AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1400560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 25 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAGCCATATTTCAGTTTA+TGG 0.073373 tig0022460:+86360 Msa1400560:CDS
GTGCTTTGAACGTCCATAAA+AGG 0.285913 tig0022460:+86180 Msa1400560:CDS
GTGCTTTGAACGTCCATAAA+AGG 0.292733 tig0022460:+88313 Msa1400560:CDS
CTATACCATAAACTGAAATA+TGG 0.300254 tig0022460:-86365 None:intergenic
ATATACTATAAACTGAAATA+TGG 0.301575 tig0022460:-88498 None:intergenic
TGTTCTCCAGTATATCTTCT+TGG 0.311912 tig0022460:-86340 None:intergenic
TGTTCTCCAGTATATCTTCT+TGG 0.311912 tig0022460:-88473 None:intergenic
AATTCTCCAAGAAGATATAC+TGG 0.369151 tig0022460:+86334 Msa1400560:CDS
AATTCTCCAAGAAGATATAC+TGG 0.369151 tig0022460:+88467 Msa1400560:CDS
TCCCAAGTCCTTCGAAAGTA+AGG 0.396127 tig0022460:+86157 Msa1400560:CDS
TCCCAAGTCCTTCGAAAGTA+GGG 0.449688 tig0022460:+88290 Msa1400560:intron
GTGGTTGACATGTCTTCATA+TGG 0.455172 tig0022460:-86274 None:intergenic
GTGGTTGACATGTCTTCATA+TGG 0.455172 tig0022460:-88407 None:intergenic
ACCCTTACTTTCGAAGGACT+TGG 0.470340 tig0022460:-86159 None:intergenic
CCCTTACTTTCGAAGGACTT+GGG 0.477508 tig0022460:-86158 None:intergenic
CAAAGCACCCTTACTTTCGA+AGG 0.524991 tig0022460:-86165 None:intergenic
GTCCCAAGTCCTTCGAAAGT+AGG 0.556450 tig0022460:+88289 Msa1400560:intron
TTATGTACTTGCGGCTTCTG+TGG 0.572456 tig0022460:-86293 None:intergenic
TTATGTACTTGCGGCTTCTG+TGG 0.572456 tig0022460:-88426 None:intergenic
CAAAGCACCCCTACTTTCGA+AGG 0.573103 tig0022460:-88298 None:intergenic
CCCAAGTCCTTCGAAAGTAA+GGG 0.608380 tig0022460:+86158 Msa1400560:CDS
CCCAAGTCCTTCGAAAGTAG+GGG 0.658544 tig0022460:+88291 Msa1400560:intron
TGGGACAATCAAAGCAAGCG+TGG 0.684170 tig0022460:-86139 None:intergenic
AAAACACGTTGCGATAGATG+TGG 0.685090 tig0022460:+86218 Msa1400560:CDS
AAAACACGTTGCGATAGATG+TGG 0.685090 tig0022460:+88351 Msa1400560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATTTAATAA+GGG - tig0022460:87749-87768 None:intergenic 0.0%
!! ATATATATATATATTTAATA+AGG - tig0022460:87748-87767 None:intergenic 0.0%
!! TATATATATATATTTAATAA+GGG - tig0022460:87749-87768 None:intergenic 0.0%
!! ATATATATATATATTTAATA+AGG - tig0022460:87748-87767 None:intergenic 0.0%
!!! TTAATTTTAGTTAAATTTCT+TGG + tig0022460:86517-86536 Msa1400560:intron 10.0%
!! ATAAAATTATAAACTCAAAA+TGG + tig0022460:86834-86853 Msa1400560:intron 10.0%
!!! TTTCTATTTAGAATATTTTT+AGG + tig0022460:87014-87033 Msa1400560:intron 10.0%
