Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399730 | KEH21308.1 | 95.484 | 310 | 1 | 1 | 1 | 297 | 1 | 310 | 0.0 | 583 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399730 | sp|O48726|RPN13_ARATH | 63.259 | 313 | 81 | 5 | 4 | 296 | 2 | 300 | 7.90e-127 | 366 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399730 | A0A072TWQ5 | 95.484 | 310 | 1 | 1 | 1 | 297 | 1 | 310 | 0.0 | 583 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0573220 | Msa1399730 | 0.850385 | 1.756847e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399730 | MtrunA17_Chr8g0388971 | 93.671 | 316 | 1 | 2 | 1 | 297 | 1 | 316 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399730 | AT2G26590.2 | 63.259 | 313 | 81 | 5 | 4 | 296 | 2 | 300 | 8.03e-128 | 366 |
| Msa1399730 | AT2G26590.3 | 63.259 | 313 | 81 | 5 | 4 | 296 | 2 | 300 | 8.03e-128 | 366 |
| Msa1399730 | AT2G26590.1 | 63.259 | 313 | 81 | 5 | 4 | 296 | 2 | 300 | 8.03e-128 | 366 |
| Msa1399730 | AT2G26590.4 | 61.661 | 313 | 82 | 6 | 4 | 296 | 2 | 296 | 2.46e-121 | 350 |
Find 94 sgRNAs with CRISPR-Local
Find 438 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATATTTCTGCTTGAAAA+AGG | 0.222480 | tig0022394:+40860 | Msa1399730:three_prime_UTR |
| AAATGTCACTAGAGGGAAAA+AGG | 0.228102 | tig0022394:+35011 | Msa1399730:CDS |
| ATCTTCTGGTCCAGTTAAAT+TGG | 0.244685 | tig0022394:+39386 | Msa1399730:CDS |
| TAACATTACCTCTGGTAAAT+AGG | 0.276133 | tig0022394:-39937 | None:intergenic |
| GATCAATATAATTCTTTAAC+TGG | 0.282739 | tig0022394:-41062 | None:intergenic |
| CAGATAGATTTGTCCCAGTT+TGG | 0.317934 | tig0022394:+40203 | Msa1399730:CDS |
| ATGACAGAAAGTTCTTCTTC+TGG | 0.336325 | tig0022394:+37698 | Msa1399730:CDS |
| CGATGTCTCTCAGAAGGTTA+TGG | 0.343372 | tig0022394:+40990 | Msa1399730:three_prime_UTR |
| TACTTGGATCAATTCCAAAC+TGG | 0.345350 | tig0022394:-40217 | None:intergenic |
| TGGAGATCTGCCAATTTAAC+TGG | 0.349597 | tig0022394:-39396 | None:intergenic |
| ACTAGCGATGTAACATCTTC+TGG | 0.352930 | tig0022394:+39372 | Msa1399730:CDS |
| GAGATTATTACCTGGATTGC+AGG | 0.356564 | tig0022394:-34757 | None:intergenic |
| GGCTACTTGGATTCATCCAT+TGG | 0.381548 | tig0022394:-40778 | None:intergenic |
| TGATCTGATATTGCCATTGA+TGG | 0.395309 | tig0022394:+39884 | Msa1399730:CDS |
| ACTAGAAACTTACATTTACT+TGG | 0.408411 | tig0022394:-40233 | None:intergenic |
| GATTAGGTTAATCAAACATC+TGG | 0.417400 | tig0022394:+37646 | Msa1399730:intron |
| GATTACCTCAACAGACCATT+AGG | 0.418595 | tig0022394:+37873 | Msa1399730:CDS |
| ACGAGTCCTTTGCGTGCATC+AGG | 0.422741 | tig0022394:-35040 | None:intergenic |
| GGAATCTAGGCAAGATGATC+AGG | 0.427826 | tig0022394:+40732 | Msa1399730:CDS |
| TCTCCAAGTCTGAGGAATCT+AGG | 0.438245 | tig0022394:+40719 | Msa1399730:CDS |
| AAGTAGCCTGCCAGGCTACT+TGG | 0.438982 | tig0022394:-40791 | None:intergenic |
| GTTGCATCCACACCAAAGTT+CGG | 0.439990 | tig0022394:-39351 | None:intergenic |
| CAATGTTGCTCAATATTCTC+TGG | 0.443937 | tig0022394:-39416 | None:intergenic |
| AATAAGAATAAGAATAAGAC+AGG | 0.445212 | tig0022394:+34486 | Msa1399730:five_prime_UTR |
| GATGTCTCTCAGAAGGTTAT+GGG | 0.446787 | tig0022394:+40991 | Msa1399730:three_prime_UTR |
| CGATGGAAGATGAACTCATC+TGG | 0.449705 | tig0022394:-34726 | None:intergenic |
| TTGCATCCACACCAAAGTTC+GGG | 0.455855 | tig0022394:-39350 | None:intergenic |
| TCGCTGCAGGTACTTCGAAC+AGG | 0.457627 | tig0022394:+40179 | Msa1399730:intron |
| GCTACTTGGATTCATCCATT+GGG | 0.458064 | tig0022394:-40777 | None:intergenic |
| AAAGTTCTTCTTCTGGATGC+AGG | 0.461672 | tig0022394:+37705 | Msa1399730:CDS |
| TTCTATAGATACAAGAAACT+TGG | 0.464123 | tig0022394:+40823 | Msa1399730:three_prime_UTR |
| GCCAAGTGATTACCTTCGTC+AGG | 0.468536 | tig0022394:-39551 | None:intergenic |
| ATCAATGGCAATATCAGATC+AGG | 0.469632 | tig0022394:-39882 | None:intergenic |
| AAGGACTCGTTCGCATTGCT+AGG | 0.470556 | tig0022394:+35053 | Msa1399730:CDS |
| TTAATAAAATTCAAATCTAT+CGG | 0.473747 | tig0022394:+40943 | Msa1399730:three_prime_UTR |
| TACTCAACTCAATTCGATGA+TGG | 0.475185 | tig0022394:-34591 | None:intergenic |
| CTGTTGACAGGAAACTCTCC+TGG | 0.487004 | tig0022394:+34973 | Msa1399730:intron |
| TTGGTCTCCAGAAGATATAT+TGG | 0.495383 | tig0022394:+40032 | Msa1399730:CDS |
| AACAACTCCAATATATCTTC+TGG | 0.501293 | tig0022394:-40039 | None:intergenic |
| AATGGTAACGTCTCCATCAA+TGG | 0.501612 | tig0022394:-39897 | None:intergenic |
| ATTCTATGATGTAGGGTACT+TGG | 0.504079 | tig0022394:+40013 | Msa1399730:intron |
| TTGCCTAGATTCCTCAGACT+TGG | 0.504515 | tig0022394:-40722 | None:intergenic |
| GCTTGAAGTTTCTGAAGATA+CGG | 0.509208 | tig0022394:+39115 | Msa1399730:CDS |
| GTTGGAAAGAGCTGCAAACT+TGG | 0.509813 | tig0022394:+39323 | Msa1399730:intron |
| AACTTGGTTGTCCCGAACTT+TGG | 0.511711 | tig0022394:+39339 | Msa1399730:CDS |
| TTCTCACTAACAGAGCTCCT+TGG | 0.514456 | tig0022394:+39065 | Msa1399730:intron |
| CAGAGAATATTGAGCAACAT+TGG | 0.515670 | tig0022394:+39417 | Msa1399730:CDS |
| AAAGATGAAAGTAGCCTGCC+AGG | 0.515923 | tig0022394:-40799 | None:intergenic |
| CTATATGTCGAGTTGCCATC+CGG | 0.515997 | tig0022394:+41032 | Msa1399730:three_prime_UTR |
| AGCAACATTGGACCTGCTGC+AGG | 0.516938 | tig0022394:+39429 | Msa1399730:CDS |
| TTCTTTAACTGGTATAACTC+CGG | 0.522752 | tig0022394:-41051 | None:intergenic |
| ATTGATGGAGACGTTACCAT+TGG | 0.528804 | tig0022394:+39899 | Msa1399730:CDS |
| ATGAATCCAAGTAGCCTGGC+AGG | 0.537000 | tig0022394:+40785 | Msa1399730:exon |
| ACTTGGATCAATTCCAAACT+GGG | 0.539991 | tig0022394:-40216 | None:intergenic |
| AATAAGAATAAGACAGGGGT+CGG | 0.545213 | tig0022394:+34492 | Msa1399730:five_prime_UTR |
| GAAGCTAGACGCTGCTCCAA+TGG | 0.546492 | tig0022394:-39915 | None:intergenic |
| ATGGATGAATCCAAGTAGCC+TGG | 0.548773 | tig0022394:+40781 | Msa1399730:exon |
| ATCTCAATCTTGTACCCCAA+TGG | 0.549644 | tig0022394:+40762 | Msa1399730:CDS |
| GGTTAATCAAACATCTGGAA+GGG | 0.549885 | tig0022394:+37651 | Msa1399730:intron |
| TTCAGAAACTTCAAGCGGAA+GGG | 0.552715 | tig0022394:-39108 | None:intergenic |
| TCTACTTGCTGACGGAAAGG+TGG | 0.554317 | tig0022394:-40069 | None:intergenic |
| GATTGCAGGAAAAGCGTCGA+TGG | 0.560072 | tig0022394:-34743 | None:intergenic |
| AATCTGAGTGAATAAACAAA+CGG | 0.561314 | tig0022394:+34527 | Msa1399730:five_prime_UTR |
| TGTAACTTATTACCTGCAGC+AGG | 0.562977 | tig0022394:-39441 | None:intergenic |
| CTACTTGCTGACGGAAAGGT+GGG | 0.563809 | tig0022394:-40068 | None:intergenic |
