AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1397370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1397370 MtrunA17_Chr1g0176421 89.506 324 2 1 30 321 316 639 0.0 590
Msa1397370 MtrunA17_Chr1g0170281 79.322 295 58 1 30 321 273 567 1.74e-174 496
Msa1397370 MtrunA17_Chr1g0176751 75.427 293 70 1 30 320 279 571 1.12e-161 463
Msa1397370 MtrunA17_Chr1g0200601 73.776 286 75 0 30 315 185 470 3.12e-156 446
Msa1397370 MtrunA17_Chr5g0448721 70.164 305 85 1 19 317 234 538 8.41e-155 445
Msa1397370 MtrunA17_Chr3g0131181 70.833 288 84 0 30 317 184 471 5.79e-153 439
Msa1397370 MtrunA17_Chr7g0267751 72.222 288 80 0 25 312 285 572 5.44e-152 439
Msa1397370 MtrunA17_Chr8g0385341 72.222 288 80 0 30 317 185 472 1.21e-151 435
Msa1397370 MtrunA17_Chr8g0387671 65.493 284 97 1 30 312 221 504 3.58e-136 396
Msa1397370 MtrunA17_Chr4g0074811 62.976 289 106 1 25 312 241 529 2.99e-135 394
Msa1397370 MtrunA17_Chr5g0444171 62.284 289 108 1 25 312 242 530 4.15e-133 389
Msa1397370 MtrunA17_Chr3g0098951 61.824 296 104 2 25 312 234 528 1.95e-131 385
Msa1397370 MtrunA17_Chr5g0397101 63.958 283 100 2 31 312 223 504 4.32e-131 383
Msa1397370 MtrunA17_Chr0c02g0489761 61.972 284 107 1 30 312 233 516 6.92e-131 383
Msa1397370 MtrunA17_Chr5g0441691 60.777 283 110 1 30 311 223 505 1.99e-128 376
Msa1397370 MtrunA17_Chr1g0157131 60.554 289 113 1 25 312 224 512 1.24e-127 374
Msa1397370 MtrunA17_Chr4g0059951 56.849 292 123 3 30 318 228 519 9.30e-113 337
Msa1397370 MtrunA17_Chr7g0242561 54.882 297 131 2 25 318 206 502 1.85e-111 333
Msa1397370 MtrunA17_Chr4g0074791 52.595 289 125 3 25 312 246 523 1.95e-104 315
Msa1397370 MtrunA17_Chr1g0173541 49.655 290 144 2 25 312 202 491 3.38e-104 315
Msa1397370 MtrunA17_Chr7g0257751 51.579 285 136 1 30 312 213 497 3.38e-104 315
Msa1397370 MtrunA17_Chr4g0033371 49.123 285 144 1 29 312 226 510 6.82e-99 301
Msa1397370 MtrunA17_Chr5g0405421 43.046 302 161 3 27 321 253 550 8.28e-84 263
Msa1397370 MtrunA17_Chr7g0267771 57.979 188 70 2 30 217 243 421 1.42e-64 211
Msa1397370 MtrunA17_Chr8g0374701 36.806 288 172 5 31 312 288 571 3.79e-58 196
Msa1397370 MtrunA17_Chr5g0402551 37.500 288 170 5 31 312 294 577 3.11e-57 194
Msa1397370 MtrunA17_Chr4g0045261 35.764 288 175 5 31 312 297 580 6.12e-57 193
Msa1397370 MtrunA17_Chr5g0444191 63.934 122 41 1 30 151 63 181 1.43e-52 172
Msa1397370 MtrunA17_Chr7g0256001 35.069 288 178 4 31 312 301 585 4.38e-52 181
Msa1397370 MtrunA17_Chr7g0276111 32.867 286 178 5 31 308 304 583 6.48e-50 174
Msa1397370 MtrunA17_Chr3g0127571 35.401 274 161 5 31 295 298 564 9.87e-49 171
Msa1397370 MtrunA17_Chr8g0355131 33.019 318 177 7 27 312 195 508 1.24e-40 148
Msa1397370 MtrunA17_Chr1g0203881 55.556 108 48 0 27 134 193 300 7.85e-35 132
Msa1397370 MtrunA17_Chr1g0190131 50.450 111 54 1 30 139 160 270 1.31e-33 124
Msa1397370 MtrunA17_Chr5g0441771 57.692 104 24 1 99 202 18 101 3.99e-31 112
Msa1397370 MtrunA17_Chr3g0132591 45.872 109 59 0 25 133 252 360 2.43e-27 111
Msa1397370 MtrunA17_Chr5g0440931 37.671 146 88 2 169 311 1 146 4.28e-25 98.6
Msa1397370 MtrunA17_Chr3g0093271 37.671 146 88 2 169 311 52 197 5.73e-25 99.8
Msa1397370 MtrunA17_Chr7g0254731 36.986 146 89 2 169 311 1 146 8.34e-25 97.8
Msa1397370 MtrunA17_Chr6g0460211 36.986 146 89 2 169 311 1 146 1.80e-24 97.1
Msa1397370 MtrunA17_Chr1g0188171 37.671 146 88 2 169 311 1 146 7.85e-24 95.1
Msa1397370 MtrunA17_Chr7g0274941 40.351 114 66 1 30 141 169 282 1.50e-23 98.2
Msa1397370 MtrunA17_Chr1g0166281 36.301 146 90 2 169 311 1 146 2.07e-22 91.7
Msa1397370 MtrunA17_Chr5g0441781 51.389 72 34 1 242 312 1 72 2.16e-21 86.7
Msa1397370 MtrunA17_Chr4g0001331 45.283 106 52 3 37 140 180 281 1.63e-20 91.7
Msa1397370 MtrunA17_Chr8g0366401 33.333 150 94 2 173 316 10 159 9.68e-20 84.7
Msa1397370 MtrunA17_Chr1g0185001 32.886 149 90 3 169 311 1 145 2.37e-19 83.2
Msa1397370 MtrunA17_Chr6g0453681 42.857 119 61 4 19 135 160 273 3.62e-18 85.1
Msa1397370 MtrunA17_Chr7g0274101 35.616 146 91 2 169 311 1 146 4.35e-18 79.7
Msa1397370 MtrunA17_Chr3g0132671 36.111 144 74 4 30 171 200 327 5.66e-18 84.3
Msa1397370 MtrunA17_Chr4g0033601 31.973 147 91 3 181 320 6 150 5.92e-18 79.3
Msa1397370 MtrunA17_Chr6g0468751 43.103 116 59 4 19 132 160 270 1.90e-17 82.8
Msa1397370 MtrunA17_Chr2g0333821 40.952 105 56 4 38 140 175 275 2.10e-17 82.4
Msa1397370 MtrunA17_Chr1g0150321 41.176 102 54 3 37 136 173 270 2.10e-17 82.4
Msa1397370 MtrunA17_Chr4g0062221 31.206 141 92 3 176 311 7 147 5.63e-17 77.4
Msa1397370 MtrunA17_Chr2g0329371 32.168 143 90 2 181 316 65 207 7.90e-17 77.8
Msa1397370 MtrunA17_Chr7g0245231 30.405 148 100 2 172 316 22 169 1.21e-16 76.3
Msa1397370 MtrunA17_Chr8g0353621 33.028 109 70 2 26 133 155 261 1.95e-16 77.8
Msa1397370 MtrunA17_Chr7g0244561 37.838 111 63 4 36 144 177 283 3.36e-16 79.0
Msa1397370 MtrunA17_Chr8g0351491 31.818 110 72 2 26 134 161 268 3.41e-16 77.4
Msa1397370 MtrunA17_Chr6g0450921 31.655 139 92 2 181 316 30 168 7.91e-16 73.9
Msa1397370 MtrunA17_Chr4g0008561 34.234 111 70 3 36 144 178 287 8.14e-16 78.2
Msa1397370 MtrunA17_Chr3g0135951 37.692 130 63 7 19 142 291 408 8.81e-16 77.8
Msa1397370 MtrunA17_Chr3g0125381 34.000 100 63 2 36 134 110 207 4.24e-15 73.2
Msa1397370 MtrunA17_Chr3g0140631 33.028 109 70 2 26 133 182 288 4.33e-15 74.7
Msa1397370 MtrunA17_Chr8g0392951 32.353 136 90 1 181 314 25 160 4.84e-15 71.6
Msa1397370 MtrunA17_Chr5g0399911 41.584 101 55 4 36 132 174 274 7.04e-15 74.3
Msa1397370 MtrunA17_Chr4g0069301 39.806 103 56 3 36 136 186 284 7.64e-15 74.7
Msa1397370 MtrunA17_Chr3g0131061 35.294 102 62 3 35 132 158 259 1.10e-14 73.9
Msa1397370 MtrunA17_Chr2g0304111 37.383 107 61 4 36 140 183 285 1.10e-14 74.3
Msa1397370 MtrunA17_Chr5g0398751 29.452 146 98 3 169 311 1 144 1.55e-14 70.1
Msa1397370 MtrunA17_Chr8g0380661 33.962 106 64 4 36 136 156 260 1.81e-14 72.8
Msa1397370 MtrunA17_Chr8g0381821 39.604 101 57 4 36 132 159 259 2.66e-14 72.8
Msa1397370 MtrunA17_Chr2g0277501 35.644 101 61 3 36 132 159 259 2.72e-14 72.8
Msa1397370 MtrunA17_Chr8g0346071 35.000 120 72 3 19 136 158 273 3.41e-14 72.8
Msa1397370 MtrunA17_Chr1g0167311 38.462 104 58 4 36 135 315 416 4.51e-14 72.8
Msa1397370 MtrunA17_Chr2g0299781 36.364 121 63 5 19 134 310 421 6.17e-14 72.4
Msa1397370 MtrunA17_Chr6g0478601 40.426 94 46 3 37 125 301 389 7.65e-14 72.0
Msa1397370 MtrunA17_Chr8g0385281 35.294 102 62 3 35 132 159 260 9.40e-14 71.2
Msa1397370 MtrunA17_Chr4g0063881 34.746 118 71 4 19 134 152 265 1.34e-13 71.2
Msa1397370 MtrunA17_Chr4g0045371 39.216 102 56 4 36 132 178 278 1.48e-13 70.5
Msa1397370 MtrunA17_Chr1g0187581 38.182 110 63 3 36 142 316 423 1.74e-13 70.9
Msa1397370 MtrunA17_Chr8g0351681 31.081 148 91 4 176 312 45 192 2.17e-13 67.8
Msa1397370 MtrunA17_Chr2g0284011 33.981 103 62 3 36 136 171 269 2.24e-13 70.5
Msa1397370 MtrunA17_Chr6g0453671 37.719 114 63 5 26 136 166 274 2.28e-13 70.1
Msa1397370 MtrunA17_Chr3g0123791 37.864 103 56 4 36 132 160 260 3.11e-13 69.7
Msa1397370 MtrunA17_Chr4g0055451 38.235 102 57 4 36 132 160 260 3.14e-13 69.3
Msa1397370 MtrunA17_Chr2g0284031 34.906 106 63 4 33 136 187 288 5.52e-13 69.3
Msa1397370 MtrunA17_Chr5g0432491 33.981 103 62 4 36 136 183 281 5.59e-13 69.3
Msa1397370 MtrunA17_Chr1g0167351 38.393 112 60 5 36 142 310 417 6.39e-13 69.3
Msa1397370 MtrunA17_Chr8g0368681 30.070 143 95 3 174 311 6 148 8.29e-13 65.5
Msa1397370 MtrunA17_Chr5g0426521 35.849 106 54 4 36 132 159 259 8.62e-13 68.2
Msa1397370 MtrunA17_Chr1g0162301 38.235 102 57 4 36 132 179 279 9.91e-13 68.2
Msa1397370 MtrunA17_Chr5g0428981 36.634 101 62 2 23 122 938 1037 1.01e-12 68.9
Msa1397370 MtrunA17_Chr4g0013131 34.545 110 66 4 36 143 171 276 1.14e-12 68.6
Msa1397370 MtrunA17_Chr7g0244521 37.838 111 55 5 36 140 171 273 1.29e-12 68.2
