Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401740 | XP_013455885.1 | 94.089 | 609 | 29 | 2 | 88 | 696 | 37 | 638 | 0.0 | 1157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401740 | sp|Q9FYC7|PDAT2_ARATH | 61.353 | 621 | 219 | 8 | 79 | 696 | 63 | 665 | 0.0 | 739 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401740 | A0A072UKK7 | 94.089 | 609 | 29 | 2 | 88 | 696 | 37 | 638 | 0.0 | 1157 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0642420 | Msa1401740 | 0.830237 | 3.288783e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401740 | MtrunA17_Chr4g0027511 | 94.089 | 609 | 29 | 2 | 88 | 696 | 37 | 638 | 0.0 | 1157 |
| Msa1401740 | MtrunA17_Chr8g0343491 | 53.722 | 618 | 264 | 9 | 80 | 696 | 81 | 677 | 0.0 | 656 |
| Msa1401740 | MtrunA17_Chr6g0462921 | 38.462 | 78 | 33 | 1 | 253 | 330 | 63 | 125 | 5.02e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401740 | AT3G44830.1 | 61.353 | 621 | 219 | 8 | 79 | 696 | 63 | 665 | 0.0 | 739 |
| Msa1401740 | AT5G13640.1 | 55.276 | 597 | 247 | 7 | 102 | 696 | 93 | 671 | 0.0 | 644 |
| Msa1401740 | AT5G13640.3 | 53.676 | 544 | 232 | 7 | 155 | 696 | 2 | 527 | 0.0 | 555 |
| Msa1401740 | AT5G13640.2 | 53.471 | 533 | 228 | 7 | 166 | 696 | 1 | 515 | 0.0 | 539 |
Find 164 sgRNAs with CRISPR-Local
Find 433 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTACCATGCATTCAATTT+TGG | 0.069123 | tig0022726:-25528 | Msa1401740:CDS |
| ATTTCCTCCATTTCCTAAAA+TGG | 0.106647 | tig0022726:-22103 | Msa1401740:CDS |
| CATCCTGTTGTTCTTGTTCC+TGG | 0.118959 | tig0022726:-24159 | Msa1401740:CDS |
| GTCAGCCTTAATAGAAAATT+TGG | 0.145337 | tig0022726:-22633 | Msa1401740:CDS |
| AGCGCGTGCCAACAACATTT+TGG | 0.150771 | tig0022726:-19668 | Msa1401740:CDS |
| CATTAGATGAATTATTAATT+TGG | 0.156986 | tig0022726:+19905 | None:intergenic |
| AATATATTGCTAACTGCTTT+TGG | 0.195787 | tig0022726:+21981 | None:intergenic |
| TTGCTTCTGGTTATCATATT+TGG | 0.201664 | tig0022726:-22655 | Msa1401740:CDS |
| TCGGCACGCTTCATCATATT+TGG | 0.205885 | tig0022726:+20258 | None:intergenic |
| TTTATTCCTCCATACTTTAT+AGG | 0.218413 | tig0022726:+20759 | None:intergenic |
| TATTTGTAATGTGCATATTT+AGG | 0.225116 | tig0022726:+20195 | None:intergenic |
| TGCAACTCAATTACAAATTA+CGG | 0.273856 | tig0022726:-25582 | Msa1401740:CDS |
| TGGGATTGTGACTGCTGGTT+TGG | 0.285942 | tig0022726:-24139 | Msa1401740:CDS |
| ATCAACACACCTCGGTGTTT+TGG | 0.287518 | tig0022726:+22549 | None:intergenic |
| GGTAGTTGTACCTCAATCTA+TGG | 0.305168 | tig0022726:-22135 | Msa1401740:CDS |
| CAGATGGTTTCACCGCCTTT+TGG | 0.312872 | tig0022726:+20912 | None:intergenic |
| ATCTTCACATGATAAGTTAA+AGG | 0.318525 | tig0022726:+20386 | None:intergenic |
| TATGGAGGAATAAACTCTTT+TGG | 0.332720 | tig0022726:-20750 | Msa1401740:CDS |
| CAAAAGGCGGTGAAACCATC+TGG | 0.335571 | tig0022726:-20911 | Msa1401740:CDS |
| ATAGAAAATTTGGCAAGAAT+TGG | 0.340569 | tig0022726:-22623 | Msa1401740:CDS |
| GACTGCTGGTTTGGAACTTT+GGG | 0.344887 | tig0022726:-24130 | Msa1401740:CDS |