| GAATCTACTTGCTGACGGAA+AGG | 0.566905 | tig0022394:-40072 | None:intergenic |
| CTTCAGAAACTTCAAGCGGA+AGG | 0.572912 | tig0022394:-39109 | None:intergenic |
| TCAAGCGGAAGGGATACATC+AGG | 0.576564 | tig0022394:-39098 | None:intergenic |
| ACTCTCCTGGAGTTTCGTGC+TGG | 0.579564 | tig0022394:+34986 | Msa1399730:CDS |
| TAAAAGAATCTACTTGCTGA+CGG | 0.580735 | tig0022394:-40077 | None:intergenic |
| AACGAAGCGAAGCGAAGCGA+AGG | 0.584236 | tig0022394:-34568 | None:intergenic |
| AGGTTAATCAAACATCTGGA+AGG | 0.590396 | tig0022394:+37650 | Msa1399730:intron |
| TGCTGGTAAAATGTCACTAG+AGG | 0.593216 | tig0022394:+35003 | Msa1399730:CDS |
| AATATCCGATGTCTCTCAGA+AGG | 0.593544 | tig0022394:+40984 | Msa1399730:three_prime_UTR |
| AGCGAAGGTATGTGAAAGTG+AGG | 0.598208 | tig0022394:-34553 | None:intergenic |
| ATTTAATTAGGCTTTGAACT+CGG | 0.598507 | tig0022394:+39846 | Msa1399730:intron |
| TTAACTGGTATAACTCCGGA+TGG | 0.600382 | tig0022394:-41047 | None:intergenic |
| AGGACTCGTTCGCATTGCTA+GGG | 0.600668 | tig0022394:+35054 | Msa1399730:CDS |
| CATAACCTTCTGAGAGACAT+CGG | 0.608094 | tig0022394:-40989 | None:intergenic |
| GCTGGTAAAATGTCACTAGA+GGG | 0.629870 | tig0022394:+35004 | Msa1399730:CDS |
| GTAGTTCCTGATGCACGCAA+AGG | 0.629923 | tig0022394:+35034 | Msa1399730:CDS |
| GGTTGTCCCGAACTTTGGTG+TGG | 0.640547 | tig0022394:+39344 | Msa1399730:CDS |
| TTGAAGATGACATCTCATCC+AGG | 0.641031 | tig0022394:+39138 | Msa1399730:CDS |
| TCTAGCTTCCTATTTACCAG+AGG | 0.641283 | tig0022394:+39929 | Msa1399730:CDS |
| GGATTCTGTCTCCAAGTCTG+AGG | 0.641302 | tig0022394:+40711 | Msa1399730:CDS |
| CTACTTGGATTCATCCATTG+GGG | 0.648704 | tig0022394:-40776 | None:intergenic |
| ACTTACCTAATGGTCTGTTG+AGG | 0.651428 | tig0022394:-37878 | None:intergenic |
| AGCATTCTTGATCCTGACGA+AGG | 0.660593 | tig0022394:+39539 | Msa1399730:CDS |
| GAATAAGACAGGGGTCGGAG+CGG | 0.668790 | tig0022394:+34497 | Msa1399730:five_prime_UTR |
| GCGAAGGTATGTGAAAGTGA+GGG | 0.675280 | tig0022394:-34552 | None:intergenic |
| CATCAGGTTCTTCTTCACCA+AGG | 0.686746 | tig0022394:-39082 | None:intergenic |
| GTATCTTCAGAAACTTCAAG+CGG | 0.690380 | tig0022394:-39113 | None:intergenic |
| ATAAGAATAAGAATAAGACA+GGG | 0.701067 | tig0022394:+34487 | Msa1399730:five_prime_UTR |
| TAAGAATAAGAATAAGACAG+GGG | 0.712361 | tig0022394:+34488 | Msa1399730:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTAGTAACAAAATAA+AGG | - | tig0022394:34678-34697 | None:intergenic | 10.0% |
| !! | TTGTGAAAAAAAATAAAAAT+TGG | - | tig0022394:35945-35964 | None:intergenic | 10.0% |
| !! | TATTAGTAAATGAAATTTAT+AGG | + | tig0022394:36321-36340 | Msa1399730:intron | 10.0% |
| !! | ATTAGTAAATGAAATTTATA+GGG | + | tig0022394:36322-36341 | Msa1399730:intron | 10.0% |
| !! | TATTTACAAGATTATAAATA+AGG | + | tig0022394:38076-38095 | Msa1399730:intron | 10.0% |
| !!! | TTGTAAATAATTTATTTTCA+TGG | + | tig0022394:38609-38628 | Msa1399730:intron | 10.0% |
| !! | TTATAAAAAATATTAGCAAA+AGG | + | tig0022394:39793-39812 | Msa1399730:intron | 10.0% |
| !! | TAAAAATAAACAAAAAATGA+AGG | + | tig0022394:40559-40578 | Msa1399730:intron | 10.0% |
| !!! | TATTTAATTAAGATTTTTCA+AGG | + | tig0022394:40902-40921 | Msa1399730:three_prime_UTR | 10.0% |
| !! | TTAATAAAATTCAAATCTAT+CGG | + | tig0022394:40943-40962 | Msa1399730:three_prime_UTR | 10.0% |
| !! | AACAGCAATTATATATATTT+GGG | - | tig0022394:35314-35333 | None:intergenic | 15.0% |
| !!! | ATTTTGCACAAAAAATTAAT+CGG | - | tig0022394:35455-35474 | None:intergenic | 15.0% |
| !!! | TGAACAATTTTGTTATTTAT+CGG | + | tig0022394:35699-35718 | Msa1399730:intron | 15.0% |
| !! | TTATAACTAGTAAAAACAAA+AGG | + | tig0022394:35812-35831 | Msa1399730:intron | 15.0% |
| !! | TATAACTAGTAAAAACAAAA+GGG | + | tig0022394:35813-35832 | Msa1399730:intron | 15.0% |
| !! | AAAAAAAAAACTTAAACTTC+AGG | - | tig0022394:35853-35872 | None:intergenic | 15.0% |
| !!! | TTTTATTTTTTTTCACAAAG+TGG | + | tig0022394:35947-35966 | Msa1399730:intron | 15.0% |
| !!! | TTTATTTTTTTTCACAAAGT+GGG | + | tig0022394:35948-35967 | Msa1399730:intron | 15.0% |
| !! | TTAGTAAATGAAATTTATAG+GGG | + | tig0022394:36323-36342 | Msa1399730:intron | 15.0% |
| !! | TGAAATGTAAAAAAGAAAAA+GGG | - | tig0022394:40126-40145 | None:intergenic | 15.0% |
| !! | ATGAAATGTAAAAAAGAAAA+AGG | - | tig0022394:40127-40146 | None:intergenic | 15.0% |
| !! | ATCAAAATCAATAACAATTA+AGG | - | tig0022394:40281-40300 | None:intergenic | 15.0% |
| !! | AATAAGAATAAGAATAAGAC+AGG | + | tig0022394:34486-34505 | Msa1399730:five_prime_UTR | 20.0% |
| !! | ATAAGAATAAGAATAAGACA+GGG | + | tig0022394:34487-34506 | Msa1399730:five_prime_UTR | 20.0% |
| !! | TATATATTTGGGAAGAAAAA+AGG | - | tig0022394:35303-35322 | None:intergenic | 20.0% |
| !! | GAACAGCAATTATATATATT+TGG | - | tig0022394:35315-35334 | None:intergenic | 20.0% |
| !! | AGAATCAAAGAAATATATAC+AGG | + | tig0022394:35527-35546 | Msa1399730:intron | 20.0% |
| !! | GAATCAAAGAAATATATACA+GGG | + | tig0022394:35528-35547 | Msa1399730:intron | 20.0% |
| !! | ATCTTTATATAGCAGAAAAT+AGG | + | tig0022394:35566-35585 | Msa1399730:intron | 20.0% |
| !! | TCTTTATATAGCAGAAAATA+GGG | + | tig0022394:35567-35586 | Msa1399730:intron | 20.0% |
| !! | ATAGGGAAATAATATTTGAA+TGG | + | tig0022394:35584-35603 | Msa1399730:intron | 20.0% |
| !!! | GAACAATTTTGTTATTTATC+GGG | + | tig0022394:35700-35719 | Msa1399730:intron | 20.0% |
| !!! | TTTTACTAGTTATAAACCAA+GGG | - | tig0022394:35807-35826 | None:intergenic | 20.0% |
| !!! | TTTTTACTAGTTATAAACCA+AGG | - | tig0022394:35808-35827 | None:intergenic | 20.0% |
| !!! | TTATTTTTTTTCACAAAGTG+GGG | + | tig0022394:35949-35968 | Msa1399730:intron | 20.0% |
| !!! | CAAAATAGATTTGAGATAAA+TGG | - | tig0022394:36032-36051 | None:intergenic | 20.0% |
| !! | CTATGAAAAATAAACACTAA+AGG | - | tig0022394:36357-36376 | None:intergenic | 20.0% |
| !! | CTTATTTATAAAGATAACGT+GGG | + | tig0022394:36443-36462 | Msa1399730:intron | 20.0% |
| !! | AGATCTAAAGATTTATAAGT+TGG | + | tig0022394:37264-37283 | Msa1399730:intron | 20.0% |
| !!! | TTATAAGTTGGATAGAAATA+TGG | + | tig0022394:37276-37295 | Msa1399730:intron | 20.0% |
| !! | CCTAAAAAAAAAAATTGACA+TGG | - | tig0022394:38252-38271 | None:intergenic | 20.0% |
| !!! | CCATGTCAATTTTTTTTTTT+AGG | + | tig0022394:38249-38268 | Msa1399730:intron | 20.0% |
| !!! | TAAAAAGTATTGTCAAATAG+TGG | + | tig0022394:38499-38518 | Msa1399730:intron | 20.0% |
| !!! | AAAGTATTTCCATTTGATTA+TGG | + | tig0022394:38724-38743 | Msa1399730:intron | 20.0% |