Msa1397370 MtrunA17_Chr1g0205421 35.922 103 60 4 36 136 171 269 1.38e-12 68.2
Msa1397370 MtrunA17_Chr4g0018201 36.190 105 57 3 23 122 934 1033 1.96e-12 68.2
Msa1397370 MtrunA17_Chr8g0374571 38.235 102 57 4 36 132 178 278 2.04e-12 67.4
Msa1397370 MtrunA17_Chr4g0051191 36.364 121 64 6 22 134 303 418 2.12e-12 67.4
Msa1397370 MtrunA17_Chr1g0183651 42.169 83 43 3 36 115 318 398 2.47e-12 67.4
Msa1397370 MtrunA17_Chr7g0256171 28.082 146 100 2 181 321 6 151 2.76e-12 63.9
Msa1397370 MtrunA17_Chr1g0153321 37.864 103 59 3 36 134 308 409 3.16e-12 67.0
Msa1397370 MtrunA17_Chr6g0482731 30.597 134 90 2 181 311 27 160 3.27e-12 63.9
Msa1397370 MtrunA17_Chr7g0245371 30.000 150 88 3 181 314 25 173 4.41e-12 63.9
Msa1397370 MtrunA17_Chr3g0116151 29.412 136 94 1 179 312 5 140 5.20e-12 62.8
Msa1397370 MtrunA17_Chr3g0116141 29.412 136 94 1 179 312 4 139 5.96e-12 62.4
Msa1397370 MtrunA17_Chr3g0115171 33.846 130 75 5 12 134 412 537 6.49e-12 66.2
Msa1397370 MtrunA17_Chr2g0302431 33.010 103 63 3 36 136 180 278 8.31e-12 65.9
Msa1397370 MtrunA17_Chr5g0402661 34.906 106 55 3 36 132 173 273 1.12e-11 65.1
Msa1397370 MtrunA17_Chr7g0260191 33.051 118 72 4 19 134 147 259 1.72e-11 65.1
Msa1397370 MtrunA17_Chr1g0202831 36.842 114 57 7 38 144 572 677 2.64e-11 64.7
Msa1397370 MtrunA17_Chr4g0044961 28.324 173 111 4 146 311 23 189 2.73e-11 62.0
Msa1397370 MtrunA17_Chr5g0432471 33.981 103 62 4 36 136 171 269 2.75e-11 64.3
Msa1397370 MtrunA17_Chr5g0402361 31.915 141 91 2 181 319 49 186 2.87e-11 63.9
Msa1397370 MtrunA17_Chr7g0261491 39.759 83 45 3 36 115 318 398 2.99e-11 64.3
Msa1397370 MtrunA17_Chr8g0338741 31.250 128 80 3 21 147 235 355 3.75e-11 63.5
Msa1397370 MtrunA17_Chr3g0107051 33.010 103 63 4 36 136 180 278 4.00e-11 63.5
Msa1397370 MtrunA17_Chr8g0391691 32.857 140 86 4 174 307 29 166 4.92e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1397370 AT2G38910.1 86.986 292 38 0 30 321 289 580 0.0 534
Msa1397370 AT5G04870.1 81.206 282 53 0 31 312 306 587 8.13e-171 488
Msa1397370 AT3G10660.2 80.142 282 56 0 31 312 342 623 9.57e-170 486
Msa1397370 AT3G10660.1 80.142 282 56 0 31 312 342 623 9.57e-170 486
Msa1397370 AT1G35670.1 72.727 286 78 0 30 315 181 466 1.66e-152 437
Msa1397370 AT4G38230.1 67.974 306 92 1 19 318 18 323 4.54e-152 430
Msa1397370 AT4G09570.1 72.378 286 79 0 30 315 180 465 6.28e-152 436
Msa1397370 AT4G38230.4 67.974 306 92 1 19 318 162 467 9.35e-151 432
Msa1397370 AT4G38230.3 67.974 306 92 1 19 318 162 467 9.35e-151 432
Msa1397370 AT2G17290.1 68.525 305 90 1 19 317 223 527 2.31e-150 433
Msa1397370 AT2G17290.2 68.525 305 90 1 19 317 223 527 2.31e-150 433
Msa1397370 AT4G35310.2 68.852 305 89 1 19 317 235 539 5.07e-150 433
Msa1397370 AT4G35310.1 68.852 305 89 1 19 317 235 539 5.07e-150 433
Msa1397370 AT4G38230.2 67.974 306 92 1 19 318 192 497 6.66e-150 431
Msa1397370 AT5G23580.1 68.551 283 89 0 30 312 177 459 1.90e-144 416
Msa1397370 AT4G04720.2 61.953 297 111 2 25 320 230 525 1.45e-135 395
Msa1397370 AT4G04720.1 61.953 297 111 2 25 320 230 525 1.45e-135 395
Msa1397370 AT1G76040.1 63.066 287 104 2 27 312 26 311 1.17e-134 385
Msa1397370 AT1G76040.4 63.066 287 104 2 27 312 26 311 1.17e-134 385
Msa1397370 AT4G21940.1 61.938 289 108 2 25 312 252 539 1.63e-132 388
Msa1397370 AT4G21940.2 61.938 289 108 2 25 312 252 539 2.92e-132 388
Msa1397370 AT5G19360.1 63.380 284 103 1 30 312 223 506 5.83e-132 386
Msa1397370 AT1G76040.2 61.794 301 111 4 13 312 252 549 6.53e-132 387
Msa1397370 AT4G23650.1 62.676 284 105 1 30 312 233 516 1.83e-131 385
Msa1397370 AT5G12180.1 62.676 284 105 1 30 312 228 511 2.89e-131 384
Msa1397370 AT1G50700.1 61.592 289 110 1 25 312 223 511 8.03e-131 383
Msa1397370 AT3G20410.2 60.900 289 112 1 25 312 241 529 2.68e-129 380
Msa1397370 AT3G20410.1 60.900 289 112 1 25 312 241 529 2.68e-129 380
Msa1397370 AT1G50700.2 56.508 315 110 2 25 312 223 537 1.01e-124 368
Msa1397370 AT1G61950.1 59.516 289 116 1 25 312 249 537 4.66e-124 367
Msa1397370 AT4G04740.4 55.593 295 129 2 27 320 221 514 5.54e-119 352
Msa1397370 AT4G04740.6 55.593 295 129 2 27 320 221 514 5.54e-119 352
Msa1397370 AT4G04740.5 55.593 295 129 2 27 320 221 514 5.54e-119 352
Msa1397370 AT4G04740.3 55.593 295 129 2 27 320 221 514 5.54e-119 352
Msa1397370 AT4G04740.1 55.593 295 129 2 27 320 221 514 5.54e-119 352
Msa1397370 AT4G04740.7 55.593 295 129 2 27 320 221 514 5.54e-119 352
Msa1397370 AT4G21940.3 64.463 242 85 1 25 266 252 492 8.86e-115 341
Msa1397370 AT1G76040.3 63.281 256 91 3 13 268 252 504 6.01e-113 337
Msa1397370 AT1G50700.3 63.636 242 88 0 25 266 223 464 2.76e-112 334
Msa1397370 AT3G51850.1 55.219 297 130 2 25 318 204 500 4.85e-112 335
Msa1397370 AT5G12480.2 54.849 299 119 3 30 318 120 412 4.87e-112 332
Msa1397370 AT4G04740.2 56.410 273 117 2 27 298 221 492 1.42e-111 334
Msa1397370 AT1G74740.1 56.164 292 125 3 30 318 214 505 3.96e-111 333
Msa1397370 AT4G04710.3 55.862 290 119 3 25 313 176 457 7.50e-111 330
Msa1397370 AT4G04710.2 55.862 290 119 3 25 313 190 471 8.91e-111 330
Msa1397370 AT1G18890.1 57.193 285 120 2 30 312 218 502 1.04e-110 332
Msa1397370 AT5G12480.1 55.137 292 116 2 30 312 214 499 1.17e-110 332
Msa1397370 AT4G04710.1 54.882 297 124 3 25 313 190 484 5.38e-110 329
Msa1397370 AT4G04710.4 54.515 299 124 4 25 313 190 486 4.54e-108 324
Msa1397370 AT5G19450.2 53.767 292 120 3 30 312 212 497 1.35e-107 324
Msa1397370 AT5G19450.1 53.767 292 120 3 30 312 212 497 1.35e-107 324
Msa1397370 AT3G57530.1 51.890 291 138 2 30 318 218 508 9.34e-106 319
Msa1397370 AT4G04695.1 53.633 289 132 2 25 312 182 469 3.22e-104 313
Msa1397370 AT3G51850.2 55.556 270 118 1 30 297 209 478 7.10e-104 313
Msa1397370 AT4G04700.1 51.557 289 138 2 25 312 182 469 1.85e-100 304
Msa1397370 AT2G41860.1 51.027 292 140 2 30 318 209 500 4.25e-100 305
Msa1397370 AT2G41860.2 50.877 285 138 1 30 312 209 493 1.78e-99 303
Msa1397370 AT2G35890.2 62.832 226 83 1 27 251 284 509 1.65e-98 300
Msa1397370 AT2G35890.1 62.832 226 83 1 27 251 284 509 1.65e-98 300
Msa1397370 AT2G31500.1 46.758 293 151 2 25 312 216 508 6.51e-94 290
Msa1397370 AT2G17890.1 45.734 293 148 3 27 312 262 550 2.33e-86 270
Msa1397370 AT5G66210.1 44.369 293 152 3 27 312 216 504 1.39e-81 256
Msa1397370 AT5G66210.2 44.369 293 152 3 27 312 216 504 1.39e-81 256
Msa1397370 AT4G36070.1 42.384 302 163 4 27 321 225 522 3.99e-81 256
Msa1397370 AT4G36070.2 42.384 302 163 4 27 321 225 522 6.50e-81 256
Msa1397370 AT3G51850.3 54.762 210 95 0 25 234 204 413 4.03e-79 247
Msa1397370 AT5G66210.3 46.693 257 130 2 27 276 216 472 3.49e-77 244
Msa1397370 AT5G66210.5 46.667 255 129 2 27 274 216 470 8.78e-77 243
Msa1397370 AT3G57530.2 55.051 198 89 0 30 227 218 415 1.04e-76 241
Msa1397370 AT5G66210.6 48.990 198 100 1 27 223 216 413 4.11e-62 204
Msa1397370 AT5G66210.4 48.990 198 100 1 27 223 216 413 4.11e-62 204
Msa1397370 AT3G50530.2 35.570 298 181 6 22 312 329 622 9.33e-58 197
Msa1397370 AT3G50530.1 35.764 288 175 5 31 312 308 591 9.84e-58 196
Msa1397370 AT1G49580.1 33.446 296 188 4 31 320 310 602 4.70e-54 186
Msa1397370 AT2G41140.1 35.417 288 176 5 31 312 283 566 7.24e-54 185
Msa1397370 AT3G56760.1 34.375 288 179 5 31 312 284 567 8.30e-52 180
Msa1397370 AT3G19100.1 35.069 288 177 5 31 312 304 587 9.09e-52 180
Msa1397370 AT2G46700.2 33.333 291 183 4 27 312 118 402 2.00e-47 165
Msa1397370 AT2G46700.3 33.333 291 183 4 27 312 118 402 2.00e-47 165
Msa1397370 AT2G46700.1 33.449 287 180 4 31 312 303 583 7.63e-46 164
Msa1397370 AT3G49370.1 32.404 287 182 5 31 312 302 581 5.76e-43 156
Msa1397370 AT5G24430.1 34.074 270 170 4 31 295 303 569 5.82e-43 156
Msa1397370 AT1G12580.1 53.704 108 50 0 27 134 196 303 2.09e-34 132
Msa1397370 AT1G08650.1 47.368 114 59 1 25 137 164 277 5.72e-32 120
