Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1387160 | XP_003628627.3 | 95.722 | 374 | 15 | 1 | 1 | 374 | 1 | 373 | 0.0 | 715 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1387160 | sp|O04529|2MMP_ARATH | 58.721 | 344 | 129 | 7 | 12 | 345 | 6 | 346 | 6.41e-135 | 393 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1387160 | G7LEQ8 | 95.722 | 374 | 15 | 1 | 1 | 374 | 1 | 373 | 0.0 | 715 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1387160 | Msa1397910 | 0.995842 | 1.718376e-220 | -8.615850e-47 |
Msa0817190 | Msa1387160 | 0.804891 | 1.737610e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1387160 | MtrunA17_Chr8g0364281 | 95.722 | 374 | 15 | 1 | 1 | 374 | 38 | 410 | 0.0 | 713 |
Msa1387160 | MtrunA17_Chr5g0414891 | 64.392 | 337 | 110 | 3 | 15 | 348 | 19 | 348 | 5.74e-161 | 456 |
Msa1387160 | MtrunA17_Chr5g0399301 | 47.368 | 323 | 143 | 5 | 23 | 339 | 25 | 326 | 3.28e-96 | 290 |
Msa1387160 | MtrunA17_Chr8g0334661 | 45.902 | 305 | 143 | 7 | 48 | 345 | 39 | 328 | 1.17e-82 | 256 |
Msa1387160 | MtrunA17_Chr5g0414641 | 39.623 | 318 | 154 | 9 | 19 | 328 | 34 | 321 | 7.19e-61 | 199 |
Msa1387160 | MtrunA17_Chr6g0451671 | 35.179 | 307 | 156 | 7 | 45 | 325 | 40 | 329 | 5.15e-54 | 181 |
Msa1387160 | MtrunA17_Chr5g0414654 | 37.107 | 318 | 145 | 8 | 10 | 325 | 9 | 273 | 1.09e-49 | 169 |
Msa1387160 | MtrunA17_Chr5g0414657 | 36.036 | 333 | 167 | 9 | 10 | 325 | 9 | 312 | 1.36e-48 | 167 |
Msa1387160 | MtrunA17_Chr5g0414661 | 35.862 | 290 | 140 | 9 | 62 | 335 | 35 | 294 | 1.65e-43 | 153 |
Msa1387160 | MtrunA17_Chr5g0414791 | 36.426 | 291 | 142 | 10 | 58 | 339 | 87 | 343 | 1.60e-42 | 152 |
Msa1387160 | MtrunA17_Chr5g0414821 | 34.915 | 295 | 147 | 12 | 54 | 339 | 108 | 366 | 1.95e-38 | 141 |
Msa1387160 | MtrunA17_Chr5g0414771 | 35.943 | 281 | 148 | 9 | 59 | 332 | 4 | 259 | 1.42e-37 | 137 |
Msa1387160 | MtrunA17_Chr5g0414831 | 42.500 | 120 | 66 | 3 | 188 | 304 | 1 | 120 | 1.67e-17 | 78.2 |
Msa1387160 | MtrunA17_Chr5g0414801 | 43.421 | 76 | 40 | 2 | 53 | 127 | 66 | 139 | 6.31e-12 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1387160 | AT1G70170.1 | 58.721 | 344 | 129 | 7 | 12 | 345 | 6 | 346 | 6.52e-136 | 393 |
Msa1387160 | AT1G24140.1 | 57.975 | 326 | 129 | 4 | 31 | 348 | 28 | 353 | 1.40e-131 | 382 |
Msa1387160 | AT1G59970.1 | 52.547 | 373 | 143 | 11 | 16 | 374 | 6 | 358 | 5.66e-117 | 344 |
Msa1387160 | AT4G16640.1 | 47.756 | 312 | 138 | 7 | 43 | 350 | 52 | 342 | 2.49e-86 | 266 |
Msa1387160 | AT2G45040.1 | 48.805 | 293 | 120 | 7 | 61 | 347 | 50 | 318 | 1.10e-82 | 256 |
Find 125 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCTCACATTTCTTATTAT+AGG | 0.190144 | tig0020882:-68219 | None:intergenic |
TGTGTCCTTGCCGGCGTTCA+TGG | 0.279300 | tig0020882:+68925 | None:intergenic |
AGGGGAATTCAATATTTATA+TGG | 0.304659 | tig0020882:-68368 | Msa1387160:CDS |
CATGAGATTGGGCATTTGTT+AGG | 0.306029 | tig0020882:-68479 | Msa1387160:CDS |
GGGCCGACCCGGGGAGTGCC+GGG | 0.329573 | tig0020882:+69220 | None:intergenic |
CGTTGTTTCTGTGTCCTTGC+CGG | 0.339334 | tig0020882:+68916 | None:intergenic |
CGGGCCGACCCGGGGAGTGC+CGG | 0.340426 | tig0020882:+69219 | None:intergenic |
ACCTTGACGCTGCAGAGGAC+TGG | 0.343059 | tig0020882:-68568 | Msa1387160:CDS |
CATTGAGATTGAAATTCTTC+TGG | 0.355467 | tig0020882:+69032 | None:intergenic |
GCAGAGGACTGGGTAGTTTC+CGG | 0.362710 | tig0020882:-68557 | Msa1387160:CDS |
ATTGGGCATTTGTTAGGATT+AGG | 0.367696 | tig0020882:-68473 | Msa1387160:CDS |
TCAGGCGCTGATATTAAGAT+TGG | 0.370272 | tig0020882:-68683 | Msa1387160:CDS |
AGGCATCCCACGGGCCGACC+CGG | 0.374549 | tig0020882:+69209 | None:intergenic |
CTCCGGCCACCGTGGTTGAC+CGG | 0.386887 | tig0020882:+68838 | None:intergenic |
ACAGCCTCACTTCTTCTTTG+TGG | 0.398951 | tig0020882:-68277 | Msa1387160:CDS |
GAGGCTGTAACCACCGTTGC+CGG | 0.407385 | tig0020882:+68292 | None:intergenic |
TCAGTGGCGGTGCATGAGAT+TGG | 0.416703 | tig0020882:-68491 | Msa1387160:CDS |
GGCATCCCACGGGCCGACCC+GGG | 0.433619 | tig0020882:+69210 | None:intergenic |
TCACATTTCACAGTCTTTCC+CGG | 0.434382 | tig0020882:-68857 | Msa1387160:CDS |
GCCTGAATATAACGTTGTTT+CGG | 0.442318 | tig0020882:+68700 | None:intergenic |
TCATCGGAGAAATTTGATTC+CGG | 0.445302 | tig0020882:+69091 | None:intergenic |
GGTATCCAAGAGGGGACGTC+GGG | 0.448914 | tig0020882:+69244 | None:intergenic |
TCCCGGTCAACCACGGTGGC+CGG | 0.450744 | tig0020882:-68840 | Msa1387160:CDS |
ATGCTTTCTCTCCAAGGAAC+GGG | 0.452189 | tig0020882:-68598 | Msa1387160:CDS |