| !! | TTCGTTAAAAAATGCATATT+AGG | + | tig0022394:38839-38858 | Msa1399730:intron | 20.0% |
| !! | ATGAATCAAAACCAAATAAA+AGG | - | tig0022394:38938-38957 | None:intergenic | 20.0% |
| !!! | TTTGGATATTCAAATGTTTT+CGG | + | tig0022394:39168-39187 | Msa1399730:intron | 20.0% |
| !!! | CTAAAAGTTTGTTTTTTTGT+TGG | + | tig0022394:39305-39324 | Msa1399730:intron | 20.0% |
| !! | CATATCATCAAAAAAGTAAT+AGG | - | tig0022394:39514-39533 | None:intergenic | 20.0% |
| !!! | AGATTCTTTTACTTATGTAA+AGG | + | tig0022394:40089-40108 | Msa1399730:intron | 20.0% |
| !! | ATTTCATTTCAGAAGATATT+CGG | + | tig0022394:40140-40159 | Msa1399730:intron | 20.0% |
| !! | AAAATCAATAACAATTAAGG+TGG | - | tig0022394:40278-40297 | None:intergenic | 20.0% |
| !! | CTTGAAAAAGGAAAATTTAA+AGG | + | tig0022394:40872-40891 | Msa1399730:three_prime_UTR | 20.0% |
| !! | GATCAATATAATTCTTTAAC+TGG | - | tig0022394:41065-41084 | None:intergenic | 20.0% |
| ! | TAAGAATAAGAATAAGACAG+GGG | + | tig0022394:34488-34507 | Msa1399730:five_prime_UTR | 25.0% |
| ! | AATCTGAGTGAATAAACAAA+CGG | + | tig0022394:34527-34546 | Msa1399730:five_prime_UTR | 25.0% |
| ! | GTAACAAAATAAAGGAGAAA+GGG | - | tig0022394:34670-34689 | None:intergenic | 25.0% |
| ! | AGTAACAAAATAAAGGAGAA+AGG | - | tig0022394:34671-34690 | None:intergenic | 25.0% |
| ! | AAGATAAAGAGATTATTACC+TGG | - | tig0022394:34768-34787 | None:intergenic | 25.0% |
| ! | TTCAACAATGCAAATTCAAA+GGG | - | tig0022394:35136-35155 | None:intergenic | 25.0% |
| !! | ATAATTGCTGTTCATTTGAA+TGG | + | tig0022394:35322-35341 | Msa1399730:intron | 25.0% |
| ! | TAGAATTTGTATAGAATAGC+TGG | + | tig0022394:35428-35447 | Msa1399730:intron | 25.0% |
| ! | GAAATATATACAGGGAAATT+AGG | + | tig0022394:35536-35555 | Msa1399730:intron | 25.0% |
| ! | GGAAATAATATTTGAATGGT+AGG | + | tig0022394:35588-35607 | Msa1399730:intron | 25.0% |
| ! | ACTATAAAACTATGAACCAT+GGG | - | tig0022394:35784-35803 | None:intergenic | 25.0% |
| ! | TTTCAAAAAAGACAAACTTC+AGG | - | tig0022394:35886-35905 | None:intergenic | 25.0% |
| ! | ACCAAAGAAAACTACTATAT+GGG | - | tig0022394:36062-36081 | None:intergenic | 25.0% |
| ! | CCACGTTATCTTTATAAATA+AGG | - | tig0022394:36445-36464 | None:intergenic | 25.0% |
| !! | CCTTATTTATAAAGATAACG+TGG | + | tig0022394:36442-36461 | Msa1399730:intron | 25.0% |
| ! | TTATCATTGTGACATACTAA+AGG | - | tig0022394:36533-36552 | None:intergenic | 25.0% |
| !!! | TACTGAAACAATAGCTTTAT+AGG | - | tig0022394:36577-36596 | None:intergenic | 25.0% |
| ! | AGCTTAATAGCTAACAAATA+TGG | + | tig0022394:36662-36681 | Msa1399730:intron | 25.0% |
| ! | TTACACGGTTTAAATATCTT+GGG | + | tig0022394:36876-36895 | Msa1399730:intron | 25.0% |
| !!! | CGCTTAATTTATTTTCTTGT+TGG | - | tig0022394:37087-37106 | None:intergenic | 25.0% |
| ! | AGGATTATAAATGACAACAT+TGG | + | tig0022394:37157-37176 | Msa1399730:intron | 25.0% |
| ! | ACCTATAGTAGAAAATATTG+TGG | + | tig0022394:37196-37215 | Msa1399730:intron | 25.0% |
| !! | TCCACAATATTTTCTACTAT+AGG | - | tig0022394:37200-37219 | None:intergenic | 25.0% |
| ! | TAGAAAATATTGTGGAAACT+AGG | + | tig0022394:37204-37223 | Msa1399730:intron | 25.0% |
| ! | GGAACAACTAATATTTCAAT+TGG | - | tig0022394:37467-37486 | None:intergenic | 25.0% |
| ! | AGCATCAAAATAAATACAGA+AGG | - | tig0022394:37488-37507 | None:intergenic | 25.0% |
| ! | TGCTTTACTCTTAATATCTT+GGG | + | tig0022394:37575-37594 | Msa1399730:intron | 25.0% |
| !!! | TCTTGGGTATGATTATTTTA+TGG | + | tig0022394:37591-37610 | Msa1399730:intron | 25.0% |
| ! | TCATCAAGTCAAAATACTTA+GGG | - | tig0022394:37761-37780 | None:intergenic | 25.0% |
| ! | ATCATCAAGTCAAAATACTT+AGG | - | tig0022394:37762-37781 | None:intergenic | 25.0% |
| ! | TAGATTCCTATACACAATAA+AGG | - | tig0022394:37815-37834 | None:intergenic | 25.0% |
| ! | TTAATTAATGCAAAGAAGCT+AGG | + | tig0022394:38224-38243 | Msa1399730:intron | 25.0% |
| ! | TAACCAAACAACTTAGTATT+GGG | + | tig0022394:38322-38341 | Msa1399730:intron | 25.0% |
| !!! | TGCATTTTTTAACGAAATCT+AGG | - | tig0022394:38835-38854 | None:intergenic | 25.0% |
| ! | GAAAGCCAAATATATTAGTA+TGG | + | tig0022394:38863-38882 | Msa1399730:intron | 25.0% |
| ! | CGTAACCATACTAATATATT+TGG | - | tig0022394:38871-38890 | None:intergenic | 25.0% |
| ! | TATCTATTTATTTACCTGAC+TGG | + | tig0022394:39279-39298 | Msa1399730:intron | 25.0% |
| !! | CAGTTTTCTTGCATTTAATT+AGG | + | tig0022394:39834-39853 | Msa1399730:intron | 25.0% |
| !!! | ATTTAATTAGGCTTTGAACT+CGG | + | tig0022394:39846-39865 | Msa1399730:intron | 25.0% |
| ! | ATGTAGTATTCTATGATGTA+GGG | + | tig0022394:40006-40025 | Msa1399730:intron | 25.0% |
| ! | ATGTAAAAAAGAAAAAGGGA+GGG | - | tig0022394:40122-40141 | None:intergenic | 25.0% |
| ! | AATGTAAAAAAGAAAAAGGG+AGG | - | tig0022394:40123-40142 | None:intergenic | 25.0% |
| ! | ACTAGAAACTTACATTTACT+TGG | - | tig0022394:40236-40255 | None:intergenic | 25.0% |
| ! | CAAATGGAAAATGTGAATAA+AGG | - | tig0022394:40382-40401 | None:intergenic | 25.0% |
| !! | CTTTATTCACATTTTCCATT+TGG | + | tig0022394:40380-40399 | Msa1399730:intron | 25.0% |
| !!! | TATTTTCTGAGAATTACTAC+TGG | + | tig0022394:40599-40618 | Msa1399730:intron | 25.0% |
| ! | TTCTATAGATACAAGAAACT+TGG | + | tig0022394:40823-40842 | Msa1399730:three_prime_UTR | 25.0% |
| !! | CATATATTTCTGCTTGAAAA+AGG | + | tig0022394:40860-40879 | Msa1399730:three_prime_UTR | 25.0% |
| !! | TGGCTTAAAATTTGACTTGA+AGG | - | tig0022394:34886-34905 | None:intergenic | 30.0% |
| ! | TTCAAGTCAAATTTTAAGCC+AGG | + | tig0022394:34885-34904 | Msa1399730:intron | 30.0% |
| CTTCAACAATGCAAATTCAA+AGG | - | tig0022394:35137-35156 | None:intergenic | 30.0% | |
| !! | AGAACTTGATTTGCAAAAAC+AGG | + | tig0022394:35401-35420 | Msa1399730:intron | 30.0% |
| ! | TCTGTTCTGATTTGTAATGT+AGG | - | tig0022394:35510-35529 | None:intergenic | 30.0% |
| ATATACAGGGAAATTAGGAA+AGG | + | tig0022394:35541-35560 | Msa1399730:intron | 30.0% | |
| TATACAGGGAAATTAGGAAA+GGG | + | tig0022394:35542-35561 | Msa1399730:intron | 30.0% | |
| TATTTGAATGGTAGGAAATG+CGG | + | tig0022394:35596-35615 | Msa1399730:intron | 30.0% | |
| GCTAATAGTGAAAAGATCAA+CGG | + | tig0022394:35632-35651 | Msa1399730:intron | 30.0% | |
| !! | TTTGTTATTTATCGGGATGT+TGG | + | tig0022394:35707-35726 | Msa1399730:intron | 30.0% |
| ACATACCCAAACAACATATT+TGG | + | tig0022394:35741-35760 | Msa1399730:intron | 30.0% | |
| ! | ACGAACCAAATATGTTGTTT+GGG | - | tig0022394:35749-35768 | None:intergenic | 30.0% |