Msa1397370 AT1G12680.1 51.376 109 53 0 25 133 247 355 5.62e-31 121
Msa1397370 AT3G04530.1 49.524 105 52 1 30 133 165 269 1.52e-28 111
Msa1397370 AT1G08650.2 46.667 105 55 1 25 128 164 268 4.20e-27 107
Msa1397370 AT5G21274.1 36.986 146 89 2 169 311 1 146 2.17e-24 97.1
Msa1397370 AT3G43810.1 36.986 146 89 2 169 311 1 146 2.49e-24 97.1
Msa1397370 AT1G66410.1 36.986 146 89 2 169 311 1 146 2.76e-24 96.7
Msa1397370 AT5G37780.1 36.986 146 89 2 169 311 1 146 2.76e-24 96.7
Msa1397370 AT2G27030.3 35.714 154 96 2 169 319 1 154 4.91e-24 97.1
Msa1397370 AT3G43810.2 36.986 146 89 2 169 311 1 146 5.16e-24 97.8
Msa1397370 AT3G56800.1 36.301 146 90 2 169 311 1 146 1.06e-23 95.1
Msa1397370 AT2G41110.1 36.301 146 90 2 169 311 1 146 1.06e-23 95.1
Msa1397370 AT2G27030.1 36.301 146 90 2 169 311 1 146 1.06e-23 95.1
Msa1397370 AT3G59440.1 33.784 148 94 1 176 319 47 194 1.09e-22 94.0
Msa1397370 AT4G14640.1 36.301 146 90 2 173 315 6 151 2.22e-21 89.0
Msa1397370 AT2G41110.2 33.544 158 90 3 169 311 1 158 3.44e-21 89.0
Msa1397370 AT3G22930.1 36.620 142 87 2 173 311 28 169 1.11e-20 87.8
Msa1397370 AT5G37780.2 33.540 161 89 3 169 311 1 161 2.16e-20 86.7
Msa1397370 AT1G66410.2 34.615 156 89 3 169 311 1 156 1.86e-19 84.3
Msa1397370 AT2G43290.1 34.247 146 86 2 181 316 66 211 2.53e-19 85.1
Msa1397370 AT3G03000.1 36.242 149 89 3 173 316 13 160 4.34e-19 83.2
Msa1397370 AT5G37780.3 31.395 172 89 3 169 311 1 172 5.26e-19 83.2
Msa1397370 AT1G05990.1 35.915 142 85 3 181 316 6 147 5.79e-19 82.4
Msa1397370 AT3G50360.1 31.757 148 98 2 173 317 20 167 1.00e-18 82.4
Msa1397370 AT4G37010.1 31.757 148 98 2 173 317 20 167 1.45e-18 82.0
Msa1397370 AT4G37010.2 31.757 148 98 2 173 317 24 171 1.57e-18 82.0
Msa1397370 AT5G37780.4 37.190 121 73 2 194 311 13 133 3.85e-18 79.7
Msa1397370 AT3G01090.3 43.220 118 60 4 19 134 160 272 7.40e-18 84.3
Msa1397370 AT3G01090.1 43.220 118 60 4 19 134 160 272 7.40e-18 84.3
Msa1397370 AT3G01090.2 43.220 118 60 4 19 134 183 295 7.57e-18 84.3
Msa1397370 AT5G39440.1 41.346 104 56 2 30 132 170 269 7.59e-18 84.3
Msa1397370 AT2G25090.1 41.000 100 53 4 37 134 184 279 7.72e-18 84.3
Msa1397370 AT1G30270.3 40.187 107 58 4 36 140 94 196 7.98e-18 83.6
Msa1397370 AT5G25110.1 37.736 106 60 3 37 140 203 304 9.18e-18 84.0
Msa1397370 AT2G41100.7 32.121 165 92 4 167 311 53 217 9.93e-18 82.4
Msa1397370 AT2G41100.6 32.121 165 92 4 167 311 53 217 9.93e-18 82.4
Msa1397370 AT2G41100.3 32.121 165 92 4 167 311 53 217 9.93e-18 82.4
Msa1397370 AT4G03290.1 32.639 144 89 2 181 316 6 149 1.07e-17 79.3
Msa1397370 AT1G30270.1 40.187 107 58 4 36 140 191 293 1.08e-17 84.0
Msa1397370 AT4G14640.2 36.800 125 76 2 194 315 9 133 1.12e-17 78.6
Msa1397370 AT5G10930.1 34.188 117 66 4 37 146 173 285 1.13e-17 83.6
Msa1397370 AT1G30270.2 40.187 107 58 4 36 140 191 293 1.33e-17 83.6
Msa1397370 AT1G45160.2 39.252 107 52 4 36 134 855 956 1.43e-17 84.0
Msa1397370 AT2G41100.4 32.121 165 92 4 167 311 88 252 1.84e-17 82.0
Msa1397370 AT2G41100.4 31.481 162 92 4 169 311 1 162 1.53e-15 76.6
Msa1397370 AT2G41100.1 32.121 165 92 4 167 311 88 252 1.84e-17 82.0
Msa1397370 AT2G41100.1 31.481 162 92 4 169 311 1 162 1.53e-15 76.6
Msa1397370 AT1G45160.1 39.252 107 52 4 36 134 855 956 1.87e-17 83.6
Msa1397370 AT1G32250.1 31.210 157 99 3 169 316 5 161 2.54e-17 78.6
Msa1397370 AT3G29160.3 44.444 108 54 3 30 135 171 274 7.50e-17 80.9
Msa1397370 AT3G43810.4 37.273 110 66 2 205 311 1 110 1.03e-16 75.5
Msa1397370 AT3G43810.3 37.273 110 66 2 205 311 1 110 1.03e-16 75.5
Msa1397370 AT3G29160.1 44.444 108 54 3 30 135 171 274 1.43e-16 80.5
Msa1397370 AT3G29160.2 44.444 108 54 3 30 135 171 274 1.43e-16 80.5
Msa1397370 AT3G10190.1 33.835 133 84 2 183 311 73 205 1.71e-16 77.4
Msa1397370 AT2G45490.1 32.110 109 71 2 26 133 167 273 1.81e-16 78.6
Msa1397370 AT1G66410.4 36.364 110 67 2 205 311 1 110 3.77e-16 73.9
Msa1397370 AT1G66410.3 36.364 110 67 2 205 311 1 110 3.77e-16 73.9
Msa1397370 AT2G41090.1 31.034 145 96 2 169 311 1 143 9.72e-16 74.7
Msa1397370 AT2G30360.1 34.307 137 79 5 36 165 182 314 1.91e-15 77.0
Msa1397370 AT4G30960.1 38.614 101 56 4 36 134 183 279 6.20e-15 75.5
Msa1397370 AT2G25880.2 32.110 109 71 2 26 133 138 244 6.68e-15 73.9
Msa1397370 AT2G25880.1 32.110 109 71 2 26 133 170 276 8.44e-15 73.9
Msa1397370 AT5G62310.1 40.426 94 46 3 36 124 943 1031 8.52e-15 75.9
Msa1397370 AT2G25880.4 32.110 109 71 2 26 133 183 289 9.64e-15 73.9
Msa1397370 AT1G18530.1 31.690 142 92 3 175 311 2 143 1.07e-14 70.9
Msa1397370 AT3G51920.1 30.137 146 99 2 169 311 1 146 1.16e-14 70.9
Msa1397370 AT1G30640.3 39.423 104 56 4 36 134 230 331 2.06e-14 73.9
Msa1397370 AT2G25880.3 32.110 109 71 2 26 133 231 337 2.11e-14 73.6
Msa1397370 AT4G32830.1 33.028 109 70 2 26 133 176 282 2.15e-14 72.8
Msa1397370 AT1G30640.2 40.385 104 55 4 36 134 323 424 2.28e-14 73.9
Msa1397370 AT1G30640.1 40.385 104 55 4 36 134 323 424 2.28e-14 73.9
Msa1397370 AT5G57630.3 27.568 185 118 7 29 202 73 252 2.40e-14 73.2
Msa1397370 AT5G08590.1 33.871 124 77 4 13 132 137 259 2.44e-14 73.2
Msa1397370 AT4G40010.1 39.252 107 57 4 36 136 159 263 2.47e-14 73.2
Msa1397370 AT5G08590.2 33.871 124 77 4 13 132 61 183 2.69e-14 72.4
Msa1397370 AT5G57630.2 27.568 185 118 7 29 202 161 340 4.21e-14 72.8
Msa1397370 AT5G57630.1 27.568 185 118 7 29 202 161 340 4.41e-14 72.8
Msa1397370 AT3G61960.1 35.345 116 70 3 28 141 164 276 5.05e-14 73.2
Msa1397370 AT3G61960.2 35.345 116 70 3 28 141 164 276 5.38e-14 73.2
Msa1397370 AT5G21326.1 38.614 101 56 4 36 134 173 269 5.66e-14 72.8
Msa1397370 AT1G01140.1 37.383 107 61 4 36 140 179 281 7.27e-14 72.4
Msa1397370 AT1G01140.3 37.383 107 61 4 36 140 179 281 7.40e-14 72.4
Msa1397370 AT4G18700.1 35.849 106 62 4 33 136 182 283 7.97e-14 72.4
Msa1397370 AT1G62820.1 29.167 144 97 3 171 311 4 145 1.03e-13 68.2
Msa1397370 AT1G01140.2 36.449 107 64 3 36 140 179 283 1.04e-13 72.0
Msa1397370 AT5G01810.1 34.951 103 61 3 36 136 171 269 1.08e-13 71.6
Msa1397370 AT5G01810.2 34.951 103 61 3 36 136 171 269 1.08e-13 71.6
Msa1397370 AT4G33950.2 39.216 102 56 4 36 132 176 276 1.14e-13 71.2
Msa1397370 AT5G45810.1 35.849 106 62 4 33 136 184 285 1.15e-13 72.0
Msa1397370 AT4G33950.1 36.134 119 69 5 19 132 160 276 1.23e-13 71.2
Msa1397370 AT2G34180.1 39.216 102 56 4 37 136 217 314 1.23e-13 71.6
Msa1397370 AT1G48260.2 40.196 102 53 4 36 134 86 182 1.37e-13 70.9
Msa1397370 AT1G48260.4 40.196 102 53 4 36 134 86 182 1.37e-13 70.9
Msa1397370 AT1G48260.3 40.196 102 53 4 36 134 86 182 1.37e-13 70.9
Msa1397370 AT1G48260.5 40.196 102 53 4 36 134 86 182 1.37e-13 70.9
Msa1397370 AT1G48260.1 40.196 102 53 4 36 134 171 267 1.45e-13 71.2
Msa1397370 AT5G01810.3 34.951 103 61 3 36 136 171 269 1.47e-13 71.2
Msa1397370 AT2G26980.1 39.000 100 55 3 37 134 175 270 2.28e-13 70.5
Msa1397370 AT2G26980.5 39.000 100 55 3 37 134 175 270 2.32e-13 70.9
Msa1397370 AT2G26980.3 39.000 100 55 3 37 134 175 270 2.37e-13 70.9
Msa1397370 AT3G23310.1 40.196 102 54 4 36 132 321 420 2.46e-13 70.9
Msa1397370 AT2G26980.4 39.000 100 55 3 37 134 185 280 2.70e-13 70.5
Msa1397370 AT3G53930.1 33.000 100 64 3 36 133 179 277 3.59e-13 70.5
Msa1397370 AT4G33080.1 35.246 122 64 5 19 134 291 403 3.67e-13 70.5
Msa1397370 AT3G53930.2 33.000 100 64 3 36 133 179 277 3.76e-13 70.5
Msa1397370 AT4G33080.2 35.246 122 64 5 19 134 291 403 3.85e-13 70.5
Msa1397370 AT4G14350.2 38.462 104 57 4 36 134 318 419 4.07e-13 70.5
Msa1397370 AT4G14350.1 38.462 104 57 4 36 134 318 419 4.07e-13 70.5
Msa1397370 AT4G14350.4 38.462 104 57 4 36 134 318 419 4.07e-13 70.5
Msa1397370 AT4G14350.3 38.462 104 57 4 36 134 318 419 4.17e-13 70.1
Msa1397370 AT3G25600.1 30.496 141 93 3 176 311 8 148 4.71e-13 66.6
Msa1397370 AT4G12860.1 32.624 141 90 3 181 316 6 146 4.94e-13 66.2
