AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1386420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1386420 MtrunA17_Chr4g0069451 96.889 675 10 3 1 671 1 668 0.0 1336
Msa1386420 MtrunA17_Chr3g0086111 36.996 273 145 6 168 426 178 437 1.56e-45 175
Msa1386420 MtrunA17_Chr3g0086111 40.559 143 85 0 487 629 548 690 4.59e-27 118
Msa1386420 MtrunA17_Chr5g0394201 26.296 540 330 19 157 658 342 851 8.69e-35 142
Msa1386420 MtrunA17_Chr4g0017211 26.812 552 293 15 168 629 1441 1971 1.07e-34 142
Msa1386420 MtrunA17_Chr3g0095091 25.887 479 296 15 176 614 570 1029 4.15e-33 137
Msa1386420 MtrunA17_Chr5g0442141 25.155 485 292 13 176 614 616 1075 6.73e-33 136
Msa1386420 MtrunA17_Chr4g0066741 23.718 468 317 11 170 614 181 631 2.01e-32 134
Msa1386420 MtrunA17_Chr3g0137091 25.572 481 299 13 177 614 289 753 2.91e-32 134
Msa1386420 MtrunA17_Chr2g0286291 24.204 471 311 14 170 614 184 634 1.64e-31 132
Msa1386420 MtrunA17_Chr1g0205891 26.369 493 309 16 157 614 355 828 6.45e-31 130
Msa1386420 MtrunA17_Chr4g0052341 25.051 495 315 13 177 633 745 1221 1.51e-29 126
Msa1386420 MtrunA17_Chr5g0403921 24.521 522 329 17 136 615 151 649 5.61e-29 123
Msa1386420 MtrunA17_Chr4g0066651 26.025 488 287 16 176 614 988 1450 1.04e-27 120
Msa1386420 MtrunA17_Chr8g0384531 24.335 526 311 11 155 607 363 874 9.63e-27 117
Msa1386420 MtrunA17_Chr1g0183681 23.577 492 320 11 168 607 382 869 2.09e-26 115
Msa1386420 MtrunA17_Chr7g0232121 24.855 519 324 17 153 615 11 519 5.51e-22 101
Msa1386420 MtrunA17_Chr7g0257101 38.462 143 84 2 465 606 1186 1325 5.55e-22 102
Msa1386420 MtrunA17_Chr7g0257101 25.316 316 203 11 122 424 535 830 3.59e-15 80.1
Msa1386420 MtrunA17_Chr8g0348721 25.330 454 279 13 195 605 1008 1444 7.26e-21 98.6
Msa1386420 MtrunA17_Chr1g0175191 27.881 269 169 11 168 424 512 767 3.58e-20 96.3
Msa1386420 MtrunA17_Chr1g0175191 36.000 125 80 0 489 613 1078 1202 2.07e-17 87.4
Msa1386420 MtrunA17_Chr1g0163011 36.620 142 90 0 473 614 570 711 9.06e-20 94.4
Msa1386420 MtrunA17_Chr1g0163011 30.597 268 146 12 171 417 189 437 5.87e-18 88.6
Msa1386420 MtrunA17_Chr4g0040301 31.111 135 93 0 473 607 380 514 1.32e-18 90.5
Msa1386420 MtrunA17_Chr1g0168031 31.944 144 95 2 491 632 1005 1147 1.02e-15 81.6
Msa1386420 MtrunA17_Chr1g0190381 32.886 149 86 2 473 607 188 336 3.88e-15 79.0
Msa1386420 MtrunA17_Chr2g0320751 28.387 155 108 2 463 617 842 993 4.78e-15 79.3
Msa1386420 MtrunA17_Chr4g0024921 28.571 154 106 2 457 606 746 899 7.76e-15 78.6
Msa1386420 MtrunA17_Chr1g0212331 35.345 116 75 0 491 606 887 1002 9.81e-14 75.1
Msa1386420 MtrunA17_Chr2g0281601 32.090 134 88 1 480 613 1142 1272 1.02e-12 72.0
Msa1386420 MtrunA17_Chr7g0255821 33.898 118 76 1 491 606 668 785 4.04e-12 69.7
Msa1386420 MtrunA17_Chr7g0231521 33.813 139 80 2 489 615 302 440 4.41e-12 69.7
Msa1386420 MtrunA17_Chr7g0233021 22.976 531 305 19 166 601 645 1166 6.18e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1386420 AT1G48310.1 68.741 675 196 6 6 671 5 673 0.0 937
Msa1386420 AT1G48310.2 68.289 678 199 6 6 671 5 678 0.0 935
Msa1386420 AT1G48310.3 70.894 615 175 3 6 620 5 615 0.0 896
Msa1386420 AT1G48310.4 68.254 504 156 3 6 509 5 504 0.0 706
Msa1386420 AT5G07810.1 35.363 509 263 11 167 623 194 688 2.81e-81 281
Msa1386420 AT5G19310.2 27.291 491 304 16 158 614 102 573 4.93e-35 142
Msa1386420 AT5G19310.1 27.291 491 304 16 158 614 366 837 5.22e-35 143
Msa1386420 AT3G06010.1 25.885 537 337 17 157 658 382 892 9.10e-35 142
Msa1386420 AT2G13370.1 26.327 471 300 12 177 614 625 1081 2.78e-34 141
Msa1386420 AT2G13370.2 26.327 471 300 12 177 614 625 1081 2.78e-34 141
Msa1386420 AT2G13370.3 26.327 471 300 12 177 614 625 1081 2.78e-34 141
Msa1386420 AT2G25170.2 25.714 490 311 11 165 614 278 754 6.74e-34 140
Msa1386420 AT2G25170.1 25.714 490 311 11 165 614 261 737 7.24e-34 140
Msa1386420 AT2G25170.4 25.714 490 311 11 165 614 261 737 7.24e-34 140
Msa1386420 AT2G25170.3 25.714 490 311 11 165 614 287 763 7.72e-34 140
Msa1386420 AT3G06400.3 23.355 471 315 14 170 614 182 632 3.75e-30 128
Msa1386420 AT5G18620.1 23.679 473 311 14 170 614 187 637 3.85e-30 128
Msa1386420 AT3G06400.1 23.355 471 315 14 170 614 182 632 3.94e-30 128
Msa1386420 AT3G06400.2 23.355 471 315 14 170 614 182 632 4.05e-30 127
Msa1386420 AT5G18620.2 23.679 473 311 14 170 614 187 637 4.18e-30 127
