Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397910 | XP_003628627.3 | 95.722 | 374 | 15 | 1 | 1 | 374 | 1 | 373 | 0.0 | 715 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397910 | sp|O04529|2MMP_ARATH | 58.721 | 344 | 129 | 7 | 12 | 345 | 6 | 346 | 6.41e-135 | 393 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397910 | G7LEQ8 | 95.722 | 374 | 15 | 1 | 1 | 374 | 1 | 373 | 0.0 | 715 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1387160 | Msa1397910 | 0.995842 | 1.718376e-220 | -8.615850e-47 |
| Msa0745160 | Msa1397910 | 0.802218 | 6.225700e-49 | -8.615850e-47 |
| Msa0817190 | Msa1397910 | 0.808860 | 2.516397e-50 | -8.615850e-47 |
| Msa0865430 | Msa1397910 | 0.800342 | 1.507267e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397910 | MtrunA17_Chr8g0364281 | 95.722 | 374 | 15 | 1 | 1 | 374 | 38 | 410 | 0.0 | 713 |
| Msa1397910 | MtrunA17_Chr5g0414891 | 64.392 | 337 | 110 | 3 | 15 | 348 | 19 | 348 | 5.74e-161 | 456 |
| Msa1397910 | MtrunA17_Chr5g0399301 | 47.368 | 323 | 143 | 5 | 23 | 339 | 25 | 326 | 3.28e-96 | 290 |
| Msa1397910 | MtrunA17_Chr8g0334661 | 45.902 | 305 | 143 | 7 | 48 | 345 | 39 | 328 | 1.17e-82 | 256 |
| Msa1397910 | MtrunA17_Chr5g0414641 | 39.623 | 318 | 154 | 9 | 19 | 328 | 34 | 321 | 7.19e-61 | 199 |
| Msa1397910 | MtrunA17_Chr6g0451671 | 35.179 | 307 | 156 | 7 | 45 | 325 | 40 | 329 | 5.15e-54 | 181 |
| Msa1397910 | MtrunA17_Chr5g0414654 | 37.107 | 318 | 145 | 8 | 10 | 325 | 9 | 273 | 1.09e-49 | 169 |
| Msa1397910 | MtrunA17_Chr5g0414657 | 36.036 | 333 | 167 | 9 | 10 | 325 | 9 | 312 | 1.36e-48 | 167 |
| Msa1397910 | MtrunA17_Chr5g0414661 | 35.862 | 290 | 140 | 9 | 62 | 335 | 35 | 294 | 1.65e-43 | 153 |
| Msa1397910 | MtrunA17_Chr5g0414791 | 36.426 | 291 | 142 | 10 | 58 | 339 | 87 | 343 | 1.60e-42 | 152 |
| Msa1397910 | MtrunA17_Chr5g0414821 | 34.915 | 295 | 147 | 12 | 54 | 339 | 108 | 366 | 1.95e-38 | 141 |
| Msa1397910 | MtrunA17_Chr5g0414771 | 35.943 | 281 | 148 | 9 | 59 | 332 | 4 | 259 | 1.42e-37 | 137 |
| Msa1397910 | MtrunA17_Chr5g0414831 | 42.500 | 120 | 66 | 3 | 188 | 304 | 1 | 120 | 1.67e-17 | 78.2 |
| Msa1397910 | MtrunA17_Chr5g0414801 | 43.421 | 76 | 40 | 2 | 53 | 127 | 66 | 139 | 6.31e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397910 | AT1G70170.1 | 58.721 | 344 | 129 | 7 | 12 | 345 | 6 | 346 | 6.52e-136 | 393 |
| Msa1397910 | AT1G24140.1 | 57.975 | 326 | 129 | 4 | 31 | 348 | 28 | 353 | 1.40e-131 | 382 |
| Msa1397910 | AT1G59970.1 | 52.547 | 373 | 143 | 11 | 16 | 374 | 6 | 358 | 5.66e-117 | 344 |
| Msa1397910 | AT4G16640.1 | 47.756 | 312 | 138 | 7 | 43 | 350 | 52 | 342 | 2.49e-86 | 266 |
| Msa1397910 | AT2G45040.1 | 48.805 | 293 | 120 | 7 | 61 | 347 | 50 | 318 | 1.10e-82 | 256 |
Find 125 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTCACATTTCTTATTAT+AGG | 0.190144 | tig0022216:-40950 | None:intergenic |
| TGTGTCCTTGCCGGCGTTCA+TGG | 0.279300 | tig0022216:+41656 | None:intergenic |
| AGGGGAATTCAATATTTATA+TGG | 0.304659 | tig0022216:-41099 | Msa1397910:CDS |
| CATGAGATTGGGCATTTGTT+AGG | 0.306029 | tig0022216:-41210 | Msa1397910:CDS |
| GGGCCGACCCGGGGAGTGCC+GGG | 0.329573 | tig0022216:+41951 | None:intergenic |
| CGTTGTTTCTGTGTCCTTGC+CGG | 0.339334 | tig0022216:+41647 | None:intergenic |
| CGGGCCGACCCGGGGAGTGC+CGG | 0.340426 | tig0022216:+41950 | None:intergenic |
| ACCTTGACGCTGCAGAGGAC+TGG | 0.343059 | tig0022216:-41299 | Msa1397910:CDS |
| CATTGAGATTGAAATTCTTC+TGG | 0.355467 | tig0022216:+41763 | None:intergenic |
| GCAGAGGACTGGGTAGTTTC+CGG | 0.362710 | tig0022216:-41288 | Msa1397910:CDS |
| ATTGGGCATTTGTTAGGATT+AGG | 0.367696 | tig0022216:-41204 | Msa1397910:CDS |
| TCAGGCGCTGATATTAAGAT+TGG | 0.370272 | tig0022216:-41414 | Msa1397910:CDS |
| AGGCATCCCACGGGCCGACC+CGG | 0.374549 | tig0022216:+41940 | None:intergenic |
| CTCCGGCCACCGTGGTTGAC+CGG | 0.386887 | tig0022216:+41569 | None:intergenic |
| ACAGCCTCACTTCTTCTTTG+TGG | 0.398951 | tig0022216:-41008 | Msa1397910:CDS |
| GAGGCTGTAACCACCGTTGC+CGG | 0.407385 | tig0022216:+41023 | None:intergenic |
| TCAGTGGCGGTGCATGAGAT+TGG | 0.416703 | tig0022216:-41222 | Msa1397910:CDS |
| GGCATCCCACGGGCCGACCC+GGG | 0.433619 | tig0022216:+41941 | None:intergenic |
| TCACATTTCACAGTCTTTCC+CGG | 0.434382 | tig0022216:-41588 | Msa1397910:CDS |
| GCCTGAATATAACGTTGTTT+CGG | 0.442318 | tig0022216:+41431 | None:intergenic |
| TCATCGGAGAAATTTGATTC+CGG | 0.445302 | tig0022216:+41822 | None:intergenic |
| GGTATCCAAGAGGGGACGTC+GGG | 0.448914 | tig0022216:+41975 | None:intergenic |
| TCCCGGTCAACCACGGTGGC+CGG | 0.450744 | tig0022216:-41571 | Msa1397910:CDS |
