAGGTTCTCTACA+TGG | - | tig0024442:47607-47626 | Msa1417120:CDS | 45.0% | |
| !!! | CTTTTTGTTTTTTGGGGCGG+GGG | - | tig0024442:48007-48026 | Msa1417120:intron | 45.0% |
| CCCCAATAGCAATCATGACT+TGG | + | tig0024442:48229-48248 | None:intergenic | 45.0% | |
| ATTGCACCATGCAAGTGTCT+TGG | - | tig0024442:48456-48475 | Msa1417120:intron | 45.0% | |
| TTGCACCATGCAAGTGTCTT+GGG | - | tig0024442:48457-48476 | Msa1417120:intron | 45.0% | |
| AACCGAATCACCTGTAAGTC+AGG | + | tig0024442:48557-48576 | None:intergenic | 45.0% | |
| GTTACATGTGAAGATGGAGC+TGG | + | tig0024442:49094-49113 | None:intergenic | 45.0% | |
| CAGCATGTGAGCCATATTTG+AGG | + | tig0024442:49168-49187 | None:intergenic | 45.0% | |
| ! | TAGGCTTCACTCCGATTTGA+AGG | - | tig0024442:49285-49304 | Msa1417120:intron | 45.0% |
| ! | CATGGGCTCTGATAAACTTG+GGG | + | tig0024442:49319-49338 | None:intergenic | 45.0% |
| ! | GCATGGGCTCTGATAAACTT+GGG | + | tig0024442:49320-49339 | None:intergenic | 45.0% |
| ! | TGCATGGGCTCTGATAAACT+TGG | + | tig0024442:49321-49340 | None:intergenic | 45.0% |
| GAAAGGAGAAACTGAGCACT+TGG | + | tig0024442:49467-49486 | None:intergenic | 45.0% | |
| TCTCTATGCAAAGGGCCATA+GGG | - | tig0024442:49728-49747 | Msa1417120:intron | 45.0% | |
| GTGTTGTAAGAAAAGGGGGT+GGG | + | tig0024442:49764-49783 | None:intergenic | 45.0% | |
| TGTGTTGTAAGAAAAGGGGG+TGG | + | tig0024442:49765-49784 | None:intergenic | 45.0% | |
| ! | CAATGATTTGGAGTTCGGAC+AGG | + | tig0024442:49942-49961 | None:intergenic | 45.0% |
| CAAATTGATTGGATTCGCGG+CGG | + | tig0024442:50047-50066 | None:intergenic | 45.0% | |
| ATATTGGACGGGCAAACTCT+GGG | + | tig0024442:50177-50196 | None:intergenic | 45.0% | |
| CCTAGAACTGCAGCTAATGA+AGG | + | tig0024442:50283-50302 | None:intergenic | 45.0% | |
| CCTTCATTAGCTGCAGTTCT+AGG | - | tig0024442:50280-50299 | Msa1417120:intron | 45.0% | |
| GTCCAACAGCAGATAAGTTG+AGG | + | tig0024442:50327-50346 | None:intergenic | 45.0% | |
| ACCTTCTGTTCTGACCTATC+TGG | - | tig0024442:50425-50444 | Msa1417120:intron | 45.0% | |
| TCCAGATAGGTCAGAACAGA+AGG | + | tig0024442:50429-50448 | None:intergenic | 45.0% | |
| CCACCAATTGTACTGGAAAG+TGG | + | tig0024442:50458-50477 | None:intergenic | 45.0% | |
| CCACTTTCCAGTACAATTGG+TGG | - | tig0024442:50455-50474 | Msa1417120:intron | 45.0% | |
| AAAGATGCGATCAAGTCCCT+CGG | + | tig0024442:50483-50502 | None:intergenic | 45.0% | |
| GGACTTGATCGCATCTTTGT+GGG | - | tig0024442:50485-50504 | Msa1417120:intron | 45.0% | |
| TTGATCGCATCTTTGTGGGT+GGG | - | tig0024442:50489-50508 | Msa1417120:intron | 45.0% | |
| ACTTCGAAGAGGACTGCAAT+GGG | + | tig0024442:50704-50723 | None:intergenic | 45.0% | |
| AACTTCGAAGAGGACTGCAA+TGG | + | tig0024442:50705-50724 | None:intergenic | 45.0% | |
| CAAGCAATGTCTGTTACTGC+TGG | + | tig0024442:50959-50978 | None:intergenic | 45.0% | |
| ! | CGCTCTCAATGGCCTTAAAA+TGG | - | tig0024442:50982-51001 | Msa1417120:intron | 45.0% |
| !! | CTGTCAGGTTAGCCTTTCTA+TGG | - | tig0024442:51035-51054 | Msa1417120:CDS | 45.0% |
| AGAGGAAGAAATGACCAAGG+AGG | - | tig0024442:51262-51281 | Msa1417120:intron | 45.0% | |