Msa1397370 AT3G17510.2 35.922 103 58 3 36 135 100 197 6.03e-13 69.3
Msa1397370 AT1G29230.1 39.048 105 52 5 37 136 234 331 6.25e-13 69.7
Msa1397370 AT3G17510.1 35.922 103 58 3 36 135 180 277 6.49e-13 69.3
Msa1397370 AT1G12310.1 27.778 144 99 3 171 311 4 145 6.80e-13 65.9
Msa1397370 AT1G48490.4 38.298 94 48 3 36 124 1012 1100 6.84e-13 70.1
Msa1397370 AT3G17850.1 38.298 94 48 3 36 124 1071 1159 6.90e-13 70.1
Msa1397370 AT1G48490.3 38.298 94 48 3 36 124 1011 1099 7.29e-13 70.1
Msa1397370 AT1G48490.2 38.298 94 48 3 36 124 1011 1099 7.29e-13 70.1
Msa1397370 AT1G48490.1 38.298 94 48 3 36 124 1011 1099 7.29e-13 70.1
Msa1397370 AT5G45820.1 35.922 103 60 4 36 136 171 269 7.29e-13 69.3
Msa1397370 AT5G40030.1 33.571 140 76 5 25 150 333 469 7.63e-13 69.3
Msa1397370 AT1G60940.1 35.294 102 62 3 35 132 158 259 7.78e-13 68.9
Msa1397370 AT1G60940.2 35.294 102 62 3 35 132 158 259 7.78e-13 68.9
Msa1397370 AT1G10940.2 35.294 102 62 3 35 132 166 267 7.84e-13 68.9
Msa1397370 AT5G63650.1 35.294 102 62 3 35 132 158 259 8.18e-13 68.9
Msa1397370 AT1G10940.1 35.294 102 62 3 35 132 158 259 8.61e-13 68.9
Msa1397370 AT1G03920.1 35.577 104 60 4 36 134 335 436 1.05e-12 68.9
Msa1397370 AT1G03920.3 35.577 104 60 4 36 134 335 436 1.05e-12 68.9
Msa1397370 AT2G19400.1 31.148 122 70 4 19 134 302 415 1.08e-12 68.9
Msa1397370 AT1G03920.2 35.577 104 60 4 36 134 222 323 1.38e-12 68.6
Msa1397370 AT3G20830.1 34.286 105 63 2 23 126 231 330 1.43e-12 68.2
Msa1397370 AT1G78290.3 37.864 103 56 5 36 132 159 259 1.54e-12 67.8
Msa1397370 AT1G78290.2 37.864 103 56 5 36 132 159 259 1.54e-12 67.8
Msa1397370 AT2G20470.3 37.143 105 59 4 36 135 321 423 1.54e-12 68.6
Msa1397370 AT3G07490.1 31.293 147 96 3 179 320 4 150 1.77e-12 64.7
Msa1397370 AT2G20470.2 37.143 105 59 4 36 135 321 423 1.87e-12 68.2
Msa1397370 AT2G20470.1 37.143 105 59 4 36 135 321 423 1.87e-12 68.2
Msa1397370 AT5G09890.2 35.833 120 70 4 36 151 304 420 2.11e-12 68.2
Msa1397370 AT5G09890.1 35.833 120 70 4 36 151 304 420 2.21e-12 68.2
Msa1397370 AT3G12690.1 33.043 115 64 4 37 140 410 522 4.05e-12 67.4
Msa1397370 AT3G12690.3 33.043 115 64 4 37 140 410 522 4.05e-12 67.4
Msa1397370 AT3G12690.2 33.043 115 64 4 37 140 410 522 4.05e-12 67.4
Msa1397370 AT5G44460.1 29.714 175 98 6 159 312 5 175 4.18e-12 64.3
Msa1397370 AT2G23030.1 34.653 101 62 3 36 132 159 259 4.26e-12 66.6
Msa1397370 AT1G18210.2 29.104 134 88 4 181 311 24 153 6.26e-12 63.5
Msa1397370 AT1G18210.1 29.104 134 88 4 181 311 24 153 6.26e-12 63.5
Msa1397370 AT4G14640.3 33.333 105 69 1 173 276 6 110 1.36e-11 61.2
Msa1397370 AT1G79250.1 33.010 103 62 3 37 134 381 481 2.35e-11 65.1
Msa1397370 AT1G79250.3 33.010 103 62 3 37 134 381 481 2.35e-11 65.1
Msa1397370 AT1G79250.2 33.010 103 62 3 37 134 381 481 2.35e-11 65.1
Msa1397370 AT1G79250.4 33.010 103 62 3 37 134 381 481 2.35e-11 65.1
Msa1397370 AT3G07980.1 33.000 100 63 2 36 134 179 275 4.34e-11 64.7
Msa1397370 AT3G07980.2 33.000 100 63 2 36 134 179 275 4.40e-11 64.3
Msa1397370 AT5G42380.1 29.412 136 92 2 181 312 50 185 4.46e-11 61.6
Msa1397370 AT1G73630.1 28.148 135 90 4 181 312 21 151 4.57e-11 60.8
Msa1397370 AT3G23000.1 36.364 99 57 4 38 134 187 281 5.67e-11 63.5

Find 147 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGCGACGTCGTCGATTTC+TGG 0.078271 tig0022146:-78875 Msa1397370:five_prime_UTR
TTGGAAAATGCTTGAGCTTC+AGG 0.224319 tig0022146:-75743 Msa1397370:three_prime_UTR
ATCTTTGTCAAAGTAGTTAA+AGG 0.225553 tig0022146:+76237 None:intergenic
CTCTATACATTAATGCAAAT+AGG 0.243929 tig0022146:+75442 None:intergenic
ACTTCAGGAGCAACATAGTA+TGG 0.247958 tig0022146:+77897 None:intergenic
TGTGCTGTCATCCTCTTCTT+AGG 0.247964 tig0022146:+77564 None:intergenic
TTGTTCGAAGAATGCTTATA+AGG 0.248695 tig0022146:-77590 Msa1397370:CDS
CGAGCGAGTTTCTTCTATTC+TGG 0.253286 tig0022146:-75792 Msa1397370:three_prime_UTR
GGCGACGGTGGCTGCGGCGG+CGG 0.255499 tig0022146:-78691 Msa1397370:five_prime_UTR
TTGTAGGCCAAACTGGTTAC+AGG 0.264534 tig0022146:+76177 None:intergenic
TCGAGGGTGGTGGTGGCTGC+AGG 0.277654 tig0022146:+79064 None:intergenic
ATGATGCAAGACACTGATTT+TGG 0.279909 tig0022146:-75911 Msa1397370:CDS
TCAGTGGAGTTCCGCCATTT+TGG 0.298666 tig0022146:-77809 Msa1397370:CDS
AGACATAAATTAAAAGAAAA+AGG 0.300012 tig0022146:-78750 Msa1397370:five_prime_UTR
GTGGTGGTCGGAGGTGGAGG+AGG 0.321009 tig0022146:-78809 Msa1397370:five_prime_UTR
TTCAGGGGACGAAGCATTAA+TGG 0.322311 tig0022146:-75726 Msa1397370:three_prime_UTR
AAATGGGTAAGAGGTATAAA+AGG 0.329136 tig0022146:+75669 None:intergenic
GACGGTGGCTGCGGCGGCGG+CGG 0.332624 tig0022146:-78688 Msa1397370:five_prime_UTR
TCTATACATTAATGCAAATA+GGG 0.332838 tig0022146:+75443 None:intergenic
GCGGAATCAAGCGGTTTATC+AGG 0.356034 tig0022146:+77005 None:intergenic
ATTATGTAAGTGAATGCATT+TGG 0.358966 tig0022146:-75762 Msa1397370:three_prime_UTR
AAGAGTGGGTTCCGTTCTTA+AGG 0.360602 tig0022146:-76560 Msa1397370:CDS
CATCTAGATGATCATCTTGT+AGG 0.364118 tig0022146:+76161 None:intergenic
GCATTCTCACCATCCCAAAA+TGG 0.376211 tig0022146:+77795 None:intergenic
TAGTTCTTCCGTAAAACTTC+AGG 0.381380 tig0022146:+77882 None:intergenic
TTTAACTACTTTGACAAAGA+TGG 0.384347 tig0022146:-76235 Msa1397370:CDS
TATGAATTCACCGTAGTCTA+TGG 0.385309 tig0022146:+76312 None:intergenic
ACGGTGGTGGTGAGGTGATT+GGG 0.389666 tig0022146:+79089 None:intergenic
TTGACGGTGGTGGTCGGAGG+TGG 0.391270 tig0022146:-78815 Msa1397370:five_prime_UTR
TTAAGGATTCTGAAATCAAC+TGG 0.396005 tig0022146:-76543 Msa1397370:CDS
GCGGCGGCGGCGGCCGATGA+GGG 0.399478 tig0022146:-78678 Msa1397370:exon
GATCATCTTGTAGGCCAAAC+TGG 0.400649 tig0022146:+76170 None:intergenic
TTATATATCAAGTCCTCATT+TGG 0.404125 tig0022146:+75818 None:intergenic
TACGGTGGTGGTGAGGTGAT+TGG 0.405899 tig0022146:+79088 None:intergenic
GTGAGTGTTGGATCCGGATT+TGG 0.408714 tig0022146:-78930 Msa1397370:five_prime_UTR
TGGAAAATGCTTGAGCTTCA+GGG 0.412173 tig0022146:-75742 Msa1397370:three_prime_UTR
ACGGTGGTGGTCGGAGGTGG+AGG 0.413213 tig0022146:-78812 Msa1397370:five_prime_UTR
TGGCGACGTCGTCGATTTCT+GGG 0.415537 tig0022146:-78874 Msa1397370:five_prime_UTR
CAAACTGGTTACAGGCTTGT+TGG 0.417427 tig0022146:+76185 None:intergenic
TGTTCGAAGAATGCTTATAA+GGG 0.420545 tig0022146:-77589 Msa1397370:CDS
GTGGTGGTGGCTGCAGGGTA+CGG 0.426963 tig0022146:+79070 None:intergenic
CAACAAGCCTGTAACCAGTT+TGG 0.430633 tig0022146:-76184 Msa1397370:CDS
GATCATGTGCAGGTCATCCT+TGG 0.432927 tig0022146:-77049 Msa1397370:intron
TGAGTTGACAACATGATATT+CGG 0.433025 tig0022146:+75470 None:intergenic
TGTTGTTACTTCTCTCCCTA+TGG 0.434162 tig0022146:-79034 Msa1397370:five_prime_UTR
TGCGGCGGCGGCGGCCGATG+AGG 0.434622 tig0022146:-78679 Msa1397370:exon
CATCCTTGGGTGCAGGTTGG+AGG 0.437720 tig0022146:-77035 Msa1397370:CDS
CCCGAATTCAAAACCAAATC+CGG 0.442704 tig0022146:+78917 None:intergenic
CAAGGGTTCGAGGGTGGTGG+TGG 0.447586 tig0022146:+79057 None:intergenic
GTGGTGGCTGCAGGGTACGG+TGG 0.448489 tig0022146:+79073 None:intergenic
TTAACTACTTTGACAAAGAT+GGG 0.451171 tig0022146:-76234 Msa1397370:CDS
GCGGTTTGAGACTGCGAAGC+TGG 0.457052 tig0022146:+75502 None:intergenic
TCATCTAAACAAGGTTCAAA+AGG 0.474233 tig0022146:-76278 Msa1397370:CDS
TTGTCCGAGGAGGAAATTGC+AGG 0.478454 tig0022146:-76661 Msa1397370:CDS
AGTTTCTAAAAGAAGTGTTA+AGG 0.488203 tig0022146:-75557 Msa1397370:three_prime_UTR
GTGGCTGCAGGGTACGGTGG+TGG 0.489454 tig0022146:+79076 None:intergenic
AAGTCCTGCAATTTCCTCCT+CGG 0.494533 tig0022146:+76657 None:intergenic
GAATGTGATGTATGGAGCGC+TGG 0.498768 tig0022146:-77852 Msa1397370:CDS
AGAAAAGAGAAAGAGACATC+AGG 0.505352 tig0022146:+79011 None:intergenic
ATCATGTGCAGGTCATCCTT+GGG 0.505732 tig0022146:-77048 Msa1397370:intron
TGTGACGGCGACGGTGGCTG+CGG 0.507663 tig0022146:-78697 Msa1397370:five_prime_UTR