| ATGCTTTCTCTCCAAGGAAC+GGG | 0.452189 | tig0022216:-41329 | Msa1397910:CDS |
| AATTTCAATCTCAATGTAAC+CGG | 0.458242 | tig0022216:-41756 | Msa1397910:CDS |
| CAGTGGCGGTGCATGAGATT+GGG | 0.462850 | tig0022216:-41221 | Msa1397910:CDS |
| AGAGAGAATGAAAATGTGAA+AGG | 0.466519 | tig0022216:+42029 | None:intergenic |
| AATTTCACCGGCTGCCATCA+AGG | 0.468116 | tig0022216:-41912 | Msa1397910:CDS |
| GAGCCGTTTGACGGAAGCTT+AGG | 0.469950 | tig0022216:-41363 | Msa1397910:CDS |
| GAAATTTGATTCCGGCGAGC+GGG | 0.474085 | tig0022216:+41830 | None:intergenic |
| ACGGTGGCCGGAGGGAAAGC+AGG | 0.474686 | tig0022216:-41559 | Msa1397910:CDS |
| AGGTGAAACCTCCCGTTCCT+TGG | 0.476396 | tig0022216:+41318 | None:intergenic |
| ACCGAAACAACGTTATATTC+AGG | 0.482978 | tig0022216:-41432 | Msa1397910:CDS |
| AGAAATTTGATTCCGGCGAG+CGG | 0.487702 | tig0022216:+41829 | None:intergenic |
| GTTTCTGTAAGTTCGTTACC+AGG | 0.489394 | tig0022216:+41516 | None:intergenic |
| ATGGTGGAGCCATTGAAACT+AGG | 0.491172 | tig0022216:+41069 | None:intergenic |
| GGAGATGGCGAGCCGTTTGA+CGG | 0.495061 | tig0022216:-41372 | Msa1397910:CDS |
| GATGCCTTTCGCAATTTCAC+CGG | 0.496697 | tig0022216:-41924 | Msa1397910:CDS |
| TCCGGCCACCGTGGTTGACC+GGG | 0.503089 | tig0022216:+41570 | None:intergenic |
| GAGATCATCGTCGAAGTCAT+CGG | 0.503223 | tig0022216:+41806 | None:intergenic |
| GGTACTAACCCTAGTTTCAA+TGG | 0.504380 | tig0022216:-41078 | Msa1397910:CDS |
| TGCTGGCTGAAGATGATGTA+AGG | 0.505840 | tig0022216:-41119 | Msa1397910:CDS |
| CTAACCTACGCGTTCTTCCC+TGG | 0.511222 | tig0022216:-41534 | Msa1397910:CDS |
| CCTTGACGCTGCAGAGGACT+GGG | 0.516508 | tig0022216:-41298 | Msa1397910:CDS |
| GGCGTAGCGGATATCATTAA+CGG | 0.519895 | tig0022216:-41687 | Msa1397910:CDS |
| CTGTGAAATGTGATACTGTA+TGG | 0.521898 | tig0022216:+41598 | None:intergenic |
| GAGAGAATGAAAATGTGAAA+GGG | 0.523940 | tig0022216:+42030 | None:intergenic |
| CTCCACCATCACGTCGTCAC+CGG | 0.525098 | tig0022216:-41055 | Msa1397910:CDS |
| CTTCTTCTTTGTGGTTCCCG+TGG | 0.525899 | tig0022216:-40999 | Msa1397910:CDS |
| ATTAAGATTGGATTCTTCAA+CGG | 0.529726 | tig0022216:-41402 | Msa1397910:CDS |
| TGGTGGAGCCATTGAAACTA+GGG | 0.533361 | tig0022216:+41070 | None:intergenic |
| CGGTTACATTCCCCGCTCGC+CGG | 0.541508 | tig0022216:-41841 | Msa1397910:CDS |
| ATTAGGTCACTCGTCGGTGG+AGG | 0.542053 | tig0022216:-41187 | Msa1397910:CDS |
| GGATTCTTCAACGGCGACCA+TGG | 0.542740 | tig0022216:-41393 | Msa1397910:CDS |
| GAGATTGAAATTCTTCTGGT+AGG | 0.547482 | tig0022216:+41767 | None:intergenic |
| TGGCGCATGCTTTCTCTCCA+AGG | 0.548235 | tig0022216:-41335 | Msa1397910:CDS |
| TCGTCACCGGAGAGGAATAC+CGG | 0.550247 | tig0022216:-41042 | Msa1397910:CDS |
| GTTCCTAAGCTTCCGTCAAA+CGG | 0.550741 | tig0022216:+41360 | None:intergenic |
| CGGTCAACCACGGTGGCCGG+AGG | 0.551139 | tig0022216:-41568 | Msa1397910:CDS |
| CAAACGGCTCGCCATCTCCA+TGG | 0.551751 | tig0022216:+41376 | None:intergenic |
| GTTAGCTCCTGCTTTCCCTC+CGG | 0.552722 | tig0022216:+41552 | None:intergenic |
| AGTAGTTCTTTAAATTAGAG+AGG | 0.554718 | tig0022216:+41874 | None:intergenic |
| TGCTTTCCCTCCGGCCACCG+TGG | 0.558673 | tig0022216:+41561 | None:intergenic |
| AACAGCGTTTGCACGGTGGT+CGG | 0.559595 | tig0022216:-41475 | Msa1397910:CDS |
| CCGTTGCCGGTATTCCTCTC+CGG | 0.560708 | tig0022216:+41036 | None:intergenic |
| AAGAACTACTTCCAACACTT+CGG | 0.561625 | tig0022216:-41861 | Msa1397910:CDS |
| ACGGATGAAGAAAGTAGTGC+TGG | 0.562431 | tig0022216:-41136 | Msa1397910:CDS |
| CTCCGGTGACGACGTGATGG+TGG | 0.568349 | tig0022216:+41053 | None:intergenic |
| AGAATGAAAATGTGAAAGGG+AGG | 0.568946 | tig0022216:+42033 | None:intergenic |
| TCTTCGCAACAGCGTTTGCA+CGG | 0.569638 | tig0022216:-41482 | Msa1397910:CDS |
| CCCAGTCCTCTGCAGCGTCA+AGG | 0.569873 | tig0022216:+41298 | None:intergenic |
| GATTCTAAATCCACCGCAGT+TGG | 0.572285 | tig0022216:+41243 | None:intergenic |
| AAATTTGATTCCGGCGAGCG+GGG | 0.579169 | tig0022216:+41831 | None:intergenic |
| CATGCTTTCTCTCCAAGGAA+CGG | 0.580918 | tig0022216:-41330 | Msa1397910:CDS |
| AACGTGGTAGCATGACCTGC+CGG | 0.584798 | tig0022216:+41712 | None:intergenic |
| TTCAACGGCGACCATGGAGA+TGG | 0.585165 | tig0022216:-41387 | Msa1397910:CDS |
| GTTTCACCTTGACGCTGCAG+AGG | 0.589826 | tig0022216:-41304 | Msa1397910:CDS |
| AGTCATGTCGTCGAGCTCAC+CGG | 0.590938 | tig0022216:+41737 | None:intergenic |
| TGCGGTGGATTTAGAATCAG+TGG | 0.593068 | tig0022216:-41238 | Msa1397910:CDS |
| CTTTCTCTCCAAGGAACGGG+AGG | 0.593143 | tig0022216:-41326 | Msa1397910:CDS |
| GTGCCGGGAGGTATCCAAGA+GGG | 0.593782 | tig0022216:+41966 | None:intergenic |
| AAATTGCGAAAGGCATCCCA+CGG | 0.595285 | tig0022216:+41930 | None:intergenic |
