Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391340 | GAU12040.1 | 72.093 | 258 | 36 | 8 | 1 | 224 | 1 | 256 | 2.36e-95 | 297 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391340 | sp|Q8RWD5|SCD2_ARATH | 42.606 | 284 | 100 | 9 | 1 | 224 | 1 | 281 | 2.62e-36 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391340 | A0A1S2Y0M1 | 69.141 | 256 | 37 | 10 | 1 | 224 | 1 | 246 | 1.52e-84 | 270 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1389420 | Msa1391340 | 0.928462 | 2.792664e-92 | -8.615850e-47 |
| Msa1391340 | Msa1447500 | 0.821704 | 3.504514e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391340 | MtrunA17_Chr3g0131741 | 46.071 | 280 | 88 | 10 | 1 | 224 | 1 | 273 | 9.28e-39 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391340 | AT5G13260.1 | 44.322 | 273 | 87 | 9 | 1 | 224 | 1 | 257 | 3.08e-40 | 144 |
| Msa1391340 | AT3G48860.1 | 42.606 | 284 | 100 | 9 | 1 | 224 | 1 | 281 | 1.03e-37 | 137 |
| Msa1391340 | AT3G48860.2 | 42.606 | 284 | 100 | 9 | 1 | 224 | 1 | 281 | 2.66e-37 | 137 |
| Msa1391340 | AT5G23700.2 | 43.243 | 259 | 108 | 9 | 1 | 224 | 1 | 255 | 5.98e-36 | 133 |
| Msa1391340 | AT5G23700.1 | 43.243 | 259 | 108 | 9 | 1 | 224 | 1 | 255 | 7.34e-36 | 133 |
| Msa1391340 | AT5G23700.3 | 43.243 | 259 | 108 | 9 | 1 | 224 | 1 | 255 | 7.69e-36 | 133 |
| Msa1391340 | AT3G48860.3 | 50.000 | 118 | 33 | 3 | 130 | 224 | 13 | 127 | 3.10e-24 | 99.8 |
| Msa1391340 | AT4G08630.2 | 36.095 | 169 | 76 | 6 | 88 | 224 | 339 | 507 | 2.95e-15 | 74.7 |
| Msa1391340 | AT4G08630.1 | 35.882 | 170 | 76 | 7 | 88 | 224 | 339 | 508 | 1.15e-13 | 70.1 |
| Msa1391340 | AT4G25070.1 | 52.778 | 72 | 13 | 1 | 174 | 224 | 399 | 470 | 1.62e-12 | 66.6 |
| Msa1391340 | AT4G25070.2 | 52.778 | 72 | 13 | 1 | 174 | 224 | 401 | 472 | 1.67e-12 | 66.6 |
Find 69 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGGAATTTCAACCATTAAA+AGG | 0.212578 | tig0021430:-5456 | Msa1391340:CDS |
| CCTTGGAGAAGGAGCATCTT+TGG | 0.246185 | tig0021430:-1838 | Msa1391340:CDS |
| TTCTAAAATGCCTCTTTATT+CGG | 0.276176 | tig0021430:+5605 | None:intergenic |
| CGGTTGTCTCCTAAATCTTT+TGG | 0.277252 | tig0021430:+4863 | None:intergenic |
| CTTGTTCAACCAAAAGATTT+AGG | 0.308911 | tig0021430:-4872 | Msa1391340:CDS |
| ATACTAAGCCCAAAGATAAA+AGG | 0.330441 | tig0021430:-5024 | Msa1391340:intron |
| ATGAGTAGTGGCGGACTTCC+TGG | 0.330661 | tig0021430:+5294 | None:intergenic |
| GAGGCGTTGAGCAGCAGCTT+TGG | 0.391765 | tig0021430:+5417 | None:intergenic |
| CATCTTCATTGTCGGCAACC+TGG | 0.410466 | tig0021430:+5377 | None:intergenic |
| AGTTTGTAGGTTGCTTCCCT+TGG | 0.418586 | tig0021430:-1855 | Msa1391340:intron |
| CTCCACTGCCGGATCGAAAC+CGG | 0.418764 | tig0021430:+5538 | None:intergenic |
| GAACAGTAGCTGGGGTCCTC+TGG | 0.420844 | tig0021430:+5071 | None:intergenic |
| GAAGATGACGACGACGATCT+AGG | 0.423022 | tig0021430:-5352 | Msa1391340:CDS |
| TTATGAATGGGAGGGTCTAT+TGG | 0.427689 | tig0021430:+5046 | None:intergenic |
| ATCTTCGTCATCTTCATTGT+CGG | 0.428359 | tig0021430:+5369 | None:intergenic |
| ACATACATTGGTTCGTCTAC+AGG | 0.428715 | tig0021430:+5148 | None:intergenic |
| CCTGCAGGTCGATGTGCTTA+GGG | 0.438550 | tig0021430:-4671 | Msa1391340:intron |
| ATCTTCATTGTCGGCAACCT+GGG | 0.449451 | tig0021430:+5378 | None:intergenic |
| TTTGGGCTTAGTATTATGAA+TGG | 0.461092 | tig0021430:+5033 | None:intergenic |
| CGGCAGTGGAGTAGTGAATC+GGG | 0.468209 | tig0021430:-5526 | Msa1391340:CDS |
| TACAGATTTCTGTTTGATAC+CGG | 0.479012 | tig0021430:-4896 | Msa1391340:intron |
| TAGGTTGCTTCCCTTGGAGA+AGG | 0.481095 | tig0021430:-1849 | Msa1391340:CDS |
| GCGAAGAGGAACAGAGAGTC+CGG | 0.488553 | tig0021430:-5557 | Msa1391340:CDS |
| ATGAGCGAGCATGTCGTGAT+GGG | 0.489990 | tig0021430:+5488 | None:intergenic |
| TCTATTGGCAGAACAGTAGC+TGG | 0.490802 | tig0021430:+5061 | None:intergenic |
| TTGGGCTTAGTATTATGAAT+GGG | 0.490989 | tig0021430:+5034 | None:intergenic |
| CGCACAAGTAATGGCTTCCC+AGG | 0.495004 | tig0021430:-5395 | Msa1391340:CDS |
| GATGAGCGAGCATGTCGTGA+TGG | 0.500435 | tig0021430:+5487 | None:intergenic |