CGAGGGTGGTGGTGGCTGCA+GGG 0.507720 tig0022146:+79065 None:intergenic
ACTTCGTGAGGTGCTGCGAT+GGG 0.510946 tig0022146:+78626 None:intergenic
TGCAGGTCATCCTTGGGTGC+AGG 0.514508 tig0022146:-77042 Msa1397370:intron
TTTGCACTTTCAGATATGCT+TGG 0.514900 tig0022146:+77618 None:intergenic
ACGGTCAAGAATGTGATGTA+TGG 0.516411 tig0022146:-77860 Msa1397370:CDS
GGGTTGATGAAGGAAAAGTA+TGG 0.517075 tig0022146:-78658 Msa1397370:CDS
GAAAGAGACATCAGGCCATA+GGG 0.517211 tig0022146:+79019 None:intergenic
CAGGCAGACGTTGATAATAG+TGG 0.517313 tig0022146:-76337 Msa1397370:CDS
AGAAAGAGACATCAGGCCAT+AGG 0.524478 tig0022146:+79018 None:intergenic
CTGTGGTATGTCAGATCTTG+AGG 0.526812 tig0022146:-78966 Msa1397370:five_prime_UTR
GGTCATCCTTGGGTGCAGGT+TGG 0.527086 tig0022146:-77038 Msa1397370:CDS
TTTCCTTCATCAACCCTCAT+CGG 0.528185 tig0022146:+78665 None:intergenic
GGTGGTGAGGTGATTGGGAA+GGG 0.529301 tig0022146:+79094 None:intergenic
TGGATGGTAGAATGATTTCT+CGG 0.530331 tig0022146:-75635 Msa1397370:three_prime_UTR
AAATGTCTCACCTGTGGCAA+TGG 0.530469 tig0022146:+77938 None:intergenic
TACTTCGTGAGGTGCTGCGA+TGG 0.531221 tig0022146:+78625 None:intergenic
GTGATGTTGACGGTGGTGGT+CGG 0.540529 tig0022146:-78821 Msa1397370:five_prime_UTR
GACGGCGACGGTGGCTGCGG+CGG 0.543811 tig0022146:-78694 Msa1397370:five_prime_UTR
ATATTTGAGCAAGTATTGAA+AGG 0.546205 tig0022146:-77669 Msa1397370:CDS
TGGTGGTCGGAGGTGGAGGA+GGG 0.552136 tig0022146:-78808 Msa1397370:five_prime_UTR
CGGCCGATGAGGGTTGATGA+AGG 0.553672 tig0022146:-78668 Msa1397370:exon
TTGACTTTATTTCTGATCCG+TGG 0.553882 tig0022146:-77641 Msa1397370:CDS
ACTCTAGATCTTGCCAAATG+AGG 0.555841 tig0022146:-75831 Msa1397370:three_prime_UTR
TGCAGGGTACGGTGGTGGTG+AGG 0.556058 tig0022146:+79081 None:intergenic
ACACAAGGGTTCGAGGGTGG+TGG 0.557348 tig0022146:+79054 None:intergenic
TGGTGTGATGTTGACGGTGG+TGG 0.559295 tig0022146:-78825 Msa1397370:five_prime_UTR
ATCATTTATATTCTACTCAG+TGG 0.559649 tig0022146:-77825 Msa1397370:CDS
AGTAACAACACAAGGGTTCG+AGG 0.562729 tig0022146:+79047 None:intergenic
TGATTTCTCGGCATGTGAAG+TGG 0.565043 tig0022146:-75623 Msa1397370:three_prime_UTR
GAGACATTTACAGATGTGGT+TGG 0.566661 tig0022146:-77924 Msa1397370:CDS
ACACCTCCAACCTGCACCCA+AGG 0.567162 tig0022146:+77032 None:intergenic
TGCTGAAGAGTGGTGAGTGT+TGG 0.569198 tig0022146:-78942 Msa1397370:five_prime_UTR
CTTTCAGATATGCTTGGCCA+CGG 0.571207 tig0022146:+77624 None:intergenic
GGAAAATGCTTGAGCTTCAG+GGG 0.574082 tig0022146:-75741 Msa1397370:three_prime_UTR
TACTTTGACAAAGATGGGAG+TGG 0.576026 tig0022146:-76229 Msa1397370:CDS
TGCTGAAAATTTGTCCGAGG+AGG 0.576827 tig0022146:-76671 Msa1397370:CDS
TGACGGTGGTGTGATGTTGA+CGG 0.578596 tig0022146:-78831 Msa1397370:five_prime_UTR
TGGTGGTGAGGTGATTGGGA+AGG 0.581814 tig0022146:+79093 None:intergenic
GATTTCAGAATCCTTAAGAA+CGG 0.582268 tig0022146:+76549 None:intergenic
AACCTTGTTTAGATGAAGCA+TGG 0.582578 tig0022146:+76285 None:intergenic
AGAGTGGTGAGTGTTGGATC+CGG 0.582987 tig0022146:-78936 Msa1397370:five_prime_UTR
AGGTGGAGGAGGGAGATGAG+AGG 0.584763 tig0022146:-78798 Msa1397370:five_prime_UTR
TCTGCCGCCGTTGTTGATGA+CGG 0.585025 tig0022146:-78848 Msa1397370:five_prime_UTR
GGCAACAGATAGAGATCCGA+GGG 0.585147 tig0022146:+78988 None:intergenic
TTTCATTTACATACTTCGTG+AGG 0.587366 tig0022146:+78614 None:intergenic
AGGTGAGACATTTACAGATG+TGG 0.595860 tig0022146:-77928 Msa1397370:CDS
CTTCGTGAGGTGCTGCGATG+GGG 0.599910 tig0022146:+78627 None:intergenic
ATGTTGACGGTGGTGGTCGG+AGG 0.601087 tig0022146:-78818 Msa1397370:five_prime_UTR
CTTCAGGAGCAACATAGTAT+GGG 0.604517 tig0022146:+77898 None:intergenic
TAGAGTTTGCTAATGCCTGA+AGG 0.606236 tig0022146:+75848 None:intergenic
GATAAGACTGCGGAATCAAG+CGG 0.608524 tig0022146:+76996 None:intergenic
TCTAAACAAGGTTCAAAAGG+AGG 0.612349 tig0022146:-76275 Msa1397370:CDS
TGATATTCGGCATGAATACG+CGG 0.613224 tig0022146:+75483 None:intergenic
ATTCTCCTCTGAGAGAGAAG+AGG 0.613823 tig0022146:+79123 None:intergenic
AATAGTGGTACCATAGACTA+CGG 0.614703 tig0022146:-76322 Msa1397370:CDS
GGGAGAGAAGTAACAACACA+AGG 0.614919 tig0022146:+79039 None:intergenic
CTCAAGATCTGACATACCAC+AGG 0.618246 tig0022146:+78967 None:intergenic
GTGAACATATGTGACGGCGA+CGG 0.623279 tig0022146:-78706 Msa1397370:five_prime_UTR
AATGTGATGTATGGAGCGCT+GGG 0.634532 tig0022146:-77851 Msa1397370:CDS
ATCTGTAAATGTCTCACCTG+TGG 0.634949 tig0022146:+77932 None:intergenic
GTAACAACACAAGGGTTCGA+GGG 0.636594 tig0022146:+79048 None:intergenic
AAGCATATCTGAAAGTGCAA+AGG 0.638833 tig0022146:-77616 Msa1397370:CDS
AATCAACTGGTTAATGCAAG+CGG 0.643760 tig0022146:-76530 Msa1397370:intron
CACACCACCGTCATCAACAA+CGG 0.644637 tig0022146:+78841 None:intergenic
ATCTTGAGGTTGCTGAAGAG+TGG 0.650221 tig0022146:-78952 Msa1397370:five_prime_UTR
TTCTCACCATCCCAAAATGG+CGG 0.652534 tig0022146:+77798 None:intergenic
TTTGGATCAGAAACTGAACA+AGG 0.652886 tig0022146:-77693 Msa1397370:intron
TTATAAGGGATCCTAAGAAG+AGG 0.653226 tig0022146:-77575 Msa1397370:CDS
AAAATCCTCTTCTCTCTCAG+AGG 0.656035 tig0022146:-79128 Msa1397370:five_prime_UTR
AATTGCTGAAAATTTGTCCG+AGG 0.661348 tig0022146:-76674 Msa1397370:CDS
GTACTGGATACTCACTCGAA+TGG 0.664998 tig0022146:+76929 None:intergenic
AATAGAGTGAACATATGTGA+CGG 0.669747 tig0022146:-78712 Msa1397370:five_prime_UTR
GGATCTCTATCTGTTGCCTG+TGG 0.671813 tig0022146:-78983 Msa1397370:five_prime_UTR
AGCCATGCTTCATCTAAACA+AGG 0.679512 tig0022146:-76287 Msa1397370:CDS
AACATATGTGACGGCGACGG+TGG 0.680190 tig0022146:-78703 Msa1397370:five_prime_UTR
ATGATAGACACAGATAATAG+CGG 0.693651 tig0022146:-76619 Msa1397370:CDS
ACAACACAAGGGTTCGAGGG+TGG 0.694321 tig0022146:+79051 None:intergenic
AGGCAACAGATAGAGATCCG+AGG 0.694667 tig0022146:+78987 None:intergenic
TGGGAGTGGATACATTACAA+AGG 0.697675 tig0022146:-76215 Msa1397370:CDS
TTGGATCAGAAACTGAACAA+GGG 0.713107 tig0022146:-77692 Msa1397370:intron
GCCGCCGTTGTTGATGACGG+TGG 0.717175 tig0022146:-78845 Msa1397370:five_prime_UTR
GGAGAGAAGTAACAACACAA+GGG 0.729325 tig0022146:+79040 None:intergenic
ACCACCGTCATCAACAACGG+CGG 0.729363 tig0022146:+78844 None:intergenic
CGGTGGTGTGATGTTGACGG+TGG 0.740277 tig0022146:-78828 Msa1397370:five_prime_UTR
CTTCAAACGAGATAAGACTG+CGG 0.772215 tig0022146:+76986 None:intergenic
ATGTGATGTATGGAGCGCTG+GGG 0.809999 tig0022146:-77850 Msa1397370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCATTCAAAATATTAATTT+TGG + tig0022146:76058-76077 None:intergenic 10.0%
!! AGACATAAATTAAAAGAAAA+AGG - tig0022146:75771-75790 Msa1397370:three_prime_UTR 15.0%
!!! TTCATATTTTATTAAGTACT+AGG - tig0022146:76187-76206 Msa1397370:CDS 15.0%
!!! TTTTGCATTTTCTTTATTTT+GGG - tig0022146:76525-76544 Msa1397370:intron 15.0%
!!! TTTTAAATGATAAGCATAAT+TGG - tig0022146:77413-77432 Msa1397370:intron 15.0%
!!! TTAGTGATTTTCATTTTATT+TGG - tig0022146:79123-79142 Msa1397370:five_prime_UTR 15.0%
!!! TTCATTTTGTTTTGTTGATT+TGG - tig0022146:75931-75950 Msa1397370:CDS 20.0%
!! TTTCAGTTAGCTAAAATTAA+AGG - tig0022146:76098-76117 Msa1397370:intron 20.0%
!!! TATGAAATTAGCTTTCATTA+TGG + tig0022146:76173-76192 None:intergenic 20.0%
!!! GAAAGAGTTGATTATTATAA+CGG - tig0022146:76263-76282 Msa1397370:CDS 20.0%
!!! AAGATAATTTGTCTTTGATA+TGG + tig0022146:76460-76479 None:intergenic 20.0%
!!! CTTTTGCATTTTCTTTATTT+TGG - tig0022146:76524-76543 Msa1397370:intron 20.0%
!! AAAAGAAAATCTTTCATAAC+AGG + tig0022146:77088-77107 None:intergenic 20.0%
!! AGGTTTAATATACAACTAAA+AGG - tig0022146:77271-77290 Msa1397370:intron 20.0%
!! TAAAAGGAATATGAAATGTA+CGG - tig0022146:77287-77306 Msa1397370:intron 20.0%
!! TCTAATCTTAAAATACTGAT+GGG + tig0022146:77617-77636 None:intergenic 20.0%
!! TTCTAATCTTAAAATACTGA+TGG + tig0022146:77618-77637 None:intergenic 20.0%
!! AAACAATCTAAGAATTTACA+AGG - tig0022146:77656-77675 Msa1397370:CDS 20.0%
!! GAAATTAAATGTTCAAGTAA+TGG + tig0022146:78516-78535 None:intergenic 20.0%