| AACAGAGAGAAAAGTCTCCA+CGG | 0.595850 | tig0022216:+40982 | None:intergenic |
| CCTCTCCGGTGACGACGTGA+TGG | 0.596587 | tig0022216:+41050 | None:intergenic |
| TGCCGGGAGGTATCCAAGAG+GGG | 0.597745 | tig0022216:+41967 | None:intergenic |
| TGACGGAAGCTTAGGAACGC+TGG | 0.602552 | tig0022216:-41355 | Msa1397910:CDS |
| GGGGAATGTAACCGAAGTGT+TGG | 0.602813 | tig0022216:+41850 | None:intergenic |
| AGCGTTTGCACGGTGGTCGG+AGG | 0.605846 | tig0022216:-41472 | Msa1397910:CDS |
| AGGTATCCAAGAGGGGACGT+CGG | 0.606793 | tig0022216:+41974 | None:intergenic |
| AGCTCGACGACATGACTCTC+CGG | 0.609131 | tig0022216:-41731 | Msa1397910:CDS |
| CCTCCCGGCACTCCCCGGGT+CGG | 0.609284 | tig0022216:-41954 | Msa1397910:CDS |
| GTTAGGATTAGGTCACTCGT+CGG | 0.612532 | tig0022216:-41193 | Msa1397910:CDS |
| CGACGACATGACTCTCCGGC+AGG | 0.614104 | tig0022216:-41727 | Msa1397910:CDS |
| CAGTCTTTCCCGGTCAACCA+CGG | 0.614184 | tig0022216:-41578 | Msa1397910:CDS |
| ACAGAGAGAAAAGTCTCCAC+GGG | 0.617841 | tig0022216:+40983 | None:intergenic |
| GGTCAACCACGGTGGCCGGA+GGG | 0.618646 | tig0022216:-41567 | Msa1397910:CDS |
| AACTACCATGAACGCCGGCA+AGG | 0.625626 | tig0022216:-41661 | Msa1397910:CDS |
| GTCCCCTCTTGGATACCTCC+CGG | 0.630970 | tig0022216:-41969 | Msa1397910:CDS |
| AGGATTAGGTCACTCGTCGG+TGG | 0.634188 | tig0022216:-41190 | Msa1397910:CDS |
| GTCGTCGTTACCAACTGCGG+TGG | 0.637199 | tig0022216:-41253 | Msa1397910:CDS |
| CCGGAGAGGAATACCGGCAA+CGG | 0.639450 | tig0022216:-41036 | Msa1397910:CDS |
| TTCATCCGTGACGATATCGT+CGG | 0.640422 | tig0022216:+41150 | None:intergenic |
| AATTGCGAAAGGCATCCCAC+GGG | 0.643400 | tig0022216:+41931 | None:intergenic |
| AGTGCCGGGAGGTATCCAAG+AGG | 0.644275 | tig0022216:+41965 | None:intergenic |
| TTTCTGTAAGTTCGTTACCA+GGG | 0.652661 | tig0022216:+41517 | None:intergenic |
| GAGAGGAATACCGGCAACGG+TGG | 0.653792 | tig0022216:-41033 | Msa1397910:CDS |
| GCTGGCTGAAGATGATGTAA+GGG | 0.654357 | tig0022216:-41118 | Msa1397910:CDS |
| GCTACCACGTTGCGGCGTAG+CGG | 0.663069 | tig0022216:-41700 | Msa1397910:CDS |
| GCAGCCGGTGAAATTGCGAA+AGG | 0.667426 | tig0022216:+41920 | None:intergenic |
| GGAACCACAAAGAAGAAGTG+AGG | 0.678184 | tig0022216:+41004 | None:intergenic |
| CCATCACGTCGTCACCGGAG+AGG | 0.679279 | tig0022216:-41050 | Msa1397910:CDS |
| GTTACCAGGGAAGAACGCGT+AGG | 0.683343 | tig0022216:+41530 | None:intergenic |
| CAGGTCATGCTACCACGTTG+CGG | 0.692886 | tig0022216:-41708 | Msa1397910:CDS |
| TGTTTCCGACGATATCGTCA+CGG | 0.697523 | tig0022216:-41155 | Msa1397910:CDS |
| CAAACAGTGACAGCAAGCTG+CGG | 0.704212 | tig0022216:-41623 | Msa1397910:CDS |
| TCGCAACAGCGTTTGCACGG+TGG | 0.704349 | tig0022216:-41479 | Msa1397910:CDS |
| ATAGACGAGCAGAAACAATG+AGG | 0.706815 | tig0022216:+42000 | None:intergenic |
| CTGGCTGAAGATGATGTAAG+GGG | 0.707956 | tig0022216:-41117 | Msa1397910:CDS |
| GAAGTCGTCGTTACCAACTG+CGG | 0.713163 | tig0022216:-41256 | Msa1397910:CDS |
| TGTTTCGGTGAATTTGAGCG+TGG | 0.715877 | tig0022216:+41446 | None:intergenic |
| ATATCCGCTACGCCGCAACG+TGG | 0.719735 | tig0022216:+41696 | None:intergenic |
| GGTACAACTACCATGAACGC+CGG | 0.720442 | tig0022216:-41666 | Msa1397910:CDS |
| GGTGGATTTAGAATCAGTGG+CGG | 0.737330 | tig0022216:-41235 | Msa1397910:CDS |
| CATCAAGGCGAAAACTACAA+CGG | 0.737671 | tig0022216:-41897 | Msa1397910:CDS |
| TCTTTCCCGGTCAACCACGG+TGG | 0.752845 | tig0022216:-41575 | Msa1397910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AGTAGTTCTTTAAATTAGAG+AGG | + | tig0022216:41133-41152 | None:intergenic | 25.0% |
| ! | AATTTCAATCTCAATGTAAC+CGG | - | tig0022216:41248-41267 | Msa1397910:CDS | 25.0% |
| ! | ATTAAGATTGGATTCTTCAA+CGG | - | tig0022216:41602-41621 | Msa1397910:CDS | 25.0% |
| ! | AGGGGAATTCAATATTTATA+TGG | - | tig0022216:41905-41924 | Msa1397910:CDS | 25.0% |
| ! | AGTAGTTCTTTAAATTAGAG+AGG | + | tig0022216:41133-41152 | None:intergenic | 25.0% |
| ! | AATTTCAATCTCAATGTAAC+CGG | - | tig0022216:41248-41267 | Msa1397910:CDS | 25.0% |
| ! | ATTAAGATTGGATTCTTCAA+CGG | - | tig0022216:41602-41621 | Msa1397910:CDS | 25.0% |
| ! | AGGGGAATTCAATATTTATA+TGG | - | tig0022216:41905-41924 | Msa1397910:CDS | 25.0% |
| GAGAGAATGAAAATGTGAAA+GGG | + | tig0022216:40977-40996 | None:intergenic | 30.0% | |
| AGAGAGAATGAAAATGTGAA+AGG | + | tig0022216:40978-40997 | None:intergenic | 30.0% | |
| CATTGAGATTGAAATTCTTC+TGG | + | tig0022216:41244-41263 | None:intergenic | 30.0% | |
| GAGAGAATGAAAATGTGAAA+GGG | + | tig0022216:40977-40996 | None:intergenic | 30.0% | |
| AGAGAGAATGAAAATGTGAA+AGG | + | tig0022216:40978-40997 | None:intergenic | 30.0% | |