| CCGGCAGTGGAGTAGTGAAT+CGG | 0.502248 | tig0021430:-5527 | Msa1391340:CDS |
| CTGGTGAGAGTGAGAGGCGG+AGG | 0.510318 | tig0021430:+5313 | None:intergenic |
| CAGAGAGTCCGGTTTCGATC+CGG | 0.512049 | tig0021430:-5546 | Msa1391340:CDS |
| AATGTATGTTAATGTTCGTC+CGG | 0.515298 | tig0021430:-5134 | Msa1391340:CDS |
| GGACGAACATTAACATACAT+TGG | 0.515306 | tig0021430:+5136 | None:intergenic |
| CTCCGCCTCTCACTCTCACC+AGG | 0.517105 | tig0021430:-5312 | Msa1391340:CDS |
| GACTTCCTGGTGAGAGTGAG+AGG | 0.525644 | tig0021430:+5307 | None:intergenic |
| TGGAAGCTAAACTCTTGAGC+AGG | 0.525811 | tig0021430:-1818 | Msa1391340:intron |
| GTCCGGTTTCGATCCGGCAG+TGG | 0.534140 | tig0021430:-5540 | Msa1391340:CDS |
| GGGGTCCTCTGGTTCAGCGG+TGG | 0.534663 | tig0021430:+5082 | None:intergenic |
| CCGATTCACTACTCCACTGC+CGG | 0.534900 | tig0021430:+5527 | None:intergenic |
| AATGGTTGAAATTCCGGTGA+GGG | 0.536408 | tig0021430:+5462 | None:intergenic |
| GGCTTAGTATTATGAATGGG+AGG | 0.544073 | tig0021430:+5037 | None:intergenic |
| TCAACGCCTCGCACAAGTAA+TGG | 0.544627 | tig0021430:-5404 | Msa1391340:CDS |
| CCAAAGATGCTCCTTCTCCA+AGG | 0.561548 | tig0021430:+1838 | None:intergenic |
| AAGAATCTGACCGCATGAGA+AGG | 0.561668 | tig0021430:+5259 | None:intergenic |
| CACGAAGAGTTGAGGCCTCA+CGG | 0.563314 | tig0021430:+4843 | None:intergenic |
| TTATTATTAGGTGCTACTGC+CGG | 0.567252 | tig0021430:+5115 | None:intergenic |
| CTATTGGCAGAACAGTAGCT+GGG | 0.569525 | tig0021430:+5062 | None:intergenic |
| GGCAGCATTGCGTCAAAGAG+AGG | 0.571935 | tig0021430:-1708 | None:intergenic |
| CTTATTAAATTACAGAAAGG+AGG | 0.573084 | tig0021430:-1729 | Msa1391340:intron |
| GGCCTCAACTCTTCGTGACG+AGG | 0.575243 | tig0021430:-4837 | Msa1391340:intron |
| CAAAGATGCTCCTTCTCCAA+GGG | 0.581056 | tig0021430:+1839 | None:intergenic |
| GCTCGCTCATCTTCCCTCAC+CGG | 0.586627 | tig0021430:-5475 | Msa1391340:CDS |
| GCTGGGGTCCTCTGGTTCAG+CGG | 0.597931 | tig0021430:+5079 | None:intergenic |
| AACCTCGTCACGAAGAGTTG+AGG | 0.621673 | tig0021430:+4835 | None:intergenic |
| ATAAACCACCGCTGAACCAG+AGG | 0.629645 | tig0021430:-5087 | Msa1391340:CDS |
| GCTTAGTATTATGAATGGGA+GGG | 0.630118 | tig0021430:+5038 | None:intergenic |
| GTAATGAGCACCGAATAAAG+AGG | 0.642553 | tig0021430:-5615 | Msa1391340:five_prime_UTR |
| TGAGCGAGCATGTCGTGATG+GGG | 0.648303 | tig0021430:+5489 | None:intergenic |
| TAATGGTTGAAATTCCGGTG+AGG | 0.658752 | tig0021430:+5461 | None:intergenic |
| ACATTGGTTCGTCTACAGGA+AGG | 0.661173 | tig0021430:+5152 | None:intergenic |
| TCTGTGAGTATGAGTAGTGG+CGG | 0.662883 | tig0021430:+5285 | None:intergenic |
| TTCCTGGTGAGAGTGAGAGG+CGG | 0.662914 | tig0021430:+5310 | None:intergenic |
| GGGAAGCCATTACTTGTGCG+AGG | 0.664261 | tig0021430:+5398 | None:intergenic |
| TATTGGCAGAACAGTAGCTG+GGG | 0.670400 | tig0021430:+5063 | None:intergenic |
| TGTTAGAAGATGGAGCGAAG+AGG | 0.671932 | tig0021430:-5571 | Msa1391340:exon |
| AGATCTGTGAGTATGAGTAG+TGG | 0.677373 | tig0021430:+5282 | None:intergenic |
| TCACAGATCTCCTTCTCATG+CGG | 0.680149 | tig0021430:-5269 | Msa1391340:intron |
| GGCAGTGGAGTAGTGAATCG+GGG | 0.681345 | tig0021430:-5525 | Msa1391340:CDS |
| AGATTTAGGAGACAACCGTG+AGG | 0.804602 | tig0021430:-4858 | Msa1391340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GGTTTATTATTATTATTATT+AGG | + | tig0021430:2261-2280 | None:intergenic | 10.0% |
| !!! | TTTTTAGAAAAAATAGATTT+TGG | - | tig0021430:3078-3097 | Msa1391340:intron | 10.0% |
| !!! | AAAAAAATAAAGTGATTTTT+TGG | + | tig0021430:3448-3467 | None:intergenic | 10.0% |
| !!! | AACAAAATAGATTTTTTAAA+AGG | + | tig0021430:3936-3955 | None:intergenic | 10.0% |
| !! | TATTAGAAGAAAAAAAAAAT+TGG | + | tig0021430:3995-4014 | None:intergenic | 10.0% |
| !!! | TGGATTTTTTAAAAAAAAAA+AGG | + | tig0021430:4159-4178 | None:intergenic | 10.0% |
| !!! | TTTTTTTGTATTTAATACAT+TGG | - | tig0021430:4842-4861 | Msa1391340:CDS | 10.0% |
| !!! | TCATTTTTAAGTATTTGTTT+AGG | - | tig0021430:3156-3175 | Msa1391340:intron | 15.0% |
| !!! | TTTTTTTTTCAAAAACAAAG+AGG | - | tig0021430:3264-3283 | Msa1391340:intron | 15.0% |