!! TCTATACATTAATGCAAATA+GGG + tig0022146:79081-79100 None:intergenic 20.0%
!!! TGATTTTCATTTTATTTGGT+TGG - tig0022146:79127-79146 Msa1397370:five_prime_UTR 20.0%
!! TTATTATAACGGAGGTTTAT+AGG - tig0022146:76274-76293 Msa1397370:CDS 25.0%
!! TATTATAACGGAGGTTTATA+GGG - tig0022146:76275-76294 Msa1397370:CDS 25.0%
! TTTATGTTGAAAAGAGAAAG+TGG - tig0022146:76314-76333 Msa1397370:CDS 25.0%
! ACAAATTATCTTGATTCACT+AGG - tig0022146:76468-76487 Msa1397370:intron 25.0%
! CAAATTATCTTGATTCACTA+GGG - tig0022146:76469-76488 Msa1397370:intron 25.0%
! ATCATTTATATTCTACTCAG+TGG - tig0022146:76696-76715 Msa1397370:intron 25.0%
!! TTTTATTGTTTGTCCTTAGT+AGG - tig0022146:76761-76780 Msa1397370:intron 25.0%
!!! ATATTTGAGCAAGTATTGAA+AGG - tig0022146:76852-76871 Msa1397370:intron 25.0%
! AAAAGGAATATGAAATGTAC+GGG - tig0022146:77288-77307 Msa1397370:intron 25.0%
!!! TAGAAGTATTGCATATTACA+TGG - tig0022146:77633-77652 Msa1397370:CDS 25.0%
!! AATATTGAACATTTTGCCAA+TGG - tig0022146:77752-77771 Msa1397370:intron 25.0%
!! ATATTGAACATTTTGCCAAT+GGG - tig0022146:77753-77772 Msa1397370:intron 25.0%
! AACACAACATAAAAAGTCTA+GGG + tig0022146:78101-78120 None:intergenic 25.0%
! ATCTTTGTCAAAGTAGTTAA+AGG + tig0022146:78287-78306 None:intergenic 25.0%
! TTTAACTACTTTGACAAAGA+TGG - tig0022146:78286-78305 Msa1397370:intron 25.0%
! TTAACTACTTTGACAAAGAT+GGG - tig0022146:78287-78306 Msa1397370:intron 25.0%
! AAACAGCTTGAGAAAAATTA+CGG - tig0022146:78647-78666 Msa1397370:CDS 25.0%
! TTATATATCAAGTCCTCATT+TGG + tig0022146:78706-78725 None:intergenic 25.0%
! ATTATGTAAGTGAATGCATT+TGG - tig0022146:78759-78778 Msa1397370:five_prime_UTR 25.0%
!!! AGTTTCTAAAAGAAGTGTTA+AGG - tig0022146:78964-78983 Msa1397370:five_prime_UTR 25.0%
! CTCTATACATTAATGCAAAT+AGG + tig0022146:79082-79101 None:intergenic 25.0%
AATAGAGTGAACATATGTGA+CGG - tig0022146:75809-75828 Msa1397370:three_prime_UTR 30.0%
TTTCATTTACATACTTCGTG+AGG + tig0022146:75910-75929 None:intergenic 30.0%
!! TGTTGATTTGGTATCAAACA+AGG - tig0022146:75943-75962 Msa1397370:CDS 30.0%
! AACAAGGCTTTTGATATTGA+AGG - tig0022146:75959-75978 Msa1397370:intron 30.0%
ACGAATACAAGTAATTACTG+GGG + tig0022146:76031-76050 None:intergenic 30.0%
CACGAATACAAGTAATTACT+GGG + tig0022146:76032-76051 None:intergenic 30.0%
ACACGAATACAAGTAATTAC+TGG + tig0022146:76033-76052 None:intergenic 30.0%
! AGAGTTGATTATTATAACGG+AGG - tig0022146:76266-76285 Msa1397370:CDS 30.0%
TGAATATGCTTGCAAATGTA+TGG - tig0022146:76363-76382 Msa1397370:intron 30.0%
GGACAAACAATAAAATCAAG+TGG + tig0022146:76756-76775 None:intergenic 30.0%
AGACATAACTAATCCTACTA+AGG + tig0022146:76777-76796 None:intergenic 30.0%
TTGTTCGAAGAATGCTTATA+AGG - tig0022146:76931-76950 Msa1397370:intron 30.0%
TGTTCGAAGAATGCTTATAA+GGG - tig0022146:76932-76951 Msa1397370:intron 30.0%
! ATTCTTGATGACAGATTATC+TGG - tig0022146:77123-77142 Msa1397370:intron 30.0%
!!! AGAACTTTTTCATTTAACCC+TGG - tig0022146:77203-77222 Msa1397370:intron 30.0%
!!! GAACTTTTTCATTTAACCCT+GGG - tig0022146:77204-77223 Msa1397370:intron 30.0%
!! GGTTCTAGATAATATTTGAC+AGG - tig0022146:77251-77270 Msa1397370:intron 30.0%
AGATATAGGATTCTCAGAAT+TGG - tig0022146:77342-77361 Msa1397370:intron 30.0%
ACTTTCTGTATTATATCCCT+TGG - tig0022146:77819-77838 Msa1397370:CDS 30.0%
ATGATAGACACAGATAATAG+CGG - tig0022146:77902-77921 Msa1397370:CDS 30.0%
ACTCTTGAAGAACTGAAAAA+TGG - tig0022146:77932-77951 Msa1397370:CDS 30.0%
AAAAATGGCTTAGAAAGAGT+GGG - tig0022146:77947-77966 Msa1397370:CDS 30.0%
GATTTCAGAATCCTTAAGAA+CGG + tig0022146:77975-77994 None:intergenic 30.0%
!! TTAAGGATTCTGAAATCAAC+TGG - tig0022146:77978-77997 Msa1397370:intron 30.0%
! ACAGTCATTCATTTTGAACA+AGG + tig0022146:78049-78068 None:intergenic 30.0%
GAACACAACATAAAAAGTCT+AGG + tig0022146:78102-78121 None:intergenic 30.0%
!! TCCTTTCTTCTTTGAAATTC+AGG - tig0022146:78165-78184 Msa1397370:intron 30.0%
TCATCTAAACAAGGTTCAAA+AGG - tig0022146:78243-78262 Msa1397370:intron 30.0%
AAGAAAGAAAGAAGTAGGAA+AGG + tig0022146:78479-78498 None:intergenic 30.0%
! TTGAATTTTGCTCTGTTTTC+AGG - tig0022146:78555-78574 Msa1397370:intron 30.0%
! AAATGGGTAAGAGGTATAAA+AGG + tig0022146:78855-78874 None:intergenic 30.0%
!!! TATACCTCTTACCCATTTTT+TGG - tig0022146:78857-78876 Msa1397370:five_prime_UTR 30.0%
!!! ATACCTCTTACCCATTTTTT+GGG - tig0022146:78858-78877 Msa1397370:five_prime_UTR 30.0%
ATCCATTTACCCCAAAAAAT+GGG + tig0022146:78871-78890 None:intergenic 30.0%
! TGAGTTGACAACATGATATT+CGG + tig0022146:79054-79073 None:intergenic 30.0%
AGAAAAGAGAAAGAGACATC+AGG + tig0022146:75513-75532 None:intergenic 35.0%
!!! TCCGGATTTGGTTTTGAATT+CGG - tig0022146:75603-75622 Msa1397370:three_prime_UTR 35.0%
!!! ATTTGGTTTTGAATTCGGGT+TGG - tig0022146:75608-75627 Msa1397370:three_prime_UTR 35.0%
!!! TTTGGTTTTGAATTCGGGTT+GGG - tig0022146:75609-75628 Msa1397370:three_prime_UTR 35.0%
! GGAATATTTTCAGATTGCCA+TGG - tig0022146:75980-75999 Msa1397370:intron 35.0%
AGTGAAGAAAAAATGTGCCA+TGG + tig0022146:76000-76019 None:intergenic 35.0%
AGAAAAATATCCATTGCCAC+AGG - tig0022146:76573-76592 Msa1397370:CDS 35.0%
! ATGTTGCTCCTGAAGTTTTA+CGG - tig0022146:76631-76650 Msa1397370:CDS 35.0%
TAGTTCTTCCGTAAAACTTC+AGG + tig0022146:76642-76661 None:intergenic 35.0%
! GAAGTTTTACGGAAGAACTA+CGG - tig0022146:76642-76661 Msa1397370:CDS 35.0%
TAGTATGTGCCTAATGTGTT+CGG - tig0022146:76803-76822 Msa1397370:intron 35.0%
ATCCAAATACCGAACACATT+AGG + tig0022146:76815-76834 None:intergenic 35.0%
TTTGGATCAGAAACTGAACA+AGG - tig0022146:76828-76847 Msa1397370:intron 35.0%
TTGGATCAGAAACTGAACAA+GGG - tig0022146:76829-76848 Msa1397370:intron 35.0%
!! TTGACTTTATTTCTGATCCG+TGG - tig0022146:76880-76899 Msa1397370:intron 35.0%
TTTGCACTTTCAGATATGCT+TGG + tig0022146:76906-76925 None:intergenic 35.0%
! AAGCATATCTGAAAGTGCAA+AGG - tig0022146:76905-76924 Msa1397370:intron 35.0%
TTATAAGGGATCCTAAGAAG+AGG - tig0022146:76946-76965 Msa1397370:CDS 35.0%
AACAGGACATATTAGATCTC+TGG + tig0022146:77071-77090 None:intergenic 35.0%
ATGACAGATTATCTGGTTAG+TGG - tig0022146:77130-77149 Msa1397370:intron 35.0%
! TTTTTCATTTAACCCTGGGA+AGG - tig0022146:77208-77227 Msa1397370:intron 35.0%
CTAATTTCATGTTCCGTATG+CGG - tig0022146:77314-77333 Msa1397370:intron 35.0%
TAATTTCATGTTCCGTATGC+GGG - tig0022146:77315-77334 Msa1397370:intron 35.0%
AGTTATGATTGATCATGTGC+AGG - tig0022146:77462-77481 Msa1397370:intron 35.0%
! CTTAAAATACTGATGGGTAC+TGG + tig0022146:77611-77630 None:intergenic 35.0%
AATTGCTGAAAATTTGTCCG+AGG - tig0022146:77847-77866 Msa1397370:CDS 35.0%
GAAAAATGGCTTAGAAAGAG+TGG - tig0022146:77946-77965 Msa1397370:CDS 35.0%
AATCAACTGGTTAATGCAAG+CGG - tig0022146:77991-78010 Msa1397370:intron 35.0%
TGAACAAGGAACTGACAATT+TGG + tig0022146:78035-78054 None:intergenic 35.0%
GCCTGAATTTCAAAGAAGAA+AGG + tig0022146:78169-78188 None:intergenic 35.0%
AATAGTGGTACCATAGACTA+CGG - tig0022146:78199-78218 Msa1397370:intron 35.0%
TATGAATTCACCGTAGTCTA+TGG + tig0022146:78212-78231 None:intergenic 35.0%
! AACCTTGTTTAGATGAAGCA+TGG + tig0022146:78239-78258 None:intergenic 35.0%
TCTAAACAAGGTTCAAAAGG+AGG - tig0022146:78246-78265 Msa1397370:intron 35.0%
CATCTAGATGATCATCTTGT+AGG + tig0022146:78363-78382 None:intergenic 35.0%
TGGGAAAGAAAGAAAGAAGT+AGG + tig0022146:78484-78503 None:intergenic 35.0%
!! CAAGTAATGGATGAAGTGAT+GGG + tig0022146:78503-78522 None:intergenic 35.0%
!! TCAAGTAATGGATGAAGTGA+TGG + tig0022146:78504-78523 None:intergenic 35.0%
!! ATTTTGCTCTGTTTTCAGGA+TGG - tig0022146:78559-78578 Msa1397370:intron 35.0%
!!! ATGATGCAAGACACTGATTT+TGG - tig0022146:78610-78629 Msa1397370:intron 35.0%
!!! AGACACTGATTTTGGCAAAA+AGG - tig0022146:78618-78637 Msa1397370:intron 35.0%
!!! GACACTGATTTTGGCAAAAA+GGG - tig0022146:78619-78638 Msa1397370:intron 35.0%
!!! ACACTGATTTTGGCAAAAAG+GGG - tig0022146:78620-78639 Msa1397370:intron 35.0%