| GCAACTCAATTACAAATTAC+GGG | 0.347974 | tig0022726:-25581 | Msa1401740:CDS |
| CGTTTGAATGTTGTAAGTTC+AGG | 0.349898 | tig0022726:-19829 | Msa1401740:CDS |
| TGACTGCTGGTTTGGAACTT+TGG | 0.354188 | tig0022726:-24131 | Msa1401740:CDS |
| GTTAAAGAACCTATAAAGTA+TGG | 0.355231 | tig0022726:-20768 | Msa1401740:CDS |
| TGTTCTTCTGCGCCATCCTT+TGG | 0.358239 | tig0022726:+19795 | None:intergenic |
| TCACATTTACTCCATTCATT+AGG | 0.363288 | tig0022726:+20870 | None:intergenic |
| ATCCTGTTGTTCTTGTTCCT+GGG | 0.366281 | tig0022726:-24158 | Msa1401740:CDS |
| CATCTGGGGCGACTTGGATT+CGG | 0.366339 | tig0022726:-20895 | Msa1401740:CDS |
| CTCAGATATCCTCATGATAT+CGG | 0.383781 | tig0022726:+19564 | None:intergenic |
| TGGGGCTATTGCTTCTTCCT+TGG | 0.384332 | tig0022726:-25508 | Msa1401740:CDS |
| ACTGCCCTGACTCGAATTCC+TGG | 0.391992 | tig0022726:+22704 | None:intergenic |
| AGAACACGGTTCAATCCTTC+TGG | 0.401173 | tig0022726:-19778 | Msa1401740:CDS |
| AATATGCACATTACAAATAC+TGG | 0.402272 | tig0022726:-20191 | Msa1401740:CDS |
| TTTCCTCCATTTCCTAAAAT+GGG | 0.407748 | tig0022726:-22102 | Msa1401740:CDS |
| ACCCACCAGGAATTCGAGTC+AGG | 0.412402 | tig0022726:-22709 | Msa1401740:CDS |
| ACTTATCATGTGAAGATGTT+CGG | 0.415777 | tig0022726:-20380 | Msa1401740:CDS |
| GTTCCTGGGATTGTGACTGC+TGG | 0.421055 | tig0022726:-24144 | Msa1401740:CDS |
| GAAAGACAGCCTCCAGTCAT+AGG | 0.421225 | tig0022726:+22571 | None:intergenic |
| AACACTTCCCAAAATGTTGT+TGG | 0.421853 | tig0022726:+19660 | None:intergenic |
| AATATCAGCCCGGCATTTCT+CGG | 0.423297 | tig0022726:-22008 | Msa1401740:CDS |
| GGAGCCACCGGTGTAACTAT+TGG | 0.425537 | tig0022726:-19604 | Msa1401740:CDS |
| CCTCCCATGGGTGGTGGTGG+TGG | 0.427685 | tig0022726:-22068 | Msa1401740:CDS |
| GTGGAAATATACTGTCTATA+TGG | 0.428784 | tig0022726:-20000 | Msa1401740:CDS |
| ATTTCCACATTCGGAGCATC+GGG | 0.435477 | tig0022726:+20015 | None:intergenic |
| ATCTGGGGCGACTTGGATTC+GGG | 0.438140 | tig0022726:-20894 | Msa1401740:CDS |
| TAATTCATCTAATGTAGAAA+AGG | 0.443681 | tig0022726:-19896 | Msa1401740:CDS |
| GACTGTTTAGGAAGAGATTG+TGG | 0.446238 | tig0022726:-24086 | Msa1401740:CDS |
| AGACAGTATATTTCCACATT+CGG | 0.451615 | tig0022726:+20006 | None:intergenic |
| ATCCCAGGAACAAGAACAAC+AGG | 0.452659 | tig0022726:+24156 | None:intergenic |
| GTAAATGTGATCAGGTAAAG+AGG | 0.455853 | tig0022726:-20857 | Msa1401740:CDS |
| GCAGTGATGCTGCATTTGTC+AGG | 0.458112 | tig0022726:-21947 | Msa1401740:intron |
| AATGATGTTTCTTTAGTTGA+CGG | 0.461598 | tig0022726:-19859 | Msa1401740:CDS |
| GAGCTTATGTATATAACAAA+TGG | 0.466054 | tig0022726:-22170 | Msa1401740:CDS |
| CATACTTACTTTGTTTCAAG+TGG | 0.470722 | tig0022726:+20162 | None:intergenic |
| AATTCATCTAATGTAGAAAA+GGG | 0.470961 | tig0022726:-19895 | Msa1401740:CDS |
| CCGCCTCCCATGGGTGGTGG+TGG | 0.475149 | tig0022726:-22071 | Msa1401740:CDS |
| TTTGGAACACCGAGAAATGC+CGG | 0.476050 | tig0022726:+21999 | None:intergenic |
| AGATGCTCTAACCAGCATAA+AGG | 0.479607 | tig0022726:+22758 | None:intergenic |