| !!! | TTTGTTTCAGATTTTAAAAA+GGG | - | tig0021430:3481-3500 | Msa1391340:intron | 15.0% |
| !!! | TTTTTAAAAGGAAAATTCTA+TGG | + | tig0021430:3924-3943 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTTCTAATAACA+AGG | - | tig0021430:3998-4017 | Msa1391340:intron | 15.0% |
| !! | TTTAAAAAATCCAAAACAAA+CGG | - | tig0021430:4166-4185 | Msa1391340:intron | 15.0% |
| !! | GTCTACAAAAAAAAAATAAT+TGG | + | tig0021430:4261-4280 | None:intergenic | 15.0% |
| !! | TTAACTAAATACTAGTAAAT+AGG | + | tig0021430:4305-4324 | None:intergenic | 15.0% |
| !! | TTTACTAGTATTTAGTTAAA+AGG | - | tig0021430:4306-4325 | Msa1391340:intron | 15.0% |
| !! | TTACTAGTATTTAGTTAAAA+GGG | - | tig0021430:4307-4326 | Msa1391340:intron | 15.0% |
| !!! | ACTAATTTTATGATTTAACT+CGG | + | tig0021430:4608-4627 | None:intergenic | 15.0% |
| !! | TCATAAAAACTTACAATTTA+AGG | + | tig0021430:4820-4839 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTCTAGTTGTTTA+GGG | + | tig0021430:5323-5342 | None:intergenic | 15.0% |
| !! | TTCTGTAATTTAATAAGATT+GGG | + | tig0021430:5629-5648 | None:intergenic | 15.0% |
| !! | TTTCTGTAATTTAATAAGAT+TGG | + | tig0021430:5630-5649 | None:intergenic | 15.0% |
| !! | AATCTTATTAAATTACAGAA+AGG | - | tig0021430:5629-5648 | Msa1391340:five_prime_UTR | 15.0% |
| !! | TTAGTTAGTGATAAATGAAT+GGG | + | tig0021430:2146-2165 | None:intergenic | 20.0% |
| !! | ATTAGTTAGTGATAAATGAA+TGG | + | tig0021430:2147-2166 | None:intergenic | 20.0% |
| !!! | CTTTTATGATAGTAAACAAA+TGG | + | tig0021430:3015-3034 | None:intergenic | 20.0% |
| !! | AAAAAAAATCCCAAACAAAT+GGG | + | tig0021430:3424-3443 | None:intergenic | 20.0% |
| !! | TAAAAAAAATCCCAAACAAA+TGG | + | tig0021430:3425-3444 | None:intergenic | 20.0% |
| !!! | GTTTGTTTCAGATTTTAAAA+AGG | - | tig0021430:3480-3499 | Msa1391340:intron | 20.0% |
| !!! | TTGTTTCAGATTTTAAAAAG+GGG | - | tig0021430:3482-3501 | Msa1391340:intron | 20.0% |
| !!! | TACATGTACTATTTTATCAT+TGG | - | tig0021430:3652-3671 | Msa1391340:intron | 20.0% |
| !!! | AATCTCTTTTATTGTTTTAG+TGG | + | tig0021430:4119-4138 | None:intergenic | 20.0% |
| !! | TTAAAAAATCCAAAACAAAC+GGG | - | tig0021430:4167-4186 | Msa1391340:intron | 20.0% |
| !! | TCTTTAAATATGTGAAAAAC+TGG | + | tig0021430:4666-4685 | None:intergenic | 20.0% |
| !! | TTTAAATAGGATGACATATA+AGG | - | tig0021430:4704-4723 | Msa1391340:intron | 20.0% |
| !! | ATCTCAAAATAGAACTTAAT+AGG | - | tig0021430:4756-4775 | Msa1391340:intron | 20.0% |
| !! | TCTCAAAATAGAACTTAATA+GGG | - | tig0021430:4757-4776 | Msa1391340:intron | 20.0% |
| !!! | TAGGTCTTTTATTTTCAAAA+GGG | + | tig0021430:4951-4970 | None:intergenic | 20.0% |
| !!! | ATAGGTCTTTTATTTTCAAA+AGG | + | tig0021430:4952-4971 | None:intergenic | 20.0% |
| !!! | GATTTTTTTTCTAGTTGTTT+AGG | + | tig0021430:5324-5343 | None:intergenic | 20.0% |
| !!! | GAAGTATTTAATTGATTAGA+GGG | + | tig0021430:5364-5383 | None:intergenic | 20.0% |
| !!! | AGAAGTATTTAATTGATTAG+AGG | + | tig0021430:5365-5384 | None:intergenic | 20.0% |
| !!! | TTCTAAAATGCCTCTTTATT+CGG | + | tig0021430:1759-1778 | None:intergenic | 25.0% |
| !!! | AATAAAGAGGCATTTTAGAA+AGG | - | tig0021430:1759-1778 | Msa1391340:intron | 25.0% |
| !!! | ATAAAGAGGCATTTTAGAAA+GGG | - | tig0021430:1760-1779 | Msa1391340:intron | 25.0% |
| ! | TAGTTAGTGATAAATGAATG+GGG | + | tig0021430:2145-2164 | None:intergenic | 25.0% |
| ! | GAAAGATTATTCATTTGTGA+AGG | + | tig0021430:2428-2447 | None:intergenic | 25.0% |
| !!! | GAATGAAAGTATTTTTGACA+AGG | - | tig0021430:2717-2736 | Msa1391340:intron | 25.0% |
| ! | TGTTTCTTTATCATTAGCTA+TGG | - | tig0021430:2901-2920 | Msa1391340:intron | 25.0% |
| ! | GTTTCTTTATCATTAGCTAT+GGG | - | tig0021430:2902-2921 | Msa1391340:intron | 25.0% |
| !! | CCTAATAGCTTTTCATTTTA+TGG | + | tig0021430:3222-3241 | None:intergenic | 25.0% |
| ! | CCATAAAATGAAAAGCTATT+AGG | - | tig0021430:3219-3238 | Msa1391340:intron | 25.0% |
| !! | AAAAATAATTGGCCTGATTT+GGG | + | tig0021430:4250-4269 | None:intergenic | 25.0% |
| !! | AAAAAATAATTGGCCTGATT+TGG | + | tig0021430:4251-4270 | None:intergenic | 25.0% |