| CATTGAGATTGAAATTCTTC+TGG | + | tig0022216:41244-41263 | None:intergenic | 30.0% | |
| AGAATGAAAATGTGAAAGGG+AGG | + | tig0022216:40974-40993 | None:intergenic | 35.0% | |
| AAGAACTACTTCCAACACTT+CGG | - | tig0022216:41143-41162 | Msa1397910:CDS | 35.0% | |
| TCATCGGAGAAATTTGATTC+CGG | + | tig0022216:41185-41204 | None:intergenic | 35.0% | |
| !!! | GGTAGGTTTTAATTGCTTCT+TGG | + | tig0022216:41223-41242 | None:intergenic | 35.0% |
| GAGATTGAAATTCTTCTGGT+AGG | + | tig0022216:41240-41259 | None:intergenic | 35.0% | |
| CTGTGAAATGTGATACTGTA+TGG | + | tig0022216:41409-41428 | None:intergenic | 35.0% | |
| TTTCTGTAAGTTCGTTACCA+GGG | + | tig0022216:41490-41509 | None:intergenic | 35.0% | |
| ACCGAAACAACGTTATATTC+AGG | - | tig0022216:41572-41591 | Msa1397910:CDS | 35.0% | |
| GCCTGAATATAACGTTGTTT+CGG | + | tig0022216:41576-41595 | None:intergenic | 35.0% | |
| ! | ATTGGGCATTTGTTAGGATT+AGG | - | tig0022216:41800-41819 | Msa1397910:CDS | 35.0% |
| AGAATGAAAATGTGAAAGGG+AGG | + | tig0022216:40974-40993 | None:intergenic | 35.0% | |
| AAGAACTACTTCCAACACTT+CGG | - | tig0022216:41143-41162 | Msa1397910:CDS | 35.0% | |
| TCATCGGAGAAATTTGATTC+CGG | + | tig0022216:41185-41204 | None:intergenic | 35.0% | |
| !!! | GGTAGGTTTTAATTGCTTCT+TGG | + | tig0022216:41223-41242 | None:intergenic | 35.0% |
| GAGATTGAAATTCTTCTGGT+AGG | + | tig0022216:41240-41259 | None:intergenic | 35.0% | |
| CTGTGAAATGTGATACTGTA+TGG | + | tig0022216:41409-41428 | None:intergenic | 35.0% | |
| TTTCTGTAAGTTCGTTACCA+GGG | + | tig0022216:41490-41509 | None:intergenic | 35.0% | |
| ACCGAAACAACGTTATATTC+AGG | - | tig0022216:41572-41591 | Msa1397910:CDS | 35.0% | |
| GCCTGAATATAACGTTGTTT+CGG | + | tig0022216:41576-41595 | None:intergenic | 35.0% | |
| ! | ATTGGGCATTTGTTAGGATT+AGG | - | tig0022216:41800-41819 | Msa1397910:CDS | 35.0% |
| ATAGACGAGCAGAAACAATG+AGG | + | tig0022216:41007-41026 | None:intergenic | 40.0% | |
| CATCAAGGCGAAAACTACAA+CGG | - | tig0022216:41107-41126 | Msa1397910:CDS | 40.0% | |
| TCACATTTCACAGTCTTTCC+CGG | - | tig0022216:41416-41435 | Msa1397910:CDS | 40.0% | |
| GTTTCTGTAAGTTCGTTACC+AGG | + | tig0022216:41491-41510 | None:intergenic | 40.0% | |
| !! | TCAGGCGCTGATATTAAGAT+TGG | - | tig0022216:41590-41609 | Msa1397910:CDS | 40.0% |
| CATGAGATTGGGCATTTGTT+AGG | - | tig0022216:41794-41813 | Msa1397910:CDS | 40.0% | |
| GGTACTAACCCTAGTTTCAA+TGG | - | tig0022216:41926-41945 | Msa1397910:CDS | 40.0% | |
| AACAGAGAGAAAAGTCTCCA+CGG | + | tig0022216:42025-42044 | None:intergenic | 40.0% | |
| ATAGACGAGCAGAAACAATG+AGG | + | tig0022216:41007-41026 | None:intergenic | 40.0% | |
| CATCAAGGCGAAAACTACAA+CGG | - | tig0022216:41107-41126 | Msa1397910:CDS | 40.0% | |
| TCACATTTCACAGTCTTTCC+CGG | - | tig0022216:41416-41435 | Msa1397910:CDS | 40.0% | |
| GTTTCTGTAAGTTCGTTACC+AGG | + | tig0022216:41491-41510 | None:intergenic | 40.0% | |
| !! | TCAGGCGCTGATATTAAGAT+TGG | - | tig0022216:41590-41609 | Msa1397910:CDS | 40.0% |
| CATGAGATTGGGCATTTGTT+AGG | - | tig0022216:41794-41813 | Msa1397910:CDS | 40.0% | |
| GGTACTAACCCTAGTTTCAA+TGG | - | tig0022216:41926-41945 | Msa1397910:CDS | 40.0% | |
| AACAGAGAGAAAAGTCTCCA+CGG | + | tig0022216:42025-42044 | None:intergenic | 40.0% | |
| !! | AAATTGCGAAAGGCATCCCA+CGG | + | tig0022216:41077-41096 | None:intergenic | 45.0% |
| GATGCCTTTCGCAATTTCAC+CGG | - | tig0022216:41080-41099 | Msa1397910:CDS | 45.0% | |
| ! | CGTTGTAGTTTTCGCCTTGA+TGG | + | tig0022216:41109-41128 | None:intergenic | 45.0% |
| AGAAATTTGATTCCGGCGAG+CGG | + | tig0022216:41178-41197 | None:intergenic | 45.0% | |
| GAGATCATCGTCGAAGTCAT+CGG | + | tig0022216:41201-41220 | None:intergenic | 45.0% | |
| !! | GGCGTAGCGGATATCATTAA+CGG | - | tig0022216:41317-41336 | Msa1397910:CDS | 45.0% |
| ! | TGTTGCGAAGACGCTTTTCA+CGG | + | tig0022216:41513-41532 | None:intergenic | 45.0% |
| TGTTTCGGTGAATTTGAGCG+TGG | + | tig0022216:41561-41580 | None:intergenic | 45.0% | |
| GTTCCTAAGCTTCCGTCAAA+CGG | + | tig0022216:41647-41666 | None:intergenic | 45.0% | |
| CATGCTTTCTCTCCAAGGAA+CGG | - | tig0022216:41674-41693 | Msa1397910:CDS | 45.0% | |
| ATGCTTTCTCTCCAAGGAAC+GGG | - | tig0022216:41675-41694 | Msa1397910:CDS | 45.0% | |
| GATTCTAAATCCACCGCAGT+TGG | + | tig0022216:41764-41783 | None:intergenic | 45.0% | |
| ! | TGCGGTGGATTTAGAATCAG+TGG | - | tig0022216:41766-41785 | Msa1397910:CDS | 45.0% |
| ! | GGTGGATTTAGAATCAGTGG+CGG | - | tig0022216:41769-41788 | Msa1397910:CDS | 45.0% |
| GTTAGGATTAGGTCACTCGT+CGG | - | tig0022216:41811-41830 | Msa1397910:CDS | 45.0% | |
| TGTTTCCGACGATATCGTCA+CGG | - | tig0022216:41849-41868 | Msa1397910:CDS | 45.0% | |