AATTTCAATCTCAATGTAAC+CGG | 0.458242 | tig0020882:-69025 | Msa1387160:CDS |
CAGTGGCGGTGCATGAGATT+GGG | 0.462850 | tig0020882:-68490 | Msa1387160:CDS |
AGAGAGAATGAAAATGTGAA+AGG | 0.466519 | tig0020882:+69298 | None:intergenic |
AATTTCACCGGCTGCCATCA+AGG | 0.468116 | tig0020882:-69181 | Msa1387160:CDS |
GAGCCGTTTGACGGAAGCTT+AGG | 0.469950 | tig0020882:-68632 | Msa1387160:CDS |
GAAATTTGATTCCGGCGAGC+GGG | 0.474085 | tig0020882:+69099 | None:intergenic |
ACGGTGGCCGGAGGGAAAGC+AGG | 0.474686 | tig0020882:-68828 | Msa1387160:CDS |
AGGTGAAACCTCCCGTTCCT+TGG | 0.476396 | tig0020882:+68587 | None:intergenic |
ACCGAAACAACGTTATATTC+AGG | 0.482978 | tig0020882:-68701 | Msa1387160:CDS |
AGAAATTTGATTCCGGCGAG+CGG | 0.487702 | tig0020882:+69098 | None:intergenic |
GTTTCTGTAAGTTCGTTACC+AGG | 0.489394 | tig0020882:+68785 | None:intergenic |
ATGGTGGAGCCATTGAAACT+AGG | 0.491172 | tig0020882:+68338 | None:intergenic |
GGAGATGGCGAGCCGTTTGA+CGG | 0.495061 | tig0020882:-68641 | Msa1387160:CDS |
GATGCCTTTCGCAATTTCAC+CGG | 0.496697 | tig0020882:-69193 | Msa1387160:CDS |
TCCGGCCACCGTGGTTGACC+GGG | 0.503089 | tig0020882:+68839 | None:intergenic |
GAGATCATCGTCGAAGTCAT+CGG | 0.503223 | tig0020882:+69075 | None:intergenic |
GGTACTAACCCTAGTTTCAA+TGG | 0.504380 | tig0020882:-68347 | Msa1387160:CDS |
TGCTGGCTGAAGATGATGTA+AGG | 0.505840 | tig0020882:-68388 | Msa1387160:CDS |
CTAACCTACGCGTTCTTCCC+TGG | 0.511222 | tig0020882:-68803 | Msa1387160:CDS |
CCTTGACGCTGCAGAGGACT+GGG | 0.516508 | tig0020882:-68567 | Msa1387160:CDS |
GGCGTAGCGGATATCATTAA+CGG | 0.519895 | tig0020882:-68956 | Msa1387160:CDS |
CTGTGAAATGTGATACTGTA+TGG | 0.521898 | tig0020882:+68867 | None:intergenic |
GAGAGAATGAAAATGTGAAA+GGG | 0.523940 | tig0020882:+69299 | None:intergenic |
CTCCACCATCACGTCGTCAC+CGG | 0.525098 | tig0020882:-68324 | Msa1387160:CDS |
CTTCTTCTTTGTGGTTCCCG+TGG | 0.525899 | tig0020882:-68268 | Msa1387160:CDS |
ATTAAGATTGGATTCTTCAA+CGG | 0.529726 | tig0020882:-68671 | Msa1387160:CDS |
TGGTGGAGCCATTGAAACTA+GGG | 0.533361 | tig0020882:+68339 | None:intergenic |
CGGTTACATTCCCCGCTCGC+CGG | 0.541508 | tig0020882:-69110 | Msa1387160:CDS |
ATTAGGTCACTCGTCGGTGG+AGG | 0.542053 | tig0020882:-68456 | Msa1387160:CDS |
GGATTCTTCAACGGCGACCA+TGG | 0.542740 | tig0020882:-68662 | Msa1387160:CDS |
GAGATTGAAATTCTTCTGGT+AGG | 0.547482 | tig0020882:+69036 | None:intergenic |
TGGCGCATGCTTTCTCTCCA+AGG | 0.548235 | tig0020882:-68604 | Msa1387160:CDS |
TCGTCACCGGAGAGGAATAC+CGG | 0.550247 | tig0020882:-68311 | Msa1387160:CDS |
GTTCCTAAGCTTCCGTCAAA+CGG | 0.550741 | tig0020882:+68629 | None:intergenic |
CGGTCAACCACGGTGGCCGG+AGG | 0.551139 | tig0020882:-68837 | Msa1387160:CDS |
CAAACGGCTCGCCATCTCCA+TGG | 0.551751 | tig0020882:+68645 | None:intergenic |
GTTAGCTCCTGCTTTCCCTC+CGG | 0.552722 | tig0020882:+68821 | None:intergenic |
AGTAGTTCTTTAAATTAGAG+AGG | 0.554718 | tig0020882:+69143 | None:intergenic |
TGCTTTCCCTCCGGCCACCG+TGG | 0.558673 | tig0020882:+68830 | None:intergenic |
AACAGCGTTTGCACGGTGGT+CGG | 0.559595 | tig0020882:-68744 | Msa1387160:CDS |
CCGTTGCCGGTATTCCTCTC+CGG | 0.560708 | tig0020882:+68305 | None:intergenic |
AAGAACTACTTCCAACACTT+CGG | 0.561625 | tig0020882:-69130 | Msa1387160:CDS |
ACGGATGAAGAAAGTAGTGC+TGG | 0.562431 | tig0020882:-68405 | Msa1387160:CDS |
CTCCGGTGACGACGTGATGG+TGG | 0.568349 | tig0020882:+68322 | None:intergenic |
AGAATGAAAATGTGAAAGGG+AGG | 0.568946 | tig0020882:+69302 | None:intergenic |
TCTTCGCAACAGCGTTTGCA+CGG | 0.569638 | tig0020882:-68751 | Msa1387160:CDS |
CCCAGTCCTCTGCAGCGTCA+AGG | 0.569873 | tig0020882:+68567 | None:intergenic |
GATTCTAAATCCACCGCAGT+TGG | 0.572285 | tig0020882:+68512 | None:intergenic |
AAATTTGATTCCGGCGAGCG+GGG | 0.579169 | tig0020882:+69100 | None:intergenic |
CATGCTTTCTCTCCAAGGAA+CGG | 0.580918 | tig0020882:-68599 | Msa1387160:CDS |
AACGTGGTAGCATGACCTGC+CGG | 0.584798 | tig0020882:+68981 | None:intergenic |
TTCAACGGCGACCATGGAGA+TGG | 0.585165 | tig0020882:-68656 | Msa1387160:CDS |
GTTTCACCTTGACGCTGCAG+AGG | 0.589826 | tig0020882:-68573 | Msa1387160:CDS |
AGTCATGTCGTCGAGCTCAC+CGG | 0.590938 | tig0020882:+69006 | None:intergenic |
TGCGGTGGATTTAGAATCAG+TGG | 0.593068 | tig0020882:-68507 | Msa1387160:CDS |
CTTTCTCTCCAAGGAACGGG+AGG | 0.593143 | tig0020882:-68595 | Msa1387160:CDS |
GTGCCGGGAGGTATCCAAGA+GGG | 0.593782 | tig0020882:+69235 | None:intergenic |
AAATTGCGAAAGGCATCCCA+CGG | 0.595285 | tig0020882:+69199 | None:intergenic |
AACAGAGAGAAAAGTCTCCA+CGG | 0.595850 | tig0020882:+68251 | None:intergenic |