| !!! | AAACACCAAAAAAGTATTCT+TGG | - | tig0021430:4339-4358 | Msa1391340:intron | 25.0% |
| !!! | AAGTTTGTTTTGTAACAGAT+AGG | + | tig0021430:4489-4508 | None:intergenic | 25.0% |
| ! | CTGTTACAAAACAAACTTAA+AGG | - | tig0021430:4491-4510 | Msa1391340:intron | 25.0% |
| ! | TACAAGCTACAATATTGTAA+GGG | + | tig0021430:5019-5038 | None:intergenic | 25.0% |
| ! | ACTAGAAAAAAAATCATGCT+TGG | - | tig0021430:5329-5348 | Msa1391340:CDS | 25.0% |
| ! | CTAGAAAAAAAATCATGCTT+GGG | - | tig0021430:5330-5349 | Msa1391340:CDS | 25.0% |
| ! | CTTATTAAATTACAGAAAGG+AGG | - | tig0021430:5632-5651 | Msa1391340:five_prime_UTR | 25.0% |
| !!! | TAAAGAGGCATTTTAGAAAG+GGG | - | tig0021430:1761-1780 | Msa1391340:intron | 30.0% |
| ! | CCTTTTAATGGTTGAAATTC+CGG | + | tig0021430:1908-1927 | None:intergenic | 30.0% |
| ! | AACATTCTGAGTCCTTTTAA+TGG | + | tig0021430:1920-1939 | None:intergenic | 30.0% |
| TGATTAGAAAAAGGTGAATG+AGG | + | tig0021430:2177-2196 | None:intergenic | 30.0% | |
| ! | CTTTTTCTAATCAGTTAGCT+CGG | - | tig0021430:2184-2203 | Msa1391340:intron | 30.0% |
| AATGTATGTTAATGTTCGTC+CGG | - | tig0021430:2227-2246 | Msa1391340:intron | 30.0% | |
| TTGGGCTTAGTATTATGAAT+GGG | + | tig0021430:2330-2349 | None:intergenic | 30.0% | |
| TTTGGGCTTAGTATTATGAA+TGG | + | tig0021430:2331-2350 | None:intergenic | 30.0% | |
| ATACTAAGCCCAAAGATAAA+AGG | - | tig0021430:2337-2356 | Msa1391340:intron | 30.0% | |
| ! | TTGGTTCACCTTTTATCTTT+GGG | + | tig0021430:2348-2367 | None:intergenic | 30.0% |
| GATTATTCATTTGTGAAGGA+TGG | + | tig0021430:2424-2443 | None:intergenic | 30.0% | |
| TACAGATTTCTGTTTGATAC+CGG | - | tig0021430:2465-2484 | Msa1391340:intron | 30.0% | |
| CTTGTTCAACCAAAAGATTT+AGG | - | tig0021430:2489-2508 | Msa1391340:intron | 30.0% | |
| GGAGCAATAGTATATGTATA+TGG | + | tig0021430:2645-2664 | None:intergenic | 30.0% | |
| !!! | TGTTTTGGGTTAGTTTAGAA+GGG | + | tig0021430:2666-2685 | None:intergenic | 30.0% |
| !!! | TTGTTTTGGGTTAGTTTAGA+AGG | + | tig0021430:2667-2686 | None:intergenic | 30.0% |
| TATCATTAGCTATGGGAATA+TGG | - | tig0021430:2909-2928 | Msa1391340:intron | 30.0% | |
| ATCATTAGCTATGGGAATAT+GGG | - | tig0021430:2910-2929 | Msa1391340:intron | 30.0% | |
| !! | TAGATTTTGGAAAAGCAACT+AGG | - | tig0021430:3091-3110 | Msa1391340:intron | 30.0% |
| !! | AGATTTTGGAAAAGCAACTA+GGG | - | tig0021430:3092-3111 | Msa1391340:intron | 30.0% |
| ! | AATGAATTTTTATGGGCAGT+AGG | - | tig0021430:3321-3340 | Msa1391340:intron | 30.0% |
| TCTTAAGTGTTACACTTTGT+GGG | - | tig0021430:3717-3736 | Msa1391340:intron | 30.0% | |
| ! | GATGAATTGATGATACTATG+AGG | - | tig0021430:3797-3816 | Msa1391340:intron | 30.0% |
| ! | AGTCATTAGAATGACTTTTC+TGG | + | tig0021430:3898-3917 | None:intergenic | 30.0% |
| TCTTCTAATAACAAGGAACA+AGG | - | tig0021430:4005-4024 | Msa1391340:intron | 30.0% | |
| ! | AAAATAATTGGCCTGATTTG+GGG | + | tig0021430:4249-4268 | None:intergenic | 30.0% |
| GTTTGACGTTTGTAACATAT+AGG | + | tig0021430:4518-4537 | None:intergenic | 30.0% | |
| GTTACAAACGTCAAACTTAA+AGG | - | tig0021430:4522-4541 | Msa1391340:intron | 30.0% | |
| AAATATGTGAAAAACTGGTG+CGG | + | tig0021430:4661-4680 | None:intergenic | 30.0% | |
| ! | GGTCAAGGTTTTTCATAAAT+AGG | + | tig0021430:4970-4989 | None:intergenic | 30.0% |
| ACAATATTGTAAGGGGAATA+GGG | + | tig0021430:5011-5030 | None:intergenic | 30.0% | |
| TACAATATTGTAAGGGGAAT+AGG | + | tig0021430:5012-5031 | None:intergenic | 30.0% | |
| ACAAGCTACAATATTGTAAG+GGG | + | tig0021430:5018-5037 | None:intergenic | 30.0% | |
| CTACAAGCTACAATATTGTA+AGG | + | tig0021430:5020-5039 | None:intergenic | 30.0% | |
| ! | AATGATTGTCTCCTTGTTAT+TGG | - | tig0021430:5056-5075 | Msa1391340:CDS | 30.0% |
| !! | ATGATTGTCTCCTTGTTATT+GGG | - | tig0021430:5057-5076 | Msa1391340:CDS | 30.0% |
| TCTAGGTAAATGAAACTAGA+AGG | + | tig0021430:5170-5189 | None:intergenic | 30.0% | |
| GTATTTAATTGATTAGAGGG+AGG | + | tig0021430:5361-5380 | None:intergenic | 30.0% | |
| AGACTTAAGAGAAAATTCAC+TGG | + | tig0021430:5452-5471 | None:intergenic | 30.0% | |
| AAAGTTAAACCTGTTGCATA+TGG | - | tig0021430:5576-5595 | Msa1391340:exon | 30.0% | |
