Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389420 | GAU12040.1 | 72.093 | 258 | 37 | 7 | 1 | 225 | 1 | 256 | 4.55e-97 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389420 | sp|Q8RWD5|SCD2_ARATH | 42.606 | 284 | 101 | 9 | 1 | 225 | 1 | 281 | 2.02e-36 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389420 | A0A1S2Y1V7 | 68.872 | 257 | 37 | 10 | 1 | 225 | 1 | 246 | 1.63e-84 | 270 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1389420 | Msa1391340 | 0.928462 | 2.792664e-92 | -8.615850e-47 |
| Msa1389420 | Msa1447500 | 0.820795 | 5.680102e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389420 | MtrunA17_Chr3g0131741 | 46.071 | 280 | 89 | 10 | 1 | 225 | 1 | 273 | 6.59e-39 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389420 | AT5G13260.1 | 44.981 | 269 | 92 | 8 | 1 | 225 | 1 | 257 | 3.74e-41 | 147 |
| Msa1389420 | AT3G48860.1 | 42.606 | 284 | 101 | 9 | 1 | 225 | 1 | 281 | 7.61e-38 | 137 |
| Msa1389420 | AT3G48860.2 | 42.606 | 284 | 101 | 9 | 1 | 225 | 1 | 281 | 2.05e-37 | 137 |
| Msa1389420 | AT5G23700.2 | 43.243 | 259 | 109 | 8 | 1 | 225 | 1 | 255 | 4.64e-37 | 136 |
| Msa1389420 | AT5G23700.3 | 43.243 | 259 | 109 | 8 | 1 | 225 | 1 | 255 | 5.32e-37 | 136 |
| Msa1389420 | AT5G23700.1 | 43.243 | 259 | 109 | 8 | 1 | 225 | 1 | 255 | 5.95e-37 | 136 |
| Msa1389420 | AT3G48860.3 | 50.000 | 118 | 33 | 3 | 131 | 225 | 13 | 127 | 3.12e-24 | 99.8 |
| Msa1389420 | AT4G08630.2 | 38.983 | 118 | 46 | 3 | 134 | 225 | 390 | 507 | 9.57e-15 | 73.2 |
| Msa1389420 | AT4G08630.1 | 38.655 | 119 | 46 | 4 | 134 | 225 | 390 | 508 | 3.44e-13 | 68.6 |
| Msa1389420 | AT4G25070.2 | 52.778 | 72 | 13 | 1 | 175 | 225 | 401 | 472 | 1.58e-12 | 66.6 |
| Msa1389420 | AT4G25070.1 | 52.778 | 72 | 13 | 1 | 175 | 225 | 399 | 470 | 1.77e-12 | 66.6 |
Find 69 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGGAATTTCAACCATTAAA+AGG | 0.212578 | tig0021283:-8446 | Msa1389420:CDS |
| CCTTGGAGAAGGAGCATCTT+TGG | 0.246185 | tig0021283:-4833 | Msa1389420:CDS |
| TTCTAAAATGCCTCTTTATT+CGG | 0.276176 | tig0021283:+8595 | None:intergenic |
| CGGTTGTCTCCTAAATCTTT+TGG | 0.277252 | tig0021283:+7850 | None:intergenic |
| CTTGTTCAACCAAAAGATTT+AGG | 0.308911 | tig0021283:-7859 | Msa1389420:CDS |
| ATACTAAGCCCAAAGATAAA+AGG | 0.330441 | tig0021283:-8011 | Msa1389420:intron |
| ATGAGTAGTGGCGGACTTCC+TGG | 0.330661 | tig0021283:+8284 | None:intergenic |
| GAGGCGTTGAGCAGCAGCTT+TGG | 0.391765 | tig0021283:+8407 | None:intergenic |
| CATCTTCATTGTCGGCAACC+TGG | 0.410466 | tig0021283:+8367 | None:intergenic |
| AGTTTGTAGGTTGCTTCCCT+TGG | 0.418586 | tig0021283:-4850 | Msa1389420:intron |
| CTCCACTGCCGGATCGAAAC+CGG | 0.418764 | tig0021283:+8528 | None:intergenic |
| GAACAGTAGCTGGGGTCCTC+TGG | 0.420844 | tig0021283:+8058 | None:intergenic |
| GAAGATGACGACGACGATCT+AGG | 0.423022 | tig0021283:-8342 | Msa1389420:CDS |
| TTATGAATGGGAGGGTCTAT+TGG | 0.427689 | tig0021283:+8033 | None:intergenic |
| ATCTTCGTCATCTTCATTGT+CGG | 0.428359 | tig0021283:+8359 | None:intergenic |
| ACATACATTGGTTCGTCTAC+AGG | 0.428715 | tig0021283:+8138 | None:intergenic |
| CCTGCAGGTCGATGTGCTTA+GGG | 0.438550 | tig0021283:-7658 | Msa1389420:intron |
| ATCTTCATTGTCGGCAACCT+GGG | 0.449451 | tig0021283:+8368 | None:intergenic |
| TTTGGGCTTAGTATTATGAA+TGG | 0.461092 | tig0021283:+8020 | None:intergenic |
| CGGCAGTGGAGTAGTGAATC+GGG | 0.468209 | tig0021283:-8516 | Msa1389420:CDS |
| TACAGATTTCTGTTTGATAC+CGG | 0.479012 | tig0021283:-7883 | Msa1389420:intron |
| TAGGTTGCTTCCCTTGGAGA+AGG | 0.481095 | tig0021283:-4844 | Msa1389420:CDS |
| GCGAAGAGGAACAGAGAGTC+CGG | 0.488553 | tig0021283:-8547 | Msa1389420:CDS |
| ATGAGCGAGCATGTCGTGAT+GGG | 0.489990 | tig0021283:+8478 | None:intergenic |
| TCTATTGGCAGAACAGTAGC+TGG | 0.490802 | tig0021283:+8048 | None:intergenic |
| TTGGGCTTAGTATTATGAAT+GGG | 0.490989 | tig0021283:+8021 | None:intergenic |
| CGCACAAGTAATGGCTTCCC+AGG | 0.495004 | tig0021283:-8385 | Msa1389420:CDS |
| GATGAGCGAGCATGTCGTGA+TGG | 0.500435 | tig0021283:+8477 | None:intergenic |