Msa1386420 AT4G31900.3 26.216 473 307 12 165 614 213 666 8.62e-30 127
Msa1386420 AT4G31900.1 26.216 473 307 12 165 614 213 666 1.10e-29 126
Msa1386420 AT4G31900.2 26.216 473 307 12 165 614 172 625 1.31e-29 126
Msa1386420 AT2G18760.3 24.490 490 314 12 169 607 436 920 2.21e-29 125
Msa1386420 AT2G18760.4 24.490 490 314 12 169 607 377 861 3.52e-29 125
Msa1386420 AT2G18760.1 24.490 490 314 12 169 607 377 861 3.52e-29 125
Msa1386420 AT2G18760.2 24.490 490 314 12 169 607 377 861 3.52e-29 125
Msa1386420 AT2G18760.7 24.490 490 314 12 169 607 377 861 3.52e-29 125
Msa1386420 AT2G18760.5 24.490 490 314 12 169 607 377 861 3.52e-29 125
Msa1386420 AT2G18760.6 24.490 490 314 12 169 607 377 861 3.52e-29 125
Msa1386420 AT5G63950.1 25.146 513 295 15 169 607 369 866 3.57e-28 122
Msa1386420 AT5G44800.1 25.902 471 296 11 185 622 700 1150 1.20e-27 120
Msa1386420 AT5G63950.2 24.900 498 298 12 169 607 369 849 2.43e-27 119
Msa1386420 AT5G66750.1 24.845 483 304 15 176 615 201 667 3.09e-26 115
Msa1386420 AT2G28290.1 25.253 495 311 17 162 614 738 1215 7.55e-25 112
Msa1386420 AT2G28290.5 25.253 495 311 17 162 614 739 1216 8.09e-25 111
Msa1386420 AT2G28290.2 24.899 494 314 16 162 614 738 1215 8.36e-25 111
Msa1386420 AT2G28290.6 24.899 494 314 16 162 614 739 1216 8.74e-25 111
Msa1386420 AT2G28290.3 24.899 494 314 16 162 614 738 1215 8.81e-25 111
Msa1386420 AT2G28290.4 24.899 494 314 16 162 614 738 1215 8.81e-25 111
Msa1386420 AT2G44980.3 25.000 536 307 17 150 615 19 529 1.33e-23 107
Msa1386420 AT2G46020.5 25.934 455 263 15 195 598 1002 1433 1.89e-22 103
Msa1386420 AT2G46020.1 25.934 455 263 15 195 598 1002 1433 1.89e-22 103
Msa1386420 AT2G46020.6 25.934 455 263 15 195 598 1002 1433 1.89e-22 103
Msa1386420 AT2G46020.2 25.490 459 261 15 195 598 1002 1434 3.55e-22 103
Msa1386420 AT2G46020.3 25.490 459 261 15 195 598 1002 1434 3.55e-22 103
Msa1386420 AT2G46020.4 25.490 459 261 15 195 598 1002 1434 3.55e-22 103
Msa1386420 AT2G44980.2 24.767 537 308 18 150 615 19 530 1.11e-21 100
Msa1386420 AT3G57300.1 37.762 143 85 2 465 606 1200 1339 1.20e-21 101
Msa1386420 AT3G57300.1 26.959 319 196 12 122 424 541 838 7.09e-17 85.9
Msa1386420 AT3G57300.4 37.762 143 85 2 465 606 1200 1339 1.20e-21 101
Msa1386420 AT3G57300.4 26.959 319 196 12 122 424 541 838 7.09e-17 85.9
Msa1386420 AT3G57300.2 37.762 143 85 2 465 606 1233 1372 1.29e-21 101
Msa1386420 AT2G44980.1 24.038 520 314 16 150 615 19 511 6.48e-21 98.6
Msa1386420 AT3G54280.2 29.897 291 158 9 164 427 1470 1741 7.17e-21 99.0
Msa1386420 AT3G54280.2 31.333 150 100 1 483 629 1855 2004 1.82e-16 84.7
Msa1386420 AT3G54280.1 29.897 291 158 9 164 427 1439 1710 7.35e-21 99.0
Msa1386420 AT3G54280.1 31.333 150 100 1 483 629 1824 1973 1.76e-16 84.7
Msa1386420 AT3G12810.1 29.151 271 163 12 168 424 527 782 2.01e-20 97.4
Msa1386420 AT3G12810.1 37.324 142 86 2 488 627 1090 1230 1.70e-19 94.4
Msa1386420 AT3G12810.2 29.151 271 163 12 168 424 523 778 2.10e-20 97.4
Msa1386420 AT3G12810.2 37.324 142 86 2 488 627 1086 1226 1.73e-19 94.4
Msa1386420 AT1G03750.1 32.593 135 91 0 473 607 528 662 3.77e-20 95.9
Msa1386420 AT1G03750.1 28.417 278 152 11 169 417 131 390 6.64e-17 85.5
Msa1386420 AT2G02090.1 38.028 142 88 0 473 614 588 729 1.33e-19 94.4
Msa1386420 AT2G02090.1 27.035 344 209 12 133 455 169 491 5.17e-15 79.3
Msa1386420 AT3G57300.3 26.959 319 196 12 122 424 541 838 5.66e-17 86.3
Msa1386420 AT1G02670.6 29.444 180 121 4 443 617 459 637 3.30e-16 83.2
Msa1386420 AT1G02670.3 29.444 180 121 4 443 617 486 664 3.88e-16 82.8
Msa1386420 AT3G20010.3 35.833 120 77 0 487 606 624 743 5.73e-16 82.4
Msa1386420 AT3G20010.2 35.833 120 77 0 487 606 599 718 5.99e-16 82.4
Msa1386420 AT1G02670.7 29.444 180 121 4 443 617 463 641 6.37e-16 82.4
Msa1386420 AT1G02670.1 29.444 180 121 4 443 617 474 652 6.42e-16 82.4
Msa1386420 AT3G20010.1 35.833 120 77 0 487 606 890 1009 7.25e-16 82.4
Msa1386420 AT3G20010.5 35.833 120 77 0 487 606 890 1009 7.25e-16 82.4
Msa1386420 AT3G20010.7 35.833 120 77 0 487 606 890 1009 7.25e-16 82.4
Msa1386420 AT1G08600.1 34.899 149 83 2 473 607 1094 1242 7.28e-16 82.8
Msa1386420 AT1G08600.4 34.899 149 83 2 473 607 1115 1263 7.44e-16 82.8
Msa1386420 AT1G08600.3 34.899 149 83 2 473 607 1115 1263 7.44e-16 82.8
Msa1386420 AT1G08600.2 34.899 149 83 2 473 607 1115 1263 7.44e-16 82.8
