Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573220 | KEH21308.1 | 98.722 | 313 | 1 | 1 | 1 | 313 | 1 | 310 | 0.0 | 613 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573220 | sp|O48726|RPN13_ARATH | 65.506 | 316 | 85 | 5 | 4 | 312 | 2 | 300 | 1.74e-136 | 391 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573220 | A0A072TWQ5 | 98.722 | 313 | 1 | 1 | 1 | 313 | 1 | 310 | 0.0 | 613 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0064380 | Msa0573220 | 0.804867 | 1.757489e-49 | -8.615850e-47 |
| Msa0191050 | Msa0573220 | 0.800036 | 1.739886e-48 | -8.615850e-47 |
| Msa0573220 | Msa1304820 | 0.804141 | 2.491294e-49 | -8.615850e-47 |
| Msa0573220 | Msa1361100 | 0.801078 | 1.066778e-48 | -8.615850e-47 |
| Msa0573220 | Msa1399730 | 0.850385 | 1.756847e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573220 | MtrunA17_Chr8g0388971 | 96.865 | 319 | 1 | 2 | 1 | 313 | 1 | 316 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573220 | AT2G26590.2 | 65.506 | 316 | 85 | 5 | 4 | 312 | 2 | 300 | 1.77e-137 | 391 |
| Msa0573220 | AT2G26590.3 | 65.506 | 316 | 85 | 5 | 4 | 312 | 2 | 300 | 1.77e-137 | 391 |
| Msa0573220 | AT2G26590.1 | 65.506 | 316 | 85 | 5 | 4 | 312 | 2 | 300 | 1.77e-137 | 391 |
| Msa0573220 | AT2G26590.4 | 63.924 | 316 | 86 | 6 | 4 | 312 | 2 | 296 | 3.97e-131 | 375 |
Find 96 sgRNAs with CRISPR-Local
Find 435 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATATTTCTGCTTGAAAA+AGG | 0.222480 | 4_1:-76308344 | Msa0573220:three_prime_UTR |
| AAATGTCACTAGAGGGAAAA+AGG | 0.228102 | 4_1:-76314224 | Msa0573220:CDS |
| ATCTTCTGGTCCAGTTAAAT+TGG | 0.244685 | 4_1:-76309817 | Msa0573220:CDS |
| TAACATTACCTCTGGTAAAT+AGG | 0.276133 | 4_1:+76309266 | None:intergenic |
| GATCAATATAATTCTTTAAC+TGG | 0.282739 | 4_1:+76308142 | None:intergenic |
| CAGATAGATTTGTCCCAGTT+TGG | 0.317934 | 4_1:-76309001 | Msa0573220:CDS |
| ATGACAGAAAGTTCTTCTTC+TGG | 0.336325 | 4_1:-76311511 | Msa0573220:CDS |
| CGATGTCTCTCAGAAGGTTA+TGG | 0.343372 | 4_1:-76308214 | Msa0573220:three_prime_UTR |
| TACTTGGATCAATTCCAAAC+TGG | 0.345350 | 4_1:+76308987 | None:intergenic |
| TGGAGATCTGCCAATTTAAC+TGG | 0.349597 | 4_1:+76309807 | None:intergenic |
| ACTAGCGATGTAACATCTTC+TGG | 0.352930 | 4_1:-76309831 | Msa0573220:CDS |
| GAGATTATTACCTGGATTGC+AGG | 0.356564 | 4_1:+76314491 | None:intergenic |
| GGCTACTTGGATTCATCCAT+TGG | 0.381548 | 4_1:+76308426 | None:intergenic |
| TGATCTGATATTGCCATTGA+TGG | 0.395309 | 4_1:-76309319 | Msa0573220:CDS |
| ACTAGAAACTTACATTTACT+TGG | 0.408411 | 4_1:+76308971 | None:intergenic |
| GATTAGGTTAATCAAACATC+TGG | 0.417400 | 4_1:-76311563 | Msa0573220:intron |
| GATTACCTCAACAGACCATT+AGG | 0.418595 | 4_1:-76311336 | Msa0573220:intron |
| ACGAGTCCTTTGCGTGCATC+AGG | 0.422741 | 4_1:+76314195 | None:intergenic |
| GGAATCTAGGCAAGATGATC+AGG | 0.427826 | 4_1:-76308472 | Msa0573220:CDS |
| TCTCCAAGTCTGAGGAATCT+AGG | 0.438245 | 4_1:-76308485 | Msa0573220:CDS |
| AAGTAGCCTGCCAGGCTACT+TGG | 0.438982 | 4_1:+76308413 | None:intergenic |
| GTTGCATCCACACCAAAGTT+CGG | 0.439990 | 4_1:+76309852 | None:intergenic |
| CAATGTTGCTCAATATTCTC+TGG | 0.443937 | 4_1:+76309787 | None:intergenic |
| AATAAGAATAAGAATAAGAC+AGG | 0.445212 | 4_1:-76314768 | Msa0573220:five_prime_UTR |
| GATGTCTCTCAGAAGGTTAT+GGG | 0.446787 | 4_1:-76308213 | Msa0573220:three_prime_UTR |
| CGATGGAAGATGAACTCATC+TGG | 0.449705 | 4_1:+76314522 | None:intergenic |
| TTGCATCCACACCAAAGTTC+GGG | 0.455855 | 4_1:+76309853 | None:intergenic |
| TCGCTGCAGGTACTTCGAAC+AGG | 0.457627 | 4_1:-76309025 | Msa0573220:intron |
| GCTACTTGGATTCATCCATT+GGG | 0.458064 | 4_1:+76308427 | None:intergenic |
| AAAGTTCTTCTTCTGGATGC+AGG | 0.461672 | 4_1:-76311504 | Msa0573220:intron |
| TTCTATAGATACAAGAAACT+TGG | 0.464123 | 4_1:-76308381 | Msa0573220:three_prime_UTR |
| GCCAAGTGATTACCTTCGTC+AGG | 0.468536 | 4_1:+76309652 | None:intergenic |
| ATCAATGGCAATATCAGATC+AGG | 0.469632 | 4_1:+76309321 | None:intergenic |
| AAGGACTCGTTCGCATTGCT+AGG | 0.470556 | 4_1:-76314182 | Msa0573220:CDS |
| TTAATAAAATTCAAATCTAT+CGG | 0.473747 | 4_1:-76308261 | Msa0573220:three_prime_UTR |
| TACTCAACTCAATTCGATGA+TGG | 0.475185 | 4_1:+76314657 | None:intergenic |
| CTGTTGACAGGAAACTCTCC+TGG | 0.487004 | 4_1:-76314262 | Msa0573220:intron |
| TTGGTCTCCAGAAGATATAT+TGG | 0.495383 | 4_1:-76309172 | Msa0573220:CDS |
| AACAACTCCAATATATCTTC+TGG | 0.501293 | 4_1:+76309165 | None:intergenic |
| AATGGTAACGTCTCCATCAA+TGG | 0.501612 | 4_1:+76309306 | None:intergenic |
| ATTCTATGATGTAGGGTACT+TGG | 0.504079 | 4_1:-76309191 | Msa0573220:intron |
| TTGCCTAGATTCCTCAGACT+TGG | 0.504515 | 4_1:+76308482 | None:intergenic |
| GCTTGAAGTTTCTGAAGATA+CGG | 0.509208 | 4_1:-76310088 | Msa0573220:CDS |
| GTTGGAAAGAGCTGCAAACT+TGG | 0.509813 | 4_1:-76309880 | Msa0573220:intron |
| AACTTGGTTGTCCCGAACTT+TGG | 0.511711 | 4_1:-76309864 | Msa0573220:CDS |
| TTCTCACTAACAGAGCTCCT+TGG | 0.514456 | 4_1:-76310138 | Msa0573220:intron |
| CAGAGAATATTGAGCAACAT+TGG | 0.515670 | 4_1:-76309786 | Msa0573220:CDS |
| AAAGATGAAAGTAGCCTGCC+AGG | 0.515923 | 4_1:+76308405 | None:intergenic |
| CTATATGTCGAGTTGCCATC+CGG | 0.515997 | 4_1:-76308172 | Msa0573220:three_prime_UTR |
| AGCAACATTGGACCTGCTGC+AGG | 0.516938 | 4_1:-76309774 | Msa0573220:intron |
| AATATTATCTGATCCTGTGT+TGG | 0.517875 | 4_1:+76311689 | None:intergenic |
| TTCTTTAACTGGTATAACTC+CGG | 0.522752 | 4_1:+76308153 | None:intergenic |
| ATTGATGGAGACGTTACCAT+TGG | 0.528804 | 4_1:-76309304 | Msa0573220:CDS |
| ATGAATCCAAGTAGCCTGGC+AGG | 0.537000 | 4_1:-76308419 | Msa0573220:exon |
| ACTTGGATCAATTCCAAACT+GGG | 0.539991 | 4_1:+76308988 | None:intergenic |
| AATAAGAATAAGACAGGGGT+CGG | 0.545213 | 4_1:-76314762 | Msa0573220:five_prime_UTR |
| GAAGCTAGACGCTGCTCCAA+TGG | 0.546492 | 4_1:+76309288 | None:intergenic |
| ATGGATGAATCCAAGTAGCC+TGG | 0.548773 | 4_1:-76308423 | Msa0573220:exon |
| ATCTCAATCTTGTACCCCAA+TGG | 0.549644 | 4_1:-76308442 | Msa0573220:CDS |
| GGTTAATCAAACATCTGGAA+GGG | 0.549885 | 4_1:-76311558 | Msa0573220:CDS |
| TTCAGAAACTTCAAGCGGAA+GGG | 0.552715 | 4_1:+76310095 | None:intergenic |
| TCTACTTGCTGACGGAAAGG+TGG | 0.554317 | 4_1:+76309135 | None:intergenic |
| GATTGCAGGAAAAGCGTCGA+TGG | 0.560072 | 4_1:+76314505 | None:intergenic |
| AATCTGAGTGAATAAACAAA+CGG | 0.561314 | 4_1:-76314727 | Msa0573220:five_prime_UTR |
| TGTAACTTATTACCTGCAGC+AGG | 0.562977 | 4_1:+76309762 | None:intergenic |
| CTACTTGCTGACGGAAAGGT+GGG | 0.563809 | 4_1:+76309136 | None:intergenic |
| GAATCTACTTGCTGACGGAA+AGG | 0.566905 | 4_1:+76309132 | None:intergenic |