| CCGGCAGTGGAGTAGTGAAT+CGG | 0.502248 | tig0021283:-8517 | Msa1389420:CDS |
| CTGGTGAGAGTGAGAGGCGG+AGG | 0.510318 | tig0021283:+8303 | None:intergenic |
| CAGAGAGTCCGGTTTCGATC+CGG | 0.512049 | tig0021283:-8536 | Msa1389420:CDS |
| AATGTATGTTAATGTTCGTC+CGG | 0.515298 | tig0021283:-8124 | Msa1389420:CDS |
| GGACGAACATTAACATACAT+TGG | 0.515306 | tig0021283:+8126 | None:intergenic |
| CTCCGCCTCTCACTCTCACC+AGG | 0.517105 | tig0021283:-8302 | Msa1389420:CDS |
| GACTTCCTGGTGAGAGTGAG+AGG | 0.525644 | tig0021283:+8297 | None:intergenic |
| TGGAAGCTAAACTCTTGAGC+AGG | 0.525811 | tig0021283:-4813 | Msa1389420:intron |
| GTCCGGTTTCGATCCGGCAG+TGG | 0.534140 | tig0021283:-8530 | Msa1389420:CDS |
| GGGGTCCTCTGGTTCAGCGG+TGG | 0.534663 | tig0021283:+8069 | None:intergenic |
| CCGATTCACTACTCCACTGC+CGG | 0.534900 | tig0021283:+8517 | None:intergenic |
| AATGGTTGAAATTCCGGTGA+GGG | 0.536408 | tig0021283:+8452 | None:intergenic |
| GGCTTAGTATTATGAATGGG+AGG | 0.544073 | tig0021283:+8024 | None:intergenic |
| TCAACGCCTCGCACAAGTAA+TGG | 0.544627 | tig0021283:-8394 | Msa1389420:CDS |
| CCAAAGATGCTCCTTCTCCA+AGG | 0.561548 | tig0021283:+4833 | None:intergenic |
| AAGAATCTGACCGCATGAGA+AGG | 0.561668 | tig0021283:+8249 | None:intergenic |
| CACGAAGAGTTGAGGCCTCA+CGG | 0.563314 | tig0021283:+7830 | None:intergenic |
| TTATTATTAGGTGCTACTGC+CGG | 0.567252 | tig0021283:+8105 | None:intergenic |
| CTATTGGCAGAACAGTAGCT+GGG | 0.569525 | tig0021283:+8049 | None:intergenic |
| GGCAGCATTGCGTCAAAGAG+AGG | 0.571935 | tig0021283:-4703 | None:intergenic |
| CTTATTAAATTACAGAAAGG+AGG | 0.573084 | tig0021283:-4724 | Msa1389420:intron |
| GGCCTCAACTCTTCGTGACG+AGG | 0.575243 | tig0021283:-7824 | Msa1389420:intron |
| CAAAGATGCTCCTTCTCCAA+GGG | 0.581056 | tig0021283:+4834 | None:intergenic |
| GCTCGCTCATCTTCCCTCAC+CGG | 0.586627 | tig0021283:-8465 | Msa1389420:CDS |
| GCTGGGGTCCTCTGGTTCAG+CGG | 0.597931 | tig0021283:+8066 | None:intergenic |
| AACCTCGTCACGAAGAGTTG+AGG | 0.621673 | tig0021283:+7822 | None:intergenic |
| ATAAACCACCGCTGAACCAG+AGG | 0.629645 | tig0021283:-8074 | Msa1389420:CDS |
| GCTTAGTATTATGAATGGGA+GGG | 0.630118 | tig0021283:+8025 | None:intergenic |
| GTAATGAGCACCGAATAAAG+AGG | 0.642553 | tig0021283:-8605 | Msa1389420:five_prime_UTR |
| TGAGCGAGCATGTCGTGATG+GGG | 0.648303 | tig0021283:+8479 | None:intergenic |
| TAATGGTTGAAATTCCGGTG+AGG | 0.658752 | tig0021283:+8451 | None:intergenic |
| ACATTGGTTCGTCTACAGGA+AGG | 0.661173 | tig0021283:+8142 | None:intergenic |
| TCTGTGAGTATGAGTAGTGG+CGG | 0.662883 | tig0021283:+8275 | None:intergenic |
| TTCCTGGTGAGAGTGAGAGG+CGG | 0.662914 | tig0021283:+8300 | None:intergenic |
| GGGAAGCCATTACTTGTGCG+AGG | 0.664261 | tig0021283:+8388 | None:intergenic |
| TATTGGCAGAACAGTAGCTG+GGG | 0.670400 | tig0021283:+8050 | None:intergenic |
| TGTTAGAAGATGGAGCGAAG+AGG | 0.671932 | tig0021283:-8561 | Msa1389420:exon |
| AGATCTGTGAGTATGAGTAG+TGG | 0.677373 | tig0021283:+8272 | None:intergenic |
| TCACAGATCTCCTTCTCATG+CGG | 0.680149 | tig0021283:-8259 | Msa1389420:intron |
| GGCAGTGGAGTAGTGAATCG+GGG | 0.681345 | tig0021283:-8515 | Msa1389420:CDS |
| AGATTTAGGAGACAACCGTG+AGG | 0.804602 | tig0021283:-7845 | Msa1389420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATTATTATTATTATT+AGG | + | tig0021283:5256-5275 | None:intergenic | 0.0% |
| !!! | TTTTTAGAAAAAATAGATTT+TGG | - | tig0021283:6076-6095 | Msa1389420:intron | 10.0% |
| !!! | AAAAAAATAAAGTGATTTTT+TGG | + | tig0021283:6445-6464 | None:intergenic | 10.0% |
| !!! | AACAAAATAGATTTTTTAAA+AGG | + | tig0021283:6934-6953 | None:intergenic | 10.0% |
| !! | TATTAGAAGAAAAAAAAAAT+TGG | + | tig0021283:6993-7012 | None:intergenic | 10.0% |
| !!! | TGGATTTTTTAAAAAAAAAA+AGG | + | tig0021283:7158-7177 | None:intergenic | 10.0% |
| !! | TGTCTAAAAAAAAAAATAAT+TGG | + | tig0021283:7260-7279 | None:intergenic | 10.0% |
| !!! | TTTTTTTGTATTTAATACAT+TGG | - | tig0021283:7840-7859 | Msa1389420:CDS | 10.0% |
| !!! | TCATTTTTAAGTATTTGTTT+AGG | - | tig0021283:6154-6173 | Msa1389420:intron | 15.0% |