| TACGAACCAAATATGTTGTT+TGG | - | tig0022394:35750-35769 | None:intergenic | 30.0% | |
| ! | CAACATATTTGGTTCGTATT+TGG | + | tig0022394:35752-35771 | Msa1399730:intron | 30.0% |
| GACTATAAAACTATGAACCA+TGG | - | tig0022394:35785-35804 | None:intergenic | 30.0% | |
| !!! | TTCATAGTTTTATAGTCCCT+TGG | + | tig0022394:35788-35807 | Msa1399730:intron | 30.0% |
| ! | TCCCATATAGTAGTTTTCTT+TGG | + | tig0022394:36058-36077 | Msa1399730:intron | 30.0% |
| GACCAAAGAAAACTACTATA+TGG | - | tig0022394:36063-36082 | None:intergenic | 30.0% | |
| ! | TCTACTATGGTGTTTCTAAT+GGG | + | tig0022394:36136-36155 | Msa1399730:intron | 30.0% |
| CTATATGGGTCAAATAGAAT+TGG | + | tig0022394:36250-36269 | Msa1399730:intron | 30.0% | |
| TGTGTGTCTATTATGGATAT+TGG | + | tig0022394:36413-36432 | Msa1399730:intron | 30.0% | |
| !!! | TTGTCTTTTCTAGAACAAAC+TGG | - | tig0022394:36469-36488 | None:intergenic | 30.0% |
| TGTTTCAGTATATTACTTGC+AGG | + | tig0022394:36587-36606 | Msa1399730:intron | 30.0% | |
| TAAACCAAGTTAACCTTTGT+AGG | + | tig0022394:36775-36794 | Msa1399730:intron | 30.0% | |
| TATTTAAACCGTGTAACTTG+TGG | - | tig0022394:36872-36891 | None:intergenic | 30.0% | |
| GTTACACGGTTTAAATATCT+TGG | + | tig0022394:36875-36894 | Msa1399730:intron | 30.0% | |
| TAAACCATGGAATTTAAGCT+GGG | + | tig0022394:36941-36960 | Msa1399730:intron | 30.0% | |
| GTGGTAAAATTAGACAAGAT+AGG | + | tig0022394:37137-37156 | Msa1399730:intron | 30.0% | |
| TGGTATTTGATAGAACACTA+TGG | + | tig0022394:37296-37315 | Msa1399730:intron | 30.0% | |
| AAGTCAAAATAATAGAGGTC+AGG | - | tig0022394:37406-37425 | None:intergenic | 30.0% | |
| !!! | TGACCTCTATTATTTTGACT+TGG | + | tig0022394:37405-37424 | Msa1399730:intron | 30.0% |
| TTGCCAAGTCAAAATAATAG+AGG | - | tig0022394:37411-37430 | None:intergenic | 30.0% | |
| AATATTATCTGATCCTGTGT+TGG | - | tig0022394:37523-37542 | None:intergenic | 30.0% | |
| AGATATTAAGAGTAAAGCAG+TGG | - | tig0022394:37574-37593 | None:intergenic | 30.0% | |
| CTGCTTTACTCTTAATATCT+TGG | + | tig0022394:37574-37593 | Msa1399730:intron | 30.0% | |
| ATATTCTGACTTCTGATTCT+TGG | + | tig0022394:37620-37639 | Msa1399730:intron | 30.0% | |
| ! | TTCTGATTCTTGGTTTGATT+AGG | + | tig0022394:37630-37649 | Msa1399730:intron | 30.0% |
| GATTAGGTTAATCAAACATC+TGG | + | tig0022394:37646-37665 | Msa1399730:intron | 30.0% | |
| AGCTTACAATTCAAAGCAAA+AGG | - | tig0022394:37910-37929 | None:intergenic | 30.0% | |
| CAATTCTGCTTACTTAAGAA+TGG | + | tig0022394:37974-37993 | Msa1399730:intron | 30.0% | |
| CTAACCAAACAACTTAGTAT+TGG | + | tig0022394:38321-38340 | Msa1399730:intron | 30.0% | |
| !!! | ATGGTTTTGAACAACCATTT+AGG | + | tig0022394:38391-38410 | Msa1399730:intron | 30.0% |
| TGCACATTGTTGTCAAATAA+CGG | + | tig0022394:38422-38441 | Msa1399730:intron | 30.0% | |
| ACAAGCAATGTTGTCAATAA+CGG | - | tig0022394:38593-38612 | None:intergenic | 30.0% | |
| GTATTTCCATTTGATTATGG+TGG | + | tig0022394:38727-38746 | Msa1399730:intron | 30.0% | |
| CACTTTAATGACAGAATATG+GGG | - | tig0022394:38753-38772 | None:intergenic | 30.0% | |
| GCACTTTAATGACAGAATAT+GGG | - | tig0022394:38754-38773 | None:intergenic | 30.0% | |
| AGCACTTTAATGACAGAATA+TGG | - | tig0022394:38755-38774 | None:intergenic | 30.0% | |
| TGTGTAAGAGTAAGATCATA+TGG | - | tig0022394:38795-38814 | None:intergenic | 30.0% | |
| ATCTTACTCTTACACATATG+TGG | + | tig0022394:38799-38818 | Msa1399730:intron | 30.0% | |
| !! | ATGACAGAAAATTTTGATGC+TGG | + | tig0022394:38909-38928 | Msa1399730:intron | 30.0% |
| TAGGCAAATAGCTAAATGTA+TGG | + | tig0022394:38987-39006 | Msa1399730:intron | 30.0% | |
| AGATCTCAACACAGTTAAAA+GGG | - | tig0022394:39489-39508 | None:intergenic | 30.0% | |
| ACAGTCTTAATAGATAGCAA+GGG | - | tig0022394:39589-39608 | None:intergenic | 30.0% | |
| TATCTATTAAGACTGTGTGA+TGG | + | tig0022394:39593-39612 | Msa1399730:intron | 30.0% | |
| TAACATTACCTCTGGTAAAT+AGG | - | tig0022394:39940-39959 | None:intergenic | 30.0% | |
| CTACATGAATCACTAAACAA+AGG | - | tig0022394:39992-40011 | None:intergenic | 30.0% | |
| CATGTAGTATTCTATGATGT+AGG | + | tig0022394:40005-40024 | Msa1399730:intron | 30.0% | |
| AACAACTCCAATATATCTTC+TGG | - | tig0022394:40042-40061 | None:intergenic | 30.0% | |
| ! | TAAAAGAATCTACTTGCTGA+CGG | - | tig0022394:40080-40099 | None:intergenic | 30.0% |
| GATTATATATTTATCGCTGC+AGG | + | tig0022394:40166-40185 | Msa1399730:intron | 30.0% | |
| TGGAAAATGTGAATAAAGGT+GGG | - | tig0022394:40378-40397 | None:intergenic | 30.0% | |
| ATGGAAAATGTGAATAAAGG+TGG | - | tig0022394:40379-40398 | None:intergenic | 30.0% | |
| ! | CACATTTTCCATTTGGTATA+CGG | + | tig0022394:40387-40406 | Msa1399730:intron | 30.0% |
| ! | ACAAATTTGCTTTCTAGTAC+TGG | + | tig0022394:40426-40445 | Msa1399730:intron | 30.0% |
| TTGCTAATGAGTACAATACT+TGG | + | tig0022394:40468-40487 | Msa1399730:intron | 30.0% | |
| TTCAAAGTTTCATGTCTTGT+AGG | + | tig0022394:40496-40515 | Msa1399730:intron | 30.0% | |
| AATGAAGGAAAAAAGATACG+AGG | + | tig0022394:40574-40593 | Msa1399730:intron | 30.0% | |
| !!! | ACAAGAAACTTGGTTTTTTG+TGG | + | tig0022394:40833-40852 | Msa1399730:three_prime_UTR | 30.0% |
| TTCTTTAACTGGTATAACTC+CGG | - | tig0022394:41054-41073 | None:intergenic | 30.0% | |
| AATAAGAATAAGACAGGGGT+CGG | + | tig0022394:34492-34511 | Msa1399730:five_prime_UTR | 35.0% | |
| TACTCAACTCAATTCGATGA+TGG | - | tig0022394:34594-34613 | None:intergenic | 35.0% | |
| TAGAGTGCGAAATATGAAGT+TGG | - | tig0022394:34634-34653 | None:intergenic | 35.0% | |
| AACTTCATATTTCGCACTCT+AGG | + | tig0022394:34633-34652 | Msa1399730:intron | 35.0% | |
| ACTTCATATTTCGCACTCTA+GGG | + | tig0022394:34634-34653 | Msa1399730:intron | 35.0% | |
| TGGTTTCAGTAAACTGCAAA+AGG | - | tig0022394:34709-34728 | None:intergenic | 35.0% | |
| AATAAACGCAAAGAGCGAAA+AGG | - | tig0022394:34798-34817 | None:intergenic | 35.0% | |
| ! | TTTTCGCTCTTTGCGTTTAT+TGG | + | tig0022394:34797-34816 | Msa1399730:intron | 35.0% |
| !! | ATTTGACTTGAAGGTTACAG+TGG | - | tig0022394:34877-34896 | None:intergenic | 35.0% |
| ! | AATTTTAAGCCAGGAAGATC+TGG | + | tig0022394:34894-34913 | Msa1399730:intron | 35.0% |
| ! | ATTTTAAGCCAGGAAGATCT+GGG | + | tig0022394:34895-34914 | Msa1399730:intron | 35.0% |
| CTGTCAACAGACATAACAAA+CGG | - | tig0022394:34963-34982 | None:intergenic | 35.0% | |
| AAATGTCACTAGAGGGAAAA+AGG | + | tig0022394:35011-35030 | Msa1399730:CDS | 35.0% | |
| AATGTCACTAGAGGGAAAAA+GGG | + | tig0022394:35012-35031 | Msa1399730:CDS | 35.0% | |