| CTTCAGAAACTTCAAGCGGA+AGG | 0.572912 | 4_1:+76310094 | None:intergenic |
| TCAAGCGGAAGGGATACATC+AGG | 0.576564 | 4_1:+76310105 | None:intergenic |
| ACTCTCCTGGAGTTTCGTGC+TGG | 0.579564 | 4_1:-76314249 | Msa0573220:CDS |
| TAAAAGAATCTACTTGCTGA+CGG | 0.580735 | 4_1:+76309127 | None:intergenic |
| AGGTTAATCAAACATCTGGA+AGG | 0.590396 | 4_1:-76311559 | Msa0573220:CDS |
| TGCTGGTAAAATGTCACTAG+AGG | 0.593216 | 4_1:-76314232 | Msa0573220:CDS |
| AATATCCGATGTCTCTCAGA+AGG | 0.593544 | 4_1:-76308220 | Msa0573220:three_prime_UTR |
| ATTTAATTAGGCTTTGAACT+CGG | 0.598507 | 4_1:-76309357 | Msa0573220:intron |
| TTAACTGGTATAACTCCGGA+TGG | 0.600382 | 4_1:+76308157 | None:intergenic |
| AGGACTCGTTCGCATTGCTA+GGG | 0.600668 | 4_1:-76314181 | Msa0573220:intron |
| CATAACCTTCTGAGAGACAT+CGG | 0.608094 | 4_1:+76308215 | None:intergenic |
| GCTATGTGAAAGTGAAAGTG+AGG | 0.623492 | 4_1:+76314701 | None:intergenic |
| GCTGGTAAAATGTCACTAGA+GGG | 0.629870 | 4_1:-76314231 | Msa0573220:CDS |
| GTAGTTCCTGATGCACGCAA+AGG | 0.629923 | 4_1:-76314201 | Msa0573220:CDS |
| GGTTGTCCCGAACTTTGGTG+TGG | 0.640547 | 4_1:-76309859 | Msa0573220:CDS |
| TTGAAGATGACATCTCATCC+AGG | 0.641031 | 4_1:-76310065 | Msa0573220:intron |
| TCTAGCTTCCTATTTACCAG+AGG | 0.641283 | 4_1:-76309274 | Msa0573220:intron |
| GGATTCTGTCTCCAAGTCTG+AGG | 0.641302 | 4_1:-76308493 | Msa0573220:CDS |
| CTACTTGGATTCATCCATTG+GGG | 0.648704 | 4_1:+76308428 | None:intergenic |
| ACTTACCTAATGGTCTGTTG+AGG | 0.651428 | 4_1:+76311331 | None:intergenic |
| TTCTTGACCTAAGCCAACAC+AGG | 0.652016 | 4_1:-76311702 | Msa0573220:intron |
| AGCATTCTTGATCCTGACGA+AGG | 0.660593 | 4_1:-76309664 | Msa0573220:intron |
| GAATAAGACAGGGGTCGGAG+CGG | 0.668790 | 4_1:-76314757 | Msa0573220:five_prime_UTR |
| CTATGTGAAAGTGAAAGTGA+GGG | 0.683131 | 4_1:+76314702 | None:intergenic |
| CATCAGGTTCTTCTTCACCA+AGG | 0.686746 | 4_1:+76310121 | None:intergenic |
| GTATCTTCAGAAACTTCAAG+CGG | 0.690380 | 4_1:+76310090 | None:intergenic |
| TCAGATAATATTTCCGAACG+AGG | 0.696593 | 4_1:-76311678 | Msa0573220:CDS |
| ATAAGAATAAGAATAAGACA+GGG | 0.701067 | 4_1:-76314767 | Msa0573220:five_prime_UTR |
| TAAGAATAAGAATAAGACAG+GGG | 0.712361 | 4_1:-76314766 | Msa0573220:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTAGTAACAAAATAA+AGG | + | chr4_1:76308278-76308297 | None:intergenic | 10.0% |
| !! | TTGTGAAAAAAAATAAAAAT+TGG | + | chr4_1:76309558-76309577 | None:intergenic | 10.0% |
| !! | TATTAGTAAATGAAATTTAT+AGG | - | chr4_1:76309937-76309956 | Msa0573220:intron | 10.0% |
| !! | ATTAGTAAATGAAATTTATA+GGG | - | chr4_1:76309938-76309957 | Msa0573220:intron | 10.0% |
| !!! | TTGCTAATATTTTTTATAAA+AGG | + | chr4_1:76313437-76313456 | None:intergenic | 10.0% |
| !! | TTATAAAAAATATTAGCAAA+AGG | - | chr4_1:76313438-76313457 | Msa0573220:intron | 10.0% |
| !! | TAAAAATAAACAAAAAATGA+AGG | - | chr4_1:76314203-76314222 | Msa0573220:CDS | 10.0% |
| !!! | TATTTAATTAAGATTTTTCA+AGG | - | chr4_1:76314546-76314565 | Msa0573220:intron | 10.0% |
| !! | TTAATAAAATTCAAATCTAT+CGG | - | chr4_1:76314587-76314606 | Msa0573220:intron | 10.0% |
| !! | AACAGCAATTATAAATATTT+GGG | + | chr4_1:76308920-76308939 | None:intergenic | 15.0% |
| !!! | ATTTTGCACAAAAAATTAAT+CGG | + | chr4_1:76309061-76309080 | None:intergenic | 15.0% |
| !!! | TGAACAATTTTGTTATTTAT+CGG | - | chr4_1:76309305-76309324 | Msa0573220:CDS | 15.0% |
| !! | TTATAACTAGTAAAAACAAA+AGG | - | chr4_1:76309418-76309437 | Msa0573220:intron | 15.0% |
| !! | TATAACTAGTAAAAACAAAA+GGG | - | chr4_1:76309419-76309438 | Msa0573220:intron | 15.0% |
| !! | AAAAAAAAAACTTAAACTTC+AGG | + | chr4_1:76309459-76309478 | None:intergenic | 15.0% |
| !!! | TTTTATTTTTTTTCACAAAG+TGG | - | chr4_1:76309560-76309579 | Msa0573220:intron | 15.0% |
| !!! | TTTATTTTTTTTCACAAAGT+GGG | - | chr4_1:76309561-76309580 | Msa0573220:intron | 15.0% |
| !! | TTAGTAAATGAAATTTATAG+GGG | - | chr4_1:76309939-76309958 | Msa0573220:intron | 15.0% |
| !! | TATTTACAAGATTATAAATG+AGG | - | chr4_1:76311715-76311734 | Msa0573220:intron | 15.0% |
| !!! | TTGTACATAATTTATTTTCA+TGG | - | chr4_1:76312249-76312268 | Msa0573220:intron | 15.0% |
| !! | TGAAATGTAAAAAAGAAAAA+GGG | + | chr4_1:76313770-76313789 | None:intergenic | 15.0% |
| !! | ATGAAATGTAAAAAAGAAAA+AGG | + | chr4_1:76313771-76313790 | None:intergenic | 15.0% |
| !! | ATTTCATTTCAAAAGATATT+CGG | - | chr4_1:76313784-76313803 | Msa0573220:intron | 15.0% |
| !! | ATCAAAATCAATAACAATTA+AGG | + | chr4_1:76313925-76313944 | None:intergenic | 15.0% |
| !! | AATAAGAATAAGAATAAGAC+AGG | - | chr4_1:76308080-76308099 | Msa0573220:three_prime_UTR | 20.0% |
| !! | ATAAGAATAAGAATAAGACA+GGG | - | chr4_1:76308081-76308100 | Msa0573220:three_prime_UTR | 20.0% |
| !!! | TTTTTTATGCTATGATTGAT+CGG | - | chr4_1:76308553-76308572 | Msa0573220:intron | 20.0% |
| !! | TAAATATTTGGGAAGAAAAA+AGG | + | chr4_1:76308909-76308928 | None:intergenic | 20.0% |
| !! | GAACAGCAATTATAAATATT+TGG | + | chr4_1:76308921-76308940 | None:intergenic | 20.0% |
| !! | AGAATCAAAGAAATATATAC+AGG | - | chr4_1:76309133-76309152 | Msa0573220:intron | 20.0% |
| !! | GAATCAAAGAAATATATACA+GGG | - | chr4_1:76309134-76309153 | Msa0573220:intron | 20.0% |
| !! | ATCTTTATATAGCAGAAAAT+AGG | - | chr4_1:76309172-76309191 | Msa0573220:CDS | 20.0% |
| !! | TCTTTATATAGCAGAAAATA+GGG | - | chr4_1:76309173-76309192 | Msa0573220:CDS | 20.0% |
| !! | ATAGGGAAATAATATTTGAA+TGG | - | chr4_1:76309190-76309209 | Msa0573220:intron | 20.0% |
| !!! | GAACAATTTTGTTATTTATC+GGG | - | chr4_1:76309306-76309325 | Msa0573220:CDS | 20.0% |
| !!! | TTTTACTAGTTATAAACCAA+GGG | + | chr4_1:76309413-76309432 | None:intergenic | 20.0% |
| !!! | TTTTTACTAGTTATAAACCA+AGG | + | chr4_1:76309414-76309433 | None:intergenic | 20.0% |
| !!! | TTATTTTTTTTCACAAAGTG+GGG | - | chr4_1:76309562-76309581 | Msa0573220:intron | 20.0% |
| !!! | CAAAATAGATTTGAGATAAA+TGG | + | chr4_1:76309645-76309664 | None:intergenic | 20.0% |
| !! | CTATGAAAAATAAACACTAA+AGG | + | chr4_1:76309973-76309992 | None:intergenic | 20.0% |
| !! | AGATCTAAAGATTTATAAGT+TGG | - | chr4_1:76310903-76310922 | Msa0573220:intron | 20.0% |
| !!! | TTATAAGTTGGATAGAAATA+TGG | - | chr4_1:76310915-76310934 | Msa0573220:intron | 20.0% |
| !! | CCTAAAAAAAAAAAATGACA+TGG | + | chr4_1:76311891-76311910 | None:intergenic | 20.0% |
| !!! | CCATGTCATTTTTTTTTTTT+AGG | - | chr4_1:76311888-76311907 | Msa0573220:intron | 20.0% |
| !! | TTCGTTAAAAAATGCATATT+AGG | - | chr4_1:76312484-76312503 | Msa0573220:intron | 20.0% |