| !!! | TTTTTTTTTCAAAAACAAAG+AGG | - | tig0021283:6262-6281 | Msa1389420:intron | 15.0% |
| !!! | TTTGTTTCAGATTTTTAAAA+AGG | - | tig0021283:6478-6497 | Msa1389420:intron | 15.0% |
| !!! | TTGTTTCAGATTTTTAAAAA+GGG | - | tig0021283:6479-6498 | Msa1389420:intron | 15.0% |
| !!! | TTTTTAAAAGGAAAATTCTA+TGG | + | tig0021283:6922-6941 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTTCTAATAACA+AGG | - | tig0021283:6996-7015 | Msa1389420:intron | 15.0% |
| !! | TTTAAAAAATCCAAAACAAA+CGG | - | tig0021283:7165-7184 | Msa1389420:intron | 15.0% |
| !! | TTAACTAAATACTAGTAAAT+AGG | + | tig0021283:7303-7322 | None:intergenic | 15.0% |
| !! | TTTACTAGTATTTAGTTAAA+AGG | - | tig0021283:7304-7323 | Msa1389420:intron | 15.0% |
| !! | TTACTAGTATTTAGTTAAAA+GGG | - | tig0021283:7305-7324 | Msa1389420:intron | 15.0% |
| !!! | ACTAATTTTATGATTTAACT+CGG | + | tig0021283:7606-7625 | None:intergenic | 15.0% |
| !! | TCATAAAAACTTACAATTTA+AGG | + | tig0021283:7818-7837 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTCTAGTTGTTTA+GGG | + | tig0021283:8313-8332 | None:intergenic | 15.0% |
| !! | TTCTGTAATTTAATAAGATT+GGG | + | tig0021283:8619-8638 | None:intergenic | 15.0% |
| !! | TTTCTGTAATTTAATAAGAT+TGG | + | tig0021283:8620-8639 | None:intergenic | 15.0% |
| !! | AATCTTATTAAATTACAGAA+AGG | - | tig0021283:8619-8638 | Msa1389420:five_prime_UTR | 15.0% |
| !! | TTAGTTAGTGATAAATGAAT+GGG | + | tig0021283:5141-5160 | None:intergenic | 20.0% |
| !! | ATTAGTTAGTGATAAATGAA+TGG | + | tig0021283:5142-5161 | None:intergenic | 20.0% |
| !!! | CTTTTATGATAGTAAACAAA+TGG | + | tig0021283:6013-6032 | None:intergenic | 20.0% |
| !! | AAAAAAAATCCCAAACAAAT+GGG | + | tig0021283:6420-6439 | None:intergenic | 20.0% |
| !! | AAAAAAAAATCCCAAACAAA+TGG | + | tig0021283:6421-6440 | None:intergenic | 20.0% |
| !!! | TGTTTCAGATTTTTAAAAAG+GGG | - | tig0021283:6480-6499 | Msa1389420:intron | 20.0% |
| !!! | TACATGTACTATTTTATCAT+TGG | - | tig0021283:6650-6669 | Msa1389420:intron | 20.0% |
| !!! | AATCTCTTTTATTGTTTTAG+TGG | + | tig0021283:7118-7137 | None:intergenic | 20.0% |
| !! | TTAAAAAATCCAAAACAAAC+GGG | - | tig0021283:7166-7185 | Msa1389420:intron | 20.0% |
| !! | TCTTTAAATATGTGAAAAAC+TGG | + | tig0021283:7664-7683 | None:intergenic | 20.0% |
| !! | TTTAAATAGGATGACATATA+AGG | - | tig0021283:7702-7721 | Msa1389420:intron | 20.0% |
| !! | ATCTCAAAATAGAACTTAAT+AGG | - | tig0021283:7754-7773 | Msa1389420:intron | 20.0% |
| !! | TCTCAAAATAGAACTTAATA+GGG | - | tig0021283:7755-7774 | Msa1389420:intron | 20.0% |
| !!! | TAGGTCTTTTATTTTCAAAA+GGG | + | tig0021283:7949-7968 | None:intergenic | 20.0% |
| !!! | ATAGGTCTTTTATTTTCAAA+AGG | + | tig0021283:7950-7969 | None:intergenic | 20.0% |
| !!! | GATTTTTTTTCTAGTTGTTT+AGG | + | tig0021283:8314-8333 | None:intergenic | 20.0% |
| !!! | GAAGTATTTAATTGATTAGA+GGG | + | tig0021283:8354-8373 | None:intergenic | 20.0% |
| !!! | AGAAGTATTTAATTGATTAG+AGG | + | tig0021283:8355-8374 | None:intergenic | 20.0% |
| !!! | TTCTAAAATGCCTCTTTATT+CGG | + | tig0021283:4754-4773 | None:intergenic | 25.0% |
| !!! | AATAAAGAGGCATTTTAGAA+AGG | - | tig0021283:4754-4773 | Msa1389420:intron | 25.0% |
| !!! | ATAAAGAGGCATTTTAGAAA+GGG | - | tig0021283:4755-4774 | Msa1389420:intron | 25.0% |
| ! | TAGTTAGTGATAAATGAATG+GGG | + | tig0021283:5140-5159 | None:intergenic | 25.0% |
| ! | GAAAGATTATTCATTTGTGA+AGG | + | tig0021283:5426-5445 | None:intergenic | 25.0% |
| !!! | GAATGAAAGTATTTTTGACA+AGG | - | tig0021283:5715-5734 | Msa1389420:intron | 25.0% |
| ! | TGTTTCTTTATCATTAGCTA+TGG | - | tig0021283:5899-5918 | Msa1389420:intron | 25.0% |
| ! | GTTTCTTTATCATTAGCTAT+GGG | - | tig0021283:5900-5919 | Msa1389420:intron | 25.0% |
| !! | CCTAATAGCTTTTCATTTTA+TGG | + | tig0021283:6220-6239 | None:intergenic | 25.0% |
| ! | CCATAAAATGAAAAGCTATT+AGG | - | tig0021283:6217-6236 | Msa1389420:intron | 25.0% |
| !! | AAAAATAATTGGCCTGATTT+GGG | + | tig0021283:7249-7268 | None:intergenic | 25.0% |
| !! | AAAAAATAATTGGCCTGATT+TGG | + | tig0021283:7250-7269 | None:intergenic | 25.0% |