CCTCTCCGGTGACGACGTGA+TGG | 0.596587 | tig0020882:+68319 | None:intergenic |
TGCCGGGAGGTATCCAAGAG+GGG | 0.597745 | tig0020882:+69236 | None:intergenic |
TGACGGAAGCTTAGGAACGC+TGG | 0.602552 | tig0020882:-68624 | Msa1387160:CDS |
GGGGAATGTAACCGAAGTGT+TGG | 0.602813 | tig0020882:+69119 | None:intergenic |
AGCGTTTGCACGGTGGTCGG+AGG | 0.605846 | tig0020882:-68741 | Msa1387160:CDS |
AGGTATCCAAGAGGGGACGT+CGG | 0.606793 | tig0020882:+69243 | None:intergenic |
AGCTCGACGACATGACTCTC+CGG | 0.609131 | tig0020882:-69000 | Msa1387160:CDS |
CCTCCCGGCACTCCCCGGGT+CGG | 0.609284 | tig0020882:-69223 | Msa1387160:CDS |
GTTAGGATTAGGTCACTCGT+CGG | 0.612532 | tig0020882:-68462 | Msa1387160:CDS |
CGACGACATGACTCTCCGGC+AGG | 0.614104 | tig0020882:-68996 | Msa1387160:CDS |
CAGTCTTTCCCGGTCAACCA+CGG | 0.614184 | tig0020882:-68847 | Msa1387160:CDS |
ACAGAGAGAAAAGTCTCCAC+GGG | 0.617841 | tig0020882:+68252 | None:intergenic |
GGTCAACCACGGTGGCCGGA+GGG | 0.618646 | tig0020882:-68836 | Msa1387160:CDS |
AACTACCATGAACGCCGGCA+AGG | 0.625626 | tig0020882:-68930 | Msa1387160:CDS |
GTCCCCTCTTGGATACCTCC+CGG | 0.630970 | tig0020882:-69238 | Msa1387160:CDS |
AGGATTAGGTCACTCGTCGG+TGG | 0.634188 | tig0020882:-68459 | Msa1387160:CDS |
GTCGTCGTTACCAACTGCGG+TGG | 0.637199 | tig0020882:-68522 | Msa1387160:CDS |
CCGGAGAGGAATACCGGCAA+CGG | 0.639450 | tig0020882:-68305 | Msa1387160:CDS |
TTCATCCGTGACGATATCGT+CGG | 0.640422 | tig0020882:+68419 | None:intergenic |
AATTGCGAAAGGCATCCCAC+GGG | 0.643400 | tig0020882:+69200 | None:intergenic |
AGTGCCGGGAGGTATCCAAG+AGG | 0.644275 | tig0020882:+69234 | None:intergenic |
TTTCTGTAAGTTCGTTACCA+GGG | 0.652661 | tig0020882:+68786 | None:intergenic |
GAGAGGAATACCGGCAACGG+TGG | 0.653792 | tig0020882:-68302 | Msa1387160:CDS |
GCTGGCTGAAGATGATGTAA+GGG | 0.654357 | tig0020882:-68387 | Msa1387160:CDS |
GCTACCACGTTGCGGCGTAG+CGG | 0.663069 | tig0020882:-68969 | Msa1387160:CDS |
GCAGCCGGTGAAATTGCGAA+AGG | 0.667426 | tig0020882:+69189 | None:intergenic |
GGAACCACAAAGAAGAAGTG+AGG | 0.678184 | tig0020882:+68273 | None:intergenic |
CCATCACGTCGTCACCGGAG+AGG | 0.679279 | tig0020882:-68319 | Msa1387160:CDS |
GTTACCAGGGAAGAACGCGT+AGG | 0.683343 | tig0020882:+68799 | None:intergenic |
CAGGTCATGCTACCACGTTG+CGG | 0.692886 | tig0020882:-68977 | Msa1387160:CDS |
TGTTTCCGACGATATCGTCA+CGG | 0.697523 | tig0020882:-68424 | Msa1387160:CDS |
CAAACAGTGACAGCAAGCTG+CGG | 0.704212 | tig0020882:-68892 | Msa1387160:CDS |
TCGCAACAGCGTTTGCACGG+TGG | 0.704349 | tig0020882:-68748 | Msa1387160:CDS |
ATAGACGAGCAGAAACAATG+AGG | 0.706815 | tig0020882:+69269 | None:intergenic |
CTGGCTGAAGATGATGTAAG+GGG | 0.707956 | tig0020882:-68386 | Msa1387160:CDS |
GAAGTCGTCGTTACCAACTG+CGG | 0.713163 | tig0020882:-68525 | Msa1387160:CDS |
TGTTTCGGTGAATTTGAGCG+TGG | 0.715877 | tig0020882:+68715 | None:intergenic |
ATATCCGCTACGCCGCAACG+TGG | 0.719735 | tig0020882:+68965 | None:intergenic |
GGTACAACTACCATGAACGC+CGG | 0.720442 | tig0020882:-68935 | Msa1387160:CDS |
GGTGGATTTAGAATCAGTGG+CGG | 0.737330 | tig0020882:-68504 | Msa1387160:CDS |
CATCAAGGCGAAAACTACAA+CGG | 0.737671 | tig0020882:-69166 | Msa1387160:CDS |
TCTTTCCCGGTCAACCACGG+TGG | 0.752845 | tig0020882:-68844 | Msa1387160:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AGTAGTTCTTTAAATTAGAG+AGG | + | tig0020882:68402-68421 | None:intergenic | 25.0% |
! | AATTTCAATCTCAATGTAAC+CGG | - | tig0020882:68517-68536 | Msa1387160:CDS | 25.0% |
! | ATTAAGATTGGATTCTTCAA+CGG | - | tig0020882:68871-68890 | Msa1387160:CDS | 25.0% |
! | AGGGGAATTCAATATTTATA+TGG | - | tig0020882:69174-69193 | Msa1387160:CDS | 25.0% |
! | AGTAGTTCTTTAAATTAGAG+AGG | + | tig0020882:68402-68421 | None:intergenic | 25.0% |
! | AATTTCAATCTCAATGTAAC+CGG | - | tig0020882:68517-68536 | Msa1387160:CDS | 25.0% |
! | ATTAAGATTGGATTCTTCAA+CGG | - | tig0020882:68871-68890 | Msa1387160:CDS | 25.0% |
! | AGGGGAATTCAATATTTATA+TGG | - | tig0020882:69174-69193 | Msa1387160:CDS | 25.0% |
GAGAGAATGAAAATGTGAAA+GGG | + | tig0020882:68246-68265 | None:intergenic | 30.0% | |
AGAGAGAATGAAAATGTGAA+AGG | + | tig0020882:68247-68266 | None:intergenic | 30.0% | |
CATTGAGATTGAAATTCTTC+TGG | + | tig0020882:68513-68532 | None:intergenic | 30.0% | |
GAGAGAATGAAAATGTGAAA+GGG | + | tig0020882:68246-68265 | None:intergenic | 30.0% | |
AGAGAGAATGAAAATGTGAA+AGG | + | tig0020882:68247-68266 | None:intergenic | 30.0% | |
CATTGAGATTGAAATTCTTC+TGG | + | tig0020882:68513-68532 | None:intergenic | 30.0% | |