| TCAAAGGGATGTTAAAAGCA+AGG | - | tig0022394:35121-35140 | None:intergenic | 35.0% | |
| !!! | AAGTGGTTGTTTTTGTCTCA+GGG | + | tig0022394:35215-35234 | Msa1399730:intron | 35.0% |
| TGACTCATCGTAGAATTGAT+AGG | + | tig0022394:35374-35393 | Msa1399730:intron | 35.0% | |
| TGTAATGTAGGAGTGGTTAT+AGG | - | tig0022394:35498-35517 | None:intergenic | 35.0% | |
| ! | TCTGATTTGTAATGTAGGAG+TGG | - | tig0022394:35505-35524 | None:intergenic | 35.0% |
| ATACAGGGAAATTAGGAAAG+GGG | + | tig0022394:35543-35562 | Msa1399730:intron | 35.0% | |
| AGATCAACGGTATAGACAAA+AGG | + | tig0022394:35645-35664 | Msa1399730:intron | 35.0% | |
| TATTTATCGGGATGTTGGTA+CGG | + | tig0022394:35712-35731 | Msa1399730:intron | 35.0% | |
| !!! | TTTTTTTCACAAAGTGGGGT+TGG | + | tig0022394:35953-35972 | Msa1399730:intron | 35.0% |
| ! | TAACATGCAACAGAGCATTA+TGG | - | tig0022394:35995-36014 | None:intergenic | 35.0% |
| ! | CTCTACTATGGTGTTTCTAA+TGG | + | tig0022394:36135-36154 | Msa1399730:intron | 35.0% |
| TAAAAGATGGTACTCGTCTT+AGG | - | tig0022394:36186-36205 | None:intergenic | 35.0% | |
| AGCTGCTATGACATAAAAGA+TGG | - | tig0022394:36199-36218 | None:intergenic | 35.0% | |
| TGTGTTTCAAAGGGTAAGTT+GGG | - | tig0022394:36224-36243 | None:intergenic | 35.0% | |
| TAGAGTGAGTGTGTTTCAAA+GGG | - | tig0022394:36233-36252 | None:intergenic | 35.0% | |
| ATAGAGTGAGTGTGTTTCAA+AGG | - | tig0022394:36234-36253 | None:intergenic | 35.0% | |
| TGAAACACACTCACTCTATA+TGG | + | tig0022394:36235-36254 | Msa1399730:intron | 35.0% | |
| GAAACACACTCACTCTATAT+GGG | + | tig0022394:36236-36255 | Msa1399730:intron | 35.0% | |
| AACGAGAGAGAGAGTTAATA+AGG | - | tig0022394:36394-36413 | None:intergenic | 35.0% | |
| TCATTGTGACATACTAAAGG+AGG | - | tig0022394:36530-36549 | None:intergenic | 35.0% | |
| TATATTACTTGCAGGACCTA+TGG | + | tig0022394:36595-36614 | Msa1399730:intron | 35.0% | |
| TGTTAGAAGTGAACAAGTGT+TGG | + | tig0022394:36686-36705 | Msa1399730:intron | 35.0% | |
| GTTAGAAGTGAACAAGTGTT+GGG | + | tig0022394:36687-36706 | Msa1399730:intron | 35.0% | |
| TGTACCTAAATTCACACAGA+AGG | + | tig0022394:36748-36767 | Msa1399730:intron | 35.0% | |
| TATGCCTTCTGTGTGAATTT+AGG | - | tig0022394:36755-36774 | None:intergenic | 35.0% | |
| GTATCCTACAAAGGTTAACT+TGG | - | tig0022394:36782-36801 | None:intergenic | 35.0% | |
| TGTTTGAACGTATCCTACAA+AGG | - | tig0022394:36791-36810 | None:intergenic | 35.0% | |
| GTCATATACCACAAGTTACA+CGG | + | tig0022394:36861-36880 | Msa1399730:intron | 35.0% | |
| CATTCCATAGTGCTAAACAA+CGG | + | tig0022394:36901-36920 | Msa1399730:intron | 35.0% | |
| CTAAACAACGGAGAAATAGA+AGG | + | tig0022394:36913-36932 | Msa1399730:intron | 35.0% | |
| ATAGAAGGAGATGTAAACCA+TGG | + | tig0022394:36928-36947 | Msa1399730:intron | 35.0% | |
| GTAAACCATGGAATTTAAGC+TGG | + | tig0022394:36940-36959 | Msa1399730:intron | 35.0% | |
| ACTGTCTCGTACAACATTAT+CGG | - | tig0022394:37046-37065 | None:intergenic | 35.0% | |
| CAAAGATGAAGATGTTGAGT+TGG | + | tig0022394:37110-37129 | Msa1399730:intron | 35.0% | |
| ATATTGTGGAAACTAGGCTT+AGG | + | tig0022394:37210-37229 | Msa1399730:intron | 35.0% | |
| TCAGATAATATTTCCGAACG+AGG | + | tig0022394:37531-37550 | Msa1399730:intron | 35.0% | |
| AGGTTAATCAAACATCTGGA+AGG | + | tig0022394:37650-37669 | Msa1399730:intron | 35.0% | |
| GGTTAATCAAACATCTGGAA+GGG | + | tig0022394:37651-37670 | Msa1399730:intron | 35.0% | |
| ATGACAGAAAGTTCTTCTTC+TGG | + | tig0022394:37698-37717 | Msa1399730:CDS | 35.0% | |
| AAAATACTTAGGGAGACAAG+TGG | - | tig0022394:37751-37770 | None:intergenic | 35.0% | |
| CCTATACACAATAAAGGTTC+AGG | - | tig0022394:37809-37828 | None:intergenic | 35.0% | |
| CCTGAACCTTTATTGTGTAT+AGG | + | tig0022394:37806-37825 | Msa1399730:intron | 35.0% | |
| AAGGAGAGATACTTACCTAA+TGG | - | tig0022394:37891-37910 | None:intergenic | 35.0% | |
| AGGCTTACACGTTAATAGAA+AGG | - | tig0022394:37934-37953 | None:intergenic | 35.0% | |
| TCTTAAGTAAGCAGAATTGC+AGG | - | tig0022394:37973-37992 | None:intergenic | 35.0% | |
| GTACCCAATACTAAGTTGTT+TGG | - | tig0022394:38328-38347 | None:intergenic | 35.0% | |
| TGGTTGTTCAAAACCATACA+GGG | - | tig0022394:38388-38407 | None:intergenic | 35.0% | |
| ATGGTTGTTCAAAACCATAC+AGG | - | tig0022394:38389-38408 | None:intergenic | 35.0% | |
| TGTGCACAAGTATTCCTAAA+TGG | - | tig0022394:38408-38427 | None:intergenic | 35.0% | |
| ATTAGTATGGTTACGTACAC+AGG | + | tig0022394:38876-38895 | Msa1399730:intron | 35.0% | |
| ! | GATGCTGGTAACCTTTTATT+TGG | + | tig0022394:38924-38943 | Msa1399730:intron | 35.0% |
| !! | TTTGCCTATGTCACTTTGAA+AGG | - | tig0022394:38975-38994 | None:intergenic | 35.0% |
| GTATCTTCAGAAACTTCAAG+CGG | - | tig0022394:39116-39135 | None:intergenic | 35.0% | |
| ! | GCTTGAAGTTTCTGAAGATA+CGG | + | tig0022394:39115-39134 | Msa1399730:CDS | 35.0% |
| GAATATCCAAACTAAGTACC+TGG | - | tig0022394:39159-39178 | None:intergenic | 35.0% | |
| GATATGCAATGCACTAGTAA+GGG | - | tig0022394:39263-39282 | None:intergenic | 35.0% | |
| AGATATGCAATGCACTAGTA+AGG | - | tig0022394:39264-39283 | None:intergenic | 35.0% | |
| ATCTTCTGGTCCAGTTAAAT+TGG | + | tig0022394:39386-39405 | Msa1399730:CDS | 35.0% | |
| CAATGTTGCTCAATATTCTC+TGG | - | tig0022394:39419-39438 | None:intergenic | 35.0% | |
| CAGAGAATATTGAGCAACAT+TGG | + | tig0022394:39417-39436 | Msa1399730:CDS | 35.0% | |
| CAGATCTCAACACAGTTAAA+AGG | - | tig0022394:39490-39509 | None:intergenic | 35.0% | |
| CACAGTCTTAATAGATAGCA+AGG | - | tig0022394:39590-39609 | None:intergenic | 35.0% | |
| AAAACTGTATCCCATGATGA+GGG | + | tig0022394:39727-39746 | Msa1399730:intron | 35.0% | |
| ATCAATGGCAATATCAGATC+AGG | - | tig0022394:39885-39904 | None:intergenic | 35.0% | |
| TGATCTGATATTGCCATTGA+TGG | + | tig0022394:39884-39903 | Msa1399730:CDS | 35.0% | |
| CATTGGTATAACATTACCTC+TGG | - | tig0022394:39948-39967 | None:intergenic | 35.0% | |
| ! | ATTCTATGATGTAGGGTACT+TGG | + | tig0022394:40013-40032 | Msa1399730:intron | 35.0% |
| TTGGTCTCCAGAAGATATAT+TGG | + | tig0022394:40032-40051 | Msa1399730:CDS | 35.0% | |
| ACTTGGATCAATTCCAAACT+GGG | - | tig0022394:40219-40238 | None:intergenic | 35.0% | |
| TACTTGGATCAATTCCAAAC+TGG | - | tig0022394:40220-40239 | None:intergenic | 35.0% | |
| AAAATGTGAATAAAGGTGGG+AGG | - | tig0022394:40375-40394 | None:intergenic | 35.0% | |
| TTTCATGTCTTGTAGGTTTC+AGG | + | tig0022394:40503-40522 | Msa1399730:intron | 35.0% | |