| TTCATAAATCTACCAAGTGA+AGG | + | tig0021430:5606-5625 | None:intergenic | 30.0% | |
| !!! | AAAGAGGCATTTTAGAAAGG+GGG | - | tig0021430:1762-1781 | Msa1391340:intron | 35.0% |
| CCGGAATTTCAACCATTAAA+AGG | - | tig0021430:1905-1924 | Msa1391340:intron | 35.0% | |
| ATCTTCGTCATCTTCATTGT+CGG | + | tig0021430:1995-2014 | None:intergenic | 35.0% | |
| GATAAATGAATGGGGTTAAG+TGG | + | tig0021430:2137-2156 | None:intergenic | 35.0% | |
| CGAGCTAACTGATTAGAAAA+AGG | + | tig0021430:2186-2205 | None:intergenic | 35.0% | |
| GGACGAACATTAACATACAT+TGG | + | tig0021430:2228-2247 | None:intergenic | 35.0% | |
| !! | TTATTATTAGGTGCTACTGC+CGG | + | tig0021430:2249-2268 | None:intergenic | 35.0% |
| GCTTAGTATTATGAATGGGA+GGG | + | tig0021430:2326-2345 | None:intergenic | 35.0% | |
| !! | GTTGGTTCACCTTTTATCTT+TGG | + | tig0021430:2349-2368 | None:intergenic | 35.0% |
| AAAGAGAATGAGCAGATAGT+TGG | + | tig0021430:2367-2386 | None:intergenic | 35.0% | |
| TAATGTGAGAATGAGCAGTT+AGG | + | tig0021430:2401-2420 | None:intergenic | 35.0% | |
| !! | ATCTTTTGGTTGAACAAGTC+CGG | + | tig0021430:2487-2506 | None:intergenic | 35.0% |
| TTTAAAAAGGGGAGCTTCTA+CGG | - | tig0021430:3493-3512 | Msa1391340:intron | 35.0% | |
| GTCTTAAGTGTTACACTTTG+TGG | - | tig0021430:3716-3735 | Msa1391340:intron | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | - | tig0021430:3718-3737 | Msa1391340:intron | 35.0% | |
| TGTTACGCTTAAAACAAGGT+AGG | - | tig0021430:3741-3760 | Msa1391340:intron | 35.0% | |
| TGATGTCATTGTACAAACAG+TGG | - | tig0021430:3830-3849 | Msa1391340:intron | 35.0% | |
| GATGTCATTGTACAAACAGT+GGG | - | tig0021430:3831-3850 | Msa1391340:intron | 35.0% | |
| ATGTCATTGTACAAACAGTG+GGG | - | tig0021430:3832-3851 | Msa1391340:intron | 35.0% | |
| !!! | GTTTTGAAGCTCTTACATCT+GGG | + | tig0021430:4033-4052 | None:intergenic | 35.0% |
| !!! | AGTTTTGAAGCTCTTACATC+TGG | + | tig0021430:4034-4053 | None:intergenic | 35.0% |
| TGTTGTTCAGCCAAATTGTT+CGG | + | tig0021430:4201-4220 | None:intergenic | 35.0% | |
| AACAATTTGGCTGAACAACA+AGG | - | tig0021430:4201-4220 | Msa1391340:intron | 35.0% | |
| ACAATTTGGCTGAACAACAA+GGG | - | tig0021430:4202-4221 | Msa1391340:intron | 35.0% | |
| !!! | GTAGGCCAAGAATACTTTTT+TGG | + | tig0021430:4347-4366 | None:intergenic | 35.0% |
| ! | CATCTCCTTTACCCTTTTAA+AGG | + | tig0021430:4375-4394 | None:intergenic | 35.0% |
| !!! | ACGTCAGCGTATTTTTTTGA+CGG | - | tig0021430:4416-4435 | Msa1391340:intron | 35.0% |
| ! | TTTGACGGTTAGTTAACAGA+AGG | - | tig0021430:4431-4450 | Msa1391340:intron | 35.0% |
| GCACACTGTTACAAAGTTAA+AGG | - | tig0021430:4462-4481 | Msa1391340:intron | 35.0% | |
| ! | ATTTGGCTTAATTACACCAC+AGG | + | tig0021430:4549-4568 | None:intergenic | 35.0% |
| GCTAGTATGCTTAAAAGAAC+TGG | + | tig0021430:4638-4657 | None:intergenic | 35.0% | |
| AATATGTGAAAAACTGGTGC+GGG | + | tig0021430:4660-4679 | None:intergenic | 35.0% | |
| TATTGTCTCACCCAATAACA+AGG | + | tig0021430:5070-5089 | None:intergenic | 35.0% | |
| TCATTTACCTAGAGATAGAC+TGG | - | tig0021430:5177-5196 | Msa1391340:intron | 35.0% | |
| AATACAACCAGTCTATCTCT+AGG | + | tig0021430:5187-5206 | None:intergenic | 35.0% | |
| ! | GAGATAGACTGGTTGTATTT+AGG | - | tig0021430:5188-5207 | Msa1391340:intron | 35.0% |
| ! | CTAGTTGTTTAGGGTACAAT+CGG | + | tig0021430:5314-5333 | None:intergenic | 35.0% |
| TTCTTTCCATCCAAGTTTGT+AGG | - | tig0021430:5493-5512 | Msa1391340:CDS | 35.0% | |
| !! | GTAATGAGCACCGAATAAAG+AGG | - | tig0021430:1746-1765 | Msa1391340:intron | 40.0% |
| AATGGTTGAAATTCCGGTGA+GGG | + | tig0021430:1902-1921 | None:intergenic | 40.0% | |
| TAATGGTTGAAATTCCGGTG+AGG | + | tig0021430:1903-1922 | None:intergenic | 40.0% | |
| AGATCTGTGAGTATGAGTAG+TGG | + | tig0021430:2082-2101 | None:intergenic | 40.0% | |
| TGAATGGGGTTAAGTGGAAA+GGG | + | tig0021430:2131-2150 | None:intergenic | 40.0% | |
| ATGAATGGGGTTAAGTGGAA+AGG | + | tig0021430:2132-2151 | None:intergenic | 40.0% | |
| !! | ACATACATTGGTTCGTCTAC+AGG | + | tig0021430:2216-2235 | None:intergenic | 40.0% |