!! TTATGTATAAAAAAAAATGA+GGG + tig0022460:87107-87126 Msa1400560:intron 10.0%
!! AATTCTATTAAATCATATTT+AGG + tig0022460:87818-87837 Msa1400560:intron 10.0%
!! ATTCTATTAAATCATATTTA+GGG + tig0022460:87819-87838 Msa1400560:intron 10.0%
!!! TTAATTTTAGTTAAATTTCT+TGG + tig0022460:86517-86536 Msa1400560:intron 10.0%
!! ATAAAATTATAAACTCAAAA+TGG + tig0022460:86834-86853 Msa1400560:intron 10.0%
!!! TTTCTATTTAGAATATTTTT+AGG + tig0022460:87014-87033 Msa1400560:intron 10.0%
!! TTATGTATAAAAAAAAATGA+GGG + tig0022460:87107-87126 Msa1400560:intron 10.0%
!! AATTCTATTAAATCATATTT+AGG + tig0022460:87818-87837 Msa1400560:intron 10.0%
!! ATTCTATTAAATCATATTTA+GGG + tig0022460:87819-87838 Msa1400560:intron 10.0%
!!! ATGAGTATTTTTTTTCAAAA+GGG - tig0022460:86947-86966 None:intergenic 15.0%
!!! TATGAGTATTTTTTTTCAAA+AGG - tig0022460:86948-86967 None:intergenic 15.0%
!!! TCTTTATTTATTTTCAATTG+AGG + tig0022460:87043-87062 Msa1400560:intron 15.0%
!!! CTTTATTTATTTTCAATTGA+GGG + tig0022460:87044-87063 Msa1400560:intron 15.0%
!! GTTATGTATAAAAAAAAATG+AGG + tig0022460:87106-87125 Msa1400560:intron 15.0%
!! ATATACTATAAACTGAAATA+TGG - tig0022460:88501-88520 None:intergenic 15.0%
!!! ATGAGTATTTTTTTTCAAAA+GGG - tig0022460:86947-86966 None:intergenic 15.0%
!!! TATGAGTATTTTTTTTCAAA+AGG - tig0022460:86948-86967 None:intergenic 15.0%
!!! TCTTTATTTATTTTCAATTG+AGG + tig0022460:87043-87062 Msa1400560:intron 15.0%
!!! CTTTATTTATTTTCAATTGA+GGG + tig0022460:87044-87063 Msa1400560:intron 15.0%
!! GTTATGTATAAAAAAAAATG+AGG + tig0022460:87106-87125 Msa1400560:intron 15.0%
!! ATATACTATAAACTGAAATA+TGG - tig0022460:88501-88520 None:intergenic 15.0%
!!! TTTTAATTATGTATGAGAGT+AGG + tig0022460:86559-86578 Msa1400560:intron 20.0%
!! TGTGAATAATAAACTACAAA+AGG - tig0022460:86661-86680 None:intergenic 20.0%
!!! TATATGTGATGCTAAATTTT+AGG - tig0022460:87677-87696 None:intergenic 20.0%
!!! TTTTAATTATGTATGAGAGT+AGG + tig0022460:86559-86578 Msa1400560:intron 20.0%
!! TGTGAATAATAAACTACAAA+AGG - tig0022460:86661-86680 None:intergenic 20.0%
!!! TATATGTGATGCTAAATTTT+AGG - tig0022460:87677-87696 None:intergenic 20.0%
! AGAATTCTTCAAATTCATTG+AGG - tig0022460:86320-86339 None:intergenic 25.0%
! CTATACCATAAACTGAAATA+TGG - tig0022460:86368-86387 None:intergenic 25.0%
! CATATTTCAGTTTATGGTAT+AGG + tig0022460:86366-86385 Msa1400560:intron 25.0%
!! TTTGTCGACTATATATTCTT+AGG + tig0022460:86436-86455 Msa1400560:intron 25.0%
! TACTATAATTCTTGCATGTA+TGG + tig0022460:86473-86492 Msa1400560:intron 25.0%