| !! | GTTCACAGTTTTGTCTTTTC+TGG | + | tig0022394:40678-40697 | Msa1399730:CDS | 35.0% |
| AAATATGAAGTTGGAGTCGG+AGG | - | tig0022394:34625-34644 | None:intergenic | 40.0% | |
| GCGAAATATGAAGTTGGAGT+CGG | - | tig0022394:34628-34647 | None:intergenic | 40.0% | |
| AGTAAACTGCAAAAGGAGCA+AGG | - | tig0022394:34702-34721 | None:intergenic | 40.0% | |
| GAGATTATTACCTGGATTGC+AGG | - | tig0022394:34760-34779 | None:intergenic | 40.0% | |
| !! | CGTTTGTTATGTCTGTTGAC+AGG | + | tig0022394:34961-34980 | Msa1399730:intron | 40.0% |
| TGCTGGTAAAATGTCACTAG+AGG | + | tig0022394:35003-35022 | Msa1399730:CDS | 40.0% | |
| GCTGGTAAAATGTCACTAGA+GGG | + | tig0022394:35004-35023 | Msa1399730:CDS | 40.0% | |
| CCACTTCAACTAAAAACCAG+CGG | - | tig0022394:35201-35220 | None:intergenic | 40.0% | |
| !!! | GAAGTGGTTGTTTTTGTCTC+AGG | + | tig0022394:35214-35233 | Msa1399730:intron | 40.0% |
| !!! | AGGGACTAGTTCATTTTCAG+TGG | + | tig0022394:35243-35262 | Msa1399730:CDS | 40.0% |
| ATTTATCGGGATGTTGGTAC+GGG | + | tig0022394:35713-35732 | Msa1399730:intron | 40.0% | |
| ! | CAACAGAGCATTATGGCATA+TGG | - | tig0022394:35988-36007 | None:intergenic | 40.0% |
| TGTTGGATCGGTCAAATAGT+TGG | - | tig0022394:36097-36116 | None:intergenic | 40.0% | |
| AGATGGAGGAAATGTTGGAT+CGG | - | tig0022394:36109-36128 | None:intergenic | 40.0% | |
| ! | TTAGGTGATTCGGAAATGTG+TGG | - | tig0022394:36168-36187 | None:intergenic | 40.0% |
| GTGTTTCAAAGGGTAAGTTG+GGG | - | tig0022394:36223-36242 | None:intergenic | 40.0% | |
| GTGTGTTTCAAAGGGTAAGT+TGG | - | tig0022394:36225-36244 | None:intergenic | 40.0% | |
| CTCTCGTTGTGTGTCTATTA+TGG | + | tig0022394:36406-36425 | Msa1399730:intron | 40.0% | |
| ATACTAAAGGAGGAAAGTGG+AGG | - | tig0022394:36520-36539 | None:intergenic | 40.0% | |
| GACATACTAAAGGAGGAAAG+TGG | - | tig0022394:36523-36542 | None:intergenic | 40.0% | |
| CTGTGTGAATTTAGGTACAG+TGG | - | tig0022394:36747-36766 | None:intergenic | 40.0% | |
| TTCCTGCACTTTGTGAAAGT+TGG | + | tig0022394:36831-36850 | Msa1399730:intron | 40.0% | |
| TTCCAACTTTCACAAAGTGC+AGG | - | tig0022394:36836-36855 | None:intergenic | 40.0% | |
| CGTTGTTTAGCACTATGGAA+TGG | - | tig0022394:36903-36922 | None:intergenic | 40.0% | |
| TTCTCCGTTGTTTAGCACTA+TGG | - | tig0022394:36908-36927 | None:intergenic | 40.0% | |
| AAGCTGGGTGGTTAAAATAG+AGG | + | tig0022394:36956-36975 | Msa1399730:intron | 40.0% | |
| ! | CAGTACTTTTGTGTCACATG+AGG | - | tig0022394:36986-37005 | None:intergenic | 40.0% |
| !! | AAAGTACTGCTCAAGCTGAA+TGG | + | tig0022394:36997-37016 | Msa1399730:intron | 40.0% |
| !! | AAGATGTTGAGTTGGATGTG+TGG | + | tig0022394:37118-37137 | Msa1399730:intron | 40.0% |
| ATGACAACATTGGAGAGAGT+TGG | + | tig0022394:37167-37186 | Msa1399730:intron | 40.0% | |
| TGACAACATTGGAGAGAGTT+GGG | + | tig0022394:37168-37187 | Msa1399730:intron | 40.0% | |
| TGCTCAAAAATAGCCTCGTT+CGG | - | tig0022394:37547-37566 | None:intergenic | 40.0% | |
| AAAGTTCTTCTTCTGGATGC+AGG | + | tig0022394:37705-37724 | Msa1399730:CDS | 40.0% | |
| GATTACCTCAACAGACCATT+AGG | + | tig0022394:37873-37892 | Msa1399730:CDS | 40.0% | |
| ACTTACCTAATGGTCTGTTG+AGG | - | tig0022394:37881-37900 | None:intergenic | 40.0% | |
| ATGTTGTCAATAACGGTCGT+GGG | - | tig0022394:38586-38605 | None:intergenic | 40.0% | |
| AATGTTGTCAATAACGGTCG+TGG | - | tig0022394:38587-38606 | None:intergenic | 40.0% | |
| GCAACCTTTCAAAGTGACAT+AGG | + | tig0022394:38968-38987 | Msa1399730:intron | 40.0% | |
| ! | AGCGTGTTACTCTTTACTTC+TGG | - | tig0022394:39035-39054 | None:intergenic | 40.0% |
| TTCAGAAACTTCAAGCGGAA+GGG | - | tig0022394:39111-39130 | None:intergenic | 40.0% | |
| TTGAAGATGACATCTCATCC+AGG | + | tig0022394:39138-39157 | Msa1399730:CDS | 40.0% | |
| TCTCATCCAGGTACTTAGTT+TGG | + | tig0022394:39150-39169 | Msa1399730:intron | 40.0% | |
| CAATGCACTAGTAAGGGATT+TGG | - | tig0022394:39257-39276 | None:intergenic | 40.0% | |
| ! | CAAACTTTTAGTGTCCAGTC+AGG | - | tig0022394:39296-39315 | None:intergenic | 40.0% |
| ACTAGCGATGTAACATCTTC+TGG | + | tig0022394:39372-39391 | Msa1399730:CDS | 40.0% | |
| TGGAGATCTGCCAATTTAAC+TGG | - | tig0022394:39399-39418 | None:intergenic | 40.0% | |
| TGTAACTTATTACCTGCAGC+AGG | - | tig0022394:39444-39463 | None:intergenic | 40.0% | |
| CAAAACTGTATCCCATGATG+AGG | + | tig0022394:39726-39745 | Msa1399730:intron | 40.0% | |
| AAACTGTATCCCATGATGAG+GGG | + | tig0022394:39728-39747 | Msa1399730:intron | 40.0% | |
| ATACTAATGCCCCTCATCAT+GGG | - | tig0022394:39740-39759 | None:intergenic | 40.0% | |
| GGCATTAGTATGCAGTTTGA+CGG | + | tig0022394:39749-39768 | Msa1399730:intron | 40.0% | |
| GCATTAGTATGCAGTTTGAC+GGG | + | tig0022394:39750-39769 | Msa1399730:intron | 40.0% | |
| ! | AATGGTAACGTCTCCATCAA+TGG | - | tig0022394:39900-39919 | None:intergenic | 40.0% |
| ATTGATGGAGACGTTACCAT+TGG | + | tig0022394:39899-39918 | Msa1399730:CDS | 40.0% | |
| ! | TCTAGCTTCCTATTTACCAG+AGG | + | tig0022394:39929-39948 | Msa1399730:CDS | 40.0% |
| CGAAAAGTCAATCGCTACAT+TGG | - | tig0022394:39965-39984 | None:intergenic | 40.0% | |
| CAGATAGATTTGTCCCAGTT+TGG | + | tig0022394:40203-40222 | Msa1399730:CDS | 40.0% | |
| TCTCCAATCTAGTGTGTTGT+AGG | + | tig0022394:40336-40355 | Msa1399730:intron | 40.0% | |
| CTCCAATCTAGTGTGTTGTA+GGG | + | tig0022394:40337-40356 | Msa1399730:intron | 40.0% | |
| TTCCATTTGGTATACGGTAG+AGG | + | tig0022394:40393-40412 | Msa1399730:intron | 40.0% | |
| ! | TTTGCTTTCTAGTACTGGAG+TGG | + | tig0022394:40431-40450 | Msa1399730:intron | 40.0% |
| !!! | CTGATTCTTTGTTTTCCCCT+TGG | + | tig0022394:40648-40667 | Msa1399730:intron | 40.0% |
| !! | CACAGTTTTGTCTTTTCTGG+AGG | + | tig0022394:40681-40700 | Msa1399730:CDS | 40.0% |
| ATCTCAATCTTGTACCCCAA+TGG | + | tig0022394:40762-40781 | Msa1399730:CDS | 40.0% | |
| CTACTTGGATTCATCCATTG+GGG | - | tig0022394:40779-40798 | None:intergenic | 40.0% | |
| GCTACTTGGATTCATCCATT+GGG | - | tig0022394:40780-40799 | None:intergenic | 40.0% | |
| AATATCCGATGTCTCTCAGA+AGG | + | tig0022394:40984-41003 | Msa1399730:three_prime_UTR | 40.0% | |
| ! | CATAACCTTCTGAGAGACAT+CGG | - | tig0022394:40992-41011 | None:intergenic | 40.0% |
| GATGTCTCTCAGAAGGTTAT+GGG | + | tig0022394:40991-41010 | Msa1399730:three_prime_UTR | 40.0% | |
| TTAACTGGTATAACTCCGGA+TGG | - | tig0022394:41050-41069 | None:intergenic | 40.0% | |
| ! | GCGAAGGTATGTGAAAGTGA+GGG | - | tig0022394:34555-34574 | None:intergenic | 45.0% |