| !!! | AAACACCAAAAAAGTATTCT+TGG | - | tig0021283:7337-7356 | Msa1389420:intron | 25.0% |
| !!! | AAGTTTGTTTTGTAACAGAT+AGG | + | tig0021283:7487-7506 | None:intergenic | 25.0% |
| ! | CTGTTACAAAACAAACTTAA+AGG | - | tig0021283:7489-7508 | Msa1389420:intron | 25.0% |
| ! | TACAAGCTACAATATTGTAA+GGG | + | tig0021283:8017-8036 | None:intergenic | 25.0% |
| ! | ACTAGAAAAAAAATCATGCT+TGG | - | tig0021283:8319-8338 | Msa1389420:CDS | 25.0% |
| ! | CTAGAAAAAAAATCATGCTT+GGG | - | tig0021283:8320-8339 | Msa1389420:CDS | 25.0% |
| ! | CTTATTAAATTACAGAAAGG+AGG | - | tig0021283:8622-8641 | Msa1389420:five_prime_UTR | 25.0% |
| !!! | TAAAGAGGCATTTTAGAAAG+GGG | - | tig0021283:4756-4775 | Msa1389420:intron | 30.0% |
| ! | CCTTTTAATGGTTGAAATTC+CGG | + | tig0021283:4903-4922 | None:intergenic | 30.0% |
| ! | AACATTCTGAGTCCTTTTAA+TGG | + | tig0021283:4915-4934 | None:intergenic | 30.0% |
| TGATTAGAAAAAGGTGAATG+AGG | + | tig0021283:5172-5191 | None:intergenic | 30.0% | |
| ! | CTTTTTCTAATCAGTTAGCT+CGG | - | tig0021283:5179-5198 | Msa1389420:intron | 30.0% |
| AATGTATGTTAATGTTCGTC+CGG | - | tig0021283:5222-5241 | Msa1389420:intron | 30.0% | |
| TTGGGCTTAGTATTATGAAT+GGG | + | tig0021283:5328-5347 | None:intergenic | 30.0% | |
| TTTGGGCTTAGTATTATGAA+TGG | + | tig0021283:5329-5348 | None:intergenic | 30.0% | |
| ATACTAAGCCCAAAGATAAA+AGG | - | tig0021283:5335-5354 | Msa1389420:intron | 30.0% | |
| ! | TTGGTTCACCTTTTATCTTT+GGG | + | tig0021283:5346-5365 | None:intergenic | 30.0% |
| GATTATTCATTTGTGAAGGA+TGG | + | tig0021283:5422-5441 | None:intergenic | 30.0% | |
| TACAGATTTCTGTTTGATAC+CGG | - | tig0021283:5463-5482 | Msa1389420:intron | 30.0% | |
| CTTGTTCAACCAAAAGATTT+AGG | - | tig0021283:5487-5506 | Msa1389420:intron | 30.0% | |
| GGAGCAATAGTATATGTATA+TGG | + | tig0021283:5643-5662 | None:intergenic | 30.0% | |
| !!! | TGTTTTGGGTTAGTTTAGAA+GGG | + | tig0021283:5664-5683 | None:intergenic | 30.0% |
| !!! | TTGTTTTGGGTTAGTTTAGA+AGG | + | tig0021283:5665-5684 | None:intergenic | 30.0% |
| TATCATTAGCTATGGGAATA+TGG | - | tig0021283:5907-5926 | Msa1389420:intron | 30.0% | |
| ATCATTAGCTATGGGAATAT+GGG | - | tig0021283:5908-5927 | Msa1389420:intron | 30.0% | |
| !! | TAGATTTTGGAAAAGCAACT+AGG | - | tig0021283:6089-6108 | Msa1389420:intron | 30.0% |
| !! | AGATTTTGGAAAAGCAACTA+GGG | - | tig0021283:6090-6109 | Msa1389420:intron | 30.0% |
| TCTTAAGTGTTACACTTTGT+GGG | - | tig0021283:6715-6734 | Msa1389420:intron | 30.0% | |
| ! | GATGAATTGATGATACTATG+AGG | - | tig0021283:6795-6814 | Msa1389420:intron | 30.0% |
| ! | AGTCATTAGAATGACTTTTC+TGG | + | tig0021283:6896-6915 | None:intergenic | 30.0% |
| TCTTCTAATAACAAGGAACA+AGG | - | tig0021283:7003-7022 | Msa1389420:intron | 30.0% | |
| ! | AAAATAATTGGCCTGATTTG+GGG | + | tig0021283:7248-7267 | None:intergenic | 30.0% |
| GTTTGACGTTTGTAACATAT+AGG | + | tig0021283:7516-7535 | None:intergenic | 30.0% | |
| GTTACAAACGTCAAACTTAA+AGG | - | tig0021283:7520-7539 | Msa1389420:intron | 30.0% | |
| AAATATGTGAAAAACTGGTG+CGG | + | tig0021283:7659-7678 | None:intergenic | 30.0% | |
| ! | GGTCAAGGTTTTTCATAAAT+AGG | + | tig0021283:7968-7987 | None:intergenic | 30.0% |
| ACAATATTGTAAGGGGAATA+GGG | + | tig0021283:8009-8028 | None:intergenic | 30.0% | |
| TACAATATTGTAAGGGGAAT+AGG | + | tig0021283:8010-8029 | None:intergenic | 30.0% | |
| ACAAGCTACAATATTGTAAG+GGG | + | tig0021283:8016-8035 | None:intergenic | 30.0% | |
| CTACAAGCTACAATATTGTA+AGG | + | tig0021283:8018-8037 | None:intergenic | 30.0% | |
| ! | TATGATTGTCTCCTTGTTAT+TGG | - | tig0021283:8045-8064 | Msa1389420:CDS | 30.0% |
| !! | ATGATTGTCTCCTTGTTATT+GGG | - | tig0021283:8046-8065 | Msa1389420:CDS | 30.0% |
| TCTAGGTAAATGAAACTAGA+AGG | + | tig0021283:8159-8178 | None:intergenic | 30.0% | |
| GTATTTAATTGATTAGAGGG+AGG | + | tig0021283:8351-8370 | None:intergenic | 30.0% | |
| AGACTTAAGAGAAAATTCAC+TGG | + | tig0021283:8442-8461 | None:intergenic | 30.0% | |
| AAAGTTAAACCTGTTGCATA+TGG | - | tig0021283:8566-8585 | Msa1389420:exon | 30.0% | |