| !! | ATGAATCAAAACCAAATAAA+AGG | + | chr4_1:76312583-76312602 | None:intergenic | 20.0% |
| !!! | TTTGGATATTCAAATGTTTT+CGG | - | chr4_1:76312813-76312832 | Msa0573220:intron | 20.0% |
| !!! | CTAAAAGTTTGTTTTTTTGT+TGG | - | chr4_1:76312950-76312969 | Msa0573220:intron | 20.0% |
| !! | CATATCATCAAAAAAGTAAT+AGG | + | chr4_1:76313159-76313178 | None:intergenic | 20.0% |
| !!! | AGATTCTTTTACTTATGTAA+AGG | - | chr4_1:76313733-76313752 | Msa0573220:intron | 20.0% |
| !! | AAAATCAATAACAATTAAGG+TGG | + | chr4_1:76313922-76313941 | None:intergenic | 20.0% |
| !! | CTTGAAAAAGGAAAATTTAA+AGG | - | chr4_1:76314516-76314535 | Msa0573220:CDS | 20.0% |
| !! | GATCAATATAATTCTTTAAC+TGG | + | chr4_1:76314709-76314728 | None:intergenic | 20.0% |
| ! | TAAGAATAAGAATAAGACAG+GGG | - | chr4_1:76308082-76308101 | Msa0573220:three_prime_UTR | 25.0% |
| ! | AATCTGAGTGAATAAACAAA+CGG | - | chr4_1:76308121-76308140 | Msa0573220:three_prime_UTR | 25.0% |
| ! | GTAACAAAATAAAGGAGAAA+GGG | + | chr4_1:76308270-76308289 | None:intergenic | 25.0% |
| ! | AGTAACAAAATAAAGGAGAA+AGG | + | chr4_1:76308271-76308290 | None:intergenic | 25.0% |
| ! | AAGATAAAGAGATTATTACC+TGG | + | chr4_1:76308368-76308387 | None:intergenic | 25.0% |
| ! | TTCAACAATGCAAATTCAAA+GGG | + | chr4_1:76308747-76308766 | None:intergenic | 25.0% |
| !! | ATAATTGCTGTTCATTTGAA+TGG | - | chr4_1:76308928-76308947 | Msa0573220:intron | 25.0% |
| ! | TAGAATTTGTATAGAATAGC+TGG | - | chr4_1:76309034-76309053 | Msa0573220:intron | 25.0% |
| ! | GAAATATATACAGGGAAATT+AGG | - | chr4_1:76309142-76309161 | Msa0573220:CDS | 25.0% |
| ! | GGAAATAATATTTGAATGGT+AGG | - | chr4_1:76309194-76309213 | Msa0573220:intron | 25.0% |
| ! | ACTATAAAACTATGAACCAT+GGG | + | chr4_1:76309390-76309409 | None:intergenic | 25.0% |
| ! | TTTCAAAAAAGACAAACTTC+AGG | + | chr4_1:76309493-76309512 | None:intergenic | 25.0% |
| ! | ACCAAAGAAAACTACTATAT+GGG | + | chr4_1:76309675-76309694 | None:intergenic | 25.0% |
| ! | CCACGTTATCTTTATAAATA+AGG | + | chr4_1:76310091-76310110 | None:intergenic | 25.0% |
| !! | CCTTATTTATAAAGATAACG+TGG | - | chr4_1:76310088-76310107 | Msa0573220:CDS | 25.0% |
| ! | TTATCATTGTGACATACTAA+AGG | + | chr4_1:76310163-76310182 | None:intergenic | 25.0% |
| !!! | TACTGAAACAATAGCTTTAT+AGG | + | chr4_1:76310207-76310226 | None:intergenic | 25.0% |
| ! | AGCTTAATAGCTAACAAATA+TGG | - | chr4_1:76310292-76310311 | Msa0573220:intron | 25.0% |
| !!! | CGCTTAATTTATTTTCTTGT+TGG | + | chr4_1:76310726-76310745 | None:intergenic | 25.0% |
| ! | AGGATTATAAATGACAACAT+TGG | - | chr4_1:76310796-76310815 | Msa0573220:intron | 25.0% |
| ! | GGAACAACTAATATTTCAAT+TGG | + | chr4_1:76311106-76311125 | None:intergenic | 25.0% |
| ! | AGCATCAAAATAAATACAGA+AGG | + | chr4_1:76311127-76311146 | None:intergenic | 25.0% |
| ! | TGCTTTACTCTTAATATCTT+GGG | - | chr4_1:76311214-76311233 | Msa0573220:intron | 25.0% |
| !!! | TCTTGGGTATGATTATTTTA+TGG | - | chr4_1:76311230-76311249 | Msa0573220:intron | 25.0% |
| ! | TCATCAAGTCAAAATACTTA+GGG | + | chr4_1:76311400-76311419 | None:intergenic | 25.0% |
| ! | ATCATCAAGTCAAAATACTT+AGG | + | chr4_1:76311401-76311420 | None:intergenic | 25.0% |
| ! | TAGATTCCTATACACAATAA+AGG | + | chr4_1:76311454-76311473 | None:intergenic | 25.0% |
| ! | TTAATTAATGCAAAGAAGCT+AGG | - | chr4_1:76311863-76311882 | Msa0573220:intron | 25.0% |
| ! | TAACCAAACAACTTAGTATT+GGG | - | chr4_1:76311962-76311981 | Msa0573220:intron | 25.0% |
| !!! | TAAAAAGTGTTGTCAAATAG+TGG | - | chr4_1:76312139-76312158 | Msa0573220:intron | 25.0% |
| !! | GAAGTATTTCCATTTGATTA+TGG | - | chr4_1:76312371-76312390 | Msa0573220:intron | 25.0% |
| !!! | TGCATTTTTTAACGAAATCT+AGG | + | chr4_1:76312480-76312499 | None:intergenic | 25.0% |
| ! | GAAAGCCAAATATATTAGTA+TGG | - | chr4_1:76312508-76312527 | Msa0573220:intron | 25.0% |
| ! | CGTAACCATACTAATATATT+TGG | + | chr4_1:76312516-76312535 | None:intergenic | 25.0% |
| ! | TATCTATTTATTTACCTGAC+TGG | - | chr4_1:76312924-76312943 | Msa0573220:intron | 25.0% |
| !! | CAGTTTTCTTGCATTTAATT+AGG | - | chr4_1:76313479-76313498 | Msa0573220:intron | 25.0% |
| !!! | ATTTAATTAGGCTTTGAACT+CGG | - | chr4_1:76313491-76313510 | Msa0573220:intron | 25.0% |
| ! | ATGTAGTATTCTATGATGTA+GGG | - | chr4_1:76313650-76313669 | Msa0573220:intron | 25.0% |
| ! | ATGTAAAAAAGAAAAAGGGA+GGG | + | chr4_1:76313766-76313785 | None:intergenic | 25.0% |
| ! | AATGTAAAAAAGAAAAAGGG+AGG | + | chr4_1:76313767-76313786 | None:intergenic | 25.0% |
| ! | ACTAGAAACTTACATTTACT+TGG | + | chr4_1:76313880-76313899 | None:intergenic | 25.0% |
| ! | CAAATGGAAAATGTGAATAA+AGG | + | chr4_1:76314026-76314045 | None:intergenic | 25.0% |
| !! | CTTTATTCACATTTTCCATT+TGG | - | chr4_1:76314024-76314043 | Msa0573220:intron | 25.0% |
| !!! | TATTTTCTGAGAATTACTAC+TGG | - | chr4_1:76314243-76314262 | Msa0573220:CDS | 25.0% |
| ! | TTCTATAGATACAAGAAACT+TGG | - | chr4_1:76314467-76314486 | Msa0573220:intron | 25.0% |
| !! | CATATATTTCTGCTTGAAAA+AGG | - | chr4_1:76314504-76314523 | Msa0573220:CDS | 25.0% |
| !! | TGGCTTAAAATTTGACTTGA+AGG | + | chr4_1:76308499-76308518 | None:intergenic | 30.0% |
| ! | TTCAAGTCAAATTTTAAGCC+AGG | - | chr4_1:76308498-76308517 | Msa0573220:CDS | 30.0% |
| CTTCAACAATGCAAATTCAA+AGG | + | chr4_1:76308748-76308767 | None:intergenic | 30.0% | |
| !! | AGAACTTGATTTGCAAAAAC+AGG | - | chr4_1:76309007-76309026 | Msa0573220:CDS | 30.0% |
| ! | TCTGTTCTGATTTGTAATGT+AGG | + | chr4_1:76309116-76309135 | None:intergenic | 30.0% |
| ATATACAGGGAAATTAGGAA+AGG | - | chr4_1:76309147-76309166 | Msa0573220:CDS | 30.0% | |
| TATACAGGGAAATTAGGAAA+GGG | - | chr4_1:76309148-76309167 | Msa0573220:CDS | 30.0% | |
| TATTTGAATGGTAGGAAATG+CGG | - | chr4_1:76309202-76309221 | Msa0573220:intron | 30.0% | |
| GCTAATAGTGAAAAGATCAA+CGG | - | chr4_1:76309238-76309257 | Msa0573220:intron | 30.0% | |
| AGATCAACGGTATAAACAAA+AGG | - | chr4_1:76309251-76309270 | Msa0573220:intron | 30.0% | |
| !! | TTTGTTATTTATCGGGATGT+TGG | - | chr4_1:76309313-76309332 | Msa0573220:CDS | 30.0% |
| ACATACCCAAACAACATATT+TGG | - | chr4_1:76309347-76309366 | Msa0573220:CDS | 30.0% | |
| ! | ACGAACCAAATATGTTGTTT+GGG | + | chr4_1:76309355-76309374 | None:intergenic | 30.0% |
| TACGAACCAAATATGTTGTT+TGG | + | chr4_1:76309356-76309375 | None:intergenic | 30.0% | |
| ! | CAACATATTTGGTTCGTATT+TGG | - | chr4_1:76309358-76309377 | Msa0573220:intron | 30.0% |
| GACTATAAAACTATGAACCA+TGG | + | chr4_1:76309391-76309410 | None:intergenic | 30.0% | |
| !!! | TTCATAGTTTTATAGTCCCT+TGG | - | chr4_1:76309394-76309413 | Msa0573220:intron | 30.0% |