!!! TACCTCTTACCCATTTTTTG+GGG - tig0022146:78859-78878 Msa1397370:five_prime_UTR 35.0%
!!! TACCCATTTTTTGGGGTAAA+TGG - tig0022146:78866-78885 Msa1397370:five_prime_UTR 35.0%
CATCCATTTACCCCAAAAAA+TGG + tig0022146:78872-78891 None:intergenic 35.0%
!!! CATTTTTTGGGGTAAATGGA+TGG - tig0022146:78870-78889 Msa1397370:five_prime_UTR 35.0%
TGGATGGTAGAATGATTTCT+CGG - tig0022146:78886-78905 Msa1397370:five_prime_UTR 35.0%
! AGAAAGACGTGTGTACTTTT+TGG - tig0022146:79100-79119 Msa1397370:five_prime_UTR 35.0%
AAAATCCTCTTCTCTCTCAG+AGG - tig0022146:75393-75412 Msa1397370:three_prime_UTR 40.0%
GGAGAGAAGTAACAACACAA+GGG + tig0022146:75484-75503 None:intergenic 40.0%
! TGTTGTTACTTCTCTCCCTA+TGG - tig0022146:75487-75506 Msa1397370:three_prime_UTR 40.0%
! TCTCTTTCTCTTTTCTCCCT+CGG - tig0022146:75517-75536 Msa1397370:three_prime_UTR 40.0%
CCCGAATTCAAAACCAAATC+CGG + tig0022146:75607-75626 None:intergenic 40.0%
!!! CCGGATTTGGTTTTGAATTC+GGG - tig0022146:75604-75623 Msa1397370:three_prime_UTR 40.0%
TTTCCTTCATCAACCCTCAT+CGG + tig0022146:75859-75878 None:intergenic 40.0%
!! GGGTTGATGAAGGAAAAGTA+TGG - tig0022146:75863-75882 Msa1397370:three_prime_UTR 40.0%
TTTACCACACATGATCAGCT+AGG + tig0022146:76340-76359 None:intergenic 40.0%
TATGCTTGCAAATGTATGGC+AGG - tig0022146:76367-76386 Msa1397370:intron 40.0%
ATGCTTGCAAATGTATGGCA+GGG - tig0022146:76368-76387 Msa1397370:intron 40.0%
ATCTGTAAATGTCTCACCTG+TGG + tig0022146:76592-76611 None:intergenic 40.0%
AGGTGAGACATTTACAGATG+TGG - tig0022146:76593-76612 Msa1397370:CDS 40.0%
GAGACATTTACAGATGTGGT+TGG - tig0022146:76597-76616 Msa1397370:CDS 40.0%
CTTCAGGAGCAACATAGTAT+GGG + tig0022146:76626-76645 None:intergenic 40.0%
ACTTCAGGAGCAACATAGTA+TGG + tig0022146:76627-76646 None:intergenic 40.0%
ACGGTCAAGAATGTGATGTA+TGG - tig0022146:76661-76680 Msa1397370:CDS 40.0%
TGCCTAATGTGTTCGGTATT+TGG - tig0022146:76810-76829 Msa1397370:intron 40.0%
CATACCTCTATGATGCTGAA+TGG - tig0022146:77000-77019 Msa1397370:CDS 40.0%
CTATATCTATCTCCCGCATA+CGG + tig0022146:77330-77349 None:intergenic 40.0%
CTTCAAACGAGATAAGACTG+CGG + tig0022146:77538-77557 None:intergenic 40.0%
ACATAGCAATTGCTTCCCAT+TGG + tig0022146:77771-77790 None:intergenic 40.0%
TCTGTATTATATCCCTTGGC+AGG - tig0022146:77823-77842 Msa1397370:CDS 40.0%
TTTCAGCAATTACCTGCCAA+GGG + tig0022146:77838-77857 None:intergenic 40.0%
! TTTTCAGCAATTACCTGCCA+AGG + tig0022146:77839-77858 None:intergenic 40.0%
GAACTGACAATTTGGATAGC+AGG + tig0022146:78027-78046 None:intergenic 40.0%
AGCCATGCTTCATCTAAACA+AGG - tig0022146:78234-78253 Msa1397370:intron 40.0%
TACTTTGACAAAGATGGGAG+TGG - tig0022146:78292-78311 Msa1397370:intron 40.0%
TGGGAGTGGATACATTACAA+AGG - tig0022146:78306-78325 Msa1397370:intron 40.0%
AGCTGATCGCGATAATGTAA+TGG - tig0022146:78396-78415 Msa1397370:intron 40.0%
AGAAAGAAGTAGGAAAGGAG+AGG + tig0022146:78474-78493 None:intergenic 40.0%
GAAAAATTACGGATGCCTTC+AGG - tig0022146:78658-78677 Msa1397370:CDS 40.0%
!! TAGAGTTTGCTAATGCCTGA+AGG + tig0022146:78676-78695 None:intergenic 40.0%
ACTCTAGATCTTGCCAAATG+AGG - tig0022146:78690-78709 Msa1397370:five_prime_UTR 40.0%
TTGGAAAATGCTTGAGCTTC+AGG - tig0022146:78778-78797 Msa1397370:five_prime_UTR 40.0%
TGGAAAATGCTTGAGCTTCA+GGG - tig0022146:78779-78798 Msa1397370:five_prime_UTR 40.0%
TACCCCAAAAAATGGGTAAG+AGG + tig0022146:78864-78883 None:intergenic 40.0%
TGATATTCGGCATGAATACG+CGG + tig0022146:79041-79060 None:intergenic 40.0%
! ATTCTCCTCTGAGAGAGAAG+AGG + tig0022146:75401-75420 None:intergenic 45.0%
GTAACAACACAAGGGTTCGA+GGG + tig0022146:75476-75495 None:intergenic 45.0%
AGTAACAACACAAGGGTTCG+AGG + tig0022146:75477-75496 None:intergenic 45.0%
GGGAGAGAAGTAACAACACA+AGG + tig0022146:75485-75504 None:intergenic 45.0%
GAAAGAGACATCAGGCCATA+GGG + tig0022146:75505-75524 None:intergenic 45.0%
AGAAAGAGACATCAGGCCAT+AGG + tig0022146:75506-75525 None:intergenic 45.0%
CTCAAGATCTGACATACCAC+AGG + tig0022146:75557-75576 None:intergenic 45.0%
CTGTGGTATGTCAGATCTTG+AGG - tig0022146:75555-75574 Msa1397370:three_prime_UTR 45.0%
ATCTTGAGGTTGCTGAAGAG+TGG - tig0022146:75569-75588 Msa1397370:three_prime_UTR 45.0%
CTAAAATGCACTAACCCTGC+AGG + tig0022146:76394-76413 None:intergenic 45.0%
TTCACTAGGGTGAACTTAGC+TGG - tig0022146:76482-76501 Msa1397370:intron 45.0%
AAATGTCTCACCTGTGGCAA+TGG + tig0022146:76586-76605 None:intergenic 45.0%
! AATGTGATGTATGGAGCGCT+GGG - tig0022146:76670-76689 Msa1397370:CDS 45.0%
TTCTCACCATCCCAAAATGG+CGG + tig0022146:76726-76745 None:intergenic 45.0%
GCATTCTCACCATCCCAAAA+TGG + tig0022146:76729-76748 None:intergenic 45.0%
! TTTGGGATGGTGAGAATGCT+AGG - tig0022146:76730-76749 Msa1397370:intron 45.0%
CTTTCAGATATGCTTGGCCA+CGG + tig0022146:76900-76919 None:intergenic 45.0%
TGTGCTGTCATCCTCTTCTT+AGG + tig0022146:76960-76979 None:intergenic 45.0%
CTAGCCATTCAGCATCATAG+AGG + tig0022146:77007-77026 None:intergenic 45.0%
ATTTAACCCTGGGAAGGATG+AGG - tig0022146:77214-77233 Msa1397370:intron 45.0%
TTTAACCCTGGGAAGGATGA+GGG - tig0022146:77215-77234 Msa1397370:intron 45.0%
CGTATGCGGGAGATAGATAT+AGG - tig0022146:77328-77347 Msa1397370:intron 45.0%
ATCATGTGCAGGTCATCCTT+GGG - tig0022146:77473-77492 Msa1397370:intron 45.0%
GATAAGACTGCGGAATCAAG+CGG + tig0022146:77528-77547 None:intergenic 45.0%
GTACTGGATACTCACTCGAA+TGG + tig0022146:77595-77614 None:intergenic 45.0%
TGCTGAAAATTTGTCCGAGG+AGG - tig0022146:77850-77869 Msa1397370:CDS 45.0%
AAGTCCTGCAATTTCCTCCT+CGG + tig0022146:77867-77886 None:intergenic 45.0%
! AAGAGTGGGTTCCGTTCTTA+AGG - tig0022146:77961-77980 Msa1397370:intron 45.0%
!! CAGGCAGACGTTGATAATAG+TGG - tig0022146:78184-78203 Msa1397370:intron 45.0%
CAAACTGGTTACAGGCTTGT+TGG + tig0022146:78339-78358 None:intergenic 45.0%
CAACAAGCCTGTAACCAGTT+TGG - tig0022146:78337-78356 Msa1397370:intron 45.0%
TTGTAGGCCAAACTGGTTAC+AGG + tig0022146:78347-78366 None:intergenic 45.0%
GATCATCTTGTAGGCCAAAC+TGG + tig0022146:78354-78373 None:intergenic 45.0%
GAAGTAGGAAAGGAGAGGAA+AGG + tig0022146:78469-78488 None:intergenic 45.0%
CGAGCGAGTTTCTTCTATTC+TGG - tig0022146:78729-78748 Msa1397370:five_prime_UTR 45.0%
GGAAAATGCTTGAGCTTCAG+GGG - tig0022146:78780-78799 Msa1397370:five_prime_UTR 45.0%
! TTCAGGGGACGAAGCATTAA+TGG - tig0022146:78795-78814 Msa1397370:five_prime_UTR 45.0%
TGATTTCTCGGCATGTGAAG+TGG - tig0022146:78898-78917 Msa1397370:five_prime_UTR 45.0%
GGCAACAGATAGAGATCCGA+GGG + tig0022146:75536-75555 None:intergenic 50.0%
AGGCAACAGATAGAGATCCG+AGG + tig0022146:75537-75556 None:intergenic 50.0%
GGATCTCTATCTGTTGCCTG+TGG - tig0022146:75538-75557 Msa1397370:three_prime_UTR 50.0%
TGCTGAAGAGTGGTGAGTGT+TGG - tig0022146:75579-75598 Msa1397370:three_prime_UTR 50.0%
!! AGAGTGGTGAGTGTTGGATC+CGG - tig0022146:75585-75604 Msa1397370:three_prime_UTR 50.0%
!! GTGAGTGTTGGATCCGGATT+TGG - tig0022146:75591-75610 Msa1397370:three_prime_UTR 50.0%
!!! GGGTTGGGTTTTGAGTGTGA+GGG - tig0022146:75624-75643 Msa1397370:three_prime_UTR 50.0%
!!! TTGGGTTTTGAGTGTGAGGG+TGG - tig0022146:75627-75646 Msa1397370:three_prime_UTR 50.0%
CACACCACCGTCATCAACAA+CGG + tig0022146:75683-75702 None:intergenic 50.0%
TGACGGTGGTGTGATGTTGA+CGG - tig0022146:75690-75709 Msa1397370:three_prime_UTR 50.0%
GTGAACATATGTGACGGCGA+CGG - tig0022146:75815-75834 Msa1397370:three_prime_UTR 50.0%
TCTTAGTAGACAACCCGCTG+AGG + tig0022146:76236-76255 None:intergenic 50.0%
GAATGTGATGTATGGAGCGC+TGG - tig0022146:76669-76688 Msa1397370:CDS 50.0%
!! ATGTGATGTATGGAGCGCTG+GGG - tig0022146:76671-76690 Msa1397370:CDS 50.0%
! TCAGTGGAGTTCCGCCATTT+TGG - tig0022146:76712-76731 Msa1397370:intron 50.0%
!! CAGTGGAGTTCCGCCATTTT+GGG - tig0022146:76713-76732 Msa1397370:intron 50.0%
TTAACCCTGGGAAGGATGAG+GGG - tig0022146:77216-77235 Msa1397370:intron 50.0%
GATCATGTGCAGGTCATCCT+TGG - tig0022146:77472-77491 Msa1397370:intron 50.0%