| GAGGAAGAAATGACCAAGGA+GGG | - | tig0024442:51263-51282 | Msa1417120:intron | 45.0% | |
| AGGAAGAAATGACCAAGGAG+GGG | - | tig0024442:51264-51283 | Msa1417120:intron | 45.0% | |
| ATCAGCAAGAAGGGGATTCA+GGG | + | tig0024442:51465-51484 | None:intergenic | 45.0% | |
| AATCAGCAAGAAGGGGATTC+AGG | + | tig0024442:51466-51485 | None:intergenic | 45.0% | |
| CGAGCATGTTATGTACCAAG+GGG | - | tig0024442:51653-51672 | Msa1417120:intron | 45.0% | |
| GAGCATGTTATGTACCAAGG+GGG | - | tig0024442:51654-51673 | Msa1417120:intron | 45.0% | |
| AGCATATAGCTATGCAGGTG+AGG | - | tig0024442:51884-51903 | Msa1417120:intron | 45.0% | |
| GTGGTTGGGCTAAATATTCC+AGG | - | tig0024442:51999-52018 | Msa1417120:CDS | 45.0% | |
| TGGGGCTTTCATCGTTTGTT+GGG | + | tig0024442:52028-52047 | None:intergenic | 45.0% | |
| ! | CAACTCTAAACAGGGTGCTT+TGG | + | tig0024442:52110-52129 | None:intergenic | 45.0% |
| GAGCAGGTGAGGTGAAAATA+AGG | + | tig0024442:52240-52259 | None:intergenic | 45.0% | |
| GAAATAAGGTAGAGCAGGTG+AGG | + | tig0024442:52251-52270 | None:intergenic | 45.0% | |
| GACGGCCTTCAAAGGAAATA+AGG | + | tig0024442:52265-52284 | None:intergenic | 45.0% | |
| GTCCCTTTGCCAGTCATTAT+AGG | - | tig0024442:52787-52806 | Msa1417120:CDS | 45.0% | |
| CCCATGAACAAAGACGTTAC+TGG | + | tig0024442:52906-52925 | None:intergenic | 45.0% | |
| GGTCCCTGTACATTCCAATA+AGG | + | tig0024442:52954-52973 | None:intergenic | 45.0% | |
| ATTGGAATGTACAGGGACCT+TGG | - | tig0024442:52955-52974 | Msa1417120:intron | 45.0% | |
| ATCCCTCGTCCAAATCCAAA+CGG | - | tig0024442:52989-53008 | Msa1417120:intron | 45.0% | |
| GCTGTCTACAGGAATTGGAA+AGG | - | tig0024442:53015-53034 | Msa1417120:intron | 45.0% | |
| GTGGTTTCGGTTTCTCTTGT+AGG | - | tig0024442:53275-53294 | Msa1417120:intron | 45.0% | |
| !!! | AATTGTATTTTAAATTAAAA+AGG | - | tig0024442:48403-48422 | Msa1417120:intron | 5.0% |
| !! | AAAAGGAAGCACCTTGTCGG+GGG | + | tig0024442:45218-45237 | None:intergenic | 50.0% |
| !! | CAAAAGGAAGCACCTTGTCG+GGG | + | tig0024442:45219-45238 | None:intergenic | 50.0% |
| !! | GCAAAAGGAAGCACCTTGTC+GGG | + | tig0024442:45220-45239 | None:intergenic | 50.0% |
| TGACCAGATCCATGGGAACT+TGG | + | tig0024442:45823-45842 | None:intergenic | 50.0% | |
| GCTCTCATGACCAGATCCAT+GGG | + | tig0024442:45830-45849 | None:intergenic | 50.0% | |
| TGCTCTCATGACCAGATCCA+TGG | + | tig0024442:45831-45850 | None:intergenic | 50.0% | |
| ! | ATGAGAGCACGAGGATGAGA+AGG | - | tig0024442:45842-45861 | Msa1417120:intron | 50.0% |
| ACGAGGATGAGAAGGAGAGA+TGG | - | tig0024442:45850-45869 | Msa1417120:intron | 50.0% | |
| TGAGAAGGAGAGATGGAGAC+AGG | - | tig0024442:45857-45876 | Msa1417120:intron | 50.0% | |
| GTCTACAGCAAAAGGACCTC+TGG | - | tig0024442:46618-46637 | Msa1417120:CDS | 50.0% | |
| !! | TGGTGCCATGTCAAAACCAG+AGG | + | tig0024442:46637-46656 | None:intergenic | 50.0% |
| GGTGTAACACCCACTGTTTC+AGG | - | tig0024442:46666-46685 | Msa1417120:intron | 50.0% | |
| TACAGACTGAATTGGGGTGG+GGG | + | tig0024442:46767-46786 | None:intergenic | 50.0% | |