| TTATGAATGGGAGGGTCTAT+TGG | + | tig0021430:2318-2337 | None:intergenic | 40.0% | |
| GGCTTAGTATTATGAATGGG+AGG | + | tig0021430:2327-2346 | None:intergenic | 40.0% | |
| ! | CGGTTGTCTCCTAAATCTTT+TGG | + | tig0021430:2501-2520 | None:intergenic | 40.0% |
| TGTGTGTGTGTTAAGTCTAG+TGG | - | tig0021430:2615-2634 | Msa1391340:intron | 40.0% | |
| AAACGTACAGCTTAGACTTG+AGG | - | tig0021430:2818-2837 | Msa1391340:intron | 40.0% | |
| TACAGCTTAGACTTGAGGAA+GGG | - | tig0021430:2823-2842 | Msa1391340:intron | 40.0% | |
| ! | GAATATGGGTGCGTTTGTTT+TGG | - | tig0021430:2924-2943 | Msa1391340:intron | 40.0% |
| AACAAACACACCCTAGGAAT+AGG | - | tig0021430:3398-3417 | Msa1391340:intron | 40.0% | |
| AACAAATGGGCCTATTCCTA+GGG | + | tig0021430:3411-3430 | None:intergenic | 40.0% | |
| AAACAAATGGGCCTATTCCT+AGG | + | tig0021430:3412-3431 | None:intergenic | 40.0% | |
| TAGGAATAGGCCCATTTGTT+TGG | - | tig0021430:3411-3430 | Msa1391340:intron | 40.0% | |
| AGGAATAGGCCCATTTGTTT+GGG | - | tig0021430:3412-3431 | Msa1391340:intron | 40.0% | |
| TAGTAATGCTTGCGACATCT+TGG | - | tig0021430:3627-3646 | Msa1391340:intron | 40.0% | |
| !! | AAAAGTATTCTTGGCCTACC+AGG | - | tig0021430:4348-4367 | Msa1391340:intron | 40.0% |
| !! | CTTTACCCTTTTAAAGGACC+TGG | + | tig0021430:4369-4388 | None:intergenic | 40.0% |
| ! | CAGGTCCTTTAAAAGGGTAA+AGG | - | tig0021430:4367-4386 | Msa1391340:intron | 40.0% |
| GTCAAAAAAATACGCTGACG+TGG | + | tig0021430:4417-4436 | None:intergenic | 40.0% | |
| CAACTACAAGACACTCTTTC+TGG | + | tig0021430:4916-4935 | None:intergenic | 40.0% | |
| AATAGGGATAGGAATGGGAT+GGG | + | tig0021430:4995-5014 | None:intergenic | 40.0% | |
| ATTGTAAGGGGAATAGGGAT+AGG | + | tig0021430:5006-5025 | None:intergenic | 40.0% | |
| ! | GTAGCTTGTAGAGTTGACTA+TGG | - | tig0021430:5029-5048 | Msa1391340:CDS | 40.0% |
| ATGCTAGAGAATGTAACTCC+TGG | - | tig0021430:5241-5260 | Msa1391340:intron | 40.0% | |
| TAGGCAGTAATCATTGAACC+AGG | + | tig0021430:5262-5281 | None:intergenic | 40.0% | |
| ATGATTACTGCCTATGCCAT+TGG | - | tig0021430:5268-5287 | Msa1391340:intron | 40.0% | |
| AACTCAAACTCCTAGTCCAA+TGG | + | tig0021430:5287-5306 | None:intergenic | 40.0% | |
| AAGCAACCTACAAACTTGGA+TGG | + | tig0021430:5502-5521 | None:intergenic | 40.0% | |
| GAAGGAAAACCATATGCAAC+AGG | + | tig0021430:5588-5607 | None:intergenic | 40.0% | |
| ! | GCATATGGTTTTCCTTCACT+TGG | - | tig0021430:5591-5610 | Msa1391340:five_prime_UTR | 40.0% |
| GGGGGCAAATTGTTAGAAGA+TGG | - | tig0021430:1780-1799 | Msa1391340:intron | 45.0% | |
| TGTTAGAAGATGGAGCGAAG+AGG | - | tig0021430:1790-1809 | Msa1391340:intron | 45.0% | |
| ATCTTCATTGTCGGCAACCT+GGG | + | tig0021430:1986-2005 | None:intergenic | 45.0% | |
| TCTGTGAGTATGAGTAGTGG+CGG | + | tig0021430:2079-2098 | None:intergenic | 45.0% | |
| TCACAGATCTCCTTCTCATG+CGG | - | tig0021430:2092-2111 | Msa1391340:intron | 45.0% | |
| AAGAATCTGACCGCATGAGA+AGG | + | tig0021430:2105-2124 | None:intergenic | 45.0% | |
| AATGGGGTTAAGTGGAAAGG+GGG | + | tig0021430:2129-2148 | None:intergenic | 45.0% | |
| GAATGGGGTTAAGTGGAAAG+GGG | + | tig0021430:2130-2149 | None:intergenic | 45.0% | |
| !! | ACATTGGTTCGTCTACAGGA+AGG | + | tig0021430:2212-2231 | None:intergenic | 45.0% |
| TATTGGCAGAACAGTAGCTG+GGG | + | tig0021430:2301-2320 | None:intergenic | 45.0% | |
| CTATTGGCAGAACAGTAGCT+GGG | + | tig0021430:2302-2321 | None:intergenic | 45.0% | |
| TCTATTGGCAGAACAGTAGC+TGG | + | tig0021430:2303-2322 | None:intergenic | 45.0% | |
| AGATTTAGGAGACAACCGTG+AGG | - | tig0021430:2503-2522 | Msa1391340:intron | 45.0% | |
| GTGTGTGTTAAGTCTAGTGG+AGG | - | tig0021430:2618-2637 | Msa1391340:intron | 45.0% | |
| AACCCAAAACAAATCCCTGC+AGG | - | tig0021430:2675-2694 | Msa1391340:intron | 45.0% | |
| !! | GACCTGCAGGGATTTGTTTT+GGG | + | tig0021430:2680-2699 | None:intergenic | 45.0% |
| GTACAGCTTAGACTTGAGGA+AGG | - | tig0021430:2822-2841 | Msa1391340:intron | 45.0% | |
| AGCTGAAACAAACACACCCT+AGG | - | tig0021430:3392-3411 | Msa1391340:intron | 45.0% | |
| ! | GGGGTGTTACGCTTAAAACA+AGG | - | tig0021430:3737-3756 | Msa1391340:intron | 45.0% |