| TTCATAAATCTACCAAGTGA+AGG | + | tig0021283:8596-8615 | None:intergenic | 30.0% | |
| !!! | AAAGAGGCATTTTAGAAAGG+GGG | - | tig0021283:4757-4776 | Msa1389420:intron | 35.0% |
| CCGGAATTTCAACCATTAAA+AGG | - | tig0021283:4900-4919 | Msa1389420:intron | 35.0% | |
| ATCTTCGTCATCTTCATTGT+CGG | + | tig0021283:4990-5009 | None:intergenic | 35.0% | |
| GATAAATGAATGGGGTTAAG+TGG | + | tig0021283:5132-5151 | None:intergenic | 35.0% | |
| CGAGCTAACTGATTAGAAAA+AGG | + | tig0021283:5181-5200 | None:intergenic | 35.0% | |
| GGACGAACATTAACATACAT+TGG | + | tig0021283:5223-5242 | None:intergenic | 35.0% | |
| !! | TTATTATTAGGTGCTACTGC+CGG | + | tig0021283:5244-5263 | None:intergenic | 35.0% |
| GCTTAGTATTATGAATGGGA+GGG | + | tig0021283:5324-5343 | None:intergenic | 35.0% | |
| !! | GTTGGTTCACCTTTTATCTT+TGG | + | tig0021283:5347-5366 | None:intergenic | 35.0% |
| AAAGAGAATGAGCAGATAGT+TGG | + | tig0021283:5365-5384 | None:intergenic | 35.0% | |
| TAATGTGAGAATGAGCAGTT+AGG | + | tig0021283:5399-5418 | None:intergenic | 35.0% | |
| !! | ATCTTTTGGTTGAACAAGTC+CGG | + | tig0021283:5485-5504 | None:intergenic | 35.0% |
| TTTAAAAAGGGGAGCTTCTA+CGG | - | tig0021283:6491-6510 | Msa1389420:intron | 35.0% | |
| GTCTTAAGTGTTACACTTTG+TGG | - | tig0021283:6714-6733 | Msa1389420:intron | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | - | tig0021283:6716-6735 | Msa1389420:intron | 35.0% | |
| TGTTACGCTTAAAACAAGGT+AGG | - | tig0021283:6739-6758 | Msa1389420:intron | 35.0% | |
| TGATGTCATTGTACAAACAG+TGG | - | tig0021283:6828-6847 | Msa1389420:intron | 35.0% | |
| GATGTCATTGTACAAACAGT+GGG | - | tig0021283:6829-6848 | Msa1389420:intron | 35.0% | |
| ATGTCATTGTACAAACAGTG+GGG | - | tig0021283:6830-6849 | Msa1389420:intron | 35.0% | |
| !!! | GTTTTGAAGCTCTTACATCT+GGG | + | tig0021283:7031-7050 | None:intergenic | 35.0% |
| !!! | AGTTTTGAAGCTCTTACATC+TGG | + | tig0021283:7032-7051 | None:intergenic | 35.0% |
| TGTTGTTCAGCCAAATTGTT+CGG | + | tig0021283:7200-7219 | None:intergenic | 35.0% | |
| AACAATTTGGCTGAACAACA+AGG | - | tig0021283:7200-7219 | Msa1389420:intron | 35.0% | |
| ACAATTTGGCTGAACAACAA+GGG | - | tig0021283:7201-7220 | Msa1389420:intron | 35.0% | |
| !!! | GTAGGCCAAGAATACTTTTT+TGG | + | tig0021283:7345-7364 | None:intergenic | 35.0% |
| ! | CATCTCCTTTACCCTTTTAA+AGG | + | tig0021283:7373-7392 | None:intergenic | 35.0% |
| !!! | ACGTCAGCGTATTTTTTTGA+CGG | - | tig0021283:7414-7433 | Msa1389420:intron | 35.0% |
| ! | TTTGACGGTTAGTTAACAGA+AGG | - | tig0021283:7429-7448 | Msa1389420:intron | 35.0% |
| GCACACTGTTACAAAGTTAA+AGG | - | tig0021283:7460-7479 | Msa1389420:intron | 35.0% | |
| ! | ATTTGGCTTAATTACACCAC+AGG | + | tig0021283:7547-7566 | None:intergenic | 35.0% |
| GCTAGTATGCTTAAAAGAAC+TGG | + | tig0021283:7636-7655 | None:intergenic | 35.0% | |
| AATATGTGAAAAACTGGTGC+GGG | + | tig0021283:7658-7677 | None:intergenic | 35.0% | |
| TATTGTCTCACCCAATAACA+AGG | + | tig0021283:8059-8078 | None:intergenic | 35.0% | |
| TCATTTACCTAGAGATAGAC+TGG | - | tig0021283:8166-8185 | Msa1389420:intron | 35.0% | |
| CATTTACCTAGAGATAGACT+GGG | - | tig0021283:8167-8186 | Msa1389420:intron | 35.0% | |
| AGATAGACTGGGTTGTATTT+AGG | - | tig0021283:8178-8197 | Msa1389420:intron | 35.0% | |
| ! | CTAGTTGTTTAGGGTACAAT+AGG | + | tig0021283:8304-8323 | None:intergenic | 35.0% |
| TTCTTTCCATCCAAGTTTGT+AGG | - | tig0021283:8483-8502 | Msa1389420:CDS | 35.0% | |
| !! | GTAATGAGCACCGAATAAAG+AGG | - | tig0021283:4741-4760 | Msa1389420:intron | 40.0% |
| AATGGTTGAAATTCCGGTGA+GGG | + | tig0021283:4897-4916 | None:intergenic | 40.0% | |
| TAATGGTTGAAATTCCGGTG+AGG | + | tig0021283:4898-4917 | None:intergenic | 40.0% | |
| AGATCTGTGAGTATGAGTAG+TGG | + | tig0021283:5077-5096 | None:intergenic | 40.0% | |
| TGAATGGGGTTAAGTGGAAA+GGG | + | tig0021283:5126-5145 | None:intergenic | 40.0% | |
| ATGAATGGGGTTAAGTGGAA+AGG | + | tig0021283:5127-5146 | None:intergenic | 40.0% | |
| !! | ACATACATTGGTTCGTCTAC+AGG | + | tig0021283:5211-5230 | None:intergenic | 40.0% |
| TTATGAATGGGAGGGTCTAT+TGG | + | tig0021283:5316-5335 | None:intergenic | 40.0% | |