AGAATGAAAATGTGAAAGGG+AGG | + | tig0020882:68243-68262 | None:intergenic | 35.0% | |
AAGAACTACTTCCAACACTT+CGG | - | tig0020882:68412-68431 | Msa1387160:CDS | 35.0% | |
TCATCGGAGAAATTTGATTC+CGG | + | tig0020882:68454-68473 | None:intergenic | 35.0% | |
!!! | GGTAGGTTTTAATTGCTTCT+TGG | + | tig0020882:68492-68511 | None:intergenic | 35.0% |
GAGATTGAAATTCTTCTGGT+AGG | + | tig0020882:68509-68528 | None:intergenic | 35.0% | |
CTGTGAAATGTGATACTGTA+TGG | + | tig0020882:68678-68697 | None:intergenic | 35.0% | |
TTTCTGTAAGTTCGTTACCA+GGG | + | tig0020882:68759-68778 | None:intergenic | 35.0% | |
ACCGAAACAACGTTATATTC+AGG | - | tig0020882:68841-68860 | Msa1387160:CDS | 35.0% | |
GCCTGAATATAACGTTGTTT+CGG | + | tig0020882:68845-68864 | None:intergenic | 35.0% | |
! | ATTGGGCATTTGTTAGGATT+AGG | - | tig0020882:69069-69088 | Msa1387160:CDS | 35.0% |
AGAATGAAAATGTGAAAGGG+AGG | + | tig0020882:68243-68262 | None:intergenic | 35.0% | |
AAGAACTACTTCCAACACTT+CGG | - | tig0020882:68412-68431 | Msa1387160:CDS | 35.0% | |
TCATCGGAGAAATTTGATTC+CGG | + | tig0020882:68454-68473 | None:intergenic | 35.0% | |
!!! | GGTAGGTTTTAATTGCTTCT+TGG | + | tig0020882:68492-68511 | None:intergenic | 35.0% |
GAGATTGAAATTCTTCTGGT+AGG | + | tig0020882:68509-68528 | None:intergenic | 35.0% | |
CTGTGAAATGTGATACTGTA+TGG | + | tig0020882:68678-68697 | None:intergenic | 35.0% | |
TTTCTGTAAGTTCGTTACCA+GGG | + | tig0020882:68759-68778 | None:intergenic | 35.0% | |
ACCGAAACAACGTTATATTC+AGG | - | tig0020882:68841-68860 | Msa1387160:CDS | 35.0% | |
GCCTGAATATAACGTTGTTT+CGG | + | tig0020882:68845-68864 | None:intergenic | 35.0% | |
! | ATTGGGCATTTGTTAGGATT+AGG | - | tig0020882:69069-69088 | Msa1387160:CDS | 35.0% |
ATAGACGAGCAGAAACAATG+AGG | + | tig0020882:68276-68295 | None:intergenic | 40.0% | |
CATCAAGGCGAAAACTACAA+CGG | - | tig0020882:68376-68395 | Msa1387160:CDS | 40.0% | |
TCACATTTCACAGTCTTTCC+CGG | - | tig0020882:68685-68704 | Msa1387160:CDS | 40.0% | |
GTTTCTGTAAGTTCGTTACC+AGG | + | tig0020882:68760-68779 | None:intergenic | 40.0% | |
!! | TCAGGCGCTGATATTAAGAT+TGG | - | tig0020882:68859-68878 | Msa1387160:CDS | 40.0% |
CATGAGATTGGGCATTTGTT+AGG | - | tig0020882:69063-69082 | Msa1387160:CDS | 40.0% | |
GGTACTAACCCTAGTTTCAA+TGG | - | tig0020882:69195-69214 | Msa1387160:CDS | 40.0% | |
AACAGAGAGAAAAGTCTCCA+CGG | + | tig0020882:69294-69313 | None:intergenic | 40.0% | |
ATAGACGAGCAGAAACAATG+AGG | + | tig0020882:68276-68295 | None:intergenic | 40.0% | |
CATCAAGGCGAAAACTACAA+CGG | - | tig0020882:68376-68395 | Msa1387160:CDS | 40.0% | |
TCACATTTCACAGTCTTTCC+CGG | - | tig0020882:68685-68704 | Msa1387160:CDS | 40.0% | |
GTTTCTGTAAGTTCGTTACC+AGG | + | tig0020882:68760-68779 | None:intergenic | 40.0% | |
!! | TCAGGCGCTGATATTAAGAT+TGG | - | tig0020882:68859-68878 | Msa1387160:CDS | 40.0% |
CATGAGATTGGGCATTTGTT+AGG | - | tig0020882:69063-69082 | Msa1387160:CDS | 40.0% | |
GGTACTAACCCTAGTTTCAA+TGG | - | tig0020882:69195-69214 | Msa1387160:CDS | 40.0% | |
AACAGAGAGAAAAGTCTCCA+CGG | + | tig0020882:69294-69313 | None:intergenic | 40.0% | |
!! | AAATTGCGAAAGGCATCCCA+CGG | + | tig0020882:68346-68365 | None:intergenic | 45.0% |
GATGCCTTTCGCAATTTCAC+CGG | - | tig0020882:68349-68368 | Msa1387160:CDS | 45.0% | |
! | CGTTGTAGTTTTCGCCTTGA+TGG | + | tig0020882:68378-68397 | None:intergenic | 45.0% |
AGAAATTTGATTCCGGCGAG+CGG | + | tig0020882:68447-68466 | None:intergenic | 45.0% | |
GAGATCATCGTCGAAGTCAT+CGG | + | tig0020882:68470-68489 | None:intergenic | 45.0% | |
!! | GGCGTAGCGGATATCATTAA+CGG | - | tig0020882:68586-68605 | Msa1387160:CDS | 45.0% |
! | TGTTGCGAAGACGCTTTTCA+CGG | + | tig0020882:68782-68801 | None:intergenic | 45.0% |
TGTTTCGGTGAATTTGAGCG+TGG | + | tig0020882:68830-68849 | None:intergenic | 45.0% | |
GTTCCTAAGCTTCCGTCAAA+CGG | + | tig0020882:68916-68935 | None:intergenic | 45.0% | |
CATGCTTTCTCTCCAAGGAA+CGG | - | tig0020882:68943-68962 | Msa1387160:CDS | 45.0% | |
ATGCTTTCTCTCCAAGGAAC+GGG | - | tig0020882:68944-68963 | Msa1387160:CDS | 45.0% | |
GATTCTAAATCCACCGCAGT+TGG | + | tig0020882:69033-69052 | None:intergenic | 45.0% | |
! | TGCGGTGGATTTAGAATCAG+TGG | - | tig0020882:69035-69054 | Msa1387160:CDS | 45.0% |
! | GGTGGATTTAGAATCAGTGG+CGG | - | tig0020882:69038-69057 | Msa1387160:CDS | 45.0% |
GTTAGGATTAGGTCACTCGT+CGG | - | tig0020882:69080-69099 | Msa1387160:CDS | 45.0% | |
TGTTTCCGACGATATCGTCA+CGG | - | tig0020882:69118-69137 | Msa1387160:CDS | 45.0% | |
TTCATCCGTGACGATATCGT+CGG | + | tig0020882:69126-69145 | None:intergenic | 45.0% | |