| TCCAAAACAAACGGGTCCTT+TGG | - | tig0021430:4175-4194 | Msa1391340:intron | 45.0% | |
| ! | GCCTACCAGGTCCTTTAAAA+GGG | - | tig0021430:4361-4380 | Msa1391340:intron | 45.0% |
| !! | ACCCTTTTAAAGGACCTGGT+AGG | + | tig0021430:4365-4384 | None:intergenic | 45.0% |
| CGTCAAACTTAAAGGACCTG+TGG | - | tig0021430:4530-4549 | Msa1391340:intron | 45.0% | |
| TCTTGCTAATGAGTGTCCCT+TGG | - | tig0021430:4780-4799 | Msa1391340:intron | 45.0% | |
| TGTCCCTTGGACACTCTTTA+AGG | - | tig0021430:4793-4812 | Msa1391340:intron | 45.0% | |
| !! | GGTCCTTAAAGAGTGTCCAA+GGG | + | tig0021430:4799-4818 | None:intergenic | 45.0% |
| !! | AGGTCCTTAAAGAGTGTCCA+AGG | + | tig0021430:4800-4819 | None:intergenic | 45.0% |
| GAATAGGGATAGGAATGGGA+TGG | + | tig0021430:4996-5015 | None:intergenic | 45.0% | |
| AGGGGAATAGGGATAGGAAT+GGG | + | tig0021430:5000-5019 | None:intergenic | 45.0% | |
| AAGGGGAATAGGGATAGGAA+TGG | + | tig0021430:5001-5020 | None:intergenic | 45.0% | |
| AACTCCTAGTCCAATGGCAT+AGG | + | tig0021430:5281-5300 | None:intergenic | 45.0% | |
| AGGGAAGCAACCTACAAACT+TGG | + | tig0021430:5506-5525 | None:intergenic | 45.0% | |
| AGTTTGTAGGTTGCTTCCCT+TGG | - | tig0021430:5506-5525 | Msa1391340:CDS | 45.0% | |
| CAAAGATGCTCCTTCTCCAA+GGG | + | tig0021430:5525-5544 | None:intergenic | 45.0% | |
| TGGAAGCTAAACTCTTGAGC+AGG | - | tig0021430:5543-5562 | Msa1391340:CDS | 45.0% | |
| !!! | TTTTTTTAAATGAATTTTTA+TGG | - | tig0021430:3313-3332 | Msa1391340:intron | 5.0% |
| !!! | TTTTTTAAATGAATTTTTAT+GGG | - | tig0021430:3314-3333 | Msa1391340:intron | 5.0% |
| !!! | ATTTTTAAAAATTAGATTTT+AGG | + | tig0021430:4084-4103 | None:intergenic | 5.0% |
| !! | AATAATAACAATAAAAAATT+TGG | + | tig0021430:4566-4585 | None:intergenic | 5.0% |
| !! | TTATAAAATAGAATTTAAAT+AGG | - | tig0021430:4691-4710 | Msa1391340:intron | 5.0% |
| ATGAGCGAGCATGTCGTGAT+GGG | + | tig0021430:1876-1895 | None:intergenic | 50.0% | |
| TCAACGCCTCGCACAAGTAA+TGG | - | tig0021430:1957-1976 | Msa1391340:intron | 50.0% | |
| CATCTTCATTGTCGGCAACC+TGG | + | tig0021430:1987-2006 | None:intergenic | 50.0% | |
| GAAGATGACGACGACGATCT+AGG | - | tig0021430:2009-2028 | Msa1391340:intron | 50.0% | |
| ATAAACCACCGCTGAACCAG+AGG | - | tig0021430:2274-2293 | Msa1391340:intron | 50.0% | |
| AACCTCGTCACGAAGAGTTG+AGG | + | tig0021430:2529-2548 | None:intergenic | 50.0% | |
| !! | CGACCTGCAGGGATTTGTTT+TGG | + | tig0021430:2681-2700 | None:intergenic | 50.0% |
| AGGGAGATGCAAAGAAGCTG+AGG | - | tig0021430:2842-2861 | Msa1391340:intron | 50.0% | |
| AAGAAGCTGAGGCCAGAGTT+AGG | - | tig0021430:2853-2872 | Msa1391340:intron | 50.0% | |
| AGAAGCTGAGGCCAGAGTTA+GGG | - | tig0021430:2854-2873 | Msa1391340:intron | 50.0% | |
| CTTCTCAAGCTCCCTAACTC+TGG | + | tig0021430:2868-2887 | None:intergenic | 50.0% | |
| AGTTAGGGAGCTTGAGAAGC+AGG | - | tig0021430:2869-2888 | Msa1391340:intron | 50.0% | |
| ! | GCCAAAGGACCCGTTTGTTT+TGG | + | tig0021430:4179-4198 | None:intergenic | 50.0% |
| GGTCCTTTGGCCGAACAATT+TGG | - | tig0021430:4188-4207 | Msa1391340:intron | 50.0% | |
| CAGCCAAATTGTTCGGCCAA+AGG | + | tig0021430:4194-4213 | None:intergenic | 50.0% | |
| TGGCTGAACAACAAGGGCTA+TGG | - | tig0021430:4208-4227 | Msa1391340:intron | 50.0% | |
| GGCCTACCAGGTCCTTTAAA+AGG | - | tig0021430:4360-4379 | Msa1391340:intron | 50.0% | |
| ACTGCCTATGCCATTGGACT+AGG | - | tig0021430:5274-5293 | Msa1391340:CDS | 50.0% | |
| TAGGTTGCTTCCCTTGGAGA+AGG | - | tig0021430:5512-5531 | Msa1391340:CDS | 50.0% | |
| CCAAAGATGCTCCTTCTCCA+AGG | + | tig0021430:5526-5545 | None:intergenic | 50.0% | |
| !! | CCTTGGAGAAGGAGCATCTT+TGG | - | tig0021430:5523-5542 | Msa1391340:CDS | 50.0% |
| GCGAAGAGGAACAGAGAGTC+CGG | - | tig0021430:1804-1823 | Msa1391340:intron | 55.0% | |
| CAGAGAGTCCGGTTTCGATC+CGG | - | tig0021430:1815-1834 | Msa1391340:intron | 55.0% | |
| CCGATTCACTACTCCACTGC+CGG | + | tig0021430:1837-1856 | None:intergenic | 55.0% | |
| CCGGCAGTGGAGTAGTGAAT+CGG | - | tig0021430:1834-1853 | Msa1391340:CDS | 55.0% | |
| CGGCAGTGGAGTAGTGAATC+GGG | - | tig0021430:1835-1854 | Msa1391340:CDS | 55.0% | |