Msa1386420 AT5G22750.1 31.724 145 98 1 473 617 863 1006 9.46e-16 82.0
Msa1386420 AT1G05120.2 29.221 154 105 2 457 606 687 840 9.61e-16 82.0
Msa1386420 AT1G05120.1 29.221 154 105 2 457 606 644 797 1.28e-15 81.6
Msa1386420 AT1G02670.5 29.114 158 107 3 443 595 459 616 3.85e-15 79.7
Msa1386420 AT1G02670.2 29.114 158 107 3 443 595 486 643 4.63e-15 79.3
Msa1386420 AT1G61140.3 25.197 254 175 4 367 613 844 1089 6.11e-15 79.7
Msa1386420 AT1G61140.1 25.197 254 175 4 367 613 1002 1247 7.36e-15 79.3
Msa1386420 AT1G11100.5 32.450 151 102 0 476 626 915 1065 1.93e-14 77.8
Msa1386420 AT1G11100.3 32.450 151 102 0 476 626 959 1109 1.96e-14 77.8
Msa1386420 AT1G11100.4 32.450 151 102 0 476 626 1102 1252 2.29e-14 77.8
Msa1386420 AT1G11100.1 32.450 151 102 0 476 626 1058 1208 2.38e-14 77.8
Msa1386420 AT1G11100.2 32.450 151 102 0 476 626 1101 1251 2.39e-14 77.8
Msa1386420 AT5G43530.1 32.090 134 89 1 473 604 1109 1242 3.61e-14 77.0
Msa1386420 AT1G50410.2 35.345 116 75 0 491 606 828 943 5.28e-14 76.3
Msa1386420 AT1G50410.1 35.345 116 75 0 491 606 828 943 5.28e-14 76.3
Msa1386420 AT1G50410.3 35.345 116 75 0 491 606 828 943 5.28e-14 76.3
Msa1386420 AT5G05130.1 31.538 130 86 2 491 618 727 855 8.94e-12 69.3
Msa1386420 AT3G19210.1 30.216 139 92 4 491 627 553 688 2.41e-11 67.8
Msa1386420 AT3G19210.3 30.216 139 92 4 491 627 553 688 2.44e-11 67.8
Msa1386420 AT3G19210.2 30.216 139 92 4 491 627 551 686 2.53e-11 67.8

Find 149 sgRNAs with CRISPR-Local

Find 93 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAGCAAACTGGAAAATT+TGG 0.138072 tig0020816:+46418 Msa1386420:CDS
ACTCATGGAGTCTGACTTTA+AGG 0.140657 tig0020816:+41274 Msa1386420:CDS
TGACTTAGCTGCCTTAATTT+TGG 0.169117 tig0020816:-44225 None:intergenic
ACAATTGGTTACAGAGTTTC+AGG 0.193655 tig0020816:+45667 Msa1386420:CDS
ATGAGTGTACTTTGCATCTT+TGG 0.225250 tig0020816:-41257 None:intergenic
CTGATCATCTGAGACCTTTA+AGG 0.228476 tig0020816:-46599 None:intergenic
AGTCAGTACCGGGGACGTTT+GGG 0.276859 tig0020816:-46715 None:intergenic
AATTTCTTATATTGGTATCT+AGG 0.278669 tig0020816:-36992 None:intergenic
ACTTGTTGCCTACGCTTTAC+AGG 0.279473 tig0020816:-43371 None:intergenic
TGCTTCTCTTCCGGTTATAA+AGG 0.283170 tig0020816:+42498 Msa1386420:CDS
TATAAGAATGTTCATGAATA+TGG 0.303993 tig0020816:+43119 Msa1386420:CDS
CAAAGCAAACTGGAAAATTT+GGG 0.305183 tig0020816:+46419 Msa1386420:CDS
CCAGCTGTTCTTGATTATCT+TGG 0.306687 tig0020816:+44532 Msa1386420:CDS
GAGTCAGTACCGGGGACGTT+TGG 0.318051 tig0020816:-46716 None:intergenic
ATTGATGGAGGCACACCTTC+TGG 0.318560 tig0020816:+45635 Msa1386420:CDS
CCGCTCAAATCCCAGTCTTC+TGG 0.327290 tig0020816:-37108 None:intergenic
AAGTGCTCTAGCAGCTGCTT+GGG 0.327593 tig0020816:-37322 None:intergenic
CATTTCAGCGAGACGGTATA+AGG 0.331209 tig0020816:+39337 Msa1386420:CDS
GGGGAGGAGGGTTTGAAGGG+TGG 0.337690 tig0020816:-37188 None:intergenic
GAGGGTTTGAAGGGTGGGAG+CGG 0.340125 tig0020816:-37182 None:intergenic
TGCTGTAGCTGCATGCGTTC+GGG 0.347595 tig0020816:+40766 Msa1386420:CDS
TTGCTGTAGCTGCATGCGTT+CGG 0.347916 tig0020816:+40765 Msa1386420:CDS
TAAAGAATTGACTAAAGTTT+CGG 0.354859 tig0020816:+37395 Msa1386420:CDS
AAGAAATTAGTTACTCTTTG+AGG 0.355154 tig0020816:-37219 None:intergenic
GGAATGCCAAAGAACGCTTA+TGG 0.355556 tig0020816:+37615 Msa1386420:CDS
GATGATTCGGAGGCTTAAAA+AGG 0.356401 tig0020816:+43331 Msa1386420:CDS
TAGGTTGTCTTATCTCAAAT+TGG 0.358678 tig0020816:+41137 Msa1386420:intron
GAACAACCATAAGCGTTCTT+TGG 0.360264 tig0020816:-37621 None:intergenic
GAGAACAACTGCTTCTCTTC+CGG 0.362729 tig0020816:+42489 Msa1386420:CDS
TGGATCCTCCAGGGAATGTT+TGG 0.365360 tig0020816:+43251 Msa1386420:intron
AAGCAGTTGTTCTCTTTGCC+TGG 0.369977 tig0020816:-42480 None:intergenic
TGGCCATGAGAACACCTTAA+AGG 0.373696 tig0020816:+46585 Msa1386420:CDS
CATATCTGGTTATAATGTTC+AGG 0.376340 tig0020816:+37685 Msa1386420:CDS
GTTGCTTGCATCCGGATTGA+TGG 0.386327 tig0020816:+45620 Msa1386420:CDS
GAGGGTAAAGGCCAAAATTA+AGG 0.386823 tig0020816:+44214 Msa1386420:CDS
TGCTTTGCAGGGCTACTCAA+TGG 0.388724 tig0020816:-46625 None:intergenic
GAAGTGCTCTAGCAGCTGCT+TGG 0.392231 tig0020816:-37323 None:intergenic
GACTCCTGGTGATCTAATTC+AGG 0.394051 tig0020816:+45934 Msa1386420:CDS
ATCAAGAACAGCTGGAATCT+TGG 0.396243 tig0020816:-44524 None:intergenic
GATATCATCAACTGTGTCAT+TGG 0.397023 tig0020816:-46283 None:intergenic
ATCTGCATTACGTTTGCAAT+GGG 0.398804 tig0020816:+40817 Msa1386420:CDS