| TTCATCCGTGACGATATCGT+CGG | + | tig0022216:41857-41876 | None:intergenic | 45.0% | |
| ACGGATGAAGAAAGTAGTGC+TGG | - | tig0022216:41868-41887 | Msa1397910:CDS | 45.0% | |
| ! | TGCTGGCTGAAGATGATGTA+AGG | - | tig0022216:41885-41904 | Msa1397910:CDS | 45.0% |
| GCTGGCTGAAGATGATGTAA+GGG | - | tig0022216:41886-41905 | Msa1397910:CDS | 45.0% | |
| CTGGCTGAAGATGATGTAAG+GGG | - | tig0022216:41887-41906 | Msa1397910:CDS | 45.0% | |
| TGGTGGAGCCATTGAAACTA+GGG | + | tig0022216:41937-41956 | None:intergenic | 45.0% | |
| ! | ATGGTGGAGCCATTGAAACT+AGG | + | tig0022216:41938-41957 | None:intergenic | 45.0% |
| ACAGCCTCACTTCTTCTTTG+TGG | - | tig0022216:41996-42015 | Msa1397910:CDS | 45.0% | |
| GGAACCACAAAGAAGAAGTG+AGG | + | tig0022216:42003-42022 | None:intergenic | 45.0% | |
| ACAGAGAGAAAAGTCTCCAC+GGG | + | tig0022216:42024-42043 | None:intergenic | 45.0% | |
| !! | AAATTGCGAAAGGCATCCCA+CGG | + | tig0022216:41077-41096 | None:intergenic | 45.0% |
| GATGCCTTTCGCAATTTCAC+CGG | - | tig0022216:41080-41099 | Msa1397910:CDS | 45.0% | |
| ! | CGTTGTAGTTTTCGCCTTGA+TGG | + | tig0022216:41109-41128 | None:intergenic | 45.0% |
| AGAAATTTGATTCCGGCGAG+CGG | + | tig0022216:41178-41197 | None:intergenic | 45.0% | |
| GAGATCATCGTCGAAGTCAT+CGG | + | tig0022216:41201-41220 | None:intergenic | 45.0% | |
| !! | GGCGTAGCGGATATCATTAA+CGG | - | tig0022216:41317-41336 | Msa1397910:CDS | 45.0% |
| ! | TGTTGCGAAGACGCTTTTCA+CGG | + | tig0022216:41513-41532 | None:intergenic | 45.0% |
| TGTTTCGGTGAATTTGAGCG+TGG | + | tig0022216:41561-41580 | None:intergenic | 45.0% | |
| GTTCCTAAGCTTCCGTCAAA+CGG | + | tig0022216:41647-41666 | None:intergenic | 45.0% | |
| CATGCTTTCTCTCCAAGGAA+CGG | - | tig0022216:41674-41693 | Msa1397910:CDS | 45.0% | |
| ATGCTTTCTCTCCAAGGAAC+GGG | - | tig0022216:41675-41694 | Msa1397910:CDS | 45.0% | |
| GATTCTAAATCCACCGCAGT+TGG | + | tig0022216:41764-41783 | None:intergenic | 45.0% | |
| ! | TGCGGTGGATTTAGAATCAG+TGG | - | tig0022216:41766-41785 | Msa1397910:CDS | 45.0% |
| ! | GGTGGATTTAGAATCAGTGG+CGG | - | tig0022216:41769-41788 | Msa1397910:CDS | 45.0% |
| GTTAGGATTAGGTCACTCGT+CGG | - | tig0022216:41811-41830 | Msa1397910:CDS | 45.0% | |
| TGTTTCCGACGATATCGTCA+CGG | - | tig0022216:41849-41868 | Msa1397910:CDS | 45.0% | |
| TTCATCCGTGACGATATCGT+CGG | + | tig0022216:41857-41876 | None:intergenic | 45.0% | |
| ACGGATGAAGAAAGTAGTGC+TGG | - | tig0022216:41868-41887 | Msa1397910:CDS | 45.0% | |
| ! | TGCTGGCTGAAGATGATGTA+AGG | - | tig0022216:41885-41904 | Msa1397910:CDS | 45.0% |
| GCTGGCTGAAGATGATGTAA+GGG | - | tig0022216:41886-41905 | Msa1397910:CDS | 45.0% | |
| CTGGCTGAAGATGATGTAAG+GGG | - | tig0022216:41887-41906 | Msa1397910:CDS | 45.0% | |
| TGGTGGAGCCATTGAAACTA+GGG | + | tig0022216:41937-41956 | None:intergenic | 45.0% | |
| ! | ATGGTGGAGCCATTGAAACT+AGG | + | tig0022216:41938-41957 | None:intergenic | 45.0% |
| ACAGCCTCACTTCTTCTTTG+TGG | - | tig0022216:41996-42015 | Msa1397910:CDS | 45.0% | |
| GGAACCACAAAGAAGAAGTG+AGG | + | tig0022216:42003-42022 | None:intergenic | 45.0% | |
| ACAGAGAGAAAAGTCTCCAC+GGG | + | tig0022216:42024-42043 | None:intergenic | 45.0% | |
| !! | AATTGCGAAAGGCATCCCAC+GGG | + | tig0022216:41076-41095 | None:intergenic | 50.0% |
| ! | AATTTCACCGGCTGCCATCA+AGG | - | tig0022216:41092-41111 | Msa1397910:CDS | 50.0% |
| GGGGAATGTAACCGAAGTGT+TGG | + | tig0022216:41157-41176 | None:intergenic | 50.0% | |
| AAATTTGATTCCGGCGAGCG+GGG | + | tig0022216:41176-41195 | None:intergenic | 50.0% | |
| GAAATTTGATTCCGGCGAGC+GGG | + | tig0022216:41177-41196 | None:intergenic | 50.0% | |
| GGTACAACTACCATGAACGC+CGG | - | tig0022216:41338-41357 | Msa1397910:CDS | 50.0% | |
| !! | CGTTGTTTCTGTGTCCTTGC+CGG | + | tig0022216:41360-41379 | None:intergenic | 50.0% |
| CAAACAGTGACAGCAAGCTG+CGG | - | tig0022216:41381-41400 | Msa1397910:CDS | 50.0% | |
| TCTTCGCAACAGCGTTTGCA+CGG | - | tig0022216:41522-41541 | Msa1397910:CDS | 50.0% | |
| GAAGTCGTCGTTACCAACTG+CGG | - | tig0022216:41748-41767 | Msa1397910:CDS | 50.0% | |
| CTTCTTCTTTGTGGTTCCCG+TGG | - | tig0022216:42005-42024 | Msa1397910:CDS | 50.0% | |
| !! | AATTGCGAAAGGCATCCCAC+GGG | + | tig0022216:41076-41095 | None:intergenic | 50.0% |
| ! | AATTTCACCGGCTGCCATCA+AGG | - | tig0022216:41092-41111 | Msa1397910:CDS | 50.0% |
| GGGGAATGTAACCGAAGTGT+TGG | + | tig0022216:41157-41176 | None:intergenic | 50.0% | |
| AAATTTGATTCCGGCGAGCG+GGG | + | tig0022216:41176-41195 | None:intergenic | 50.0% | |
| GAAATTTGATTCCGGCGAGC+GGG | + | tig0022216:41177-41196 | None:intergenic | 50.0% | |
| GGTACAACTACCATGAACGC+CGG | - | tig0022216:41338-41357 | Msa1397910:CDS | 50.0% | |