ACGGATGAAGAAAGTAGTGC+TGG | - | tig0020882:69137-69156 | Msa1387160:CDS | 45.0% | |
! | TGCTGGCTGAAGATGATGTA+AGG | - | tig0020882:69154-69173 | Msa1387160:CDS | 45.0% |
GCTGGCTGAAGATGATGTAA+GGG | - | tig0020882:69155-69174 | Msa1387160:CDS | 45.0% | |
CTGGCTGAAGATGATGTAAG+GGG | - | tig0020882:69156-69175 | Msa1387160:CDS | 45.0% | |
TGGTGGAGCCATTGAAACTA+GGG | + | tig0020882:69206-69225 | None:intergenic | 45.0% | |
! | ATGGTGGAGCCATTGAAACT+AGG | + | tig0020882:69207-69226 | None:intergenic | 45.0% |
ACAGCCTCACTTCTTCTTTG+TGG | - | tig0020882:69265-69284 | Msa1387160:CDS | 45.0% | |
GGAACCACAAAGAAGAAGTG+AGG | + | tig0020882:69272-69291 | None:intergenic | 45.0% | |
ACAGAGAGAAAAGTCTCCAC+GGG | + | tig0020882:69293-69312 | None:intergenic | 45.0% | |
!! | AAATTGCGAAAGGCATCCCA+CGG | + | tig0020882:68346-68365 | None:intergenic | 45.0% |
GATGCCTTTCGCAATTTCAC+CGG | - | tig0020882:68349-68368 | Msa1387160:CDS | 45.0% | |
! | CGTTGTAGTTTTCGCCTTGA+TGG | + | tig0020882:68378-68397 | None:intergenic | 45.0% |
AGAAATTTGATTCCGGCGAG+CGG | + | tig0020882:68447-68466 | None:intergenic | 45.0% | |
GAGATCATCGTCGAAGTCAT+CGG | + | tig0020882:68470-68489 | None:intergenic | 45.0% | |
!! | GGCGTAGCGGATATCATTAA+CGG | - | tig0020882:68586-68605 | Msa1387160:CDS | 45.0% |
! | TGTTGCGAAGACGCTTTTCA+CGG | + | tig0020882:68782-68801 | None:intergenic | 45.0% |
TGTTTCGGTGAATTTGAGCG+TGG | + | tig0020882:68830-68849 | None:intergenic | 45.0% | |
GTTCCTAAGCTTCCGTCAAA+CGG | + | tig0020882:68916-68935 | None:intergenic | 45.0% | |
CATGCTTTCTCTCCAAGGAA+CGG | - | tig0020882:68943-68962 | Msa1387160:CDS | 45.0% | |
ATGCTTTCTCTCCAAGGAAC+GGG | - | tig0020882:68944-68963 | Msa1387160:CDS | 45.0% | |
GATTCTAAATCCACCGCAGT+TGG | + | tig0020882:69033-69052 | None:intergenic | 45.0% | |
! | TGCGGTGGATTTAGAATCAG+TGG | - | tig0020882:69035-69054 | Msa1387160:CDS | 45.0% |
! | GGTGGATTTAGAATCAGTGG+CGG | - | tig0020882:69038-69057 | Msa1387160:CDS | 45.0% |
GTTAGGATTAGGTCACTCGT+CGG | - | tig0020882:69080-69099 | Msa1387160:CDS | 45.0% | |
TGTTTCCGACGATATCGTCA+CGG | - | tig0020882:69118-69137 | Msa1387160:CDS | 45.0% | |
TTCATCCGTGACGATATCGT+CGG | + | tig0020882:69126-69145 | None:intergenic | 45.0% | |
ACGGATGAAGAAAGTAGTGC+TGG | - | tig0020882:69137-69156 | Msa1387160:CDS | 45.0% | |
! | TGCTGGCTGAAGATGATGTA+AGG | - | tig0020882:69154-69173 | Msa1387160:CDS | 45.0% |
GCTGGCTGAAGATGATGTAA+GGG | - | tig0020882:69155-69174 | Msa1387160:CDS | 45.0% | |
CTGGCTGAAGATGATGTAAG+GGG | - | tig0020882:69156-69175 | Msa1387160:CDS | 45.0% | |
TGGTGGAGCCATTGAAACTA+GGG | + | tig0020882:69206-69225 | None:intergenic | 45.0% | |
! | ATGGTGGAGCCATTGAAACT+AGG | + | tig0020882:69207-69226 | None:intergenic | 45.0% |
ACAGCCTCACTTCTTCTTTG+TGG | - | tig0020882:69265-69284 | Msa1387160:CDS | 45.0% | |
GGAACCACAAAGAAGAAGTG+AGG | + | tig0020882:69272-69291 | None:intergenic | 45.0% | |
ACAGAGAGAAAAGTCTCCAC+GGG | + | tig0020882:69293-69312 | None:intergenic | 45.0% | |
!! | AATTGCGAAAGGCATCCCAC+GGG | + | tig0020882:68345-68364 | None:intergenic | 50.0% |
! | AATTTCACCGGCTGCCATCA+AGG | - | tig0020882:68361-68380 | Msa1387160:CDS | 50.0% |
GGGGAATGTAACCGAAGTGT+TGG | + | tig0020882:68426-68445 | None:intergenic | 50.0% | |
AAATTTGATTCCGGCGAGCG+GGG | + | tig0020882:68445-68464 | None:intergenic | 50.0% | |
GAAATTTGATTCCGGCGAGC+GGG | + | tig0020882:68446-68465 | None:intergenic | 50.0% | |
GGTACAACTACCATGAACGC+CGG | - | tig0020882:68607-68626 | Msa1387160:CDS | 50.0% | |
!! | CGTTGTTTCTGTGTCCTTGC+CGG | + | tig0020882:68629-68648 | None:intergenic | 50.0% |
CAAACAGTGACAGCAAGCTG+CGG | - | tig0020882:68650-68669 | Msa1387160:CDS | 50.0% | |
TCTTCGCAACAGCGTTTGCA+CGG | - | tig0020882:68791-68810 | Msa1387160:CDS | 50.0% | |
GAAGTCGTCGTTACCAACTG+CGG | - | tig0020882:69017-69036 | Msa1387160:CDS | 50.0% | |
CTTCTTCTTTGTGGTTCCCG+TGG | - | tig0020882:69274-69293 | Msa1387160:CDS | 50.0% | |
!! | AATTGCGAAAGGCATCCCAC+GGG | + | tig0020882:68345-68364 | None:intergenic | 50.0% |
! | AATTTCACCGGCTGCCATCA+AGG | - | tig0020882:68361-68380 | Msa1387160:CDS | 50.0% |
GGGGAATGTAACCGAAGTGT+TGG | + | tig0020882:68426-68445 | None:intergenic | 50.0% | |
AAATTTGATTCCGGCGAGCG+GGG | + | tig0020882:68445-68464 | None:intergenic | 50.0% | |
GAAATTTGATTCCGGCGAGC+GGG | + | tig0020882:68446-68465 | None:intergenic | 50.0% | |
GGTACAACTACCATGAACGC+CGG | - | tig0020882:68607-68626 | Msa1387160:CDS | 50.0% | |
!! | CGTTGTTTCTGTGTCCTTGC+CGG | + | tig0020882:68629-68648 | None:intergenic | 50.0% |