AAGGTTCTTAAAGACATATC+TGG 0.399289 tig0020816:+37671 Msa1386420:CDS
TGTCGCATCTTCTGACAAAA+TGG 0.408653 tig0020816:-46660 None:intergenic
AATTTGCTTCATGTCCTTGT+CGG 0.410046 tig0020816:-43498 None:intergenic
GGGAGGAGGGTTTGAAGGGT+GGG 0.410241 tig0020816:-37187 None:intergenic
CTCTTTGTCAGAAGCCGAAA+AGG 0.416883 tig0020816:+37652 Msa1386420:CDS
GGGACTGGGGAAAACGTTGC+AGG 0.416967 tig0020816:+39525 Msa1386420:CDS
TTCTGGATCAAGGCAACAAT+TGG 0.416992 tig0020816:+45652 Msa1386420:CDS
CTAAACTATGCTGCTGGTGC+TGG 0.417428 tig0020816:+47211 Msa1386420:CDS
TGCCAAAAGCAAAATTCATC+TGG 0.418829 tig0020816:+41199 Msa1386420:CDS
AGAACTAGTACCTTTATAAC+CGG 0.430596 tig0020816:-42508 None:intergenic
TCATCTTTGCAGAATTGTCT+TGG 0.432588 tig0020816:+45912 Msa1386420:CDS
GAAGACCGCGTTCATAGAAT+TGG 0.435209 tig0020816:+45959 Msa1386420:CDS
CCGCAATGTTTCCAGTGGAA+TGG 0.440364 tig0020816:-37431 None:intergenic
AAGTAGGTGGTCAGCACAGC+TGG 0.442258 tig0020816:+47183 Msa1386420:intron
GACTTACACCCTTGCAATAC+CGG 0.442612 tig0020816:-43145 None:intergenic
AACATTGGTAGTGTTGTTTG+TGG 0.445669 tig0020816:-37364 None:intergenic
GGAATGTTTGGAGTTTATCA+AGG 0.450088 tig0020816:+43263 Msa1386420:CDS
ACTTGTTTGAATAGTTCAAT+TGG 0.450376 tig0020816:-42979 None:intergenic
CTATCAAAGCTGGAGGTGTC+GGG 0.454256 tig0020816:+45864 Msa1386420:CDS
CGACAACAGCACAGGTGGAT+TGG 0.455826 tig0020816:+46678 Msa1386420:CDS
AATTCTATGAACGCGGTCTT+CGG 0.457463 tig0020816:-45957 None:intergenic
TGAACATTCTTATACACATC+AGG 0.458677 tig0020816:-43110 None:intergenic
CAGCTAATACCTCGAAGATC+AGG 0.468996 tig0020816:-39152 None:intergenic
TTTGCAGTTGGAGAGGGTAA+AGG 0.470742 tig0020816:+44202 Msa1386420:intron
GGACACAGTGCAAAGCAAAC+TGG 0.473641 tig0020816:+46409 Msa1386420:CDS
CAACATTATCTCATATGATC+TGG 0.475954 tig0020816:+41232 Msa1386420:CDS
TTTAGCAGATGAAATGGGAC+TGG 0.477156 tig0020816:+39510 Msa1386420:CDS
GTTGTCTTATCTCAAATTGG+TGG 0.477189 tig0020816:+41140 Msa1386420:CDS
ATGTTCATGAATATGGTAAC+CGG 0.477761 tig0020816:+43126 Msa1386420:CDS
GGCAAAGTTTCAGTATGATC+AGG 0.478890 tig0020816:+37452 Msa1386420:CDS
TAGCATCAATCATTGGTAGA+TGG 0.478948 tig0020816:-45495 None:intergenic
AGCAGTTGTTCTCTTTGCCT+GGG 0.483187 tig0020816:-42479 None:intergenic
ACACAGTTGATGATATCATA+TGG 0.484288 tig0020816:+46289 Msa1386420:CDS
TAGTAATGGAACCAGAAGAC+TGG 0.487687 tig0020816:+37097 Msa1386420:exon
ACTTCTGTTCCTGATCTTCG+AGG 0.488114 tig0020816:+39143 Msa1386420:CDS
CAAATTGGTGGATCAAATAG+AGG 0.489834 tig0020816:+41152 Msa1386420:CDS
GGAATTGCACAATTTGATGA+AGG 0.495495 tig0020816:+43301 Msa1386420:CDS
CCAAGATAATCAAGAACAGC+TGG 0.495665 tig0020816:-44532 None:intergenic
TTATCTTGGAACTGTAATTG+AGG 0.497194 tig0020816:+44546 Msa1386420:CDS
CTGCATGCGTTCGGGATTCG+TGG 0.497784 tig0020816:+40774 Msa1386420:CDS
GTCAGTACCGGGGACGTTTG+GGG 0.498793 tig0020816:-46714 None:intergenic
AGTAATAGCACGTTGCACTA+AGG 0.499410 tig0020816:-39114 None:intergenic
TCTATCAAAGCTGGAGGTGT+CGG 0.499543 tig0020816:+45863 Msa1386420:CDS
TGAAGGCAACAACGATGATT+CGG 0.500616 tig0020816:+43318 Msa1386420:CDS
ATTGAATTGAAAGTTAGTAA+TGG 0.502940 tig0020816:+37083 Msa1386420:exon
GATGGTGCAAGTATGAGAAC+AGG 0.505461 tig0020816:-40797 None:intergenic
GTAATAGCACGTTGCACTAA+GGG 0.509793 tig0020816:-39113 None:intergenic
CAATATGCAATATTGCTTAG+TGG 0.510384 tig0020816:+42937 Msa1386420:CDS
CTTACAAGTATATCTGATGA+AGG 0.522829 tig0020816:-40952 None:intergenic
AACGCATGCAGCTACAGCAA+TGG 0.523209 tig0020816:-40762 None:intergenic
TTAGCAGATGAAATGGGACT+GGG 0.526530 tig0020816:+39511 Msa1386420:CDS
GCGACTCTAAACTATGCTGC+TGG 0.526739 tig0020816:+47205 Msa1386420:CDS
AAAAGCAAAATTCATCTGGA+TGG 0.528270 tig0020816:+41203 Msa1386420:CDS
CATCTGCATTACGTTTGCAA+TGG 0.531935 tig0020816:+40816 Msa1386420:CDS
CCGCGTTCATAGAATTGGCC+AGG 0.532078 tig0020816:+45964 Msa1386420:CDS
CTTTGCCGCAATGTTTCCAG+TGG 0.533959 tig0020816:-37436 None:intergenic
AAGGTGTGCCTCCATCAATC+CGG 0.538088 tig0020816:-45631 None:intergenic
TTCTTTAGAATGCTCAACAT+TGG 0.553595 tig0020816:-37379 None:intergenic
TCGTGTATAGCATCAATCAT+TGG 0.553777 tig0020816:-45502 None:intergenic
AAAGATGCAAAGTACACTCA+TGG 0.554876 tig0020816:+41259 Msa1386420:CDS
TCAATTGGTCGTGATAAAGC+AGG 0.559335 tig0020816:-42964 None:intergenic
GGCAGCTAAGTCACAAGAGG+AGG 0.562902 tig0020816:+44235 Msa1386420:CDS
TCAGTACCGGGGACGTTTGG+GGG 0.563359 tig0020816:-46713 None:intergenic