! AGGATGAAATATTCTATTAC+AGG + tig0022460:86579-86598 Msa1400560:intron 25.0%
! AACATAATTAAAAGCTTACG+AGG + tig0022460:86762-86781 Msa1400560:intron 25.0%
! GCAACAAAAACTATGAAATA+AGG + tig0022460:88061-88080 Msa1400560:intron 25.0%
! TTATTCAACAGTATATCCAT+GGG - tig0022460:88123-88142 None:intergenic 25.0%
! ATTATTCAACAGTATATCCA+TGG - tig0022460:88124-88143 None:intergenic 25.0%
! AGAATTCTTCAAATTCATTG+AGG - tig0022460:86320-86339 None:intergenic 25.0%
! AGAATTCTTCAAATTCATTG+AGG - tig0022460:86320-86339 None:intergenic 25.0%
! CTATACCATAAACTGAAATA+TGG - tig0022460:86368-86387 None:intergenic 25.0%
! CATATTTCAGTTTATGGTAT+AGG + tig0022460:86366-86385 Msa1400560:intron 25.0%
!! TTTGTCGACTATATATTCTT+AGG + tig0022460:86436-86455 Msa1400560:intron 25.0%
! TACTATAATTCTTGCATGTA+TGG + tig0022460:86473-86492 Msa1400560:intron 25.0%
! AGGATGAAATATTCTATTAC+AGG + tig0022460:86579-86598 Msa1400560:intron 25.0%
! AACATAATTAAAAGCTTACG+AGG + tig0022460:86762-86781 Msa1400560:intron 25.0%
! GCAACAAAAACTATGAAATA+AGG + tig0022460:88061-88080 Msa1400560:intron 25.0%
! TTATTCAACAGTATATCCAT+GGG - tig0022460:88123-88142 None:intergenic 25.0%
! ATTATTCAACAGTATATCCA+TGG - tig0022460:88124-88143 None:intergenic 25.0%
! AGAATTCTTCAAATTCATTG+AGG - tig0022460:86320-86339 None:intergenic 25.0%
! CTTCACATTCAAACCTTTTA+TGG - tig0022460:86196-86215 None:intergenic 30.0%
AATTCTCCAAGAAGATATAC+TGG + tig0022460:86334-86353 Msa1400560:CDS 30.0%
ACAAGCCATATTTCAGTTTA+TGG + tig0022460:86360-86379 Msa1400560:CDS 30.0%
TAGTTTATTATTCACAGCTC+CGG + tig0022460:86665-86684 Msa1400560:intron 30.0%
!!! TTTTGATGTCATTTTGCTCT+TGG - tig0022460:87224-87243 None:intergenic 30.0%
ATTGACAACATATTAGGGTA+GGG - tig0022460:87272-87291 None:intergenic 30.0%
AATTGACAACATATTAGGGT+AGG - tig0022460:87273-87292 None:intergenic 30.0%
GAGCAATTGACAACATATTA+GGG - tig0022460:87277-87296 None:intergenic 30.0%
TGAGCAATTGACAACATATT+AGG - tig0022460:87278-87297 None:intergenic 30.0%
! AAATTAGTTGACTCTTGAAC+TGG - tig0022460:87578-87597 None:intergenic 30.0%
AATTCCATTGTCTACTTGTA+GGG + tig0022460:87607-87626 Msa1400560:intron 30.0%
!!! AGCTAAGTTTTGGGTTTAAA+TGG - tig0022460:87636-87655 None:intergenic 30.0%
!! TGTGATGCTAAATTTTAGGT+GGG - tig0022460:87673-87692 None:intergenic 30.0%
! ATGTGATGCTAAATTTTAGG+TGG - tig0022460:87674-87693 None:intergenic 30.0%
!! TAAATTTTGTTGTGAACCCA+TGG + tig0022460:88104-88123 Msa1400560:intron 30.0%