CAAACAGTGACAGCAAGCTG+CGG | - | tig0020882:68650-68669 | Msa1387160:CDS | 50.0% | |
TCTTCGCAACAGCGTTTGCA+CGG | - | tig0020882:68791-68810 | Msa1387160:CDS | 50.0% | |
GAAGTCGTCGTTACCAACTG+CGG | - | tig0020882:69017-69036 | Msa1387160:CDS | 50.0% | |
CTTCTTCTTTGTGGTTCCCG+TGG | - | tig0020882:69274-69293 | Msa1387160:CDS | 50.0% | |
TATTTCCCGACGTCCCCTCT+TGG | - | tig0020882:68293-68312 | Msa1387160:CDS | 55.0% | |
AGGTATCCAAGAGGGGACGT+CGG | + | tig0020882:68302-68321 | None:intergenic | 55.0% | |
GCAGCCGGTGAAATTGCGAA+AGG | + | tig0020882:68356-68375 | None:intergenic | 55.0% | |
!! | GTTTTCGCCTTGATGGCAGC+CGG | + | tig0020882:68371-68390 | None:intergenic | 55.0% |
AGTCATGTCGTCGAGCTCAC+CGG | + | tig0020882:68539-68558 | None:intergenic | 55.0% | |
AGCTCGACGACATGACTCTC+CGG | - | tig0020882:68542-68561 | Msa1387160:CDS | 55.0% | |
AACGTGGTAGCATGACCTGC+CGG | + | tig0020882:68564-68583 | None:intergenic | 55.0% | |
CAGGTCATGCTACCACGTTG+CGG | - | tig0020882:68565-68584 | Msa1387160:CDS | 55.0% | |
AACTACCATGAACGCCGGCA+AGG | - | tig0020882:68612-68631 | Msa1387160:CDS | 55.0% | |
CAGTCTTTCCCGGTCAACCA+CGG | - | tig0020882:68695-68714 | Msa1387160:CDS | 55.0% | |
GTTAGCTCCTGCTTTCCCTC+CGG | + | tig0020882:68724-68743 | None:intergenic | 55.0% | |
CTAACCTACGCGTTCTTCCC+TGG | - | tig0020882:68739-68758 | Msa1387160:CDS | 55.0% | |
GTTACCAGGGAAGAACGCGT+AGG | + | tig0020882:68746-68765 | None:intergenic | 55.0% | |
AACAGCGTTTGCACGGTGGT+CGG | - | tig0020882:68798-68817 | Msa1387160:CDS | 55.0% | |
GGATTCTTCAACGGCGACCA+TGG | - | tig0020882:68880-68899 | Msa1387160:CDS | 55.0% | |
TTCAACGGCGACCATGGAGA+TGG | - | tig0020882:68886-68905 | Msa1387160:CDS | 55.0% | |
GAGCCGTTTGACGGAAGCTT+AGG | - | tig0020882:68910-68929 | Msa1387160:CDS | 55.0% | |
TGACGGAAGCTTAGGAACGC+TGG | - | tig0020882:68918-68937 | Msa1387160:CDS | 55.0% | |
TGGCGCATGCTTTCTCTCCA+AGG | - | tig0020882:68938-68957 | Msa1387160:CDS | 55.0% | |
CTTTCTCTCCAAGGAACGGG+AGG | - | tig0020882:68947-68966 | Msa1387160:CDS | 55.0% | |
AGGTGAAACCTCCCGTTCCT+TGG | + | tig0020882:68958-68977 | None:intergenic | 55.0% | |
GTTTCACCTTGACGCTGCAG+AGG | - | tig0020882:68969-68988 | Msa1387160:CDS | 55.0% | |
GCAGAGGACTGGGTAGTTTC+CGG | - | tig0020882:68985-69004 | Msa1387160:CDS | 55.0% | |
TCAGTGGCGGTGCATGAGAT+TGG | - | tig0020882:69051-69070 | Msa1387160:CDS | 55.0% | |
CAGTGGCGGTGCATGAGATT+GGG | - | tig0020882:69052-69071 | Msa1387160:CDS | 55.0% | |
AGGATTAGGTCACTCGTCGG+TGG | - | tig0020882:69083-69102 | Msa1387160:CDS | 55.0% | |
ATTAGGTCACTCGTCGGTGG+AGG | - | tig0020882:69086-69105 | Msa1387160:CDS | 55.0% | |
TCGTCACCGGAGAGGAATAC+CGG | - | tig0020882:69231-69250 | Msa1387160:CDS | 55.0% | |
TATTTCCCGACGTCCCCTCT+TGG | - | tig0020882:68293-68312 | Msa1387160:CDS | 55.0% | |
AGGTATCCAAGAGGGGACGT+CGG | + | tig0020882:68302-68321 | None:intergenic | 55.0% | |
GCAGCCGGTGAAATTGCGAA+AGG | + | tig0020882:68356-68375 | None:intergenic | 55.0% | |
!! | GTTTTCGCCTTGATGGCAGC+CGG | + | tig0020882:68371-68390 | None:intergenic | 55.0% |
AGTCATGTCGTCGAGCTCAC+CGG | + | tig0020882:68539-68558 | None:intergenic | 55.0% | |
AGCTCGACGACATGACTCTC+CGG | - | tig0020882:68542-68561 | Msa1387160:CDS | 55.0% | |
AACGTGGTAGCATGACCTGC+CGG | + | tig0020882:68564-68583 | None:intergenic | 55.0% | |
CAGGTCATGCTACCACGTTG+CGG | - | tig0020882:68565-68584 | Msa1387160:CDS | 55.0% | |
AACTACCATGAACGCCGGCA+AGG | - | tig0020882:68612-68631 | Msa1387160:CDS | 55.0% | |
CAGTCTTTCCCGGTCAACCA+CGG | - | tig0020882:68695-68714 | Msa1387160:CDS | 55.0% | |
GTTAGCTCCTGCTTTCCCTC+CGG | + | tig0020882:68724-68743 | None:intergenic | 55.0% | |
CTAACCTACGCGTTCTTCCC+TGG | - | tig0020882:68739-68758 | Msa1387160:CDS | 55.0% | |
GTTACCAGGGAAGAACGCGT+AGG | + | tig0020882:68746-68765 | None:intergenic | 55.0% | |
AACAGCGTTTGCACGGTGGT+CGG | - | tig0020882:68798-68817 | Msa1387160:CDS | 55.0% | |
GGATTCTTCAACGGCGACCA+TGG | - | tig0020882:68880-68899 | Msa1387160:CDS | 55.0% | |
TTCAACGGCGACCATGGAGA+TGG | - | tig0020882:68886-68905 | Msa1387160:CDS | 55.0% | |
GAGCCGTTTGACGGAAGCTT+AGG | - | tig0020882:68910-68929 | Msa1387160:CDS | 55.0% | |
TGACGGAAGCTTAGGAACGC+TGG | - | tig0020882:68918-68937 | Msa1387160:CDS | 55.0% | |
TGGCGCATGCTTTCTCTCCA+AGG | - | tig0020882:68938-68957 | Msa1387160:CDS | 55.0% | |
CTTTCTCTCCAAGGAACGGG+AGG | - | tig0020882:68947-68966 | Msa1387160:CDS | 55.0% | |
AGGTGAAACCTCCCGTTCCT+TGG | + | tig0020882:68958-68977 | None:intergenic | 55.0% | |