CATTGCAAACGTAATGCAGA+TGG 0.564847 tig0020816:-40815 None:intergenic
AGACCTTTAAGGTGTTCTCA+TGG 0.565748 tig0020816:-46588 None:intergenic
GAATGTTTGGAGTTTATCAA+GGG 0.566445 tig0020816:+43264 Msa1386420:CDS
TTACTCTTTGAGGACGTGAA+GGG 0.567286 tig0020816:-37209 None:intergenic
CTTCTTAGACTTGGCCGACA+AGG 0.568527 tig0020816:+43484 Msa1386420:CDS
GAGGCACACCTTCTGGATCA+AGG 0.569380 tig0020816:+45642 Msa1386420:CDS
CAAACTGGAAAATTTGGGGC+AGG 0.571966 tig0020816:+46424 Msa1386420:CDS
CTGTAGCTATCTATCAAAGC+TGG 0.572952 tig0020816:+45854 Msa1386420:intron
TTCTGCAAAGATGACTGTGC+TGG 0.574986 tig0020816:-45903 None:intergenic
ATATGGTAACCGGTATTGCA+AGG 0.575350 tig0020816:+43136 Msa1386420:CDS
GTTACTCTTTGAGGACGTGA+AGG 0.579225 tig0020816:-37210 None:intergenic
CTGAACTTCCTGTAAAGCGT+AGG 0.581689 tig0020816:+43363 Msa1386420:CDS
GCTTGCATCCGGATTGATGG+AGG 0.584560 tig0020816:+45623 Msa1386420:CDS
TTCAGGTTTATATTGCAGCA+TGG 0.591892 tig0020816:+39475 Msa1386420:intron
CTTCTGACAAAGAGGAGAGA+GGG 0.595533 tig0020816:-37643 None:intergenic
TCGGCCTGAATTAGATCACC+AGG 0.596283 tig0020816:-45938 None:intergenic
AGAAGATGCGACAACAGCAC+AGG 0.599595 tig0020816:+46670 Msa1386420:CDS
AGTGCTCTAGCAGCTGCTTG+GGG 0.601499 tig0020816:-37321 None:intergenic
TAAGGCAGCTAAGTCACAAG+AGG 0.602694 tig0020816:+44232 Msa1386420:CDS
AGATGCGACAACAGCACAGG+TGG 0.604898 tig0020816:+46673 Msa1386420:CDS
TACTCTTTGAGGACGTGAAG+GGG 0.605144 tig0020816:-37208 None:intergenic
TGATCTAGATGATTCAACAA+TGG 0.606143 tig0020816:+40920 Msa1386420:intron
AGTAATGGAACCAGAAGACT+GGG 0.609854 tig0020816:+37098 Msa1386420:exon
TTTGCAGGGCTACTCAATGG+TGG 0.619605 tig0020816:-46622 None:intergenic
TATGGTAACCGGTATTGCAA+GGG 0.625894 tig0020816:+43137 Msa1386420:CDS
AATTGTTGCCTTGATCCAGA+AGG 0.626088 tig0020816:-45650 None:intergenic
AATTAATGCTCTATTTCGTG+AGG 0.627475 tig0020816:+43517 Msa1386420:CDS
CCAGCTTTATACTGATTCTG+CGG 0.633599 tig0020816:+44498 Msa1386420:intron
ATTGGTGGATCAAATAGAGG+AGG 0.636256 tig0020816:+41155 Msa1386420:CDS
AGATACTATCAAGGCAGCAG+TGG 0.640507 tig0020816:+45694 Msa1386420:CDS
GCTTCTGACAAAGAGGAGAG+AGG 0.640656 tig0020816:-37644 None:intergenic
TCGAAGATCAGGAACAGAAG+TGG 0.641615 tig0020816:-39141 None:intergenic
TCAAGGGGCAAGTAATCATG+AGG 0.644332 tig0020816:+43280 Msa1386420:CDS
TAGCAGATGAAATGGGACTG+GGG 0.646169 tig0020816:+39512 Msa1386420:CDS
ACTCTTTGAGGACGTGAAGG+GGG 0.648158 tig0020816:-37207 None:intergenic
CGTCTCTTTCAAGAGAGTCG+AGG 0.651063 tig0020816:-37137 None:intergenic
CCATTCCACTGGAAACATTG+CGG 0.651817 tig0020816:+37431 Msa1386420:CDS
TAAACAGAATATGATTAACA+AGG 0.657232 tig0020816:+44277 Msa1386420:CDS
AAAGCAAACTGGAAAATTTG+GGG 0.668375 tig0020816:+46420 Msa1386420:CDS
AGGTTTATATTGCAGCATGG+AGG 0.670507 tig0020816:+39478 Msa1386420:intron
CCTGGCCAATTCTATGAACG+CGG 0.673699 tig0020816:-45964 None:intergenic
AATGTTTGGAGTTTATCAAG+GGG 0.675257 tig0020816:+43265 Msa1386420:CDS
CCAGAAGACTGGGATTTGAG+CGG 0.679302 tig0020816:+37108 Msa1386420:CDS
AGGCAACAACGATGATTCGG+AGG 0.682672 tig0020816:+43321 Msa1386420:CDS
TAGCTATCTATCAAAGCTGG+AGG 0.690993 tig0020816:+45857 Msa1386420:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATAATTTTTCACTTCATA+GGG + tig0020816:46388-46407 Msa1386420:intron 15.0%
!! AATTCCAAAGTAATATTATA+GGG - tig0020816:47041-47060 None:intergenic 15.0%
!! AAATTCCAAAGTAATATTAT+AGG - tig0020816:47042-47061 None:intergenic 15.0%
!! AATTTCTTATATTGGTATCT+AGG - tig0020816:36995-37014 None:intergenic 20.0%
!!! CTTATAATTTTTCACTTCAT+AGG + tig0020816:46387-46406 Msa1386420:intron 20.0%
!!! GTTGTTAAGTTGAAAAAGAA+AGG + tig0020816:46004-46023 Msa1386420:intron 25.0%
! GACTCAAAACTATAATGAAA+TGG + tig0020816:46734-46753 Msa1386420:intron 25.0%
!! ACACAGTTGATGATATCATA+TGG + tig0020816:46289-46308 Msa1386420:CDS 30.0%
!! AGTTGATGATATCATATGGT+AGG + tig0020816:46293-46312 Msa1386420:intron 30.0%
!!! ATGTTTTTTTTCAGTCCTCT+AGG + tig0020816:46320-46339 Msa1386420:intron 30.0%
CAAAGCAAACTGGAAAATTT+GGG + tig0020816:46419-46438 Msa1386420:CDS 30.0%
AAAGCAAACTGGAAAATTTG+GGG + tig0020816:46420-46439 Msa1386420:CDS 30.0%
TGAAAAATTCAGATGCTTGA+TGG + tig0020816:46565-46584 Msa1386420:intron 30.0%
!!! TTATAGTTTTGAGTCAGTAC+CGG - tig0020816:46729-46748 None:intergenic 30.0%
GCTTCCCTATAATATTACTT+TGG + tig0020816:47034-47053 Msa1386420:intron 30.0%