| ! | TCCCATATAGTAGTTTTCTT+TGG | - | chr4_1:76309671-76309690 | Msa0573220:intron | 30.0% |
| GACCAAAGAAAACTACTATA+TGG | + | chr4_1:76309676-76309695 | None:intergenic | 30.0% | |
| ! | TCTACTATGGTGTTTCTAAT+GGG | - | chr4_1:76309749-76309768 | Msa0573220:intron | 30.0% |
| TGTGTGTCTATTATGGATAT+TGG | - | chr4_1:76310059-76310078 | Msa0573220:intron | 30.0% | |
| TGTTTCAGTATATTACTTGC+AGG | - | chr4_1:76310217-76310236 | Msa0573220:intron | 30.0% | |
| TAAACCAAGTTAACCTTTGT+AGG | - | chr4_1:76310405-76310424 | Msa0573220:intron | 30.0% | |
| TATTTAAACCGTGTAACTTG+TGG | + | chr4_1:76310502-76310521 | None:intergenic | 30.0% | |
| GTTACACGGTTTAAATATCT+TGG | - | chr4_1:76310505-76310524 | Msa0573220:intron | 30.0% | |
| TAAACCATGGAATTTAAGCT+GGG | - | chr4_1:76310571-76310590 | Msa0573220:intron | 30.0% | |
| GTGGTAAAATTAGACAAGAT+AGG | - | chr4_1:76310776-76310795 | Msa0573220:intron | 30.0% | |
| ACCTATAGTAGAAAAGATTG+TGG | - | chr4_1:76310835-76310854 | Msa0573220:intron | 30.0% | |
| ! | TCCACAATCTTTTCTACTAT+AGG | + | chr4_1:76310839-76310858 | None:intergenic | 30.0% |
| TAGAAAAGATTGTGGAAACT+AGG | - | chr4_1:76310843-76310862 | Msa0573220:intron | 30.0% | |
| TGGTATTTGATAGAACACTA+TGG | - | chr4_1:76310935-76310954 | Msa0573220:intron | 30.0% | |
| AAGTCAAAATAATAGAGGTC+AGG | + | chr4_1:76311045-76311064 | None:intergenic | 30.0% | |
| !!! | TGACCTCTATTATTTTGACT+TGG | - | chr4_1:76311044-76311063 | Msa0573220:intron | 30.0% |
| TTGCCAAGTCAAAATAATAG+AGG | + | chr4_1:76311050-76311069 | None:intergenic | 30.0% | |
| AATATTATCTGATCCTGTGT+TGG | + | chr4_1:76311162-76311181 | None:intergenic | 30.0% | |
| AGATATTAAGAGTAAAGCAG+TGG | + | chr4_1:76311213-76311232 | None:intergenic | 30.0% | |
| CTGCTTTACTCTTAATATCT+TGG | - | chr4_1:76311213-76311232 | Msa0573220:intron | 30.0% | |
| GATTAGGTTAATCAAACATC+TGG | - | chr4_1:76311285-76311304 | Msa0573220:intron | 30.0% | |
| AGCTTACAATTCAAAGCAAA+AGG | + | chr4_1:76311549-76311568 | None:intergenic | 30.0% | |
| CAATTCTGCTTACTTAAGAA+TGG | - | chr4_1:76311613-76311632 | Msa0573220:intron | 30.0% | |
| CTAACCAAACAACTTAGTAT+TGG | - | chr4_1:76311961-76311980 | Msa0573220:intron | 30.0% | |
| !!! | ATGGTTTTGAACAACCATTT+AGG | - | chr4_1:76312031-76312050 | Msa0573220:intron | 30.0% |
| ACAAGCAATGTTGTCAATAA+CGG | + | chr4_1:76312233-76312252 | None:intergenic | 30.0% | |
| GTATTTCCATTTGATTATGG+TGG | - | chr4_1:76312374-76312393 | Msa0573220:intron | 30.0% | |
| CACTTTAATGACAGAATATG+GGG | + | chr4_1:76312400-76312419 | None:intergenic | 30.0% | |
| GCACTTTAATGACAGAATAT+GGG | + | chr4_1:76312401-76312420 | None:intergenic | 30.0% | |
| AGCACTTTAATGACAGAATA+TGG | + | chr4_1:76312402-76312421 | None:intergenic | 30.0% | |
| TGTGTAAGAGTAAGATCATA+TGG | + | chr4_1:76312442-76312461 | None:intergenic | 30.0% | |
| !! | ATGACAGAAAATTTTGATGC+TGG | - | chr4_1:76312554-76312573 | Msa0573220:intron | 30.0% |
| TAGGCAAATAGCTAAATGTA+TGG | - | chr4_1:76312632-76312651 | Msa0573220:intron | 30.0% | |
| AGATCTCAACACAGTTAAAA+GGG | + | chr4_1:76313134-76313153 | None:intergenic | 30.0% | |
| ACAGTCTTAATAGATAGCAA+GGG | + | chr4_1:76313234-76313253 | None:intergenic | 30.0% | |
| TATCTATTAAGACTGTGTGA+TGG | - | chr4_1:76313238-76313257 | Msa0573220:intron | 30.0% | |
| TAACATTACCTCTGGTAAAT+AGG | + | chr4_1:76313585-76313604 | None:intergenic | 30.0% | |
| CTACATGAATCACTAAACAA+AGG | + | chr4_1:76313636-76313655 | None:intergenic | 30.0% | |
| CATGTAGTATTCTATGATGT+AGG | - | chr4_1:76313649-76313668 | Msa0573220:intron | 30.0% | |
| AACAACTCCAATATATCTTC+TGG | + | chr4_1:76313686-76313705 | None:intergenic | 30.0% | |
| ! | TAAAAGAATCTACTTGCTGA+CGG | + | chr4_1:76313724-76313743 | None:intergenic | 30.0% |
| GATTATATATTTATCGCTGC+AGG | - | chr4_1:76313810-76313829 | Msa0573220:intron | 30.0% | |
| TGGAAAATGTGAATAAAGGT+GGG | + | chr4_1:76314022-76314041 | None:intergenic | 30.0% | |
| ATGGAAAATGTGAATAAAGG+TGG | + | chr4_1:76314023-76314042 | None:intergenic | 30.0% | |
| ! | CACATTTTCCATTTGGTATA+CGG | - | chr4_1:76314031-76314050 | Msa0573220:intron | 30.0% |
| ! | ACAAATTTGCTTTCTAGTAC+TGG | - | chr4_1:76314070-76314089 | Msa0573220:intron | 30.0% |
| TTGCTAATGAGTACAATACT+TGG | - | chr4_1:76314112-76314131 | Msa0573220:intron | 30.0% | |
| TTCAAAGTTTCATGTCTTGT+AGG | - | chr4_1:76314140-76314159 | Msa0573220:intron | 30.0% | |
| !!! | ACAAGAAACTTGGTTTTTTG+TGG | - | chr4_1:76314477-76314496 | Msa0573220:intron | 30.0% |
| TTCTTTAACTGGTATAACTC+CGG | + | chr4_1:76314698-76314717 | None:intergenic | 30.0% | |
| AATAAGAATAAGACAGGGGT+CGG | - | chr4_1:76308086-76308105 | Msa0573220:three_prime_UTR | 35.0% | |
| CTATGTGAAAGTGAAAGTGA+GGG | + | chr4_1:76308149-76308168 | None:intergenic | 35.0% | |
| TACTCAACTCAATTCGATGA+TGG | + | chr4_1:76308194-76308213 | None:intergenic | 35.0% | |
| TAGAGTGCGAAATATGAAGT+TGG | + | chr4_1:76308234-76308253 | None:intergenic | 35.0% | |
| AACTTCATATTTCGCACTCT+AGG | - | chr4_1:76308233-76308252 | Msa0573220:three_prime_UTR | 35.0% | |
| ACTTCATATTTCGCACTCTA+GGG | - | chr4_1:76308234-76308253 | Msa0573220:three_prime_UTR | 35.0% | |
| TGGTTTCAGTAAACTGCAAA+AGG | + | chr4_1:76308309-76308328 | None:intergenic | 35.0% | |
| !! | ATTTGACTTGAAGGTTACAG+TGG | + | chr4_1:76308490-76308509 | None:intergenic | 35.0% |
| ! | AATTTTAAGCCAGGAAGATC+TGG | - | chr4_1:76308507-76308526 | Msa0573220:CDS | 35.0% |
| ! | ATTTTAAGCCAGGAAGATCT+GGG | - | chr4_1:76308508-76308527 | Msa0573220:CDS | 35.0% |
| AAATGTCACTAGAGGGAAAA+AGG | - | chr4_1:76308624-76308643 | Msa0573220:intron | 35.0% | |
| AATGTCACTAGAGGGAAAAA+GGG | - | chr4_1:76308625-76308644 | Msa0573220:intron | 35.0% | |
| TCAAAGGGATGTTAAAAGCA+AGG | + | chr4_1:76308732-76308751 | None:intergenic | 35.0% | |
| !!! | AAGTGGTTGTTTTTGTCTCA+GGG | - | chr4_1:76308821-76308840 | Msa0573220:intron | 35.0% |
| TGACTCATCGTAGAATTGAT+AGG | - | chr4_1:76308980-76308999 | Msa0573220:intron | 35.0% | |
| TGTAATGTAGGAGTGGTTAT+AGG | + | chr4_1:76309104-76309123 | None:intergenic | 35.0% | |
| ! | TCTGATTTGTAATGTAGGAG+TGG | + | chr4_1:76309111-76309130 | None:intergenic | 35.0% |
| ATACAGGGAAATTAGGAAAG+GGG | - | chr4_1:76309149-76309168 | Msa0573220:CDS | 35.0% | |
| TATTTATCGGGATGTTGGTA+CGG | - | chr4_1:76309318-76309337 | Msa0573220:CDS | 35.0% | |
| !!! | TTTTTTTCACAAAGTGGGGT+TGG | - | chr4_1:76309566-76309585 | Msa0573220:intron | 35.0% |
| ! | TAACATGCAACAGAGCATTA+TGG | + | chr4_1:76309608-76309627 | None:intergenic | 35.0% |