! CTTCACATTCAAACCTTTTA+TGG - tig0022460:86196-86215 None:intergenic 30.0%
AATTCTCCAAGAAGATATAC+TGG + tig0022460:86334-86353 Msa1400560:CDS 30.0%
! CTTCACATTCAAACCTTTTA+TGG - tig0022460:86196-86215 None:intergenic 30.0%
AATTCTCCAAGAAGATATAC+TGG + tig0022460:86334-86353 Msa1400560:CDS 30.0%
ACAAGCCATATTTCAGTTTA+TGG + tig0022460:86360-86379 Msa1400560:CDS 30.0%
TAGTTTATTATTCACAGCTC+CGG + tig0022460:86665-86684 Msa1400560:intron 30.0%
!!! TTTTGATGTCATTTTGCTCT+TGG - tig0022460:87224-87243 None:intergenic 30.0%
ATTGACAACATATTAGGGTA+GGG - tig0022460:87272-87291 None:intergenic 30.0%
AATTGACAACATATTAGGGT+AGG - tig0022460:87273-87292 None:intergenic 30.0%
GAGCAATTGACAACATATTA+GGG - tig0022460:87277-87296 None:intergenic 30.0%
TGAGCAATTGACAACATATT+AGG - tig0022460:87278-87297 None:intergenic 30.0%
! AAATTAGTTGACTCTTGAAC+TGG - tig0022460:87578-87597 None:intergenic 30.0%
AATTCCATTGTCTACTTGTA+GGG + tig0022460:87607-87626 Msa1400560:intron 30.0%
!!! AGCTAAGTTTTGGGTTTAAA+TGG - tig0022460:87636-87655 None:intergenic 30.0%
!! TGTGATGCTAAATTTTAGGT+GGG - tig0022460:87673-87692 None:intergenic 30.0%
! ATGTGATGCTAAATTTTAGG+TGG - tig0022460:87674-87693 None:intergenic 30.0%
!! TAAATTTTGTTGTGAACCCA+TGG + tig0022460:88104-88123 Msa1400560:intron 30.0%
! CTTCACATTCAAACCTTTTA+TGG - tig0022460:86196-86215 None:intergenic 30.0%
AATTCTCCAAGAAGATATAC+TGG + tig0022460:86334-86353 Msa1400560:CDS 30.0%
CATTGAGGATTATGTACTTG+CGG - tig0022460:86305-86324 None:intergenic 35.0%
TGTTCTCCAGTATATCTTCT+TGG - tig0022460:86343-86362 None:intergenic 35.0%
CTACAAGTAGACAATGGAAT+TGG - tig0022460:87608-87627 None:intergenic 35.0%
CAATTCCATTGTCTACTTGT+AGG + tig0022460:87606-87625 Msa1400560:intron 35.0%
! TCCATACAGAGCTAAGTTTT+GGG - tig0022460:87645-87664 None:intergenic 35.0%
AAATAGTGCATTAGAGTGTG+AGG - tig0022460:88185-88204 None:intergenic 35.0%
CATTGAGGATTATGTACTTG+CGG - tig0022460:86305-86324 None:intergenic 35.0%
TGTTCTCCAGTATATCTTCT+TGG - tig0022460:86343-86362 None:intergenic 35.0%
CATTGAGGATTATGTACTTG+CGG - tig0022460:86305-86324 None:intergenic 35.0%
TGTTCTCCAGTATATCTTCT+TGG - tig0022460:86343-86362 None:intergenic 35.0%
CTACAAGTAGACAATGGAAT+TGG - tig0022460:87608-87627 None:intergenic 35.0%
CAATTCCATTGTCTACTTGT+AGG + tig0022460:87606-87625 Msa1400560:intron 35.0%
! TCCATACAGAGCTAAGTTTT+GGG - tig0022460:87645-87664 None:intergenic 35.0%
AAATAGTGCATTAGAGTGTG+AGG - tig0022460:88185-88204 None:intergenic 35.0%