| GTTGGGTGAGAAGGCAATGT+TGG | - | tig0024442:46927-46946 | Msa1417120:intron | 50.0% | |
| CAGGGTGTACACTGATAGGT+AGG | + | tig0024442:46970-46989 | None:intergenic | 50.0% | |
| CTGCAGACGTTGAGAGTGAA+AGG | + | tig0024442:47033-47052 | None:intergenic | 50.0% | |
| TTCACTCTCAACGTCTGCAG+TGG | - | tig0024442:47033-47052 | Msa1417120:intron | 50.0% | |
| GTAATGCAGGGCAAATGCTG+GGG | - | tig0024442:47256-47275 | Msa1417120:intron | 50.0% | |
| CTCACCATATGGGATATCGC+AGG | - | tig0024442:47314-47333 | Msa1417120:intron | 50.0% | |
| AGCACCTGCGATATCCCATA+TGG | + | tig0024442:47321-47340 | None:intergenic | 50.0% | |
| ! | TCCTCCTTTTGCTAACGAGC+AGG | - | tig0024442:47595-47614 | Msa1417120:intron | 50.0% |
| ACCTGCTCGTTAGCAAAAGG+AGG | + | tig0024442:47599-47618 | None:intergenic | 50.0% | |
| GCTATTGGGGGAAATTCTGC+TGG | - | tig0024442:48239-48258 | Msa1417120:intron | 50.0% | |
| CAAGACCCAAGACACTTGCA+TGG | + | tig0024442:48465-48484 | None:intergenic | 50.0% | |
| CATGCAAGTGTCTTGGGTCT+TGG | - | tig0024442:48463-48482 | Msa1417120:intron | 50.0% | |
| CTGTGAATAGGAGGAAGCGA+TGG | + | tig0024442:49654-49673 | None:intergenic | 50.0% | |
| CTCTCTATGCAAAGGGCCAT+AGG | - | tig0024442:49727-49746 | Msa1417120:intron | 50.0% | |
| ! | GTGGGTTGTTGTCAACCCTA+TGG | + | tig0024442:49746-49765 | None:intergenic | 50.0% |
| CATATTGGACGGGCAAACTC+TGG | + | tig0024442:50178-50197 | None:intergenic | 50.0% | |
| ! | GTGTTGCTGTGAGAGTTCGT+AGG | - | tig0024442:50242-50261 | Msa1417120:intron | 50.0% |
| AGTTGAGGTTTGCACTTGGC+TGG | + | tig0024442:50312-50331 | None:intergenic | 50.0% | |
| TCTGCTGTTGGACTTTCTGC+AGG | - | tig0024442:50334-50353 | Msa1417120:intron | 50.0% | |
| CTGCTGTTGGACTTTCTGCA+GGG | - | tig0024442:50335-50354 | Msa1417120:intron | 50.0% | |
| AGTACAATTGGTGGAGCCGA+GGG | - | tig0024442:50464-50483 | Msa1417120:intron | 50.0% | |
| GGGACTTGATCGCATCTTTG+TGG | - | tig0024442:50484-50503 | Msa1417120:intron | 50.0% | |
| CTTGATCGCATCTTTGTGGG+TGG | - | tig0024442:50488-50507 | Msa1417120:intron | 50.0% | |
| ! | ATTGCTTGTGCCGCTCTCAA+TGG | - | tig0024442:50971-50990 | Msa1417120:intron | 50.0% |
| GGAAGAAATGACCAAGGAGG+GGG | - | tig0024442:51265-51284 | Msa1417120:intron | 50.0% | |
| TCAGCAAGAAGGGGATTCAG+GGG | + | tig0024442:51464-51483 | None:intergenic | 50.0% | |
| ! | TCATCGTTTGTTGGGACTCC+TGG | + | tig0024442:52020-52039 | None:intergenic | 50.0% |
| GTGGGGCTTTCATCGTTTGT+TGG | + | tig0024442:52029-52048 | None:intergenic | 50.0% | |
| TCAGTAGTGACGGCCTTCAA+AGG | + | tig0024442:52273-52292 | None:intergenic | 50.0% | |
| CGGGATGAATGCCGCAAATT+TGG | - | tig0024442:52339-52358 | Msa1417120:intron | 50.0% | |
| CTCTGGTTAAGTGGGTGAGT+TGG | - | tig0024442:52444-52463 | Msa1417120:CDS | 50.0% | |
| CTCCGTTTGGATTTGGACGA+GGG | + | tig0024442:52994-53013 | None:intergenic | 50.0% | |
| TCTCCGTTTGGATTTGGACG+AGG | + | tig0024442:52995-53014 | None:intergenic | 50.0% | |
| GACAGCTCTCCGTTTGGATT+TGG | + | tig0024442:53001-53020 | None:intergenic | 50.0% | |
| GGAGAGCTGTCTACAGGAAT+TGG | - | tig0024442:53010-53029 | Msa1417120:intron | 50.0% | |