| GGCTTAGTATTATGAATGGG+AGG | + | tig0021283:5325-5344 | None:intergenic | 40.0% | |
| ! | CGGTTGTCTCCTAAATCTTT+TGG | + | tig0021283:5499-5518 | None:intergenic | 40.0% |
| TGTGTGTGTGTTAAGTCTAG+TGG | - | tig0021283:5613-5632 | Msa1389420:intron | 40.0% | |
| AAACGTACAGCTTAGACTTG+AGG | - | tig0021283:5816-5835 | Msa1389420:intron | 40.0% | |
| TACAGCTTAGACTTGAGGAA+GGG | - | tig0021283:5821-5840 | Msa1389420:intron | 40.0% | |
| ! | GAATATGGGTGCGTTTGTTT+TGG | - | tig0021283:5922-5941 | Msa1389420:intron | 40.0% |
| AACAAACACACCCTAGGAAT+AGG | - | tig0021283:6394-6413 | Msa1389420:intron | 40.0% | |
| AACAAATGGGCCTATTCCTA+GGG | + | tig0021283:6407-6426 | None:intergenic | 40.0% | |
| AAACAAATGGGCCTATTCCT+AGG | + | tig0021283:6408-6427 | None:intergenic | 40.0% | |
| TAGGAATAGGCCCATTTGTT+TGG | - | tig0021283:6407-6426 | Msa1389420:intron | 40.0% | |
| AGGAATAGGCCCATTTGTTT+GGG | - | tig0021283:6408-6427 | Msa1389420:intron | 40.0% | |
| TAGTAATGCTTGCGACATCT+TGG | - | tig0021283:6625-6644 | Msa1389420:intron | 40.0% | |
| !! | AAAAGTATTCTTGGCCTACC+AGG | - | tig0021283:7346-7365 | Msa1389420:intron | 40.0% |
| !! | CTTTACCCTTTTAAAGGACC+TGG | + | tig0021283:7367-7386 | None:intergenic | 40.0% |
| ! | CAGGTCCTTTAAAAGGGTAA+AGG | - | tig0021283:7365-7384 | Msa1389420:intron | 40.0% |
| GTCAAAAAAATACGCTGACG+TGG | + | tig0021283:7415-7434 | None:intergenic | 40.0% | |
| CAACTACAAGACACTCTTTC+TGG | + | tig0021283:7914-7933 | None:intergenic | 40.0% | |
| AATAGGGATAGGAATGGGAT+GGG | + | tig0021283:7993-8012 | None:intergenic | 40.0% | |
| ATTGTAAGGGGAATAGGGAT+AGG | + | tig0021283:8004-8023 | None:intergenic | 40.0% | |
| ATACAACCCAGTCTATCTCT+AGG | + | tig0021283:8176-8195 | None:intergenic | 40.0% | |
| ATGCTAGAGAATGTAACTCC+TGG | - | tig0021283:8231-8250 | Msa1389420:intron | 40.0% | |
| TAGGCAGTAATCATTGAACC+AGG | + | tig0021283:8252-8271 | None:intergenic | 40.0% | |
| ATGATTACTGCCTATGCCAT+TGG | - | tig0021283:8258-8277 | Msa1389420:intron | 40.0% | |
| AACTCAAACTCCTAGTCCAA+TGG | + | tig0021283:8277-8296 | None:intergenic | 40.0% | |
| AAGCAACCTACAAACTTGGA+TGG | + | tig0021283:8492-8511 | None:intergenic | 40.0% | |
| GAAGGAAAACCATATGCAAC+AGG | + | tig0021283:8578-8597 | None:intergenic | 40.0% | |
| ! | GCATATGGTTTTCCTTCACT+TGG | - | tig0021283:8581-8600 | Msa1389420:five_prime_UTR | 40.0% |
| GGGGGCAAATTGTTAGAAGA+TGG | - | tig0021283:4775-4794 | Msa1389420:intron | 45.0% | |
| TGTTAGAAGATGGAGCGAAG+AGG | - | tig0021283:4785-4804 | Msa1389420:intron | 45.0% | |
| ATCTTCATTGTCGGCAACCT+GGG | + | tig0021283:4981-5000 | None:intergenic | 45.0% | |
| TCTGTGAGTATGAGTAGTGG+CGG | + | tig0021283:5074-5093 | None:intergenic | 45.0% | |
| TCACAGATCTCCTTCTCATG+CGG | - | tig0021283:5087-5106 | Msa1389420:intron | 45.0% | |
| AAGAATCTGACCGCATGAGA+AGG | + | tig0021283:5100-5119 | None:intergenic | 45.0% | |
| AATGGGGTTAAGTGGAAAGG+GGG | + | tig0021283:5124-5143 | None:intergenic | 45.0% | |
| GAATGGGGTTAAGTGGAAAG+GGG | + | tig0021283:5125-5144 | None:intergenic | 45.0% | |
| !! | ACATTGGTTCGTCTACAGGA+AGG | + | tig0021283:5207-5226 | None:intergenic | 45.0% |
| TATTGGCAGAACAGTAGCTG+GGG | + | tig0021283:5299-5318 | None:intergenic | 45.0% | |
| CTATTGGCAGAACAGTAGCT+GGG | + | tig0021283:5300-5319 | None:intergenic | 45.0% | |
| TCTATTGGCAGAACAGTAGC+TGG | + | tig0021283:5301-5320 | None:intergenic | 45.0% | |
| AGATTTAGGAGACAACCGTG+AGG | - | tig0021283:5501-5520 | Msa1389420:intron | 45.0% | |
| GTGTGTGTTAAGTCTAGTGG+AGG | - | tig0021283:5616-5635 | Msa1389420:intron | 45.0% | |
| AACCCAAAACAAATCCCTGC+AGG | - | tig0021283:5673-5692 | Msa1389420:intron | 45.0% | |
| !! | GACCTGCAGGGATTTGTTTT+GGG | + | tig0021283:5678-5697 | None:intergenic | 45.0% |
| GTACAGCTTAGACTTGAGGA+AGG | - | tig0021283:5820-5839 | Msa1389420:intron | 45.0% | |
| AGCTGAAACAAACACACCCT+AGG | - | tig0021283:6388-6407 | Msa1389420:intron | 45.0% | |
| ! | GGGGTGTTACGCTTAAAACA+AGG | - | tig0021283:6735-6754 | Msa1389420:intron | 45.0% |