| ! | CTCTACTATGGTGTTTCTAA+TGG | - | chr4_1:76309748-76309767 | Msa0573220:intron | 35.0% |
| TAAAAGATGGTACTCGTCTT+AGG | + | chr4_1:76309799-76309818 | None:intergenic | 35.0% | |
| AGCTGCTATGACATAAAAGA+TGG | + | chr4_1:76309812-76309831 | None:intergenic | 35.0% | |
| TGTGTTTCAAAGGGTAAGTT+GGG | + | chr4_1:76309837-76309856 | None:intergenic | 35.0% | |
| TAGAGTGAGTGTGTTTCAAA+GGG | + | chr4_1:76309846-76309865 | None:intergenic | 35.0% | |
| ATAGAGTGAGTGTGTTTCAA+AGG | + | chr4_1:76309847-76309866 | None:intergenic | 35.0% | |
| TGAAACACACTCACTCTATA+TGG | - | chr4_1:76309848-76309867 | Msa0573220:CDS | 35.0% | |
| GAAACACACTCACTCTATAT+GGG | - | chr4_1:76309849-76309868 | Msa0573220:CDS | 35.0% | |
| AGAGAGAGAGAGAGTTAATA+AGG | + | chr4_1:76310010-76310029 | None:intergenic | 35.0% | |
| TCATTGTGACATACTAAAGG+AGG | + | chr4_1:76310160-76310179 | None:intergenic | 35.0% | |
| TATATTACTTGCAGGACCTA+TGG | - | chr4_1:76310225-76310244 | Msa0573220:intron | 35.0% | |
| TGTTAGAAGTGAACAAGTGT+TGG | - | chr4_1:76310316-76310335 | Msa0573220:intron | 35.0% | |
| GTTAGAAGTGAACAAGTGTT+GGG | - | chr4_1:76310317-76310336 | Msa0573220:intron | 35.0% | |
| TGTACCTAAATTCACACAGA+AGG | - | chr4_1:76310378-76310397 | Msa0573220:intron | 35.0% | |
| TATGCCTTCTGTGTGAATTT+AGG | + | chr4_1:76310385-76310404 | None:intergenic | 35.0% | |
| GTATCCTACAAAGGTTAACT+TGG | + | chr4_1:76310412-76310431 | None:intergenic | 35.0% | |
| TGTTTGAACGTATCCTACAA+AGG | + | chr4_1:76310421-76310440 | None:intergenic | 35.0% | |
| GTCATATACCACAAGTTACA+CGG | - | chr4_1:76310491-76310510 | Msa0573220:intron | 35.0% | |
| CATTCCATAGTGCTAAACAA+CGG | - | chr4_1:76310531-76310550 | Msa0573220:intron | 35.0% | |
| CTAAACAACGGAGAAATAGA+AGG | - | chr4_1:76310543-76310562 | Msa0573220:intron | 35.0% | |
| ATAGAAGGAGATGTAAACCA+TGG | - | chr4_1:76310558-76310577 | Msa0573220:intron | 35.0% | |
| GTAAACCATGGAATTTAAGC+TGG | - | chr4_1:76310570-76310589 | Msa0573220:intron | 35.0% | |
| ACTGTCTCGTACAACATTAT+CGG | + | chr4_1:76310685-76310704 | None:intergenic | 35.0% | |
| CAAAGATGAAGATGTTGAGT+TGG | - | chr4_1:76310749-76310768 | Msa0573220:intron | 35.0% | |
| TCAGATAATATTTCCGAACG+AGG | - | chr4_1:76311170-76311189 | Msa0573220:intron | 35.0% | |
| ATATTCTGACCTCTGATTCT+TGG | - | chr4_1:76311259-76311278 | Msa0573220:intron | 35.0% | |
| CTAATCAAACCAAGAATCAG+AGG | + | chr4_1:76311271-76311290 | None:intergenic | 35.0% | |
| ! | CTCTGATTCTTGGTTTGATT+AGG | - | chr4_1:76311269-76311288 | Msa0573220:intron | 35.0% |
| AGGTTAATCAAACATCTGGA+AGG | - | chr4_1:76311289-76311308 | Msa0573220:intron | 35.0% | |
| GGTTAATCAAACATCTGGAA+GGG | - | chr4_1:76311290-76311309 | Msa0573220:intron | 35.0% | |
| ATGACAGAAAGTTCTTCTTC+TGG | - | chr4_1:76311337-76311356 | Msa0573220:CDS | 35.0% | |
| AAAATACTTAGGGAGACAAG+TGG | + | chr4_1:76311390-76311409 | None:intergenic | 35.0% | |
| CCTATACACAATAAAGGTTC+AGG | + | chr4_1:76311448-76311467 | None:intergenic | 35.0% | |
| CCTGAACCTTTATTGTGTAT+AGG | - | chr4_1:76311445-76311464 | Msa0573220:intron | 35.0% | |
| AAGGAGAGATACTTACCTAA+TGG | + | chr4_1:76311530-76311549 | None:intergenic | 35.0% | |
| AGGCTTACACGTTAATAGAA+AGG | + | chr4_1:76311573-76311592 | None:intergenic | 35.0% | |
| TCTTAAGTAAGCAGAATTGC+AGG | + | chr4_1:76311612-76311631 | None:intergenic | 35.0% | |
| GTACCCAATACTAAGTTGTT+TGG | + | chr4_1:76311968-76311987 | None:intergenic | 35.0% | |
| TGGTTGTTCAAAACCATACA+GGG | + | chr4_1:76312028-76312047 | None:intergenic | 35.0% | |
| ATGGTTGTTCAAAACCATAC+AGG | + | chr4_1:76312029-76312048 | None:intergenic | 35.0% | |
| TGTGCACAAGTATTCCTAAA+TGG | + | chr4_1:76312048-76312067 | None:intergenic | 35.0% | |
| TTTACGTGAACATGCAATAC+AGG | - | chr4_1:76312349-76312368 | Msa0573220:intron | 35.0% | |
| TGATCTTACTCTTACACATG+TGG | - | chr4_1:76312444-76312463 | Msa0573220:intron | 35.0% | |
| ATTAGTATGGTTACGTACAC+AGG | - | chr4_1:76312521-76312540 | Msa0573220:intron | 35.0% | |
| ! | GATGCTGGTAACCTTTTATT+TGG | - | chr4_1:76312569-76312588 | Msa0573220:intron | 35.0% |
| !! | TTTGCCTATGTCACTTTGAA+AGG | + | chr4_1:76312620-76312639 | None:intergenic | 35.0% |
| GTATCTTCAGAAACTTCAAG+CGG | + | chr4_1:76312761-76312780 | None:intergenic | 35.0% | |
| ! | GCTTGAAGTTTCTGAAGATA+CGG | - | chr4_1:76312760-76312779 | Msa0573220:intron | 35.0% |
| GAATATCCAAACTAAGTACC+TGG | + | chr4_1:76312804-76312823 | None:intergenic | 35.0% | |
| GATATGCAATGCACTAGTAA+GGG | + | chr4_1:76312908-76312927 | None:intergenic | 35.0% | |
| AGATATGCAATGCACTAGTA+AGG | + | chr4_1:76312909-76312928 | None:intergenic | 35.0% | |
| ATCTTCTGGTCCAGTTAAAT+TGG | - | chr4_1:76313031-76313050 | Msa0573220:intron | 35.0% | |
| CAATGTTGCTCAATATTCTC+TGG | + | chr4_1:76313064-76313083 | None:intergenic | 35.0% | |
| CAGAGAATATTGAGCAACAT+TGG | - | chr4_1:76313062-76313081 | Msa0573220:intron | 35.0% | |
| CAGATCTCAACACAGTTAAA+AGG | + | chr4_1:76313135-76313154 | None:intergenic | 35.0% | |
| CACAGTCTTAATAGATAGCA+AGG | + | chr4_1:76313235-76313254 | None:intergenic | 35.0% | |
| AAAACTGTATCCCATGATGA+GGG | - | chr4_1:76313372-76313391 | Msa0573220:intron | 35.0% | |
| ATCAATGGCAATATCAGATC+AGG | + | chr4_1:76313530-76313549 | None:intergenic | 35.0% | |
| TGATCTGATATTGCCATTGA+TGG | - | chr4_1:76313529-76313548 | Msa0573220:intron | 35.0% | |
| CATTGGTATAACATTACCTC+TGG | + | chr4_1:76313593-76313612 | None:intergenic | 35.0% | |
| ACGAAAAGTCAATGCTACAT+TGG | + | chr4_1:76313610-76313629 | None:intergenic | 35.0% | |
| ! | ATTCTATGATGTAGGGTACT+TGG | - | chr4_1:76313657-76313676 | Msa0573220:intron | 35.0% |
| TTGGTCTCCAGAAGATATAT+TGG | - | chr4_1:76313676-76313695 | Msa0573220:intron | 35.0% | |
| ACTTGGATCAATTCCAAACT+GGG | + | chr4_1:76313863-76313882 | None:intergenic | 35.0% | |
| TACTTGGATCAATTCCAAAC+TGG | + | chr4_1:76313864-76313883 | None:intergenic | 35.0% | |
| AAAATGTGAATAAAGGTGGG+AGG | + | chr4_1:76314019-76314038 | None:intergenic | 35.0% | |
| TTTCATGTCTTGTAGGTTTC+AGG | - | chr4_1:76314147-76314166 | Msa0573220:intron | 35.0% | |
| AATGAAGGAAAAAAGATGCG+AGG | - | chr4_1:76314218-76314237 | Msa0573220:CDS | 35.0% | |
| !! | GTTCACAGTTTTGTCTTTTC+TGG | - | chr4_1:76314322-76314341 | Msa0573220:intron | 35.0% |
| GCTATGTGAAAGTGAAAGTG+AGG | + | chr4_1:76308150-76308169 | None:intergenic | 40.0% | |
| AAATATGAAGTTGGAGTCGG+AGG | + | chr4_1:76308225-76308244 | None:intergenic | 40.0% | |
| GCGAAATATGAAGTTGGAGT+CGG | + | chr4_1:76308228-76308247 | None:intergenic | 40.0% | |