GTTTCACCTTGACGCTGCAG+AGG | - | tig0020882:68969-68988 | Msa1387160:CDS | 55.0% | |
GCAGAGGACTGGGTAGTTTC+CGG | - | tig0020882:68985-69004 | Msa1387160:CDS | 55.0% | |
TCAGTGGCGGTGCATGAGAT+TGG | - | tig0020882:69051-69070 | Msa1387160:CDS | 55.0% | |
CAGTGGCGGTGCATGAGATT+GGG | - | tig0020882:69052-69071 | Msa1387160:CDS | 55.0% | |
AGGATTAGGTCACTCGTCGG+TGG | - | tig0020882:69083-69102 | Msa1387160:CDS | 55.0% | |
ATTAGGTCACTCGTCGGTGG+AGG | - | tig0020882:69086-69105 | Msa1387160:CDS | 55.0% | |
TCGTCACCGGAGAGGAATAC+CGG | - | tig0020882:69231-69250 | Msa1387160:CDS | 55.0% | |
GGTATCCAAGAGGGGACGTC+GGG | + | tig0020882:68301-68320 | None:intergenic | 60.0% | |
GTCCCCTCTTGGATACCTCC+CGG | - | tig0020882:68304-68323 | Msa1387160:CDS | 60.0% | |
!! | TGCCGGGAGGTATCCAAGAG+GGG | + | tig0020882:68309-68328 | None:intergenic | 60.0% |
!! | GTGCCGGGAGGTATCCAAGA+GGG | + | tig0020882:68310-68329 | None:intergenic | 60.0% |
!! | AGTGCCGGGAGGTATCCAAG+AGG | + | tig0020882:68311-68330 | None:intergenic | 60.0% |
ATATCCGCTACGCCGCAACG+TGG | + | tig0020882:68580-68599 | None:intergenic | 60.0% | |
TGTGTCCTTGCCGGCGTTCA+TGG | + | tig0020882:68620-68639 | None:intergenic | 60.0% | |
TCTTTCCCGGTCAACCACGG+TGG | - | tig0020882:68698-68717 | Msa1387160:CDS | 60.0% | |
TCGCAACAGCGTTTGCACGG+TGG | - | tig0020882:68794-68813 | Msa1387160:CDS | 60.0% | |
CAAACGGCTCGCCATCTCCA+TGG | + | tig0020882:68900-68919 | None:intergenic | 60.0% | |
GGAGATGGCGAGCCGTTTGA+CGG | - | tig0020882:68901-68920 | Msa1387160:CDS | 60.0% | |
ACCTTGACGCTGCAGAGGAC+TGG | - | tig0020882:68974-68993 | Msa1387160:CDS | 60.0% | |
CCTTGACGCTGCAGAGGACT+GGG | - | tig0020882:68975-68994 | Msa1387160:CDS | 60.0% | |
CGACGACTTCGACACATCGC+CGG | + | tig0020882:69007-69026 | None:intergenic | 60.0% | |
GTCGTCGTTACCAACTGCGG+TGG | - | tig0020882:69020-69039 | Msa1387160:CDS | 60.0% | |
CTCCACCATCACGTCGTCAC+CGG | - | tig0020882:69218-69237 | Msa1387160:CDS | 60.0% | |
CCGTTGCCGGTATTCCTCTC+CGG | + | tig0020882:69240-69259 | None:intergenic | 60.0% | |
CCGGAGAGGAATACCGGCAA+CGG | - | tig0020882:69237-69256 | Msa1387160:CDS | 60.0% | |
GAGAGGAATACCGGCAACGG+TGG | - | tig0020882:69240-69259 | Msa1387160:CDS | 60.0% | |
GAGGCTGTAACCACCGTTGC+CGG | + | tig0020882:69253-69272 | None:intergenic | 60.0% | |
GGTATCCAAGAGGGGACGTC+GGG | + | tig0020882:68301-68320 | None:intergenic | 60.0% | |
GTCCCCTCTTGGATACCTCC+CGG | - | tig0020882:68304-68323 | Msa1387160:CDS | 60.0% | |
!! | TGCCGGGAGGTATCCAAGAG+GGG | + | tig0020882:68309-68328 | None:intergenic | 60.0% |
!! | GTGCCGGGAGGTATCCAAGA+GGG | + | tig0020882:68310-68329 | None:intergenic | 60.0% |
!! | AGTGCCGGGAGGTATCCAAG+AGG | + | tig0020882:68311-68330 | None:intergenic | 60.0% |
ATATCCGCTACGCCGCAACG+TGG | + | tig0020882:68580-68599 | None:intergenic | 60.0% | |
TGTGTCCTTGCCGGCGTTCA+TGG | + | tig0020882:68620-68639 | None:intergenic | 60.0% | |
TCTTTCCCGGTCAACCACGG+TGG | - | tig0020882:68698-68717 | Msa1387160:CDS | 60.0% | |
TCGCAACAGCGTTTGCACGG+TGG | - | tig0020882:68794-68813 | Msa1387160:CDS | 60.0% | |
CAAACGGCTCGCCATCTCCA+TGG | + | tig0020882:68900-68919 | None:intergenic | 60.0% | |
GGAGATGGCGAGCCGTTTGA+CGG | - | tig0020882:68901-68920 | Msa1387160:CDS | 60.0% | |
ACCTTGACGCTGCAGAGGAC+TGG | - | tig0020882:68974-68993 | Msa1387160:CDS | 60.0% | |
CCTTGACGCTGCAGAGGACT+GGG | - | tig0020882:68975-68994 | Msa1387160:CDS | 60.0% | |
CGACGACTTCGACACATCGC+CGG | + | tig0020882:69007-69026 | None:intergenic | 60.0% | |
GTCGTCGTTACCAACTGCGG+TGG | - | tig0020882:69020-69039 | Msa1387160:CDS | 60.0% | |
CTCCACCATCACGTCGTCAC+CGG | - | tig0020882:69218-69237 | Msa1387160:CDS | 60.0% | |
CCGTTGCCGGTATTCCTCTC+CGG | + | tig0020882:69240-69259 | None:intergenic | 60.0% | |
CCGGAGAGGAATACCGGCAA+CGG | - | tig0020882:69237-69256 | Msa1387160:CDS | 60.0% | |
GAGAGGAATACCGGCAACGG+TGG | - | tig0020882:69240-69259 | Msa1387160:CDS | 60.0% | |
GAGGCTGTAACCACCGTTGC+CGG | + | tig0020882:69253-69272 | None:intergenic | 60.0% | |
CGGTTACATTCCCCGCTCGC+CGG | - | tig0020882:68432-68451 | Msa1387160:CDS | 65.0% | |
CGACGACATGACTCTCCGGC+AGG | - | tig0020882:68546-68565 | Msa1387160:CDS | 65.0% | |
GCTACCACGTTGCGGCGTAG+CGG | - | tig0020882:68573-68592 | Msa1387160:CDS | 65.0% | |
AGCGTTTGCACGGTGGTCGG+AGG | - | tig0020882:68801-68820 | Msa1387160:CDS | 65.0% | |
CCCAGTCCTCTGCAGCGTCA+AGG | + | tig0020882:68978-68997 | None:intergenic | 65.0% | |
CTCCGGTGACGACGTGATGG+TGG | + | tig0020882:69223-69242 | None:intergenic | 65.0% | |