| ! | AGCGAAGGTATGTGAAAGTG+AGG | - | tig0022394:34556-34575 | None:intergenic | 45.0% |
| CGATGGAAGATGAACTCATC+TGG | - | tig0022394:34729-34748 | None:intergenic | 45.0% | |
| ! | TTTTACCAGCACGAAACTCC+AGG | - | tig0022394:34994-35013 | None:intergenic | 45.0% |
| !!! | CCGCTGGTTTTTAGTTGAAG+TGG | + | tig0022394:35198-35217 | Msa1399730:intron | 45.0% |
| !!! | GTTGTTTTTGTCTCAGGGTG+AGG | + | tig0022394:35220-35239 | Msa1399730:intron | 45.0% |
| ! | TTTTTGTCTCAGGGTGAGGA+GGG | + | tig0022394:35224-35243 | Msa1399730:intron | 45.0% |
| !! | TCGTATTTGGTGTGTTCCCA+TGG | + | tig0022394:35765-35784 | Msa1399730:intron | 45.0% |
| CGGTCAAATAGTTGGAGGTA+GGG | - | tig0022394:36089-36108 | None:intergenic | 45.0% | |
| TCGGTCAAATAGTTGGAGGT+AGG | - | tig0022394:36090-36109 | None:intergenic | 45.0% | |
| TGGATCGGTCAAATAGTTGG+AGG | - | tig0022394:36094-36113 | None:intergenic | 45.0% | |
| TGAGCAGATGGAGGAAATGT+TGG | - | tig0022394:36114-36133 | None:intergenic | 45.0% | |
| TAGTAGAGTTGAGCAGATGG+AGG | - | tig0022394:36123-36142 | None:intergenic | 45.0% | |
| CCATAGTAGAGTTGAGCAGA+TGG | - | tig0022394:36126-36145 | None:intergenic | 45.0% | |
| CCATCTGCTCAACTCTACTA+TGG | + | tig0022394:36123-36142 | Msa1399730:intron | 45.0% | |
| GGTACTCGTCTTAGGTGATT+CGG | - | tig0022394:36178-36197 | None:intergenic | 45.0% | |
| CAGGACCTATGGAAACTGTT+GGG | + | tig0022394:36606-36625 | Msa1399730:intron | 45.0% | |
| AGGACCTATGGAAACTGTTG+GGG | + | tig0022394:36607-36626 | Msa1399730:intron | 45.0% | |
| ACCATGGAATTTAAGCTGGG+TGG | + | tig0022394:36944-36963 | Msa1399730:intron | 45.0% | |
| ACCACCCAGCTTAAATTCCA+TGG | - | tig0022394:36948-36967 | None:intergenic | 45.0% | |
| GTTGTACGAGACAGTGTTCT+AGG | + | tig0022394:37051-37070 | Msa1399730:intron | 45.0% | |
| GACAACATTGGAGAGAGTTG+GGG | + | tig0022394:37169-37188 | Msa1399730:intron | 45.0% | |
| TTGTGGAAACTAGGCTTAGG+TGG | + | tig0022394:37213-37232 | Msa1399730:intron | 45.0% | |
| GAAACTAGGCTTAGGTGGTT+TGG | + | tig0022394:37218-37237 | Msa1399730:intron | 45.0% | |
| ! | AAGCCTTGTCCTACTAAGTG+GGG | - | tig0022394:37345-37364 | None:intergenic | 45.0% |
| ! | CAAGCCTTGTCCTACTAAGT+GGG | - | tig0022394:37346-37365 | None:intergenic | 45.0% |
| AATAGAGGTCAGGAAAGAGC+AGG | - | tig0022394:37396-37415 | None:intergenic | 45.0% | |
| TTCTTGACCTAAGCCAACAC+AGG | + | tig0022394:37507-37526 | Msa1399730:intron | 45.0% | |
| !! | ATCTGATCCTGTGTTGGCTT+AGG | - | tig0022394:37517-37536 | None:intergenic | 45.0% |
| !!! | GAACGAGGCTATTTTTGAGC+AGG | + | tig0022394:37546-37565 | Msa1399730:intron | 45.0% |
| TTCTTCTTCTGGATGCAGGT+TGG | + | tig0022394:37709-37728 | Msa1399730:intron | 45.0% | |
| AAACAGACTCACGCATCTGT+AGG | - | tig0022394:38131-38150 | None:intergenic | 45.0% | |
| TATCCGGTGCAAGTACATAC+CGG | - | tig0022394:38361-38380 | None:intergenic | 45.0% | |
| ! | AACCATACAGGGTGCTTATC+CGG | - | tig0022394:38377-38396 | None:intergenic | 45.0% |
| ATGGGGCCACCATAATCAAA+TGG | - | tig0022394:38736-38755 | None:intergenic | 45.0% | |
| TTCTCACTAACAGAGCTCCT+TGG | + | tig0022394:39065-39084 | Msa1399730:intron | 45.0% | |
| CATCAGGTTCTTCTTCACCA+AGG | - | tig0022394:39085-39104 | None:intergenic | 45.0% | |
| CTTCAGAAACTTCAAGCGGA+AGG | - | tig0022394:39112-39131 | None:intergenic | 45.0% | |
| GTTGGAAAGAGCTGCAAACT+TGG | + | tig0022394:39323-39342 | Msa1399730:intron | 45.0% | |
| AACTTGGTTGTCCCGAACTT+TGG | + | tig0022394:39339-39358 | Msa1399730:CDS | 45.0% | |
| TTGCATCCACACCAAAGTTC+GGG | - | tig0022394:39353-39372 | None:intergenic | 45.0% | |
| GTTGCATCCACACCAAAGTT+CGG | - | tig0022394:39354-39373 | None:intergenic | 45.0% | |
| AGCATTCTTGATCCTGACGA+AGG | + | tig0022394:39539-39558 | Msa1399730:CDS | 45.0% | |
| TCCTGACGAAGGTAATCACT+TGG | + | tig0022394:39550-39569 | Msa1399730:intron | 45.0% | |
| CATACTAATGCCCCTCATCA+TGG | - | tig0022394:39741-39760 | None:intergenic | 45.0% | |
| ! | GAATCTACTTGCTGACGGAA+AGG | - | tig0022394:40075-40094 | None:intergenic | 45.0% |
| GGAGAAGTAACAACTACAGC+TGG | - | tig0022394:40321-40340 | None:intergenic | 45.0% | |
| GTCCCTACAACACACTAGAT+TGG | - | tig0022394:40342-40361 | None:intergenic | 45.0% | |
| AGCCTCTACCGTATACCAAA+TGG | - | tig0022394:40398-40417 | None:intergenic | 45.0% | |
| ACTGTGAACTTGTCTGCCAA+GGG | - | tig0022394:40667-40686 | None:intergenic | 45.0% | |
| AACTGTGAACTTGTCTGCCA+AGG | - | tig0022394:40668-40687 | None:intergenic | 45.0% | |
| TCTCCAAGTCTGAGGAATCT+AGG | + | tig0022394:40719-40738 | Msa1399730:CDS | 45.0% | |
| TTGCCTAGATTCCTCAGACT+TGG | - | tig0022394:40725-40744 | None:intergenic | 45.0% | |
| GGAATCTAGGCAAGATGATC+AGG | + | tig0022394:40732-40751 | Msa1399730:CDS | 45.0% | |
| GGCTACTTGGATTCATCCAT+TGG | - | tig0022394:40781-40800 | None:intergenic | 45.0% | |
| ATGGATGAATCCAAGTAGCC+TGG | + | tig0022394:40781-40800 | Msa1399730:exon | 45.0% | |
| AAAGATGAAAGTAGCCTGCC+AGG | - | tig0022394:40802-40821 | None:intergenic | 45.0% | |
| CGATGTCTCTCAGAAGGTTA+TGG | + | tig0022394:40990-41009 | Msa1399730:three_prime_UTR | 45.0% | |
| ! | CTATATGTCGAGTTGCCATC+CGG | + | tig0022394:41032-41051 | Msa1399730:three_prime_UTR | 45.0% |
| !! | GATTGCAGGAAAAGCGTCGA+TGG | - | tig0022394:34746-34765 | None:intergenic | 50.0% |
| TAAGCCAGGAAGATCTGGGA+TGG | + | tig0022394:34899-34918 | Msa1399730:intron | 50.0% | |
| ACTTCCATCCCAGATCTTCC+TGG | - | tig0022394:34906-34925 | None:intergenic | 50.0% | |
| CTGTTGACAGGAAACTCTCC+TGG | + | tig0022394:34973-34992 | Msa1399730:intron | 50.0% | |
| GTAGTTCCTGATGCACGCAA+AGG | + | tig0022394:35034-35053 | Msa1399730:CDS | 50.0% | |
| AAGGACTCGTTCGCATTGCT+AGG | + | tig0022394:35053-35072 | Msa1399730:CDS | 50.0% | |
| AGGACTCGTTCGCATTGCTA+GGG | + | tig0022394:35054-35073 | Msa1399730:CDS | 50.0% | |
| CTAAAAACCAGCGGCAGTCA+TGG | - | tig0022394:35192-35211 | None:intergenic | 50.0% | |
| ! | GTTTTTGTCTCAGGGTGAGG+AGG | + | tig0022394:35223-35242 | Msa1399730:intron | 50.0% |
| !! | TGGAGGAGTGTTGTTGCAAG+GGG | - | tig0022394:36503-36522 | None:intergenic | 50.0% |
| !! | GTGGAGGAGTGTTGTTGCAA+GGG | - | tig0022394:36504-36523 | None:intergenic | 50.0% |
| !! | AGTGGAGGAGTGTTGTTGCA+AGG | - | tig0022394:36505-36524 | None:intergenic | 50.0% |
| GCAGGACCTATGGAAACTGT+TGG | + | tig0022394:36605-36624 | Msa1399730:intron | 50.0% | |
| CCTTCCCCAACAGTTTCCAT+AGG | - | tig0022394:36614-36633 | None:intergenic | 50.0% | |