CATTGAGGATTATGTACTTG+CGG - tig0022460:86305-86324 None:intergenic 35.0%
TGTTCTCCAGTATATCTTCT+TGG - tig0022460:86343-86362 None:intergenic 35.0%
! GTGCTTTGAACGTCCATAAA+AGG + tig0022460:86180-86199 Msa1400560:CDS 40.0%
AAAACACGTTGCGATAGATG+TGG + tig0022460:86218-86237 Msa1400560:CDS 40.0%
GTGGTTGACATGTCTTCATA+TGG - tig0022460:86277-86296 None:intergenic 40.0%
GAAGCATGAACGAACTTCAT+AGG + tig0022460:86735-86754 Msa1400560:intron 40.0%
GAAAACCATTGAGTCTGCTA+GGG - tig0022460:86805-86824 None:intergenic 40.0%
TGAAAACCATTGAGTCTGCT+AGG - tig0022460:86806-86825 None:intergenic 40.0%
AGAATAGTGTCCAACTACGT+TGG + tig0022460:87244-87263 Msa1400560:intron 40.0%
GAATAGTGTCCAACTACGTT+GGG + tig0022460:87245-87264 Msa1400560:intron 40.0%
!! ACCCAAAACTTAGCTCTGTA+TGG + tig0022460:87641-87660 Msa1400560:intron 40.0%
! GTCCATACAGAGCTAAGTTT+TGG - tig0022460:87646-87665 None:intergenic 40.0%
GAACATCGTGGATGATTCTT+AGG - tig0022460:88253-88272 None:intergenic 40.0%
! GTGCTTTGAACGTCCATAAA+AGG + tig0022460:86180-86199 Msa1400560:CDS 40.0%
AAAACACGTTGCGATAGATG+TGG + tig0022460:86218-86237 Msa1400560:CDS 40.0%
GTGGTTGACATGTCTTCATA+TGG - tig0022460:86277-86296 None:intergenic 40.0%
! GTGCTTTGAACGTCCATAAA+AGG + tig0022460:86180-86199 Msa1400560:CDS 40.0%
AAAACACGTTGCGATAGATG+TGG + tig0022460:86218-86237 Msa1400560:CDS 40.0%
GTGGTTGACATGTCTTCATA+TGG - tig0022460:86277-86296 None:intergenic 40.0%
GAAGCATGAACGAACTTCAT+AGG + tig0022460:86735-86754 Msa1400560:intron 40.0%
GAAAACCATTGAGTCTGCTA+GGG - tig0022460:86805-86824 None:intergenic 40.0%
TGAAAACCATTGAGTCTGCT+AGG - tig0022460:86806-86825 None:intergenic 40.0%
AGAATAGTGTCCAACTACGT+TGG + tig0022460:87244-87263 Msa1400560:intron 40.0%
GAATAGTGTCCAACTACGTT+GGG + tig0022460:87245-87264 Msa1400560:intron 40.0%
!! ACCCAAAACTTAGCTCTGTA+TGG + tig0022460:87641-87660 Msa1400560:intron 40.0%
! GTCCATACAGAGCTAAGTTT+TGG - tig0022460:87646-87665 None:intergenic 40.0%
GAACATCGTGGATGATTCTT+AGG - tig0022460:88253-88272 None:intergenic 40.0%
! GTGCTTTGAACGTCCATAAA+AGG + tig0022460:86180-86199 Msa1400560:CDS 40.0%
AAAACACGTTGCGATAGATG+TGG + tig0022460:86218-86237 Msa1400560:CDS 40.0%
GTGGTTGACATGTCTTCATA+TGG - tig0022460:86277-86296 None:intergenic 40.0%
TCCCAAGTCCTTCGAAAGTA+AGG + tig0022460:86157-86176 Msa1400560:CDS 45.0%
CCCTTACTTTCGAAGGACTT+GGG - tig0022460:86161-86180 None:intergenic 45.0%
CCCAAGTCCTTCGAAAGTAA+GGG + tig0022460:86158-86177 Msa1400560:CDS 45.0%
ACCCTTACTTTCGAAGGACT+TGG - tig0022460:86162-86181 None:intergenic 45.0%