| TCCAAAACAAACGGGTCCTT+TGG | - | tig0021283:7174-7193 | Msa1389420:intron | 45.0% | |
| ! | GCCTACCAGGTCCTTTAAAA+GGG | - | tig0021283:7359-7378 | Msa1389420:intron | 45.0% |
| !! | ACCCTTTTAAAGGACCTGGT+AGG | + | tig0021283:7363-7382 | None:intergenic | 45.0% |
| CGTCAAACTTAAAGGACCTG+TGG | - | tig0021283:7528-7547 | Msa1389420:intron | 45.0% | |
| TCTTGCTAATGAGTGTCCCT+TGG | - | tig0021283:7778-7797 | Msa1389420:intron | 45.0% | |
| TGTCCCTTGGACACTCTTTA+AGG | - | tig0021283:7791-7810 | Msa1389420:intron | 45.0% | |
| !! | GGTCCTTAAAGAGTGTCCAA+GGG | + | tig0021283:7797-7816 | None:intergenic | 45.0% |
| !! | AGGTCCTTAAAGAGTGTCCA+AGG | + | tig0021283:7798-7817 | None:intergenic | 45.0% |
| GAATAGGGATAGGAATGGGA+TGG | + | tig0021283:7994-8013 | None:intergenic | 45.0% | |
| AGGGGAATAGGGATAGGAAT+GGG | + | tig0021283:7998-8017 | None:intergenic | 45.0% | |
| AAGGGGAATAGGGATAGGAA+TGG | + | tig0021283:7999-8018 | None:intergenic | 45.0% | |
| AACTCCTAGTCCAATGGCAT+AGG | + | tig0021283:8271-8290 | None:intergenic | 45.0% | |
| AGGGAAGCAACCTACAAACT+TGG | + | tig0021283:8496-8515 | None:intergenic | 45.0% | |
| AGTTTGTAGGTTGCTTCCCT+TGG | - | tig0021283:8496-8515 | Msa1389420:CDS | 45.0% | |
| CAAAGATGCTCCTTCTCCAA+GGG | + | tig0021283:8515-8534 | None:intergenic | 45.0% | |
| TGGAAGCTAAACTCTTGAGC+AGG | - | tig0021283:8533-8552 | Msa1389420:CDS | 45.0% | |
| !!! | TTTTTTTAAATGAATTTTTA+TGG | - | tig0021283:6310-6329 | Msa1389420:intron | 5.0% |
| !!! | TTTTTTAAATGAATTTTTAT+GGG | - | tig0021283:6311-6330 | Msa1389420:intron | 5.0% |
| !!! | TTTTTAAAAAATTAGATTTT+AGG | + | tig0021283:7082-7101 | None:intergenic | 5.0% |
| !! | AATAATAACAATAAAAAATT+TGG | + | tig0021283:7564-7583 | None:intergenic | 5.0% |
| !! | TTATAAAATAGAATTTAAAT+AGG | - | tig0021283:7689-7708 | Msa1389420:intron | 5.0% |
| ATGAGCGAGCATGTCGTGAT+GGG | + | tig0021283:4871-4890 | None:intergenic | 50.0% | |
| TCAACGCCTCGCACAAGTAA+TGG | - | tig0021283:4952-4971 | Msa1389420:intron | 50.0% | |
| CATCTTCATTGTCGGCAACC+TGG | + | tig0021283:4982-5001 | None:intergenic | 50.0% | |
| GAAGATGACGACGACGATCT+AGG | - | tig0021283:5004-5023 | Msa1389420:intron | 50.0% | |
| ATAAACCACCGCTGAACCAG+AGG | - | tig0021283:5272-5291 | Msa1389420:intron | 50.0% | |
| AACCTCGTCACGAAGAGTTG+AGG | + | tig0021283:5527-5546 | None:intergenic | 50.0% | |
| !! | CGACCTGCAGGGATTTGTTT+TGG | + | tig0021283:5679-5698 | None:intergenic | 50.0% |
| AGGGAGATGCAAAGAAGCTG+AGG | - | tig0021283:5840-5859 | Msa1389420:intron | 50.0% | |
| AAGAAGCTGAGGCCAGAGTT+AGG | - | tig0021283:5851-5870 | Msa1389420:intron | 50.0% | |
| AGAAGCTGAGGCCAGAGTTA+GGG | - | tig0021283:5852-5871 | Msa1389420:intron | 50.0% | |
| CTTCTCAAGCTCCCTAACTC+TGG | + | tig0021283:5866-5885 | None:intergenic | 50.0% | |
| AGTTAGGGAGCTTGAGAAGC+AGG | - | tig0021283:5867-5886 | Msa1389420:intron | 50.0% | |
| ! | GCCAAAGGACCCGTTTGTTT+TGG | + | tig0021283:7178-7197 | None:intergenic | 50.0% |
| GGTCCTTTGGCCGAACAATT+TGG | - | tig0021283:7187-7206 | Msa1389420:intron | 50.0% | |
| CAGCCAAATTGTTCGGCCAA+AGG | + | tig0021283:7193-7212 | None:intergenic | 50.0% | |
| TGGCTGAACAACAAGGGCTA+TGG | - | tig0021283:7207-7226 | Msa1389420:intron | 50.0% | |
| GGCCTACCAGGTCCTTTAAA+AGG | - | tig0021283:7358-7377 | Msa1389420:intron | 50.0% | |
| ACTGCCTATGCCATTGGACT+AGG | - | tig0021283:8264-8283 | Msa1389420:CDS | 50.0% | |
| TAGGTTGCTTCCCTTGGAGA+AGG | - | tig0021283:8502-8521 | Msa1389420:CDS | 50.0% | |
| CCAAAGATGCTCCTTCTCCA+AGG | + | tig0021283:8516-8535 | None:intergenic | 50.0% | |
| !! | CCTTGGAGAAGGAGCATCTT+TGG | - | tig0021283:8513-8532 | Msa1389420:CDS | 50.0% |
| GCGAAGAGGAACAGAGAGTC+CGG | - | tig0021283:4799-4818 | Msa1389420:intron | 55.0% | |
| CAGAGAGTCCGGTTTCGATC+CGG | - | tig0021283:4810-4829 | Msa1389420:intron | 55.0% | |
| CCGATTCACTACTCCACTGC+CGG | + | tig0021283:4832-4851 | None:intergenic | 55.0% | |
| CCGGCAGTGGAGTAGTGAAT+CGG | - | tig0021283:4829-4848 | Msa1389420:CDS | 55.0% | |
| CGGCAGTGGAGTAGTGAATC+GGG | - | tig0021283:4830-4849 | Msa1389420:CDS | 55.0% | |