GTTCATACTTCATATGAAGT+AGG + tig0020816:47167-47186 Msa1386420:intron 30.0%
! CGTTTTATCAGATGTTACAA+TGG + tig0020816:47244-47263 Msa1386420:CDS 30.0%
! ATCACAGCACAGATTGTTTT+TGG - tig0020816:46203-46222 None:intergenic 35.0%
!!! ACTTTCTAGCTCTTGTTTTC+AGG + tig0020816:46230-46249 Msa1386420:intron 35.0%
GATATCATCAACTGTGTCAT+TGG - tig0020816:46286-46305 None:intergenic 35.0%
!!! TTTTTCAGTCCTCTAGGATT+TGG + tig0020816:46326-46345 Msa1386420:intron 35.0%
GCAAAGCAAACTGGAAAATT+TGG + tig0020816:46418-46437 Msa1386420:CDS 35.0%
!!! CAAGAGTTTTTTGCTTTGCA+GGG - tig0020816:46639-46658 None:intergenic 35.0%
!!! TCAAGAGTTTTTTGCTTTGC+AGG - tig0020816:46640-46659 None:intergenic 35.0%
!!! TATAGTTTTGAGTCAGTACC+GGG - tig0020816:46728-46747 None:intergenic 35.0%
TGCAACATTCTACATGTTCA+GGG - tig0020816:46995-47014 None:intergenic 35.0%
! TGGAATTTTGAATTGTCAGC+AGG + tig0020816:47054-47073 Msa1386420:intron 35.0%
TACTATAGATGCCTTTATCC+GGG - tig0020816:47126-47145 None:intergenic 35.0%
CTACTATAGATGCCTTTATC+CGG - tig0020816:47127-47146 None:intergenic 35.0%
CATACTTCATATGAAGTAGG+TGG + tig0020816:47170-47189 Msa1386420:intron 35.0%
AATTCTATGAACGCGGTCTT+CGG - tig0020816:45960-45979 None:intergenic 40.0%
CAACCAAGTTTGAGAATACC+TGG - tig0020816:45985-46004 None:intergenic 40.0%
AGTGCTAGTACTCTTACTGT+TGG - tig0020816:46074-46093 None:intergenic 40.0%
!!! CTCTTGTTTTCAGGAGTCTT+CGG + tig0020816:46239-46258 Msa1386420:intron 40.0%
!! AGACCTTTAAGGTGTTCTCA+TGG - tig0020816:46591-46610 None:intergenic 40.0%
! CTGATCATCTGAGACCTTTA+AGG - tig0020816:46602-46621 None:intergenic 40.0%
TGTCGCATCTTCTGACAAAA+TGG - tig0020816:46663-46682 None:intergenic 40.0%
!!! ATAGTTTTGAGTCAGTACCG+GGG - tig0020816:46727-46746 None:intergenic 40.0%
AATCCATAACTCCTGTGTCT+CGG + tig0020816:46763-46782 Msa1386420:intron 40.0%
TGATAGATAAGACGAGAGAG+AGG + tig0020816:46896-46915 Msa1386420:intron 40.0%
GATAGATAAGACGAGAGAGA+GGG + tig0020816:46897-46916 Msa1386420:intron 40.0%
ATCCGGATTCACTACCTTAA+AGG - tig0020816:46971-46990 None:intergenic 40.0%
GCAACATTCTACATGTTCAG+GGG - tig0020816:46994-47013 None:intergenic 40.0%
CTGCAACATTCTACATGTTC+AGG - tig0020816:46996-47015 None:intergenic 40.0%
GACTCCTGGTGATCTAATTC+AGG + tig0020816:45934-45953 Msa1386420:CDS 45.0%
GAAGACCGCGTTCATAGAAT+TGG + tig0020816:45959-45978 Msa1386420:CDS 45.0%
TGGCCAGGTATTCTCAAACT+TGG + tig0020816:45979-45998 Msa1386420:intron 45.0%
!! TTCAGTCCTCTAGGATTTGG+TGG + tig0020816:46329-46348 Msa1386420:intron 45.0%
TACCAACCACCAAATCCTAG+AGG - tig0020816:46338-46357 None:intergenic 45.0%
! CAAACTGGAAAATTTGGGGC+AGG + tig0020816:46424-46443 Msa1386420:CDS 45.0%
TGGCCATGAGAACACCTTAA+AGG + tig0020816:46585-46604 Msa1386420:CDS 45.0%
AGAGAGAGGGAGAGTAGTAT+AGG + tig0020816:46910-46929 Msa1386420:intron 45.0%
GAGAGATAGCCTCAAAGTCA+TGG + tig0020816:46934-46953 Msa1386420:intron 45.0%
GGAAAGTCACCATGACTTTG+AGG - tig0020816:46946-46965 None:intergenic 45.0%
GGATTCACTACCTTAAAGGC+GGG - tig0020816:46967-46986 None:intergenic 45.0%
CGGATTCACTACCTTAAAGG+CGG - tig0020816:46968-46987 None:intergenic 45.0%
!! CGCCTTTAAGGTAGTGAATC+CGG + tig0020816:46966-46985 Msa1386420:intron 45.0%
TTCTACATGTTCAGGGGATC+CGG - tig0020816:46988-47007 None:intergenic 45.0%
TTGTCAGCAGGTTCTCATAG+TGG + tig0020816:47066-47085 Msa1386420:intron 45.0%
GACTCTATGTTACTCACACC+CGG + tig0020816:47105-47124 Msa1386420:intron 45.0%
TGTTACTCACACCCGGATAA+AGG + tig0020816:47112-47131 Msa1386420:intron 45.0%
!!! TTTTAATTAATTTCTTATAT+TGG - tig0020816:37003-37022 None:intergenic 5.0%
!! TATTATTATTATTATTATCA+TGG - tig0020816:41938-41957 None:intergenic 5.0%
TCGGCCTGAATTAGATCACC+AGG - tig0020816:45941-45960 None:intergenic 50.0%
CCTGGCCAATTCTATGAACG+CGG - tig0020816:45967-45986 None:intergenic 50.0%
!! GTCCTCTAGGATTTGGTGGT+TGG + tig0020816:46333-46352 Msa1386420:intron 50.0%
GGACACAGTGCAAAGCAAAC+TGG + tig0020816:46409-46428 Msa1386420:CDS 50.0%
TTTGCAGGGCTACTCAATGG+TGG - tig0020816:46625-46644 None:intergenic 50.0%
TGCTTTGCAGGGCTACTCAA+TGG - tig0020816:46628-46647 None:intergenic 50.0%
AGAAGATGCGACAACAGCAC+AGG + tig0020816:46670-46689 Msa1386420:CDS 50.0%
TTGCCGAGACACAGGAGTTA+TGG - tig0020816:46769-46788 None:intergenic 50.0%
TCGGCAAGCATGTTCACATC+AGG + tig0020816:46782-46801 Msa1386420:intron 50.0%
CGGCAAGCATGTTCACATCA+GGG + tig0020816:46783-46802 Msa1386420:intron 50.0%