| CATTGCAGGGAAAGCGAGGA+AGG | + | tig0024442:45158-45177 | None:intergenic | 55.0% | |
| CAGACATTGCAGGGAAAGCG+AGG | + | tig0024442:45162-45181 | None:intergenic | 55.0% | |
| CAGCCAAGTTCCCATGGATC+TGG | - | tig0024442:45817-45836 | Msa1417120:intron | 55.0% | |
| ! | GATCTGGTCATGAGAGCACG+AGG | - | tig0024442:45833-45852 | Msa1417120:intron | 55.0% |
| ACAGACTGAATTGGGGTGGG+GGG | + | tig0024442:46766-46785 | None:intergenic | 55.0% | |
| GGGGGAAATTCTGCTGGATC+AGG | - | tig0024442:48245-48264 | Msa1417120:intron | 55.0% | |
| GGAGGAAGCGATGGAAGATG+AGG | + | tig0024442:49645-49664 | None:intergenic | 55.0% | |
| AGGTTTGCACTTGGCTGGCA+GGG | + | tig0024442:50307-50326 | None:intergenic | 55.0% | |
| CTCGGCTCCACCAATTGTAC+TGG | + | tig0024442:50465-50484 | None:intergenic | 55.0% | |
| CAGTACAATTGGTGGAGCCG+AGG | - | tig0024442:50463-50482 | Msa1417120:intron | 55.0% | |
| ! | CTGTAAGGCGTGCTACTGTC+AGG | - | tig0024442:51020-51039 | Msa1417120:intron | 55.0% |
| CCTGTAGACAGCTCTCCGTT+TGG | + | tig0024442:53007-53026 | None:intergenic | 55.0% | |
| CCAAACGGAGAGCTGTCTAC+AGG | - | tig0024442:53004-53023 | Msa1417120:intron | 55.0% | |
| AAATTTCACGCACCTCGGGC+TGG | - | tig0024442:53142-53161 | Msa1417120:intron | 55.0% | |
| AATTTCACGCACCTCGGGCT+GGG | - | tig0024442:53143-53162 | Msa1417120:intron | 55.0% | |
| CATCTCTGTGACGGTCACGG+TGG | + | tig0024442:45897-45916 | None:intergenic | 60.0% | |
| GACATGGCACCACCTGCTAC+CGG | - | tig0024442:46645-46664 | Msa1417120:intron | 60.0% | |
| ! | GGTGTTACACCGGTAGCAGG+TGG | + | tig0024442:46657-46676 | None:intergenic | 60.0% |
| ! | GTGGGTGTTACACCGGTAGC+AGG | + | tig0024442:46660-46679 | None:intergenic | 60.0% |
| CATGCTCGGCGAGTGTACGT+TGG | - | tig0024442:47566-47585 | Msa1417120:intron | 60.0% | |
| CTCGGCGAGTGTACGTTGGT+GGG | - | tig0024442:47570-47589 | Msa1417120:intron | 60.0% | |
| GAGGTTTGCACTTGGCTGGC+AGG | + | tig0024442:50308-50327 | None:intergenic | 60.0% | |
| AATCACTATGGCCCAGCCCG+AGG | + | tig0024442:53157-53176 | None:intergenic | 60.0% | |
| CGGTGCTTCTTCCCCCGACA+AGG | - | tig0024442:45204-45223 | Msa1417120:exon | 65.0% | |
| GCTCGGCGAGTGTACGTTGG+TGG | - | tig0024442:47569-47588 | Msa1417120:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024442 | gene | 45025 | 53622 | 45025 | ID=Msa1417120;Name=Msa1417120 |
| tig0024442 | mRNA | 45025 | 53622 | 45025 | ID=Msa1417120-mRNA-1;Parent=Msa1417120;Name=Msa1417120-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.94|0.94|1|1|1|18|188|569 |
| tig0024442 | exon | 45025 | 45350 | 45025 | ID=Msa1417120-mRNA-1:exon:23255;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 45611 | 45678 | 45611 | ID=Msa1417120-mRNA-1:exon:23254;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 46287 | 46368 | 46287 | ID=Msa1417120-mRNA-1:exon:23253;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 46577 | 46663 | 46577 | ID=Msa1417120-mRNA-1:exon:23252;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 46747 | 46810 | 46747 | ID=Msa1417120-mRNA-1:exon:23251;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 47606 | 47694 | 47606 | ID=Msa1417120-mRNA-1:exon:23250;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 47861 | 47936 | 47861 | ID=Msa1417120-mRNA-1:exon:23249;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 48083 | 48181 | 48083 | ID=Msa1417120-mRNA-1:exon:23248;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 48291 | 48406 | 48291 | ID=Msa1417120-mRNA-1:exon:23247;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 49978 | 50081 | 49978 | ID=Msa1417120-mRNA-1:exon:23246;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 50381 | 50441 | 50381 | ID=Msa1417120-mRNA-1:exon:23245;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 51031 | 51090 | 51031 | ID=Msa1417120-mRNA-1:exon:23244;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 51182 | 51226 | 51182 | ID=Msa1417120-mRNA-1:exon:23243;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 51312 | 51382 | 51312 | ID=Msa1417120-mRNA-1:exon:23242;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 51960 | 52021 | 51960 | ID=Msa1417120-mRNA-1:exon:23241;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 52416 | 52532 | 52416 | ID=Msa1417120-mRNA-1:exon:23240;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 52658 | 52827 | 52658 | ID=Msa1417120-mRNA-1:exon:23239;Parent=Msa1417120-mRNA-1 |
| tig0024442 | exon | 53422 | 53622 | 53422 | ID=Msa1417120-mRNA-1:exon:23238;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 53422 | 53622 | 53422 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 52658 | 52827 | 52658 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 52416 | 52532 | 52416 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 51960 | 52021 | 51960 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 51312 | 51382 | 51312 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 51182 | 51226 | 51182 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 51031 | 51090 | 51031 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 50381 | 50441 | 50381 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 49978 | 50081 | 49978 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 48291 | 48406 | 48291 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 48083 | 48181 | 48083 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 47861 | 47936 | 47861 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 47606 | 47694 | 47606 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 46747 | 46810 | 46747 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 46577 | 46663 | 46577 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 46287 | 46368 | 46287 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 45611 | 45678 | 45611 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | CDS | 45213 | 45350 | 45213 | ID=Msa1417120-mRNA-1:cds;Parent=Msa1417120-mRNA-1 |
| tig0024442 | three_prime_UTR | 45025 | 45212 | 45025 | ID=Msa1417120-mRNA-1:three_prime_utr;Parent=Msa1417120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