CCTCTCCGGTGACGACGTGA+TGG | + | tig0020882:69226-69245 | None:intergenic | 65.0% | |
CCATCACGTCGTCACCGGAG+AGG | - | tig0020882:69223-69242 | Msa1387160:CDS | 65.0% | |
CGGTTACATTCCCCGCTCGC+CGG | - | tig0020882:68432-68451 | Msa1387160:CDS | 65.0% | |
CGACGACATGACTCTCCGGC+AGG | - | tig0020882:68546-68565 | Msa1387160:CDS | 65.0% | |
GCTACCACGTTGCGGCGTAG+CGG | - | tig0020882:68573-68592 | Msa1387160:CDS | 65.0% | |
AGCGTTTGCACGGTGGTCGG+AGG | - | tig0020882:68801-68820 | Msa1387160:CDS | 65.0% | |
CCCAGTCCTCTGCAGCGTCA+AGG | + | tig0020882:68978-68997 | None:intergenic | 65.0% | |
CTCCGGTGACGACGTGATGG+TGG | + | tig0020882:69223-69242 | None:intergenic | 65.0% | |
CCTCTCCGGTGACGACGTGA+TGG | + | tig0020882:69226-69245 | None:intergenic | 65.0% | |
CCATCACGTCGTCACCGGAG+AGG | - | tig0020882:69223-69242 | Msa1387160:CDS | 65.0% | |
GGATACCTCCCGGCACTCCC+CGG | - | tig0020882:68314-68333 | Msa1387160:CDS | 70.0% | |
GATACCTCCCGGCACTCCCC+GGG | - | tig0020882:68315-68334 | Msa1387160:CDS | 70.0% | |
TCCCGGTCAACCACGGTGGC+CGG | - | tig0020882:68702-68721 | Msa1387160:CDS | 70.0% | |
TCCGGCCACCGTGGTTGACC+GGG | + | tig0020882:68706-68725 | None:intergenic | 70.0% | |
CTCCGGCCACCGTGGTTGAC+CGG | + | tig0020882:68707-68726 | None:intergenic | 70.0% | |
GGTCAACCACGGTGGCCGGA+GGG | - | tig0020882:68706-68725 | Msa1387160:CDS | 70.0% | |
TGCTTTCCCTCCGGCCACCG+TGG | + | tig0020882:68715-68734 | None:intergenic | 70.0% | |
ACGGTGGCCGGAGGGAAAGC+AGG | - | tig0020882:68714-68733 | Msa1387160:CDS | 70.0% | |
GGATACCTCCCGGCACTCCC+CGG | - | tig0020882:68314-68333 | Msa1387160:CDS | 70.0% | |
GATACCTCCCGGCACTCCCC+GGG | - | tig0020882:68315-68334 | Msa1387160:CDS | 70.0% | |
TCCCGGTCAACCACGGTGGC+CGG | - | tig0020882:68702-68721 | Msa1387160:CDS | 70.0% | |
TCCGGCCACCGTGGTTGACC+GGG | + | tig0020882:68706-68725 | None:intergenic | 70.0% | |
CTCCGGCCACCGTGGTTGAC+CGG | + | tig0020882:68707-68726 | None:intergenic | 70.0% | |
GGTCAACCACGGTGGCCGGA+GGG | - | tig0020882:68706-68725 | Msa1387160:CDS | 70.0% | |
TGCTTTCCCTCCGGCCACCG+TGG | + | tig0020882:68715-68734 | None:intergenic | 70.0% | |
ACGGTGGCCGGAGGGAAAGC+AGG | - | tig0020882:68714-68733 | Msa1387160:CDS | 70.0% | |
AGGCATCCCACGGGCCGACC+CGG | + | tig0020882:68336-68355 | None:intergenic | 75.0% | |
CGGTCAACCACGGTGGCCGG+AGG | - | tig0020882:68705-68724 | Msa1387160:CDS | 75.0% | |
AGGCATCCCACGGGCCGACC+CGG | + | tig0020882:68336-68355 | None:intergenic | 75.0% | |
CGGTCAACCACGGTGGCCGG+AGG | - | tig0020882:68705-68724 | Msa1387160:CDS | 75.0% | |
! | CCTCCCGGCACTCCCCGGGT+CGG | - | tig0020882:68319-68338 | Msa1387160:CDS | 80.0% |
! | CACTCCCCGGGTCGGCCCGT+GGG | - | tig0020882:68327-68346 | Msa1387160:CDS | 80.0% |
! | GCATCCCACGGGCCGACCCG+GGG | + | tig0020882:68334-68353 | None:intergenic | 80.0% |
! | GGCATCCCACGGGCCGACCC+GGG | + | tig0020882:68335-68354 | None:intergenic | 80.0% |
! | CCTCCCGGCACTCCCCGGGT+CGG | - | tig0020882:68319-68338 | Msa1387160:CDS | 80.0% |
! | CACTCCCCGGGTCGGCCCGT+GGG | - | tig0020882:68327-68346 | Msa1387160:CDS | 80.0% |
! | GCATCCCACGGGCCGACCCG+GGG | + | tig0020882:68334-68353 | None:intergenic | 80.0% |
! | GGCATCCCACGGGCCGACCC+GGG | + | tig0020882:68335-68354 | None:intergenic | 80.0% |
!!! | CCGACCCGGGGAGTGCCGGG+AGG | + | tig0020882:68322-68341 | None:intergenic | 85.0% |
!!! | GGGCCGACCCGGGGAGTGCC+GGG | + | tig0020882:68325-68344 | None:intergenic | 85.0% |
!! | CGGGCCGACCCGGGGAGTGC+CGG | + | tig0020882:68326-68345 | None:intergenic | 85.0% |
! | GCACTCCCCGGGTCGGCCCG+TGG | - | tig0020882:68326-68345 | Msa1387160:CDS | 85.0% |
!!! | CCGACCCGGGGAGTGCCGGG+AGG | + | tig0020882:68322-68341 | None:intergenic | 85.0% |
!!! | GGGCCGACCCGGGGAGTGCC+GGG | + | tig0020882:68325-68344 | None:intergenic | 85.0% |
!! | CGGGCCGACCCGGGGAGTGC+CGG | + | tig0020882:68326-68345 | None:intergenic | 85.0% |
! | GCACTCCCCGGGTCGGCCCG+TGG | - | tig0020882:68326-68345 | Msa1387160:CDS | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0020882 | gene | 68220 | 69344 | 68220 | ID=Msa1387160;Name=Msa1387160 |
tig0020882 | mRNA | 68220 | 69344 | 68220 | ID=Msa1387160-mRNA-1;Parent=Msa1387160;Name=Msa1387160-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|374 |
tig0020882 | exon | 68220 | 69344 | 68220 | ID=Msa1387160-mRNA-1:exon:10494;Parent=Msa1387160-mRNA-1 |
tig0020882 | CDS | 68220 | 69344 | 68220 | ID=Msa1387160-mRNA-1:cds;Parent=Msa1387160-mRNA-1 |
Gene Sequence |
Protein sequence |