| AGTAAACTGCAAAAGGAGCA+AGG | + | chr4_1:76308302-76308321 | None:intergenic | 40.0% | |
| GAGATTATTACCTGGATTGC+AGG | + | chr4_1:76308360-76308379 | None:intergenic | 40.0% | |
| !! | GGTTTGTTATGTCTGTTGAC+AGG | - | chr4_1:76308574-76308593 | Msa0573220:intron | 40.0% |
| TGCTGGTAAAATGTCACTAG+AGG | - | chr4_1:76308616-76308635 | Msa0573220:intron | 40.0% | |
| GCTGGTAAAATGTCACTAGA+GGG | - | chr4_1:76308617-76308636 | Msa0573220:intron | 40.0% | |
| CCACTTCAACTAAAAACCAG+CGG | + | chr4_1:76308807-76308826 | None:intergenic | 40.0% | |
| !!! | GAAGTGGTTGTTTTTGTCTC+AGG | - | chr4_1:76308820-76308839 | Msa0573220:intron | 40.0% |
| !!! | AGGGACTAGTTCATTTTCAG+TGG | - | chr4_1:76308849-76308868 | Msa0573220:intron | 40.0% |
| ATTTATCGGGATGTTGGTAC+GGG | - | chr4_1:76309319-76309338 | Msa0573220:CDS | 40.0% | |
| ! | CAACAGAGCATTATGGCATA+TGG | + | chr4_1:76309601-76309620 | None:intergenic | 40.0% |
| TGTTGGATCGGTCAAATAGT+TGG | + | chr4_1:76309710-76309729 | None:intergenic | 40.0% | |
| AGATGGAGGAAATGTTGGAT+CGG | + | chr4_1:76309722-76309741 | None:intergenic | 40.0% | |
| ! | TTAGGTGATTCGGAAATGTG+TGG | + | chr4_1:76309781-76309800 | None:intergenic | 40.0% |
| GTGTTTCAAAGGGTAAGTTG+GGG | + | chr4_1:76309836-76309855 | None:intergenic | 40.0% | |
| GTGTGTTTCAAAGGGTAAGT+TGG | + | chr4_1:76309838-76309857 | None:intergenic | 40.0% | |
| CTCTCGTTGTGTGTCTATTA+TGG | - | chr4_1:76310052-76310071 | Msa0573220:intron | 40.0% | |
| ATACTAAAGGAGGAAAGTGG+AGG | + | chr4_1:76310150-76310169 | None:intergenic | 40.0% | |
| GACATACTAAAGGAGGAAAG+TGG | + | chr4_1:76310153-76310172 | None:intergenic | 40.0% | |
| CTGTGTGAATTTAGGTACAG+TGG | + | chr4_1:76310377-76310396 | None:intergenic | 40.0% | |
| TTCCTGCACTTTGTGAAAGT+TGG | - | chr4_1:76310461-76310480 | Msa0573220:intron | 40.0% | |
| TTCCAACTTTCACAAAGTGC+AGG | + | chr4_1:76310466-76310485 | None:intergenic | 40.0% | |
| CGTTGTTTAGCACTATGGAA+TGG | + | chr4_1:76310533-76310552 | None:intergenic | 40.0% | |
| TTCTCCGTTGTTTAGCACTA+TGG | + | chr4_1:76310538-76310557 | None:intergenic | 40.0% | |
| AAGCTGGGTGGTTAAAATAG+AGG | - | chr4_1:76310586-76310605 | Msa0573220:intron | 40.0% | |
| CGTGTCACATAAAACACATG+AGG | + | chr4_1:76310616-76310635 | None:intergenic | 40.0% | |
| !! | AAAGTACTGCTCAAGCTGAA+TGG | - | chr4_1:76310636-76310655 | Msa0573220:intron | 40.0% |
| !! | AAGATGTTGAGTTGGATGTG+TGG | - | chr4_1:76310757-76310776 | Msa0573220:intron | 40.0% |
| ATGACAACATTGGAGAGAGT+TGG | - | chr4_1:76310806-76310825 | Msa0573220:intron | 40.0% | |
| TGACAACATTGGAGAGAGTT+GGG | - | chr4_1:76310807-76310826 | Msa0573220:intron | 40.0% | |
| AGATTGTGGAAACTAGGCTT+AGG | - | chr4_1:76310849-76310868 | Msa0573220:intron | 40.0% | |
| TGCTCAAAAATAGCCTCGTT+CGG | + | chr4_1:76311186-76311205 | None:intergenic | 40.0% | |
| AAAGTTCTTCTTCTGGATGC+AGG | - | chr4_1:76311344-76311363 | Msa0573220:CDS | 40.0% | |
| GATTACCTCAACAGACCATT+AGG | - | chr4_1:76311512-76311531 | Msa0573220:CDS | 40.0% | |
| ACTTACCTAATGGTCTGTTG+AGG | + | chr4_1:76311520-76311539 | None:intergenic | 40.0% | |
| ATGTTGTCAATAACGGTCGT+GGG | + | chr4_1:76312226-76312245 | None:intergenic | 40.0% | |
| AATGTTGTCAATAACGGTCG+TGG | + | chr4_1:76312227-76312246 | None:intergenic | 40.0% | |
| GCAACCTTTCAAAGTGACAT+AGG | - | chr4_1:76312613-76312632 | Msa0573220:intron | 40.0% | |
| ! | AGCGTGTTACTCTTTACTTC+TGG | + | chr4_1:76312680-76312699 | None:intergenic | 40.0% |
| TTCAGAAACTTCAAGCGGAA+GGG | + | chr4_1:76312756-76312775 | None:intergenic | 40.0% | |
| TTGAAGATGACATCTCATCC+AGG | - | chr4_1:76312783-76312802 | Msa0573220:intron | 40.0% | |
| TCTCATCCAGGTACTTAGTT+TGG | - | chr4_1:76312795-76312814 | Msa0573220:intron | 40.0% | |
| CAATGCACTAGTAAGGGATT+TGG | + | chr4_1:76312902-76312921 | None:intergenic | 40.0% | |
| ! | CAAACTTTTAGTGTCCAGTC+AGG | + | chr4_1:76312941-76312960 | None:intergenic | 40.0% |
| ACTAGCGATGTAACATCTTC+TGG | - | chr4_1:76313017-76313036 | Msa0573220:intron | 40.0% | |
| TGGAGATCTGCCAATTTAAC+TGG | + | chr4_1:76313044-76313063 | None:intergenic | 40.0% | |
| TGTAACTTATTACCTGCAGC+AGG | + | chr4_1:76313089-76313108 | None:intergenic | 40.0% | |
| CAAAACTGTATCCCATGATG+AGG | - | chr4_1:76313371-76313390 | Msa0573220:intron | 40.0% | |
| AAACTGTATCCCATGATGAG+GGG | - | chr4_1:76313373-76313392 | Msa0573220:intron | 40.0% | |
| ATACTAATGCCCCTCATCAT+GGG | + | chr4_1:76313385-76313404 | None:intergenic | 40.0% | |
| GGCATTAGTATGCAGTTTGA+CGG | - | chr4_1:76313394-76313413 | Msa0573220:intron | 40.0% | |
| GCATTAGTATGCAGTTTGAC+GGG | - | chr4_1:76313395-76313414 | Msa0573220:intron | 40.0% | |
| ! | AATGGTAACGTCTCCATCAA+TGG | + | chr4_1:76313545-76313564 | None:intergenic | 40.0% |
| ATTGATGGAGACGTTACCAT+TGG | - | chr4_1:76313544-76313563 | Msa0573220:intron | 40.0% | |
| ! | TCTAGCTTCCTATTTACCAG+AGG | - | chr4_1:76313574-76313593 | Msa0573220:intron | 40.0% |
| CAGATAGATTTGTCCCAGTT+TGG | - | chr4_1:76313847-76313866 | Msa0573220:intron | 40.0% | |
| TCTCCAATCTAGTGTGTTGT+AGG | - | chr4_1:76313980-76313999 | Msa0573220:CDS | 40.0% | |
| CTCCAATCTAGTGTGTTGTA+GGG | - | chr4_1:76313981-76314000 | Msa0573220:CDS | 40.0% | |
| TTCCATTTGGTATACGGTAG+AGG | - | chr4_1:76314037-76314056 | Msa0573220:intron | 40.0% | |
| ! | TTTGCTTTCTAGTACTGGAG+TGG | - | chr4_1:76314075-76314094 | Msa0573220:intron | 40.0% |
| !!! | CTGATTCTTTGTTTTCCCCT+TGG | - | chr4_1:76314292-76314311 | Msa0573220:intron | 40.0% |
| !! | CACAGTTTTGTCTTTTCTGG+AGG | - | chr4_1:76314325-76314344 | Msa0573220:intron | 40.0% |
| ATCTCAATCTTGTACCCCAA+TGG | - | chr4_1:76314406-76314425 | Msa0573220:intron | 40.0% | |
| CTACTTGGATTCATCCATTG+GGG | + | chr4_1:76314423-76314442 | None:intergenic | 40.0% | |
| GCTACTTGGATTCATCCATT+GGG | + | chr4_1:76314424-76314443 | None:intergenic | 40.0% | |
| AATATCCGATGTCTCTCAGA+AGG | - | chr4_1:76314628-76314647 | Msa0573220:intron | 40.0% | |
| ! | CATAACCTTCTGAGAGACAT+CGG | + | chr4_1:76314636-76314655 | None:intergenic | 40.0% |
| GATGTCTCTCAGAAGGTTAT+GGG | - | chr4_1:76314635-76314654 | Msa0573220:intron | 40.0% | |
| TTAACTGGTATAACTCCGGA+TGG | + | chr4_1:76314694-76314713 | None:intergenic | 40.0% | |
| CGATGGAAGATGAACTCATC+TGG | + | chr4_1:76308329-76308348 | None:intergenic | 45.0% | |
| ! | TTTTACCAGCACGAAACTCC+AGG | + | chr4_1:76308607-76308626 | None:intergenic | 45.0% |
| !!! | CCGCTGGTTTTTAGTTGAAG+TGG | - | chr4_1:76308804-76308823 | Msa0573220:intron | 45.0% |
| !!! | GTTGTTTTTGTCTCAGGGTG+AGG | - | chr4_1:76308826-76308845 | Msa0573220:intron | 45.0% |