| CCTATGGAAACTGTTGGGGA+AGG | + | tig0022394:36611-36630 | Msa1399730:intron | 50.0% | |
| TGTAGCCAACCCCACTTAGT+AGG | + | tig0022394:37333-37352 | Msa1399730:intron | 50.0% | |
| CTTGTCCTACTAAGTGGGGT+TGG | - | tig0022394:37341-37360 | None:intergenic | 50.0% | |
| CAACCCCACTTAGTAGGACA+AGG | + | tig0022394:37339-37358 | Msa1399730:intron | 50.0% | |
| ! | CCAAGCCTTGTCCTACTAAG+TGG | - | tig0022394:37347-37366 | None:intergenic | 50.0% |
| CCACTTAGTAGGACAAGGCT+TGG | + | tig0022394:37344-37363 | Msa1399730:intron | 50.0% | |
| ! | GTAGGACAAGGCTTGGTTGT+TGG | + | tig0022394:37351-37370 | Msa1399730:intron | 50.0% |
| ! | ACGTGTAAGCCTTATGCCAG+TGG | + | tig0022394:37942-37961 | Msa1399730:intron | 50.0% |
| AGAATTGCAGGATCGTCCAC+TGG | - | tig0022394:37961-37980 | None:intergenic | 50.0% | |
| !! | AGTACATACCGGCTCTACGT+GGG | - | tig0022394:38350-38369 | None:intergenic | 50.0% |
| !! | AAGTACATACCGGCTCTACG+TGG | - | tig0022394:38351-38370 | None:intergenic | 50.0% |
| TCAAGCGGAAGGGATACATC+AGG | - | tig0022394:39101-39120 | None:intergenic | 50.0% | |
| GCCAAGTGATTACCTTCGTC+AGG | - | tig0022394:39554-39573 | None:intergenic | 50.0% | |
| ! | CTACTTGCTGACGGAAAGGT+GGG | - | tig0022394:40071-40090 | None:intergenic | 50.0% |
| ! | TCTACTTGCTGACGGAAAGG+TGG | - | tig0022394:40072-40091 | None:intergenic | 50.0% |
| TGTAGGTTTCAGGCGTGTGT+AGG | + | tig0022394:40513-40532 | Msa1399730:intron | 50.0% | |
| CTGTGAACTTGTCTGCCAAG+GGG | - | tig0022394:40666-40685 | None:intergenic | 50.0% | |
| !! | GTCTTTTCTGGAGGCTCTTG+AGG | + | tig0022394:40690-40709 | Msa1399730:CDS | 50.0% |
| GGATTCTGTCTCCAAGTCTG+AGG | + | tig0022394:40711-40730 | Msa1399730:CDS | 50.0% | |
| ATGAATCCAAGTAGCCTGGC+AGG | + | tig0022394:40785-40804 | Msa1399730:exon | 50.0% | |
| GAATAAGACAGGGGTCGGAG+CGG | + | tig0022394:34497-34516 | Msa1399730:five_prime_UTR | 55.0% | |
| AACGAAGCGAAGCGAAGCGA+AGG | - | tig0022394:34571-34590 | None:intergenic | 55.0% | |
| ! | CGACGCTTTTCCTGCAATCC+AGG | + | tig0022394:34747-34766 | Msa1399730:CDS | 55.0% |
| ACTCTCCTGGAGTTTCGTGC+TGG | + | tig0022394:34986-35005 | Msa1399730:CDS | 55.0% | |
| ACGAGTCCTTTGCGTGCATC+AGG | - | tig0022394:35043-35062 | None:intergenic | 55.0% | |
| AACTCAACCATGACTGCCGC+TGG | + | tig0022394:35182-35201 | Msa1399730:intron | 55.0% | |
| !! | GGAGGAGTGTTGTTGCAAGG+GGG | - | tig0022394:36502-36521 | None:intergenic | 55.0% |
| CAGGATCGTCCACTGGCATA+AGG | - | tig0022394:37954-37973 | None:intergenic | 55.0% | |
| ATTGGGTACCCACGTAGAGC+CGG | + | tig0022394:38339-38358 | Msa1399730:intron | 55.0% | |
| GAGCCGGTATGTACTTGCAC+CGG | + | tig0022394:38355-38374 | Msa1399730:intron | 55.0% | |
| CACCGGATAAGCACCCTGTA+TGG | + | tig0022394:38372-38391 | Msa1399730:intron | 55.0% | |
| GGTTGTCCCGAACTTTGGTG+TGG | + | tig0022394:39344-39363 | Msa1399730:CDS | 55.0% | |
| AGCAACATTGGACCTGCTGC+AGG | + | tig0022394:39429-39448 | Msa1399730:CDS | 55.0% | |
| GAAGCTAGACGCTGCTCCAA+TGG | - | tig0022394:39918-39937 | None:intergenic | 55.0% | |
| TCGCTGCAGGTACTTCGAAC+AGG | + | tig0022394:40179-40198 | Msa1399730:intron | 55.0% | |
| AAGTAGCCTGCCAGGCTACT+TGG | - | tig0022394:40794-40813 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022394 | gene | 34481 | 41151 | 34481 | ID=Msa1399730;Name=Msa1399730 |
| tig0022394 | mRNA | 34481 | 41151 | 34481 | ID=Msa1399730-mRNA-1;Parent=Msa1399730;Name=Msa1399730-mRNA-1;_AED=0.15;_eAED=0.15;_QI=140|0.83|0.92|1|0.91|0.84|13|353|297 |
| tig0022394 | exon | 34481 | 34606 | 34481 | ID=Msa1399730-mRNA-1:exon:17343;Parent=Msa1399730-mRNA-1 |
| tig0022394 | exon | 34716 | 34768 | 34716 | ID=Msa1399730-mRNA-1:exon:17344;Parent=Msa1399730-mRNA-1 |
| tig0022394 | exon | 34983 | 35075 | 34983 | ID=Msa1399730-mRNA-1:exon:17345;Parent=Msa1399730-mRNA-1 |
| tig0022394 | exon | 35236 | 35295 | 35236 | ID=Msa1399730-mRNA-1:exon:17346;Parent=Msa1399730-mRNA-1 |
| tig0022394 | exon | 37652 | 37726 | 37652 | ID=Msa1399730-mRNA-1:exon:17347;Parent=Msa1399730-mRNA-1 |
| tig0022394 | exon | 37828 | 37894 | 37828 | ID=Msa1399730-mRNA-1:exon:17348;Parent=Msa1399730-mRNA-1 |
| tig0022394 | exon | 39078 | 39159 | 39078 | ID=Msa1399730-mRNA-1:exon:17349;Parent=Msa1399730-mRNA-1 |
| tig0022394 | exon | 39332 | 39450 | 39332 | ID=Msa1399730-mRNA-1:exon:17350;Parent=Msa1399730-mRNA-1 |
| tig0022394 | exon | 39537 | 39560 | 39537 | ID=Msa1399730-mRNA-1:exon:17351;Parent=Msa1399730-mRNA-1 |
| tig0022394 | exon | 39856 | 39950 | 39856 | ID=Msa1399730-mRNA-1:exon:17352;Parent=Msa1399730-mRNA-1 |
| tig0022394 | exon | 40027 | 40086 | 40027 | ID=Msa1399730-mRNA-1:exon:17353;Parent=Msa1399730-mRNA-1 |
| tig0022394 | exon | 40188 | 40242 | 40188 | ID=Msa1399730-mRNA-1:exon:17354;Parent=Msa1399730-mRNA-1 |
| tig0022394 | exon | 40674 | 41151 | 40674 | ID=Msa1399730-mRNA-1:exon:17355;Parent=Msa1399730-mRNA-1 |
| tig0022394 | five_prime_UTR | 34481 | 34606 | 34481 | ID=Msa1399730-mRNA-1:five_prime_utr;Parent=Msa1399730-mRNA-1 |
| tig0022394 | five_prime_UTR | 34716 | 34729 | 34716 | ID=Msa1399730-mRNA-1:five_prime_utr;Parent=Msa1399730-mRNA-1 |
| tig0022394 | CDS | 34730 | 34768 | 34730 | ID=Msa1399730-mRNA-1:cds;Parent=Msa1399730-mRNA-1 |
| tig0022394 | CDS | 34983 | 35075 | 34983 | ID=Msa1399730-mRNA-1:cds;Parent=Msa1399730-mRNA-1 |
| tig0022394 | CDS | 35236 | 35295 | 35236 | ID=Msa1399730-mRNA-1:cds;Parent=Msa1399730-mRNA-1 |
| tig0022394 | CDS | 37652 | 37726 | 37652 | ID=Msa1399730-mRNA-1:cds;Parent=Msa1399730-mRNA-1 |
| tig0022394 | CDS | 37828 | 37894 | 37828 | ID=Msa1399730-mRNA-1:cds;Parent=Msa1399730-mRNA-1 |
| tig0022394 | CDS | 39078 | 39159 | 39078 | ID=Msa1399730-mRNA-1:cds;Parent=Msa1399730-mRNA-1 |
| tig0022394 | CDS | 39332 | 39450 | 39332 | ID=Msa1399730-mRNA-1:cds;Parent=Msa1399730-mRNA-1 |
| tig0022394 | CDS | 39537 | 39560 | 39537 | ID=Msa1399730-mRNA-1:cds;Parent=Msa1399730-mRNA-1 |
| tig0022394 | CDS | 39856 | 39950 | 39856 | ID=Msa1399730-mRNA-1:cds;Parent=Msa1399730-mRNA-1 |
| tig0022394 | CDS | 40027 | 40086 | 40027 | ID=Msa1399730-mRNA-1:cds;Parent=Msa1399730-mRNA-1 |
| tig0022394 | CDS | 40188 | 40242 | 40188 | ID=Msa1399730-mRNA-1:cds;Parent=Msa1399730-mRNA-1 |
| tig0022394 | CDS | 40674 | 40798 | 40674 | ID=Msa1399730-mRNA-1:cds;Parent=Msa1399730-mRNA-1 |
| tig0022394 | three_prime_UTR | 40799 | 41151 | 40799 | ID=Msa1399730-mRNA-1:three_prime_utr;Parent=Msa1399730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