GCGGAATCAAGCGGTTTATC+AGG + tig0022146:77519-77538 None:intergenic 50.0%
TTGTCCGAGGAGGAAATTGC+AGG - tig0022146:77860-77879 Msa1397370:CDS 50.0%
GTAGGAAAGGAGAGGAAAGG+AGG + tig0022146:78466-78485 None:intergenic 50.0%
GGTGGTGAGGTGATTGGGAA+GGG + tig0022146:75430-75449 None:intergenic 55.0%
! TGGTGGTGAGGTGATTGGGA+AGG + tig0022146:75431-75450 None:intergenic 55.0%
! ACGGTGGTGGTGAGGTGATT+GGG + tig0022146:75435-75454 None:intergenic 55.0%
! TACGGTGGTGGTGAGGTGAT+TGG + tig0022146:75436-75455 None:intergenic 55.0%
ACAACACAAGGGTTCGAGGG+TGG + tig0022146:75473-75492 None:intergenic 55.0%
!!! CGGGTTGGGTTTTGAGTGTG+AGG - tig0022146:75623-75642 Msa1397370:three_prime_UTR 55.0%
!! TGGCGACGTCGTCGATTTCT+GGG - tig0022146:75647-75666 Msa1397370:three_prime_UTR 55.0%
! TCTGCCGCCGTTGTTGATGA+CGG - tig0022146:75673-75692 Msa1397370:three_prime_UTR 55.0%
ACCACCGTCATCAACAACGG+CGG + tig0022146:75680-75699 None:intergenic 55.0%
TGGTGTGATGTTGACGGTGG+TGG - tig0022146:75696-75715 Msa1397370:three_prime_UTR 55.0%
! GTGATGTTGACGGTGGTGGT+CGG - tig0022146:75700-75719 Msa1397370:three_prime_UTR 55.0%
AACATATGTGACGGCGACGG+TGG - tig0022146:75818-75837 Msa1397370:three_prime_UTR 55.0%
!! ACTTCGTGAGGTGCTGCGAT+GGG + tig0022146:75898-75917 None:intergenic 55.0%
!! TACTTCGTGAGGTGCTGCGA+TGG + tig0022146:75899-75918 None:intergenic 55.0%
CTGCAGAATGCAGACCTCAG+CGG - tig0022146:76219-76238 Msa1397370:CDS 55.0%
TGCAGAATGCAGACCTCAGC+GGG - tig0022146:76220-76239 Msa1397370:CDS 55.0%
GTGGCCTAGCTGATCATGTG+TGG - tig0022146:76333-76352 Msa1397370:CDS 55.0%
AAATGTATGGCAGGGCCTGC+AGG - tig0022146:76376-76395 Msa1397370:intron 55.0%
AATGTATGGCAGGGCCTGCA+GGG - tig0022146:76377-76396 Msa1397370:intron 55.0%
!! GGAGTTCCGCCATTTTGGGA+TGG - tig0022146:76717-76736 Msa1397370:intron 55.0%
TAACCCTGGGAAGGATGAGG+GGG - tig0022146:77217-77236 Msa1397370:intron 55.0%
GATGAGGGGGGAGTAAAGCA+TGG - tig0022146:77230-77249 Msa1397370:intron 55.0%
ACACAAGGGTTCGAGGGTGG+TGG + tig0022146:75470-75489 None:intergenic 60.0%
!! GTGGCGACGTCGTCGATTTC+TGG - tig0022146:75646-75665 Msa1397370:three_prime_UTR 60.0%
CGGTGGTGTGATGTTGACGG+TGG - tig0022146:75693-75712 Msa1397370:three_prime_UTR 60.0%
! ATGTTGACGGTGGTGGTCGG+AGG - tig0022146:75703-75722 Msa1397370:three_prime_UTR 60.0%
AGGTGGAGGAGGGAGATGAG+AGG - tig0022146:75723-75742 Msa1397370:three_prime_UTR 60.0%
!! CGGCCGATGAGGGTTGATGA+AGG - tig0022146:75853-75872 Msa1397370:three_prime_UTR 60.0%
!! CTTCGTGAGGTGCTGCGATG+GGG + tig0022146:75897-75916 None:intergenic 60.0%
AACCCTGGGAAGGATGAGGG+GGG - tig0022146:77218-77237 Msa1397370:intron 60.0%
TGCAGGTCATCCTTGGGTGC+AGG - tig0022146:77479-77498 Msa1397370:intron 60.0%
GGTCATCCTTGGGTGCAGGT+TGG - tig0022146:77483-77502 Msa1397370:intron 60.0%
! CATCCTTGGGTGCAGGTTGG+AGG - tig0022146:77486-77505 Msa1397370:intron 60.0%
ACACCTCCAACCTGCACCCA+AGG + tig0022146:77492-77511 None:intergenic 60.0%
! GCGGTTTGAGACTGCGAAGC+TGG + tig0022146:79022-79041 None:intergenic 60.0%
! TGCAGGGTACGGTGGTGGTG+AGG + tig0022146:75443-75462 None:intergenic 65.0%
!! GTGGTGGTGGCTGCAGGGTA+CGG + tig0022146:75454-75473 None:intergenic 65.0%
! CAAGGGTTCGAGGGTGGTGG+TGG + tig0022146:75467-75486 None:intergenic 65.0%
!! GCCGCCGTTGTTGATGACGG+TGG - tig0022146:75676-75695 Msa1397370:three_prime_UTR 65.0%
! TTGACGGTGGTGGTCGGAGG+TGG - tig0022146:75706-75725 Msa1397370:three_prime_UTR 65.0%
TGGTGGTCGGAGGTGGAGGA+GGG - tig0022146:75713-75732 Msa1397370:three_prime_UTR 65.0%
CTCCCCCCTCATCCTTCCCA+GGG + tig0022146:77223-77242 None:intergenic 65.0%
ACTCCCCCCTCATCCTTCCC+AGG + tig0022146:77224-77243 None:intergenic 65.0%
GTGGCTGCAGGGTACGGTGG+TGG + tig0022146:75448-75467 None:intergenic 70.0%
GTGGTGGCTGCAGGGTACGG+TGG + tig0022146:75451-75470 None:intergenic 70.0%
!! CGAGGGTGGTGGTGGCTGCA+GGG + tig0022146:75459-75478 None:intergenic 70.0%
!! TCGAGGGTGGTGGTGGCTGC+AGG + tig0022146:75460-75479 None:intergenic 70.0%
! ACGGTGGTGGTCGGAGGTGG+AGG - tig0022146:75709-75728 Msa1397370:three_prime_UTR 70.0%
GTGGTGGTCGGAGGTGGAGG+AGG - tig0022146:75712-75731 Msa1397370:three_prime_UTR 70.0%
TGTGACGGCGACGGTGGCTG+CGG - tig0022146:75824-75843 Msa1397370:three_prime_UTR 70.0%
! GACGGCGACGGTGGCTGCGG+CGG - tig0022146:75827-75846 Msa1397370:three_prime_UTR 80.0%
! GGCGACGGTGGCTGCGGCGG+CGG - tig0022146:75830-75849 Msa1397370:three_prime_UTR 85.0%
! GACGGTGGCTGCGGCGGCGG+CGG - tig0022146:75833-75852 Msa1397370:three_prime_UTR 85.0%
! TGCGGCGGCGGCGGCCGATG+AGG - tig0022146:75842-75861 Msa1397370:three_prime_UTR 85.0%
! GCGGCGGCGGCGGCCGATGA+GGG - tig0022146:75843-75862 Msa1397370:three_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
tig0022146 gene 75384 79159 75384 ID=Msa1397370;Name=Msa1397370
tig0022146 mRNA 75384 79159 75384 ID=Msa1397370-mRNA-1;Parent=Msa1397370;Name=Msa1397370-mRNA-1;_AED=0.09;_eAED=0.09;_QI=475|0.83|0.85|1|1|1|7|511|321
tig0022146 exon 75384 75966 75384 ID=Msa1397370-mRNA-1:exon:16031;Parent=Msa1397370-mRNA-1
tig0022146 exon 76132 76356 76132 ID=Msa1397370-mRNA-1:exon:16030;Parent=Msa1397370-mRNA-1
tig0022146 exon 76531 76698 76531 ID=Msa1397370-mRNA-1:exon:16029;Parent=Msa1397370-mRNA-1
tig0022146 exon 76944 77059 76944 ID=Msa1397370-mRNA-1:exon:16028;Parent=Msa1397370-mRNA-1
tig0022146 exon 77553 77705 77553 ID=Msa1397370-mRNA-1:exon:16027;Parent=Msa1397370-mRNA-1
tig0022146 exon 77805 77979 77805 ID=Msa1397370-mRNA-1:exon:16026;Parent=Msa1397370-mRNA-1
tig0022146 exon 78628 79159 78628 ID=Msa1397370-mRNA-1:exon:16025;Parent=Msa1397370-mRNA-1
tig0022146 five_prime_UTR 78685 79159 78685 ID=Msa1397370-mRNA-1:five_prime_utr;Parent=Msa1397370-mRNA-1
tig0022146 CDS 78628 78684 78628 ID=Msa1397370-mRNA-1:cds;Parent=Msa1397370-mRNA-1
tig0022146 CDS 77805 77979 77805 ID=Msa1397370-mRNA-1:cds;Parent=Msa1397370-mRNA-1
tig0022146 CDS 77553 77705 77553 ID=Msa1397370-mRNA-1:cds;Parent=Msa1397370-mRNA-1
tig0022146 CDS 76944 77059 76944 ID=Msa1397370-mRNA-1:cds;Parent=Msa1397370-mRNA-1
tig0022146 CDS 76531 76698 76531 ID=Msa1397370-mRNA-1:cds;Parent=Msa1397370-mRNA-1
tig0022146 CDS 76132 76356 76132 ID=Msa1397370-mRNA-1:cds;Parent=Msa1397370-mRNA-1
tig0022146 CDS 75895 75966 75895 ID=Msa1397370-mRNA-1:cds;Parent=Msa1397370-mRNA-1
tig0022146 three_prime_UTR 75384 75894 75384 ID=Msa1397370-mRNA-1:three_prime_utr;Parent=Msa1397370-mRNA-1
Gene Sequence

>Msa1397370

ATGAGGGTTGATGAAGGAAAAGTATGGATTGTGATCCCCATCGCAGCACCTCACGAATTCAGTTTGAGAAAAATATCCATTGCCACAGGTGAGACATTTACAGATGTGGTTGGAAGCCCATACTATGTTGCTCCTGAAGTTTTACGGAAGAACTACGGTCAAGAATGTGATGTATGGAGCGCTGGGGTGATCATTTATATTCTACTCAGTGGAGTTCCGCCATTTTGGGATGAAACTGAACAAGGGATATTTGAGCAAGTATTGAAAGGAGAGCTTGACTTTATTTCTGATCCGTGGCCAAGCATATCTGAAAGTGCAAAGGATCTTGTTCGAAGAATGCTTATAAGGGATCCTAAGAAGAGGATGACAGCACATGAAGTTCTTTGTCATCCTTGGGTGCAGGTTGGAGGTGTTGCTCCTGATAAACCGCTTGATTCCGCAGTCTTATCTCGTTTGAAGCAATTCTCTGCAATGAACAAGCTCAAAAAAATAGCCATTCGAGTAATTGCTGAAAATTTGTCCGAGGAGGAAATTGCAGGACTTAAAGAAATGTTCAAGATGATAGACACAGATAATAGCGGACAGATCACTCTTGAAGAACTGAAAAATGGCTTAGAAAGAGTGGGTTCCGTTCTTAAGGATTCTGAAATCAACTGGTTAATGCAAGCGGCAGACGTTGATAATAGTGGTACCATAGACTACGGTGAATTCATAGCAGCCATGCTTCATCTAAACAAGGTTCAAAAGGAGGATCATCTATTTGCAGCCTTTAACTACTTTGACAAAGATGGGAGTGGATACATTACAAAGGATGAGCTCCAACAAGCCTGTAACCAGTTTGGCCTACAAGATGATCATCTAGATGATATAATACGTGAAGCTGATCGCGATAATGATGGTCGCATTGACTACAGTGAATTTGTTGCAATGATGCAAGACACTGATTTTGGCAAAAAGGGGCTATAA
Protein sequence

>Msa1397370

MRVDEGKVWIVIPIAAPHEFSLRKISIATGETFTDVVGSPYYVAPEVLRKNYGQECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFISDPWPSISESAKDLVRRMLIRDPKKRMTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAENLSEEEIAGLKEMFKMIDTDNSGQITLEELKNGLERVGSVLKDSEINWLMQAADVDNSGTIDYGEFIAAMLHLNKVQKEDHLFAAFNYFDKDGSGYITKDELQQACNQFGLQDDHLDDIIREADRDNDGRIDYSEFVAMMQDTDFGKKGL*