! CAAAGCACCCTTACTTTCGA+AGG - tig0022460:86168-86187 None:intergenic 45.0%
TTATGTACTTGCGGCTTCTG+TGG - tig0022460:86296-86315 None:intergenic 45.0%
CCGAATACATCACACATGAC+CGG - tig0022460:86687-86706 None:intergenic 45.0%
CCGGTCATGTGTGATGTATT+CGG + tig0022460:86684-86703 Msa1400560:intron 45.0%
ACAAACCCTAGCAGACTCAA+TGG + tig0022460:86797-86816 Msa1400560:intron 45.0%
GAGACCCTACAAGTAGACAA+TGG - tig0022460:87614-87633 None:intergenic 45.0%
AGTGCATTAGAGTGTGAGGT+AGG - tig0022460:88181-88200 None:intergenic 45.0%
TCCCAAGTCCTTCGAAAGTA+GGG + tig0022460:86157-86176 Msa1400560:CDS 45.0%
TTATGTACTTGCGGCTTCTG+TGG - tig0022460:86296-86315 None:intergenic 45.0%
TCCCAAGTCCTTCGAAAGTA+AGG + tig0022460:86157-86176 Msa1400560:CDS 45.0%
CCCTTACTTTCGAAGGACTT+GGG - tig0022460:86161-86180 None:intergenic 45.0%
CCCAAGTCCTTCGAAAGTAA+GGG + tig0022460:86158-86177 Msa1400560:CDS 45.0%
ACCCTTACTTTCGAAGGACT+TGG - tig0022460:86162-86181 None:intergenic 45.0%
! CAAAGCACCCTTACTTTCGA+AGG - tig0022460:86168-86187 None:intergenic 45.0%
TTATGTACTTGCGGCTTCTG+TGG - tig0022460:86296-86315 None:intergenic 45.0%
CCGAATACATCACACATGAC+CGG - tig0022460:86687-86706 None:intergenic 45.0%
CCGGTCATGTGTGATGTATT+CGG + tig0022460:86684-86703 Msa1400560:intron 45.0%
ACAAACCCTAGCAGACTCAA+TGG + tig0022460:86797-86816 Msa1400560:intron 45.0%
GAGACCCTACAAGTAGACAA+TGG - tig0022460:87614-87633 None:intergenic 45.0%
AGTGCATTAGAGTGTGAGGT+AGG - tig0022460:88181-88200 None:intergenic 45.0%
TCCCAAGTCCTTCGAAAGTA+GGG + tig0022460:86157-86176 Msa1400560:CDS 45.0%
TTATGTACTTGCGGCTTCTG+TGG - tig0022460:86296-86315 None:intergenic 45.0%
!!! TTATTAATTGAATATTTTAT+TGG + tig0022460:86866-86885 Msa1400560:intron 5.0%
!!! ATTTATTTATTTTTATTTGA+AGG + tig0022460:87397-87416 Msa1400560:intron 5.0%
!!! TTATTAATTGAATATTTTAT+TGG + tig0022460:86866-86885 Msa1400560:intron 5.0%
!!! ATTTATTTATTTTTATTTGA+AGG + tig0022460:87397-87416 Msa1400560:intron 5.0%
TGGGACAATCAAAGCAAGCG+TGG - tig0022460:86142-86161 None:intergenic 50.0%
AAAGCAAGCGTGGAACATCG+TGG - tig0022460:88265-88284 None:intergenic 50.0%
TGGGACAATCAAAGCAAGCG+TGG - tig0022460:86142-86161 None:intergenic 50.0%
GTCCCAAGTCCTTCGAAAGT+AGG + tig0022460:86156-86175 Msa1400560:CDS 50.0%
CCCCTACTTTCGAAGGACTT+GGG - tig0022460:88294-88313 None:intergenic 50.0%
CCCAAGTCCTTCGAAAGTAG+GGG + tig0022460:88291-88310 Msa1400560:intron 50.0%
ACCCCTACTTTCGAAGGACT+TGG - tig0022460:88295-88314 None:intergenic 50.0%