| ! | TTTTTGTCTCAGGGTGAGGA+GGG | - | chr4_1:76308830-76308849 | Msa0573220:intron | 45.0% |
| !! | TCGTATTTGGTGTGTTCCCA+TGG | - | chr4_1:76309371-76309390 | Msa0573220:intron | 45.0% |
| CGGTCAAATAGTTGGAGGTA+GGG | + | chr4_1:76309702-76309721 | None:intergenic | 45.0% | |
| TCGGTCAAATAGTTGGAGGT+AGG | + | chr4_1:76309703-76309722 | None:intergenic | 45.0% | |
| TGGATCGGTCAAATAGTTGG+AGG | + | chr4_1:76309707-76309726 | None:intergenic | 45.0% | |
| TGAGCAGATGGAGGAAATGT+TGG | + | chr4_1:76309727-76309746 | None:intergenic | 45.0% | |
| TAGTAGAGTTGAGCAGATGG+AGG | + | chr4_1:76309736-76309755 | None:intergenic | 45.0% | |
| CCATAGTAGAGTTGAGCAGA+TGG | + | chr4_1:76309739-76309758 | None:intergenic | 45.0% | |
| CCATCTGCTCAACTCTACTA+TGG | - | chr4_1:76309736-76309755 | Msa0573220:intron | 45.0% | |
| GGTACTCGTCTTAGGTGATT+CGG | + | chr4_1:76309791-76309810 | None:intergenic | 45.0% | |
| CAGGACCTATGGAAACTGTT+GGG | - | chr4_1:76310236-76310255 | Msa0573220:intron | 45.0% | |
| AGGACCTATGGAAACTGTTG+GGG | - | chr4_1:76310237-76310256 | Msa0573220:intron | 45.0% | |
| ACCATGGAATTTAAGCTGGG+TGG | - | chr4_1:76310574-76310593 | Msa0573220:intron | 45.0% | |
| ACCACCCAGCTTAAATTCCA+TGG | + | chr4_1:76310578-76310597 | None:intergenic | 45.0% | |
| GTTGTACGAGACAGTGTTCT+AGG | - | chr4_1:76310690-76310709 | Msa0573220:intron | 45.0% | |
| GACAACATTGGAGAGAGTTG+GGG | - | chr4_1:76310808-76310827 | Msa0573220:intron | 45.0% | |
| TTGTGGAAACTAGGCTTAGG+TGG | - | chr4_1:76310852-76310871 | Msa0573220:intron | 45.0% | |
| GAAACTAGGCTTAGGTGGTT+TGG | - | chr4_1:76310857-76310876 | Msa0573220:intron | 45.0% | |
| ! | AAGCCTTGTCCTACTAAGTG+GGG | + | chr4_1:76310984-76311003 | None:intergenic | 45.0% |
| ! | CAAGCCTTGTCCTACTAAGT+GGG | + | chr4_1:76310985-76311004 | None:intergenic | 45.0% |
| AATAGAGGTCAGGAAAGAGC+AGG | + | chr4_1:76311035-76311054 | None:intergenic | 45.0% | |
| TTCTTGACCTAAGCCAACAC+AGG | - | chr4_1:76311146-76311165 | Msa0573220:intron | 45.0% | |
| !! | ATCTGATCCTGTGTTGGCTT+AGG | + | chr4_1:76311156-76311175 | None:intergenic | 45.0% |
| !!! | GAACGAGGCTATTTTTGAGC+AGG | - | chr4_1:76311185-76311204 | Msa0573220:intron | 45.0% |
| TTCTTCTTCTGGATGCAGGT+TGG | - | chr4_1:76311348-76311367 | Msa0573220:CDS | 45.0% | |
| AAACAGACTCACGCATCTGT+AGG | + | chr4_1:76311770-76311789 | None:intergenic | 45.0% | |
| TATCCGGTGCAAGTACATAC+CGG | + | chr4_1:76312001-76312020 | None:intergenic | 45.0% | |
| ! | AACCATACAGGGTGCTTATC+CGG | + | chr4_1:76312017-76312036 | None:intergenic | 45.0% |
| ATGGGGCCACCATAATCAAA+TGG | + | chr4_1:76312383-76312402 | None:intergenic | 45.0% | |
| TTCTCACTAACAGAGCTCCT+TGG | - | chr4_1:76312710-76312729 | Msa0573220:intron | 45.0% | |
| CATCAGGTTCTTCTTCACCA+AGG | + | chr4_1:76312730-76312749 | None:intergenic | 45.0% | |
| CTTCAGAAACTTCAAGCGGA+AGG | + | chr4_1:76312757-76312776 | None:intergenic | 45.0% | |
| GTTGGAAAGAGCTGCAAACT+TGG | - | chr4_1:76312968-76312987 | Msa0573220:intron | 45.0% | |
| AACTTGGTTGTCCCGAACTT+TGG | - | chr4_1:76312984-76313003 | Msa0573220:intron | 45.0% | |
| TTGCATCCACACCAAAGTTC+GGG | + | chr4_1:76312998-76313017 | None:intergenic | 45.0% | |
| GTTGCATCCACACCAAAGTT+CGG | + | chr4_1:76312999-76313018 | None:intergenic | 45.0% | |
| AGCATTCTTGATCCTGACGA+AGG | - | chr4_1:76313184-76313203 | Msa0573220:intron | 45.0% | |
| TCCTGACGAAGGTAATCACT+TGG | - | chr4_1:76313195-76313214 | Msa0573220:intron | 45.0% | |
| CATACTAATGCCCCTCATCA+TGG | + | chr4_1:76313386-76313405 | None:intergenic | 45.0% | |
| ! | GAATCTACTTGCTGACGGAA+AGG | + | chr4_1:76313719-76313738 | None:intergenic | 45.0% |
| GGAGAAGTAACAACTACAGC+TGG | + | chr4_1:76313965-76313984 | None:intergenic | 45.0% | |
| GTCCCTACAACACACTAGAT+TGG | + | chr4_1:76313986-76314005 | None:intergenic | 45.0% | |
| AGCCTCTACCGTATACCAAA+TGG | + | chr4_1:76314042-76314061 | None:intergenic | 45.0% | |
| ACTGTGAACTTGTCTGCCAA+GGG | + | chr4_1:76314311-76314330 | None:intergenic | 45.0% | |
| AACTGTGAACTTGTCTGCCA+AGG | + | chr4_1:76314312-76314331 | None:intergenic | 45.0% | |
| TCTCCAAGTCTGAGGAATCT+AGG | - | chr4_1:76314363-76314382 | Msa0573220:intron | 45.0% | |
| TTGCCTAGATTCCTCAGACT+TGG | + | chr4_1:76314369-76314388 | None:intergenic | 45.0% | |
| GGAATCTAGGCAAGATGATC+AGG | - | chr4_1:76314376-76314395 | Msa0573220:intron | 45.0% | |
| GGCTACTTGGATTCATCCAT+TGG | + | chr4_1:76314425-76314444 | None:intergenic | 45.0% | |
| ATGGATGAATCCAAGTAGCC+TGG | - | chr4_1:76314425-76314444 | Msa0573220:intron | 45.0% | |
| AAAGATGAAAGTAGCCTGCC+AGG | + | chr4_1:76314446-76314465 | None:intergenic | 45.0% | |
| CGATGTCTCTCAGAAGGTTA+TGG | - | chr4_1:76314634-76314653 | Msa0573220:intron | 45.0% | |
| ! | CTATATGTCGAGTTGCCATC+CGG | - | chr4_1:76314676-76314695 | Msa0573220:five_prime_UTR | 45.0% |
| !! | GATTGCAGGAAAAGCGTCGA+TGG | + | chr4_1:76308346-76308365 | None:intergenic | 50.0% |
| CGCTCGCTCTTTGCGTTTAT+TGG | - | chr4_1:76308409-76308428 | Msa0573220:exon | 50.0% | |
| TAAGCCAGGAAGATCTGGGA+TGG | - | chr4_1:76308512-76308531 | Msa0573220:CDS | 50.0% | |
| ACTTCCATCCCAGATCTTCC+TGG | + | chr4_1:76308519-76308538 | None:intergenic | 50.0% | |
| CTGTTGACAGGAAACTCTCC+TGG | - | chr4_1:76308586-76308605 | Msa0573220:intron | 50.0% | |
| GTAGTTCCTGATGCACGCAA+AGG | - | chr4_1:76308647-76308666 | Msa0573220:intron | 50.0% | |
| AAGGACTCGTTCGCATTGCT+AGG | - | chr4_1:76308666-76308685 | Msa0573220:intron | 50.0% | |
| AGGACTCGTTCGCATTGCTA+GGG | - | chr4_1:76308667-76308686 | Msa0573220:intron | 50.0% | |
| CTAAAAACCAGCGGCAGTCA+TGG | + | chr4_1:76308798-76308817 | None:intergenic | 50.0% | |
| ! | GTTTTTGTCTCAGGGTGAGG+AGG | - | chr4_1:76308829-76308848 | Msa0573220:intron | 50.0% |
| !! | TGGAGGAGTGTTGTTGCAAG+GGG | + | chr4_1:76310133-76310152 | None:intergenic | 50.0% |
| !! | GTGGAGGAGTGTTGTTGCAA+GGG | + | chr4_1:76310134-76310153 | None:intergenic | 50.0% |
| !! | AGTGGAGGAGTGTTGTTGCA+AGG | + | chr4_1:76310135-76310154 | None:intergenic | 50.0% |
| GCAGGACCTATGGAAACTGT+TGG | - | chr4_1:76310235-76310254 | Msa0573220:intron | 50.0% | |
| CCTTCCCCAACAGTTTCCAT+AGG | + | chr4_1:76310244-76310263 | None:intergenic | 50.0% | |
| CCTATGGAAACTGTTGGGGA+AGG | - | chr4_1:76310241-76310260 | Msa0573220:intron | 50.0% | |
| TGTAGCCAACCCCACTTAGT+AGG | - | chr4_1:76310972-76310991 | Msa0573220:intron | 50.0% | |
| CTTGTCCTACTAAGTGGGGT+TGG | + | chr4_1:76310980-76310999 | None:intergenic | 50.0% | |
| CAACCCCACTTAGTAGGACA+AGG | - | chr4_1:76310978-76310997 | Msa0573220:intron | 50.0% | |