GGCAAGCATGTTCACATCAG+GGG + tig0020816:46784-46803 Msa1386420:intron 50.0%
AGCATGTTCACATCAGGGGA+TGG + tig0020816:46788-46807 Msa1386420:intron 50.0%
GCATGTTCACATCAGGGGAT+GGG + tig0020816:46789-46808 Msa1386420:intron 50.0%
GGGATGGGATTGAGTGACTT+CGG + tig0020816:46804-46823 Msa1386420:intron 50.0%
ATGGGATTGAGTGACTTCGG+TGG + tig0020816:46807-46826 Msa1386420:intron 50.0%
TGGTGACTTTCCCGCCTTTA+AGG + tig0020816:46954-46973 Msa1386420:intron 50.0%
GCGACTCTAAACTATGCTGC+TGG + tig0020816:47205-47224 Msa1386420:CDS 50.0%
CTAAACTATGCTGCTGGTGC+TGG + tig0020816:47211-47230 Msa1386420:CDS 50.0%
CCGCGTTCATAGAATTGGCC+AGG + tig0020816:45964-45983 Msa1386420:CDS 55.0%
AGATGCGACAACAGCACAGG+TGG + tig0020816:46673-46692 Msa1386420:CDS 55.0%
CGACAACAGCACAGGTGGAT+TGG + tig0020816:46678-46697 Msa1386420:CDS 55.0%
! AGTCAGTACCGGGGACGTTT+GGG - tig0020816:46718-46737 None:intergenic 55.0%
GAACATGCTTGCCGAGACAC+AGG - tig0020816:46777-46796 None:intergenic 55.0%
GGATTGAGTGACTTCGGTGG+CGG + tig0020816:46810-46829 Msa1386420:intron 55.0%
GATTGAGTGACTTCGGTGGC+GGG + tig0020816:46811-46830 Msa1386420:intron 55.0%
AAGTAGGTGGTCAGCACAGC+TGG + tig0020816:47183-47202 Msa1386420:intron 55.0%
AGTCAACCCCCAAACGTCCC+CGG + tig0020816:46707-46726 Msa1386420:CDS 60.0%
! TCAGTACCGGGGACGTTTGG+GGG - tig0020816:46716-46735 None:intergenic 60.0%
! GTCAGTACCGGGGACGTTTG+GGG - tig0020816:46717-46736 None:intergenic 60.0%
! GAGTCAGTACCGGGGACGTT+TGG - tig0020816:46719-46738 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0020816 gene 36986 47285 36986 ID=Msa1386420;Name=Msa1386420
tig0020816 mRNA 36986 47285 36986 ID=Msa1386420-mRNA-1;Parent=Msa1386420;Name=Msa1386420-mRNA-1;_AED=0.17;_eAED=0.18;_QI=116|0.95|0.91|1|1|1|23|0|701
tig0020816 exon 36986 37227 36986 ID=Msa1386420-mRNA-1:exon:10127;Parent=Msa1386420-mRNA-1
tig0020816 exon 37309 37473 37309 ID=Msa1386420-mRNA-1:exon:10128;Parent=Msa1386420-mRNA-1
tig0020816 exon 37575 37706 37575 ID=Msa1386420-mRNA-1:exon:10129;Parent=Msa1386420-mRNA-1
tig0020816 exon 39098 39164 39098 ID=Msa1386420-mRNA-1:exon:10130;Parent=Msa1386420-mRNA-1
tig0020816 exon 39292 39358 39292 ID=Msa1386420-mRNA-1:exon:10131;Parent=Msa1386420-mRNA-1
tig0020816 exon 39480 39546 39480 ID=Msa1386420-mRNA-1:exon:10132;Parent=Msa1386420-mRNA-1
tig0020816 exon 40761 40844 40761 ID=Msa1386420-mRNA-1:exon:10133;Parent=Msa1386420-mRNA-1
tig0020816 exon 40928 40969 40928 ID=Msa1386420-mRNA-1:exon:10134;Parent=Msa1386420-mRNA-1
tig0020816 exon 41140 41295 41140 ID=Msa1386420-mRNA-1:exon:10135;Parent=Msa1386420-mRNA-1
tig0020816 exon 42442 42519 42442 ID=Msa1386420-mRNA-1:exon:10136;Parent=Msa1386420-mRNA-1
tig0020816 exon 42931 42999 42931 ID=Msa1386420-mRNA-1:exon:10137;Parent=Msa1386420-mRNA-1
tig0020816 exon 43095 43160 43095 ID=Msa1386420-mRNA-1:exon:10138;Parent=Msa1386420-mRNA-1
tig0020816 exon 43263 43391 43263 ID=Msa1386420-mRNA-1:exon:10139;Parent=Msa1386420-mRNA-1
tig0020816 exon 43482 43538 43482 ID=Msa1386420-mRNA-1:exon:10140;Parent=Msa1386420-mRNA-1
tig0020816 exon 44209 44298 44209 ID=Msa1386420-mRNA-1:exon:10141;Parent=Msa1386420-mRNA-1
tig0020816 exon 44502 44567 44502 ID=Msa1386420-mRNA-1:exon:10142;Parent=Msa1386420-mRNA-1
tig0020816 exon 45466 45534 45466 ID=Msa1386420-mRNA-1:exon:10143;Parent=Msa1386420-mRNA-1
tig0020816 exon 45611 45715 45611 ID=Msa1386420-mRNA-1:exon:10144;Parent=Msa1386420-mRNA-1
tig0020816 exon 45860 45985 45860 ID=Msa1386420-mRNA-1:exon:10145;Parent=Msa1386420-mRNA-1
tig0020816 exon 46252 46310 46252 ID=Msa1386420-mRNA-1:exon:10146;Parent=Msa1386420-mRNA-1
tig0020816 exon 46409 46445 46409 ID=Msa1386420-mRNA-1:exon:10147;Parent=Msa1386420-mRNA-1
tig0020816 exon 46577 46728 46577 ID=Msa1386420-mRNA-1:exon:10148;Parent=Msa1386420-mRNA-1
tig0020816 exon 47189 47285 47189 ID=Msa1386420-mRNA-1:exon:10149;Parent=Msa1386420-mRNA-1
tig0020816 five_prime_UTR 36986 37101 36986 ID=Msa1386420-mRNA-1:five_prime_utr;Parent=Msa1386420-mRNA-1