| !! | CGTTGTTTCTGTGTCCTTGC+CGG | + | tig0022216:41360-41379 | None:intergenic | 50.0% |
| CAAACAGTGACAGCAAGCTG+CGG | - | tig0022216:41381-41400 | Msa1397910:CDS | 50.0% | |
| TCTTCGCAACAGCGTTTGCA+CGG | - | tig0022216:41522-41541 | Msa1397910:CDS | 50.0% | |
| GAAGTCGTCGTTACCAACTG+CGG | - | tig0022216:41748-41767 | Msa1397910:CDS | 50.0% | |
| CTTCTTCTTTGTGGTTCCCG+TGG | - | tig0022216:42005-42024 | Msa1397910:CDS | 50.0% | |
| TATTTCCCGACGTCCCCTCT+TGG | - | tig0022216:41024-41043 | Msa1397910:CDS | 55.0% | |
| AGGTATCCAAGAGGGGACGT+CGG | + | tig0022216:41033-41052 | None:intergenic | 55.0% | |
| GCAGCCGGTGAAATTGCGAA+AGG | + | tig0022216:41087-41106 | None:intergenic | 55.0% | |
| !! | GTTTTCGCCTTGATGGCAGC+CGG | + | tig0022216:41102-41121 | None:intergenic | 55.0% |
| AGTCATGTCGTCGAGCTCAC+CGG | + | tig0022216:41270-41289 | None:intergenic | 55.0% | |
| AGCTCGACGACATGACTCTC+CGG | - | tig0022216:41273-41292 | Msa1397910:CDS | 55.0% | |
| AACGTGGTAGCATGACCTGC+CGG | + | tig0022216:41295-41314 | None:intergenic | 55.0% | |
| CAGGTCATGCTACCACGTTG+CGG | - | tig0022216:41296-41315 | Msa1397910:CDS | 55.0% | |
| AACTACCATGAACGCCGGCA+AGG | - | tig0022216:41343-41362 | Msa1397910:CDS | 55.0% | |
| CAGTCTTTCCCGGTCAACCA+CGG | - | tig0022216:41426-41445 | Msa1397910:CDS | 55.0% | |
| GTTAGCTCCTGCTTTCCCTC+CGG | + | tig0022216:41455-41474 | None:intergenic | 55.0% | |
| CTAACCTACGCGTTCTTCCC+TGG | - | tig0022216:41470-41489 | Msa1397910:CDS | 55.0% | |
| GTTACCAGGGAAGAACGCGT+AGG | + | tig0022216:41477-41496 | None:intergenic | 55.0% | |
| AACAGCGTTTGCACGGTGGT+CGG | - | tig0022216:41529-41548 | Msa1397910:CDS | 55.0% | |
| GGATTCTTCAACGGCGACCA+TGG | - | tig0022216:41611-41630 | Msa1397910:CDS | 55.0% | |
| TTCAACGGCGACCATGGAGA+TGG | - | tig0022216:41617-41636 | Msa1397910:CDS | 55.0% | |
| GAGCCGTTTGACGGAAGCTT+AGG | - | tig0022216:41641-41660 | Msa1397910:CDS | 55.0% | |
| TGACGGAAGCTTAGGAACGC+TGG | - | tig0022216:41649-41668 | Msa1397910:CDS | 55.0% | |
| TGGCGCATGCTTTCTCTCCA+AGG | - | tig0022216:41669-41688 | Msa1397910:CDS | 55.0% | |
| CTTTCTCTCCAAGGAACGGG+AGG | - | tig0022216:41678-41697 | Msa1397910:CDS | 55.0% | |
| AGGTGAAACCTCCCGTTCCT+TGG | + | tig0022216:41689-41708 | None:intergenic | 55.0% | |
| GTTTCACCTTGACGCTGCAG+AGG | - | tig0022216:41700-41719 | Msa1397910:CDS | 55.0% | |
| GCAGAGGACTGGGTAGTTTC+CGG | - | tig0022216:41716-41735 | Msa1397910:CDS | 55.0% | |
| TCAGTGGCGGTGCATGAGAT+TGG | - | tig0022216:41782-41801 | Msa1397910:CDS | 55.0% | |
| CAGTGGCGGTGCATGAGATT+GGG | - | tig0022216:41783-41802 | Msa1397910:CDS | 55.0% | |
| AGGATTAGGTCACTCGTCGG+TGG | - | tig0022216:41814-41833 | Msa1397910:CDS | 55.0% | |
| ATTAGGTCACTCGTCGGTGG+AGG | - | tig0022216:41817-41836 | Msa1397910:CDS | 55.0% | |
| TCGTCACCGGAGAGGAATAC+CGG | - | tig0022216:41962-41981 | Msa1397910:CDS | 55.0% | |
| TATTTCCCGACGTCCCCTCT+TGG | - | tig0022216:41024-41043 | Msa1397910:CDS | 55.0% | |
| AGGTATCCAAGAGGGGACGT+CGG | + | tig0022216:41033-41052 | None:intergenic | 55.0% | |
| GCAGCCGGTGAAATTGCGAA+AGG | + | tig0022216:41087-41106 | None:intergenic | 55.0% | |
| !! | GTTTTCGCCTTGATGGCAGC+CGG | + | tig0022216:41102-41121 | None:intergenic | 55.0% |
| AGTCATGTCGTCGAGCTCAC+CGG | + | tig0022216:41270-41289 | None:intergenic | 55.0% | |
| AGCTCGACGACATGACTCTC+CGG | - | tig0022216:41273-41292 | Msa1397910:CDS | 55.0% | |
| AACGTGGTAGCATGACCTGC+CGG | + | tig0022216:41295-41314 | None:intergenic | 55.0% | |
| CAGGTCATGCTACCACGTTG+CGG | - | tig0022216:41296-41315 | Msa1397910:CDS | 55.0% | |
| AACTACCATGAACGCCGGCA+AGG | - | tig0022216:41343-41362 | Msa1397910:CDS | 55.0% | |
| CAGTCTTTCCCGGTCAACCA+CGG | - | tig0022216:41426-41445 | Msa1397910:CDS | 55.0% | |
| GTTAGCTCCTGCTTTCCCTC+CGG | + | tig0022216:41455-41474 | None:intergenic | 55.0% | |
| CTAACCTACGCGTTCTTCCC+TGG | - | tig0022216:41470-41489 | Msa1397910:CDS | 55.0% | |
| GTTACCAGGGAAGAACGCGT+AGG | + | tig0022216:41477-41496 | None:intergenic | 55.0% | |
| AACAGCGTTTGCACGGTGGT+CGG | - | tig0022216:41529-41548 | Msa1397910:CDS | 55.0% | |
| GGATTCTTCAACGGCGACCA+TGG | - | tig0022216:41611-41630 | Msa1397910:CDS | 55.0% | |
| TTCAACGGCGACCATGGAGA+TGG | - | tig0022216:41617-41636 | Msa1397910:CDS | 55.0% | |
| GAGCCGTTTGACGGAAGCTT+AGG | - | tig0022216:41641-41660 | Msa1397910:CDS | 55.0% | |
| TGACGGAAGCTTAGGAACGC+TGG | - | tig0022216:41649-41668 | Msa1397910:CDS | 55.0% | |
| TGGCGCATGCTTTCTCTCCA+AGG | - | tig0022216:41669-41688 | Msa1397910:CDS | 55.0% | |
| CTTTCTCTCCAAGGAACGGG+AGG | - | tig0022216:41678-41697 | Msa1397910:CDS | 55.0% | |