| GGCAGTGGAGTAGTGAATCG+GGG | - | tig0021430:1836-1855 | Msa1391340:CDS | 55.0% | |
| TGAGCGAGCATGTCGTGATG+GGG | + | tig0021430:1875-1894 | None:intergenic | 55.0% | |
| GATGAGCGAGCATGTCGTGA+TGG | + | tig0021430:1877-1896 | None:intergenic | 55.0% | |
| GGGAAGCCATTACTTGTGCG+AGG | + | tig0021430:1966-1985 | None:intergenic | 55.0% | |
| CGCACAAGTAATGGCTTCCC+AGG | - | tig0021430:1966-1985 | Msa1391340:intron | 55.0% | |
| TTCCTGGTGAGAGTGAGAGG+CGG | + | tig0021430:2054-2073 | None:intergenic | 55.0% | |
| GACTTCCTGGTGAGAGTGAG+AGG | + | tig0021430:2057-2076 | None:intergenic | 55.0% | |
| !! | ATGAGTAGTGGCGGACTTCC+TGG | + | tig0021430:2070-2089 | None:intergenic | 55.0% |
| CACGAAGAGTTGAGGCCTCA+CGG | + | tig0021430:2521-2540 | None:intergenic | 55.0% | |
| CCTAAGCACATCGACCTGCA+GGG | + | tig0021430:2692-2711 | None:intergenic | 55.0% | |
| CCTGCAGGTCGATGTGCTTA+GGG | - | tig0021430:2690-2709 | Msa1391340:intron | 55.0% | |
| GAACAACAAGGGCTATGGCC+TGG | - | tig0021430:4213-4232 | Msa1391340:intron | 55.0% | |
| ! | ATTTGGGGCTCGTGTAGACC+AGG | + | tig0021430:4234-4253 | None:intergenic | 55.0% |
| GTCTACACGAGCCCCAAATC+AGG | - | tig0021430:4235-4254 | Msa1391340:intron | 55.0% | |
| CTCCACTGCCGGATCGAAAC+CGG | + | tig0021430:1826-1845 | None:intergenic | 60.0% | |
| GCTCGCTCATCTTCCCTCAC+CGG | - | tig0021430:1886-1905 | Msa1391340:intron | 60.0% | |
| !! | GAGGCGTTGAGCAGCAGCTT+TGG | + | tig0021430:1947-1966 | None:intergenic | 60.0% |
| GAACAGTAGCTGGGGTCCTC+TGG | + | tig0021430:2293-2312 | None:intergenic | 60.0% | |
| GGCCTCAACTCTTCGTGACG+AGG | - | tig0021430:2524-2543 | Msa1391340:intron | 60.0% | |
| CCCTGCAGGTCGATGTGCTT+AGG | - | tig0021430:2689-2708 | Msa1391340:intron | 60.0% | |
| CCCTAAGCACATCGACCTGC+AGG | + | tig0021430:2693-2712 | None:intergenic | 60.0% | |
| !! | GGAATGGGATGGGCTGGTCA+AGG | + | tig0021430:4985-5004 | None:intergenic | 60.0% |
| GGGATAGGAATGGGATGGGC+TGG | + | tig0021430:4991-5010 | None:intergenic | 60.0% | |
| GTCCGGTTTCGATCCGGCAG+TGG | - | tig0021430:1821-1840 | Msa1391340:CDS | 65.0% | |
| CTGGTGAGAGTGAGAGGCGG+AGG | + | tig0021430:2051-2070 | None:intergenic | 65.0% | |
| CTCCGCCTCTCACTCTCACC+AGG | - | tig0021430:2049-2068 | Msa1391340:intron | 65.0% | |
| ! | GCTGGGGTCCTCTGGTTCAG+CGG | + | tig0021430:2285-2304 | None:intergenic | 65.0% |
| ! | GGGGTCCTCTGGTTCAGCGG+TGG | + | tig0021430:2282-2301 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021430 | gene | 1709 | 5674 | 1709 | ID=Msa1391340;Name=Msa1391340 |
| tig0021430 | mRNA | 1709 | 5674 | 1709 | ID=Msa1391340-mRNA-1;Parent=Msa1391340;Name=Msa1391340-mRNA-1;_AED=0.14;_eAED=0.14;_QI=90|0.8|1|1|0.8|1|6|0|224 |
| tig0021430 | exon | 1709 | 1736 | 1709 | ID=Msa1391340-mRNA-1:exon:12675;Parent=Msa1391340-mRNA-1 |
| tig0021430 | exon | 1819 | 1868 | 1819 | ID=Msa1391340-mRNA-1:exon:12674;Parent=Msa1391340-mRNA-1 |
| tig0021430 | exon | 4645 | 4686 | 4645 | ID=Msa1391340-mRNA-1:exon:12673;Parent=Msa1391340-mRNA-1 |
| tig0021430 | exon | 4838 | 4913 | 4838 | ID=Msa1391340-mRNA-1:exon:12672;Parent=Msa1391340-mRNA-1 |
| tig0021430 | exon | 5025 | 5185 | 5025 | ID=Msa1391340-mRNA-1:exon:12671;Parent=Msa1391340-mRNA-1 |
| tig0021430 | exon | 5270 | 5674 | 5270 | ID=Msa1391340-mRNA-1:exon:12670;Parent=Msa1391340-mRNA-1 |
| tig0021430 | five_prime_UTR | 5585 | 5674 | 5585 | ID=Msa1391340-mRNA-1:five_prime_utr;Parent=Msa1391340-mRNA-1 |
| tig0021430 | CDS | 5270 | 5584 | 5270 | ID=Msa1391340-mRNA-1:cds;Parent=Msa1391340-mRNA-1 |
| tig0021430 | CDS | 5025 | 5185 | 5025 | ID=Msa1391340-mRNA-1:cds;Parent=Msa1391340-mRNA-1 |
| tig0021430 | CDS | 4838 | 4913 | 4838 | ID=Msa1391340-mRNA-1:cds;Parent=Msa1391340-mRNA-1 |
| tig0021430 | CDS | 4645 | 4686 | 4645 | ID=Msa1391340-mRNA-1:cds;Parent=Msa1391340-mRNA-1 |
| tig0021430 | CDS | 1819 | 1868 | 1819 | ID=Msa1391340-mRNA-1:cds;Parent=Msa1391340-mRNA-1 |
| tig0021430 | CDS | 1709 | 1736 | 1709 | ID=Msa1391340-mRNA-1:cds;Parent=Msa1391340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