| ! | CCAAGCCTTGTCCTACTAAG+TGG | + | chr4_1:76310986-76311005 | None:intergenic | 50.0% |
| CCACTTAGTAGGACAAGGCT+TGG | - | chr4_1:76310983-76311002 | Msa0573220:intron | 50.0% | |
| ! | GTAGGACAAGGCTTGGTTGA+TGG | - | chr4_1:76310990-76311009 | Msa0573220:intron | 50.0% |
| ! | ACGTGTAAGCCTTATGCCAG+TGG | - | chr4_1:76311581-76311600 | Msa0573220:intron | 50.0% |
| AGAATTGCAGGATCGTCCAC+TGG | + | chr4_1:76311600-76311619 | None:intergenic | 50.0% | |
| !! | AGTACATACCGGCTCTACGT+GGG | + | chr4_1:76311990-76312009 | None:intergenic | 50.0% |
| !! | AAGTACATACCGGCTCTACG+TGG | + | chr4_1:76311991-76312010 | None:intergenic | 50.0% |
| TCAAGCGGAAGGGATACATC+AGG | + | chr4_1:76312746-76312765 | None:intergenic | 50.0% | |
| GCCAAGTGATTACCTTCGTC+AGG | + | chr4_1:76313199-76313218 | None:intergenic | 50.0% | |
| ! | CTACTTGCTGACGGAAAGGT+GGG | + | chr4_1:76313715-76313734 | None:intergenic | 50.0% |
| ! | TCTACTTGCTGACGGAAAGG+TGG | + | chr4_1:76313716-76313735 | None:intergenic | 50.0% |
| TGTAGGTTTCAGGCGTGTGT+AGG | - | chr4_1:76314157-76314176 | Msa0573220:intron | 50.0% | |
| CTGTGAACTTGTCTGCCAAG+GGG | + | chr4_1:76314310-76314329 | None:intergenic | 50.0% | |
| !! | GTCTTTTCTGGAGGCTCTTG+AGG | - | chr4_1:76314334-76314353 | Msa0573220:intron | 50.0% |
| GGATTCTGTCTCCAAGTCTG+AGG | - | chr4_1:76314355-76314374 | Msa0573220:intron | 50.0% | |
| ATGAATCCAAGTAGCCTGGC+AGG | - | chr4_1:76314429-76314448 | Msa0573220:intron | 50.0% | |
| GAATAAGACAGGGGTCGGAG+CGG | - | chr4_1:76308091-76308110 | Msa0573220:three_prime_UTR | 55.0% | |
| ! | CGACGCTTTTCCTGCAATCC+AGG | - | chr4_1:76308347-76308366 | Msa0573220:three_prime_UTR | 55.0% |
| ACTCTCCTGGAGTTTCGTGC+TGG | - | chr4_1:76308599-76308618 | Msa0573220:intron | 55.0% | |
| ACGAGTCCTTTGCGTGCATC+AGG | + | chr4_1:76308656-76308675 | None:intergenic | 55.0% | |
| ATCTCAACCATGACTGCCGC+TGG | - | chr4_1:76308788-76308807 | Msa0573220:intron | 55.0% | |
| !! | GGAGGAGTGTTGTTGCAAGG+GGG | + | chr4_1:76310132-76310151 | None:intergenic | 55.0% |
| CAGGATCGTCCACTGGCATA+AGG | + | chr4_1:76311593-76311612 | None:intergenic | 55.0% | |
| ATTGGGTACCCACGTAGAGC+CGG | - | chr4_1:76311979-76311998 | Msa0573220:intron | 55.0% | |
| GAGCCGGTATGTACTTGCAC+CGG | - | chr4_1:76311995-76312014 | Msa0573220:intron | 55.0% | |
| CACCGGATAAGCACCCTGTA+TGG | - | chr4_1:76312012-76312031 | Msa0573220:intron | 55.0% | |
| GGTTGTCCCGAACTTTGGTG+TGG | - | chr4_1:76312989-76313008 | Msa0573220:intron | 55.0% | |
| AGCAACATTGGACCTGCTGC+AGG | - | chr4_1:76313074-76313093 | Msa0573220:intron | 55.0% | |
| GAAGCTAGACGCTGCTCCAA+TGG | + | chr4_1:76313563-76313582 | None:intergenic | 55.0% | |
| TCGCTGCAGGTACTTCGAAC+AGG | - | chr4_1:76313823-76313842 | Msa0573220:intron | 55.0% | |
| AAGTAGCCTGCCAGGCTACT+TGG | + | chr4_1:76314438-76314457 | None:intergenic | 55.0% | |
| GAGCGAGCGAGCGAGCGAAA+AGG | + | chr4_1:76308398-76308417 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 76308075 | 76314795 | 76308075 | ID=Msa0573220;Name=Msa0573220 |
| chr4_1 | mRNA | 76308075 | 76314795 | 76308075 | ID=Msa0573220-mRNA-1;Parent=Msa0573220;Name=Msa0573220-mRNA-1;_AED=0.15;_eAED=0.15;_QI=146|0.84|0.85|1|0.92|0.85|14|353|313 |
| chr4_1 | exon | 76308075 | 76308552 | 76308075 | ID=Msa0573220-mRNA-1:exon:26679;Parent=Msa0573220-mRNA-1 |
| chr4_1 | exon | 76308984 | 76309038 | 76308984 | ID=Msa0573220-mRNA-1:exon:26678;Parent=Msa0573220-mRNA-1 |
| chr4_1 | exon | 76309140 | 76309199 | 76309140 | ID=Msa0573220-mRNA-1:exon:26677;Parent=Msa0573220-mRNA-1 |
| chr4_1 | exon | 76309275 | 76309369 | 76309275 | ID=Msa0573220-mRNA-1:exon:26676;Parent=Msa0573220-mRNA-1 |
| chr4_1 | exon | 76309665 | 76309688 | 76309665 | ID=Msa0573220-mRNA-1:exon:26675;Parent=Msa0573220-mRNA-1 |
| chr4_1 | exon | 76309775 | 76309893 | 76309775 | ID=Msa0573220-mRNA-1:exon:26674;Parent=Msa0573220-mRNA-1 |
| chr4_1 | exon | 76310066 | 76310147 | 76310066 | ID=Msa0573220-mRNA-1:exon:26673;Parent=Msa0573220-mRNA-1 |
| chr4_1 | exon | 76311337 | 76311403 | 76311337 | ID=Msa0573220-mRNA-1:exon:26672;Parent=Msa0573220-mRNA-1 |
| chr4_1 | exon | 76311505 | 76311579 | 76311505 | ID=Msa0573220-mRNA-1:exon:26671;Parent=Msa0573220-mRNA-1 |
| chr4_1 | exon | 76311664 | 76311711 | 76311664 | ID=Msa0573220-mRNA-1:exon:26670;Parent=Msa0573220-mRNA-1 |
| chr4_1 | exon | 76313969 | 76314028 | 76313969 | ID=Msa0573220-mRNA-1:exon:26669;Parent=Msa0573220-mRNA-1 |
| chr4_1 | exon | 76314182 | 76314274 | 76314182 | ID=Msa0573220-mRNA-1:exon:26668;Parent=Msa0573220-mRNA-1 |
| chr4_1 | exon | 76314502 | 76314554 | 76314502 | ID=Msa0573220-mRNA-1:exon:26667;Parent=Msa0573220-mRNA-1 |
| chr4_1 | exon | 76314664 | 76314795 | 76314664 | ID=Msa0573220-mRNA-1:exon:26666;Parent=Msa0573220-mRNA-1 |
| chr4_1 | five_prime_UTR | 76314664 | 76314795 | 76314664 | ID=Msa0573220-mRNA-1:five_prime_utr;Parent=Msa0573220-mRNA-1 |
| chr4_1 | five_prime_UTR | 76314541 | 76314554 | 76314541 | ID=Msa0573220-mRNA-1:five_prime_utr;Parent=Msa0573220-mRNA-1 |
| chr4_1 | CDS | 76314502 | 76314540 | 76314502 | ID=Msa0573220-mRNA-1:cds;Parent=Msa0573220-mRNA-1 |
| chr4_1 | CDS | 76314182 | 76314274 | 76314182 | ID=Msa0573220-mRNA-1:cds;Parent=Msa0573220-mRNA-1 |
| chr4_1 | CDS | 76313969 | 76314028 | 76313969 | ID=Msa0573220-mRNA-1:cds;Parent=Msa0573220-mRNA-1 |
| chr4_1 | CDS | 76311664 | 76311711 | 76311664 | ID=Msa0573220-mRNA-1:cds;Parent=Msa0573220-mRNA-1 |
| chr4_1 | CDS | 76311505 | 76311579 | 76311505 | ID=Msa0573220-mRNA-1:cds;Parent=Msa0573220-mRNA-1 |
| chr4_1 | CDS | 76311337 | 76311403 | 76311337 | ID=Msa0573220-mRNA-1:cds;Parent=Msa0573220-mRNA-1 |
| chr4_1 | CDS | 76310066 | 76310147 | 76310066 | ID=Msa0573220-mRNA-1:cds;Parent=Msa0573220-mRNA-1 |
| chr4_1 | CDS | 76309775 | 76309893 | 76309775 | ID=Msa0573220-mRNA-1:cds;Parent=Msa0573220-mRNA-1 |
| chr4_1 | CDS | 76309665 | 76309688 | 76309665 | ID=Msa0573220-mRNA-1:cds;Parent=Msa0573220-mRNA-1 |
| chr4_1 | CDS | 76309275 | 76309369 | 76309275 | ID=Msa0573220-mRNA-1:cds;Parent=Msa0573220-mRNA-1 |
| chr4_1 | CDS | 76309140 | 76309199 | 76309140 | ID=Msa0573220-mRNA-1:cds;Parent=Msa0573220-mRNA-1 |
| chr4_1 | CDS | 76308984 | 76309038 | 76308984 | ID=Msa0573220-mRNA-1:cds;Parent=Msa0573220-mRNA-1 |
| chr4_1 | CDS | 76308428 | 76308552 | 76308428 | ID=Msa0573220-mRNA-1:cds;Parent=Msa0573220-mRNA-1 |
| chr4_1 | three_prime_UTR | 76308075 | 76308427 | 76308075 | ID=Msa0573220-mRNA-1:three_prime_utr;Parent=Msa0573220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