| AGGTGAAACCTCCCGTTCCT+TGG | + | tig0022216:41689-41708 | None:intergenic | 55.0% | |
| GTTTCACCTTGACGCTGCAG+AGG | - | tig0022216:41700-41719 | Msa1397910:CDS | 55.0% | |
| GCAGAGGACTGGGTAGTTTC+CGG | - | tig0022216:41716-41735 | Msa1397910:CDS | 55.0% | |
| TCAGTGGCGGTGCATGAGAT+TGG | - | tig0022216:41782-41801 | Msa1397910:CDS | 55.0% | |
| CAGTGGCGGTGCATGAGATT+GGG | - | tig0022216:41783-41802 | Msa1397910:CDS | 55.0% | |
| AGGATTAGGTCACTCGTCGG+TGG | - | tig0022216:41814-41833 | Msa1397910:CDS | 55.0% | |
| ATTAGGTCACTCGTCGGTGG+AGG | - | tig0022216:41817-41836 | Msa1397910:CDS | 55.0% | |
| TCGTCACCGGAGAGGAATAC+CGG | - | tig0022216:41962-41981 | Msa1397910:CDS | 55.0% | |
| GGTATCCAAGAGGGGACGTC+GGG | + | tig0022216:41032-41051 | None:intergenic | 60.0% | |
| GTCCCCTCTTGGATACCTCC+CGG | - | tig0022216:41035-41054 | Msa1397910:CDS | 60.0% | |
| !! | TGCCGGGAGGTATCCAAGAG+GGG | + | tig0022216:41040-41059 | None:intergenic | 60.0% |
| !! | GTGCCGGGAGGTATCCAAGA+GGG | + | tig0022216:41041-41060 | None:intergenic | 60.0% |
| !! | AGTGCCGGGAGGTATCCAAG+AGG | + | tig0022216:41042-41061 | None:intergenic | 60.0% |
| ATATCCGCTACGCCGCAACG+TGG | + | tig0022216:41311-41330 | None:intergenic | 60.0% | |
| TGTGTCCTTGCCGGCGTTCA+TGG | + | tig0022216:41351-41370 | None:intergenic | 60.0% | |
| TCTTTCCCGGTCAACCACGG+TGG | - | tig0022216:41429-41448 | Msa1397910:CDS | 60.0% | |
| TCGCAACAGCGTTTGCACGG+TGG | - | tig0022216:41525-41544 | Msa1397910:CDS | 60.0% | |
| CAAACGGCTCGCCATCTCCA+TGG | + | tig0022216:41631-41650 | None:intergenic | 60.0% | |
| GGAGATGGCGAGCCGTTTGA+CGG | - | tig0022216:41632-41651 | Msa1397910:CDS | 60.0% | |
| ACCTTGACGCTGCAGAGGAC+TGG | - | tig0022216:41705-41724 | Msa1397910:CDS | 60.0% | |
| CCTTGACGCTGCAGAGGACT+GGG | - | tig0022216:41706-41725 | Msa1397910:CDS | 60.0% | |
| CGACGACTTCGACACATCGC+CGG | + | tig0022216:41738-41757 | None:intergenic | 60.0% | |
| GTCGTCGTTACCAACTGCGG+TGG | - | tig0022216:41751-41770 | Msa1397910:CDS | 60.0% | |
| CTCCACCATCACGTCGTCAC+CGG | - | tig0022216:41949-41968 | Msa1397910:CDS | 60.0% | |
| CCGTTGCCGGTATTCCTCTC+CGG | + | tig0022216:41971-41990 | None:intergenic | 60.0% | |
| CCGGAGAGGAATACCGGCAA+CGG | - | tig0022216:41968-41987 | Msa1397910:CDS | 60.0% | |
| GAGAGGAATACCGGCAACGG+TGG | - | tig0022216:41971-41990 | Msa1397910:CDS | 60.0% | |
| GAGGCTGTAACCACCGTTGC+CGG | + | tig0022216:41984-42003 | None:intergenic | 60.0% | |
| GGTATCCAAGAGGGGACGTC+GGG | + | tig0022216:41032-41051 | None:intergenic | 60.0% | |
| GTCCCCTCTTGGATACCTCC+CGG | - | tig0022216:41035-41054 | Msa1397910:CDS | 60.0% | |
| !! | TGCCGGGAGGTATCCAAGAG+GGG | + | tig0022216:41040-41059 | None:intergenic | 60.0% |
| !! | GTGCCGGGAGGTATCCAAGA+GGG | + | tig0022216:41041-41060 | None:intergenic | 60.0% |
| !! | AGTGCCGGGAGGTATCCAAG+AGG | + | tig0022216:41042-41061 | None:intergenic | 60.0% |
| ATATCCGCTACGCCGCAACG+TGG | + | tig0022216:41311-41330 | None:intergenic | 60.0% | |
| TGTGTCCTTGCCGGCGTTCA+TGG | + | tig0022216:41351-41370 | None:intergenic | 60.0% | |
| TCTTTCCCGGTCAACCACGG+TGG | - | tig0022216:41429-41448 | Msa1397910:CDS | 60.0% | |
| TCGCAACAGCGTTTGCACGG+TGG | - | tig0022216:41525-41544 | Msa1397910:CDS | 60.0% | |
| CAAACGGCTCGCCATCTCCA+TGG | + | tig0022216:41631-41650 | None:intergenic | 60.0% | |
| GGAGATGGCGAGCCGTTTGA+CGG | - | tig0022216:41632-41651 | Msa1397910:CDS | 60.0% | |
| ACCTTGACGCTGCAGAGGAC+TGG | - | tig0022216:41705-41724 | Msa1397910:CDS | 60.0% | |
| CCTTGACGCTGCAGAGGACT+GGG | - | tig0022216:41706-41725 | Msa1397910:CDS | 60.0% | |
| CGACGACTTCGACACATCGC+CGG | + | tig0022216:41738-41757 | None:intergenic | 60.0% | |
| GTCGTCGTTACCAACTGCGG+TGG | - | tig0022216:41751-41770 | Msa1397910:CDS | 60.0% | |
| CTCCACCATCACGTCGTCAC+CGG | - | tig0022216:41949-41968 | Msa1397910:CDS | 60.0% | |
| CCGTTGCCGGTATTCCTCTC+CGG | + | tig0022216:41971-41990 | None:intergenic | 60.0% | |
| CCGGAGAGGAATACCGGCAA+CGG | - | tig0022216:41968-41987 | Msa1397910:CDS | 60.0% | |
| GAGAGGAATACCGGCAACGG+TGG | - | tig0022216:41971-41990 | Msa1397910:CDS | 60.0% | |
| GAGGCTGTAACCACCGTTGC+CGG | + | tig0022216:41984-42003 | None:intergenic | 60.0% | |
| CGGTTACATTCCCCGCTCGC+CGG | - | tig0022216:41163-41182 | Msa1397910:CDS | 65.0% | |
| CGACGACATGACTCTCCGGC+AGG | - | tig0022216:41277-41296 | Msa1397910:CDS | 65.0% | |
| GCTACCACGTTGCGGCGTAG+CGG | - | tig0022216:41304-41323 | Msa1397910:CDS | 65.0% | |
| AGCGTTTGCACGGTGGTCGG+AGG | - | tig0022216:41532-41551 | Msa1397910:CDS | 65.0% | |
| CCCAGTCCTCTGCAGCGTCA+AGG | + | tig0022216:41709-41728 | None:intergenic | 65.0% | |