! CAAAGCACCCCTACTTTCGA+AGG - tig0022460:88301-88320 None:intergenic 50.0%
TGGGACAATCAAAGCAAGCG+TGG - tig0022460:86142-86161 None:intergenic 50.0%
AAAGCAAGCGTGGAACATCG+TGG - tig0022460:88265-88284 None:intergenic 50.0%
TGGGACAATCAAAGCAAGCG+TGG - tig0022460:86142-86161 None:intergenic 50.0%
GTCCCAAGTCCTTCGAAAGT+AGG + tig0022460:86156-86175 Msa1400560:CDS 50.0%
CCCCTACTTTCGAAGGACTT+GGG - tig0022460:88294-88313 None:intergenic 50.0%
CCCAAGTCCTTCGAAAGTAG+GGG + tig0022460:88291-88310 Msa1400560:intron 50.0%
ACCCCTACTTTCGAAGGACT+TGG - tig0022460:88295-88314 None:intergenic 50.0%
! CAAAGCACCCCTACTTTCGA+AGG - tig0022460:88301-88320 None:intergenic 50.0%
GGGTAGGGTCCCAACGTAGT+TGG - tig0022460:87257-87276 None:intergenic 60.0%
GGGTAGGGTCCCAACGTAGT+TGG - tig0022460:87257-87276 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0022460 gene 86134 88568 86134 ID=Msa1400560;Name=Msa1400560
tig0022460 mRNA 86134 88568 86134 ID=Msa1400560-mRNA-1;Parent=Msa1400560;Name=Msa1400560-mRNA-1;_AED=0.40;_eAED=0.57;_QI=0|0|0|1|0|0|4|0|155
tig0022460 exon 86134 86307 86134 ID=Msa1400560-mRNA-1:exon:17744;Parent=Msa1400560-mRNA-1
tig0022460 exon 86334 86381 86334 ID=Msa1400560-mRNA-1:exon:17745;Parent=Msa1400560-mRNA-1
tig0022460 exon 88297 88440 88297 ID=Msa1400560-mRNA-1:exon:17746;Parent=Msa1400560-mRNA-1
tig0022460 exon 88467 88568 88467 ID=Msa1400560-mRNA-1:exon:17747;Parent=Msa1400560-mRNA-1
tig0022460 CDS 86134 86307 86134 ID=Msa1400560-mRNA-1:cds;Parent=Msa1400560-mRNA-1
tig0022460 CDS 86334 86381 86334 ID=Msa1400560-mRNA-1:cds;Parent=Msa1400560-mRNA-1
tig0022460 CDS 88297 88440 88297 ID=Msa1400560-mRNA-1:cds;Parent=Msa1400560-mRNA-1
tig0022460 CDS 88467 88568 88467 ID=Msa1400560-mRNA-1:cds;Parent=Msa1400560-mRNA-1
Gene Sequence

>Msa1400560

ATGTTCCACGCTTGCTTTGATTGTCCCAAGTCCTTCGAAAGTAAGGGTGCTTTGAACGTCCATAAAAGGTTTGAATGTGAAGCTAAAACACGTTGCGATAGATGTGGTAAATTATGCTCATCTATTCTTTCTTGTTCTAACCATATGAAGACATGTCAACCACAGAAGCCGCAAAATTCTCCAAGAAGATATACTGGAGAACAAGCCATATTTCAGTTTATGTCCTTCGAAAGTAGGGGTGCTTTGAACGTCCATAAAAGGTTTGAATGTGAAGCTAAAACACGTTGCGATAGATGTGGTAAATTATGCTCATCTATTCTTTCTTGTTCTAACCATATGAAGACATGTCAACCACAGAAGCCGCAAAATTCTCCAAGAAGATATACTGGAGAACAAGCCATATTTCAGTTTATAGTATATGATTTAATCTTATTTCTATCAGTTTTTTATATTCTCTATAAGATTTAG
Protein sequence

>Msa1400560

MFHACFDCPKSFESKGALNVHKRFECEAKTRCDRCGKLCSSILSCSNHMKTCQPQKPQNSPRRYTGEQAIFQFMSFESRGALNVHKRFECEAKTRCDRCGKLCSSILSCSNHMKTCQPQKPQNSPRRYTGEQAIFQFIVYDLILFLSVFYILYKI*