tig0020816 CDS 37102 37227 37102 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 37309 37473 37309 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 37575 37706 37575 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 39098 39164 39098 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 39292 39358 39292 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 39480 39546 39480 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 40761 40844 40761 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 40928 40969 40928 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 41140 41295 41140 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 42442 42519 42442 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 42931 42999 42931 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 43095 43160 43095 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 43263 43391 43263 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 43482 43538 43482 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 44209 44298 44209 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 44502 44567 44502 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 45466 45534 45466 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 45611 45715 45611 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 45860 45985 45860 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 46252 46310 46252 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 46409 46445 46409 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 46577 46728 46577 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
tig0020816 CDS 47189 47285 47189 ID=Msa1386420-mRNA-1:cds;Parent=Msa1386420-mRNA-1
Gene Sequence

>Msa1386420

ATGGAACCAGAAGACTGGGATTTGAGCGGTGAAGACCTCGACTCTCTTGAAAGAGACGCTTTCCAGAAAATCGCTCAACTCCGCTCCCACCCTTCAAACCCTCCTCCCCCTTCACGTCCTCAAAGAGTTGATGCTTTGCCCCAAGCAGCTGCTAGAGCACTTCCAACGTCGATAAAATCAGCCACAAACAACACTACCAATGTTGAGCATTCTAAAGAATTGACTAAAGTTTCGGTCAAATTTTTTCTCCATTCCACTGGAAACATTGCGGCAAAGTTTCAGTATGATCAGGTAATAGTTGCTGCTTTTAGAAGAATCCCTAAATCTTTTTGGAATGCCAAAGAACGCTTATGGTTGTTCCCTCTCTCCTCTTTGTCAGAAGCCGAAAAGGTTCTTAAAGACATATCTGGTTATAATGTTCAGGTGGAGAACTTGGATCCCTTAGTGCAACGTGCTATTACTGCTGCCACTTCTGTTCCTGATCTTCGAGATCGATATGATAAGATCCCTAGCGATGTTGAATCAAAACTTTTGCCATTTCAGCGAGACGGTATAAGGTTTATATTGCAGCATGGAGGTCGTGCTTTTTTAGCAGATGAAATGGGACTGGGGAAAACGTTGCAGGCCATTGCTGTAGCTGCATGCGTTCGGGATTCGTGGCCTGTTCTCATACTTGCACCATCTGCATTACGTTTGCAATGGGCTTCTATGATTCAACAATGGCTGAATATTCCTTCATCAGATATACTTGTTGTCTTATCTCAAATTGGTGGATCAAATAGAGGAGGTTTCAATATAGTATCTTCAAGTGCCAAAAGCAAAATTCATCTGGATGGACTATTCAACATTATCTCATATGATCTGGTGCCAAAGATGCAAAGTACACTCATGGAGTCTGACTTTAAGGTTGTAATTGCTGATGAGTCACACTTTCTGAAAAATGCCCAGGCAAAGAGAACAACTGCTTCTCTTCCGGTTATAAAGAAAGCACAATATGCAATATTGCTTAGTGGAACTCCTGCTTTATCACGACCAATTGAACTATTCAAACAACTGGAAGCTTTGTATCCTGATGTGTATAAGAATGTTCATGAATATGGTAACCGGTATTGCAAGGGTGGAATGTTTGGAGTTTATCAAGGGGCAAGTAATCATGAGGAATTGCACAATTTGATGAAGGCAACAACGATGATTCGGAGGCTTAAAAAGGATGTTCTTTCTGAACTTCCTGTAAAGCGTAGGCAACAAGTCTTCTTAGACTTGGCCGACAAGGACATGAAGCAAATTAATGCTCTATTTCGTGAGTTGGAGAGGGTAAAGGCCAAAATTAAGGCAGCTAAGTCACAAGAGGAGGCTGAATCACTCAAGTTTTCTAAACAGAATATGATTAACAAGCTTTATACTGATTCTGCGGAAGCCAAGATTCCAGCTGTTCTTGATTATCTTGGAACTGTAATTGAGGCAGGCTGCAAGTTTCTTATATTTGCACACCATCTACCAATGATTGATGCTATACACGAGTTTCTTCTTAAAAAAAAGGTTGCTTGCATCCGGATTGATGGAGGCACACCTTCTGGATCAAGGCAACAATTGGTTACAGAGTTTCAGGAAAAAGATACTATCAAGGCAGCAGTGCTATCTATCAAAGCTGGAGGTGTCGGGTTAACATTGACTGCTGCCAGCACAGTCATCTTTGCAGAATTGTCTTGGACTCCTGGTGATCTAATTCAGGCCGAAGACCGCGTTCATAGAATTGGCCAGGAGTCTTCGGTAAATATATACTACTTGCTTGCCAATGACACAGTTGATGATATCATATGGGACACAGTGCAAAGCAAACTGGAAAATTTGGGGCAGATGCTTGATGGCCATGAGAACACCTTAAAGGTCTCAGATGATCAGCCACCATTGAGTAGCCCTGCAAAGCAAAAAACTCTTGACCATTTTGTCAGAAGATGCGACAACAGCACAGGTGGATTGGAACATCAGTCAACCCCCAAACGTCCCCGGTGGTCAGCACAGCTGGCGACTCTAAACTATGCTGCTGGTGCTGGAAAAGCTGATCGTTTTATCAGATGTTACAATGGTTATGAAGTCTCCCAATAG
Protein sequence

>Msa1386420

MEPEDWDLSGEDLDSLERDAFQKIAQLRSHPSNPPPPSRPQRVDALPQAAARALPTSIKSATNNTTNVEHSKELTKVSVKFFLHSTGNIAAKFQYDQVIVAAFRRIPKSFWNAKERLWLFPLSSLSEAEKVLKDISGYNVQVENLDPLVQRAITAATSVPDLRDRYDKIPSDVESKLLPFQRDGIRFILQHGGRAFLADEMGLGKTLQAIAVAACVRDSWPVLILAPSALRLQWASMIQQWLNIPSSDILVVLSQIGGSNRGGFNIVSSSAKSKIHLDGLFNIISYDLVPKMQSTLMESDFKVVIADESHFLKNAQAKRTTASLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGMFGVYQGASNHEELHNLMKATTMIRRLKKDVLSELPVKRRQQVFLDLADKDMKQINALFRELERVKAKIKAAKSQEEAESLKFSKQNMINKLYTDSAEAKIPAVLDYLGTVIEAGCKFLIFAHHLPMIDAIHEFLLKKKVACIRIDGGTPSGSRQQLVTEFQEKDTIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRVHRIGQESSVNIYYLLANDTVDDIIWDTVQSKLENLGQMLDGHENTLKVSDDQPPLSSPAKQKTLDHFVRRCDNSTGGLEHQSTPKRPRWSAQLATLNYAAGAGKADRFIRCYNGYEVSQ*