| CTCCGGTGACGACGTGATGG+TGG | + | tig0022216:41954-41973 | None:intergenic | 65.0% | |
| CCTCTCCGGTGACGACGTGA+TGG | + | tig0022216:41957-41976 | None:intergenic | 65.0% | |
| CCATCACGTCGTCACCGGAG+AGG | - | tig0022216:41954-41973 | Msa1397910:CDS | 65.0% | |
| CGGTTACATTCCCCGCTCGC+CGG | - | tig0022216:41163-41182 | Msa1397910:CDS | 65.0% | |
| CGACGACATGACTCTCCGGC+AGG | - | tig0022216:41277-41296 | Msa1397910:CDS | 65.0% | |
| GCTACCACGTTGCGGCGTAG+CGG | - | tig0022216:41304-41323 | Msa1397910:CDS | 65.0% | |
| AGCGTTTGCACGGTGGTCGG+AGG | - | tig0022216:41532-41551 | Msa1397910:CDS | 65.0% | |
| CCCAGTCCTCTGCAGCGTCA+AGG | + | tig0022216:41709-41728 | None:intergenic | 65.0% | |
| CTCCGGTGACGACGTGATGG+TGG | + | tig0022216:41954-41973 | None:intergenic | 65.0% | |
| CCTCTCCGGTGACGACGTGA+TGG | + | tig0022216:41957-41976 | None:intergenic | 65.0% | |
| CCATCACGTCGTCACCGGAG+AGG | - | tig0022216:41954-41973 | Msa1397910:CDS | 65.0% | |
| GGATACCTCCCGGCACTCCC+CGG | - | tig0022216:41045-41064 | Msa1397910:CDS | 70.0% | |
| GATACCTCCCGGCACTCCCC+GGG | - | tig0022216:41046-41065 | Msa1397910:CDS | 70.0% | |
| TCCCGGTCAACCACGGTGGC+CGG | - | tig0022216:41433-41452 | Msa1397910:CDS | 70.0% | |
| TCCGGCCACCGTGGTTGACC+GGG | + | tig0022216:41437-41456 | None:intergenic | 70.0% | |
| CTCCGGCCACCGTGGTTGAC+CGG | + | tig0022216:41438-41457 | None:intergenic | 70.0% | |
| GGTCAACCACGGTGGCCGGA+GGG | - | tig0022216:41437-41456 | Msa1397910:CDS | 70.0% | |
| TGCTTTCCCTCCGGCCACCG+TGG | + | tig0022216:41446-41465 | None:intergenic | 70.0% | |
| ACGGTGGCCGGAGGGAAAGC+AGG | - | tig0022216:41445-41464 | Msa1397910:CDS | 70.0% | |
| GGATACCTCCCGGCACTCCC+CGG | - | tig0022216:41045-41064 | Msa1397910:CDS | 70.0% | |
| GATACCTCCCGGCACTCCCC+GGG | - | tig0022216:41046-41065 | Msa1397910:CDS | 70.0% | |
| TCCCGGTCAACCACGGTGGC+CGG | - | tig0022216:41433-41452 | Msa1397910:CDS | 70.0% | |
| TCCGGCCACCGTGGTTGACC+GGG | + | tig0022216:41437-41456 | None:intergenic | 70.0% | |
| CTCCGGCCACCGTGGTTGAC+CGG | + | tig0022216:41438-41457 | None:intergenic | 70.0% | |
| GGTCAACCACGGTGGCCGGA+GGG | - | tig0022216:41437-41456 | Msa1397910:CDS | 70.0% | |
| TGCTTTCCCTCCGGCCACCG+TGG | + | tig0022216:41446-41465 | None:intergenic | 70.0% | |
| ACGGTGGCCGGAGGGAAAGC+AGG | - | tig0022216:41445-41464 | Msa1397910:CDS | 70.0% | |
| AGGCATCCCACGGGCCGACC+CGG | + | tig0022216:41067-41086 | None:intergenic | 75.0% | |
| CGGTCAACCACGGTGGCCGG+AGG | - | tig0022216:41436-41455 | Msa1397910:CDS | 75.0% | |
| AGGCATCCCACGGGCCGACC+CGG | + | tig0022216:41067-41086 | None:intergenic | 75.0% | |
| CGGTCAACCACGGTGGCCGG+AGG | - | tig0022216:41436-41455 | Msa1397910:CDS | 75.0% | |
| ! | CCTCCCGGCACTCCCCGGGT+CGG | - | tig0022216:41050-41069 | Msa1397910:CDS | 80.0% |
| ! | CACTCCCCGGGTCGGCCCGT+GGG | - | tig0022216:41058-41077 | Msa1397910:CDS | 80.0% |
| ! | GCATCCCACGGGCCGACCCG+GGG | + | tig0022216:41065-41084 | None:intergenic | 80.0% |
| ! | GGCATCCCACGGGCCGACCC+GGG | + | tig0022216:41066-41085 | None:intergenic | 80.0% |
| ! | CCTCCCGGCACTCCCCGGGT+CGG | - | tig0022216:41050-41069 | Msa1397910:CDS | 80.0% |
| ! | CACTCCCCGGGTCGGCCCGT+GGG | - | tig0022216:41058-41077 | Msa1397910:CDS | 80.0% |
| ! | GCATCCCACGGGCCGACCCG+GGG | + | tig0022216:41065-41084 | None:intergenic | 80.0% |
| ! | GGCATCCCACGGGCCGACCC+GGG | + | tig0022216:41066-41085 | None:intergenic | 80.0% |
| !!! | CCGACCCGGGGAGTGCCGGG+AGG | + | tig0022216:41053-41072 | None:intergenic | 85.0% |
| !!! | GGGCCGACCCGGGGAGTGCC+GGG | + | tig0022216:41056-41075 | None:intergenic | 85.0% |
| !! | CGGGCCGACCCGGGGAGTGC+CGG | + | tig0022216:41057-41076 | None:intergenic | 85.0% |
| ! | GCACTCCCCGGGTCGGCCCG+TGG | - | tig0022216:41057-41076 | Msa1397910:CDS | 85.0% |
| !!! | CCGACCCGGGGAGTGCCGGG+AGG | + | tig0022216:41053-41072 | None:intergenic | 85.0% |
| !!! | GGGCCGACCCGGGGAGTGCC+GGG | + | tig0022216:41056-41075 | None:intergenic | 85.0% |
| !! | CGGGCCGACCCGGGGAGTGC+CGG | + | tig0022216:41057-41076 | None:intergenic | 85.0% |
| ! | GCACTCCCCGGGTCGGCCCG+TGG | - | tig0022216:41057-41076 | Msa1397910:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022216 | gene | 40951 | 42075 | 40951 | ID=Msa1397910;Name=Msa1397910 |
| tig0022216 | mRNA | 40951 | 42075 | 40951 | ID=Msa1397910-mRNA-1;Parent=Msa1397910;Name=Msa1397910-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|374 |
| tig0022216 | exon | 40951 | 42075 | 40951 | ID=Msa1397910-mRNA-1:exon:16349;Parent=Msa1397910-mRNA-1 |
| tig0022216 | CDS | 40951 | 42075 | 40951 | ID=Msa1397910-mRNA-1:cds;Parent=Msa1397910-mRNA-1 |
| Gene Sequence |
| Protein sequence |