| GGCAGTGGAGTAGTGAATCG+GGG | - | tig0021283:4831-4850 | Msa1389420:CDS | 55.0% | |
| TGAGCGAGCATGTCGTGATG+GGG | + | tig0021283:4870-4889 | None:intergenic | 55.0% | |
| GATGAGCGAGCATGTCGTGA+TGG | + | tig0021283:4872-4891 | None:intergenic | 55.0% | |
| GGGAAGCCATTACTTGTGCG+AGG | + | tig0021283:4961-4980 | None:intergenic | 55.0% | |
| CGCACAAGTAATGGCTTCCC+AGG | - | tig0021283:4961-4980 | Msa1389420:intron | 55.0% | |
| TTCCTGGTGAGAGTGAGAGG+CGG | + | tig0021283:5049-5068 | None:intergenic | 55.0% | |
| GACTTCCTGGTGAGAGTGAG+AGG | + | tig0021283:5052-5071 | None:intergenic | 55.0% | |
| !! | ATGAGTAGTGGCGGACTTCC+TGG | + | tig0021283:5065-5084 | None:intergenic | 55.0% |
| CACGAAGAGTTGAGGCCTCA+CGG | + | tig0021283:5519-5538 | None:intergenic | 55.0% | |
| CCTAAGCACATCGACCTGCA+GGG | + | tig0021283:5690-5709 | None:intergenic | 55.0% | |
| CCTGCAGGTCGATGTGCTTA+GGG | - | tig0021283:5688-5707 | Msa1389420:intron | 55.0% | |
| GAACAACAAGGGCTATGGCC+TGG | - | tig0021283:7212-7231 | Msa1389420:intron | 55.0% | |
| ! | ATTTGGGGCTCGTGTAGACC+AGG | + | tig0021283:7233-7252 | None:intergenic | 55.0% |
| GTCTACACGAGCCCCAAATC+AGG | - | tig0021283:7234-7253 | Msa1389420:intron | 55.0% | |
| CTCCACTGCCGGATCGAAAC+CGG | + | tig0021283:4821-4840 | None:intergenic | 60.0% | |
| GCTCGCTCATCTTCCCTCAC+CGG | - | tig0021283:4881-4900 | Msa1389420:intron | 60.0% | |
| !! | GAGGCGTTGAGCAGCAGCTT+TGG | + | tig0021283:4942-4961 | None:intergenic | 60.0% |
| GAACAGTAGCTGGGGTCCTC+TGG | + | tig0021283:5291-5310 | None:intergenic | 60.0% | |
| GGCCTCAACTCTTCGTGACG+AGG | - | tig0021283:5522-5541 | Msa1389420:intron | 60.0% | |
| CCCTGCAGGTCGATGTGCTT+AGG | - | tig0021283:5687-5706 | Msa1389420:intron | 60.0% | |
| CCCTAAGCACATCGACCTGC+AGG | + | tig0021283:5691-5710 | None:intergenic | 60.0% | |
| !! | GGAATGGGATGGGCTGGTCA+AGG | + | tig0021283:7983-8002 | None:intergenic | 60.0% |
| GGGATAGGAATGGGATGGGC+TGG | + | tig0021283:7989-8008 | None:intergenic | 60.0% | |
| GTCCGGTTTCGATCCGGCAG+TGG | - | tig0021283:4816-4835 | Msa1389420:CDS | 65.0% | |
| CTGGTGAGAGTGAGAGGCGG+AGG | + | tig0021283:5046-5065 | None:intergenic | 65.0% | |
| CTCCGCCTCTCACTCTCACC+AGG | - | tig0021283:5044-5063 | Msa1389420:intron | 65.0% | |
| ! | GCTGGGGTCCTCTGGTTCAG+CGG | + | tig0021283:5283-5302 | None:intergenic | 65.0% |
| ! | GGGGTCCTCTGGTTCAGCGG+TGG | + | tig0021283:5280-5299 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021283 | gene | 4704 | 8664 | 4704 | ID=Msa1389420;Name=Msa1389420 |
| tig0021283 | mRNA | 4704 | 8664 | 4704 | ID=Msa1389420-mRNA-1;Parent=Msa1389420;Name=Msa1389420-mRNA-1;_AED=0.14;_eAED=0.14;_QI=90|0.8|1|1|0.8|0.83|6|0|225 |
| tig0021283 | exon | 4704 | 4731 | 4704 | ID=Msa1389420-mRNA-1:exon:11654;Parent=Msa1389420-mRNA-1 |
| tig0021283 | exon | 4814 | 4863 | 4814 | ID=Msa1389420-mRNA-1:exon:11653;Parent=Msa1389420-mRNA-1 |
| tig0021283 | exon | 7632 | 7673 | 7632 | ID=Msa1389420-mRNA-1:exon:11652;Parent=Msa1389420-mRNA-1 |
| tig0021283 | exon | 7825 | 7900 | 7825 | ID=Msa1389420-mRNA-1:exon:11651;Parent=Msa1389420-mRNA-1 |
| tig0021283 | exon | 8012 | 8175 | 8012 | ID=Msa1389420-mRNA-1:exon:11650;Parent=Msa1389420-mRNA-1 |
| tig0021283 | exon | 8260 | 8664 | 8260 | ID=Msa1389420-mRNA-1:exon:11649;Parent=Msa1389420-mRNA-1 |
| tig0021283 | five_prime_UTR | 8575 | 8664 | 8575 | ID=Msa1389420-mRNA-1:five_prime_utr;Parent=Msa1389420-mRNA-1 |
| tig0021283 | CDS | 8260 | 8574 | 8260 | ID=Msa1389420-mRNA-1:cds;Parent=Msa1389420-mRNA-1 |
| tig0021283 | CDS | 8012 | 8175 | 8012 | ID=Msa1389420-mRNA-1:cds;Parent=Msa1389420-mRNA-1 |
| tig0021283 | CDS | 7825 | 7900 | 7825 | ID=Msa1389420-mRNA-1:cds;Parent=Msa1389420-mRNA-1 |
| tig0021283 | CDS | 7632 | 7673 | 7632 | ID=Msa1389420-mRNA-1:cds;Parent=Msa1389420-mRNA-1 |
| tig0021283 | CDS | 4814 | 4863 | 4814 | ID=Msa1389420-mRNA-1:cds;Parent=Msa1389420-mRNA-1 |
| tig0021283 | CDS | 4704 | 4731 | 4704 | ID=Msa1389420-mRNA-1:cds;Parent=Msa1389420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