| GTTTGAATGTTGTAAGTTCA+GGG | 0.480165 | tig0022726:-19828 | Msa1401740:CDS |
| AGATGTTCGGACTGAATGTA+AGG | 0.480772 | tig0022726:-20367 | Msa1401740:CDS |
| GCCGAGGCTCATTTCTCTCA+CGG | 0.483809 | tig0022726:-20240 | Msa1401740:CDS |
| GTAGTTGTACCTCAATCTAT+GGG | 0.483976 | tig0022726:-22134 | Msa1401740:CDS |
| CGAGTTGCTTCTGGAGCCAC+CGG | 0.486148 | tig0022726:-19616 | Msa1401740:CDS |
| TATTTCCACATTCGGAGCAT+CGG | 0.489737 | tig0022726:+20014 | None:intergenic |
| TCTGCATAATGAGACTGGTC+TGG | 0.492498 | tig0022726:-22732 | Msa1401740:CDS |
| GTGGTGGTGGTGGTCCAGGT+TGG | 0.492891 | tig0022726:-22058 | Msa1401740:CDS |
| GGTTGAGACACCGCCTCCCA+TGG | 0.494478 | tig0022726:-22081 | Msa1401740:CDS |
| TCGTCGGCAGCAACAAGCTC+GGG | 0.495087 | tig0022726:+22680 | None:intergenic |
| TCAAAACCAGTTAATGTAGC+TGG | 0.495233 | tig0022726:+24234 | None:intergenic |
| CTCTCTCTGCATAATGAGAC+TGG | 0.497112 | tig0022726:-22737 | Msa1401740:CDS |
| TGAAACCATCTGGGGCGACT+TGG | 0.498231 | tig0022726:-20901 | Msa1401740:CDS |
| TGATTACCTTGGTCTTCAAA+CGG | 0.498650 | tig0022726:-20988 | Msa1401740:CDS |
| GAAGGGAGACCTTGTGCTGA+TGG | 0.498883 | tig0022726:-24108 | Msa1401740:CDS |
| TGAATGGAGTAAATGTGATC+AGG | 0.500127 | tig0022726:-20865 | Msa1401740:CDS |
| TTTAGTGATGTGAATTGGAA+AGG | 0.501988 | tig0022726:-25557 | Msa1401740:CDS |
| CTGGTTTGGAACTTTGGGAA+GGG | 0.504699 | tig0022726:-24125 | Msa1401740:CDS |
| TGGATTCGGGTCCTAATGAA+TGG | 0.505642 | tig0022726:-20881 | Msa1401740:CDS |
| TGGTTGATTCACCTGGTTTG+AGG | 0.506730 | tig0022726:-24209 | Msa1401740:CDS |
| GATGAATTATTAATTTGGAA+AGG | 0.508185 | tig0022726:+19910 | None:intergenic |
| ATCATCTCATTGATGCCAAA+AGG | 0.509480 | tig0022726:-20927 | Msa1401740:CDS |
| TTGTAGCAGCTGCGAGGGAA+TGG | 0.511841 | tig0022726:+25435 | None:intergenic |
| CTCGAACGTTGCTAAAAGAA+AGG | 0.515641 | tig0022726:-20325 | Msa1401740:CDS |
| CTTGTGCTGATGGACTGTTT+AGG | 0.518343 | tig0022726:-24098 | Msa1401740:CDS |
| TCTTGCGAGTATGTAGAACT+TGG | 0.518457 | tig0022726:-20956 | Msa1401740:CDS |
| ATCGTCGGCAGCAACAAGCT+CGG | 0.520423 | tig0022726:+22679 | None:intergenic |
| TGCACATGGCTTCCTATGAC+TGG | 0.520435 | tig0022726:-22583 | Msa1401740:CDS |
| GTACGAGGTAGTGTTCTTGA+AGG | 0.522599 | tig0022726:-19709 | Msa1401740:CDS |
| TTGGAACACCGAGAAATGCC+GGG | 0.523951 | tig0022726:+22000 | None:intergenic |
| TGGCAATTAGGCCTTTATGC+TGG | 0.530788 | tig0022726:-22769 | Msa1401740:intron |
| TTAGTGATGTGAATTGGAAA+GGG | 0.531177 | tig0022726:-25556 | Msa1401740:CDS |
| GCTAAAAGAAAGGCTAGTAC+AGG | 0.532518 | tig0022726:-20315 | Msa1401740:CDS |
| CCCTGACTCGAATTCCTGGT+GGG | 0.533011 | tig0022726:+22708 | None:intergenic |
| AAAAGGCGGTGAAACCATCT+GGG | 0.535354 | tig0022726:-20910 | Msa1401740:CDS |
| ATTTAAAATGCCAGAAGTCA+CGG | 0.545132 | tig0022726:+21013 | None:intergenic |
| AACAAATGGCTATAAGAAAG+TGG | 0.545400 | tig0022726:-22156 | Msa1401740:CDS |
| TAAATGTGATCAGGTAAAGA+GGG | 0.546659 | tig0022726:-20856 | Msa1401740:CDS |
| TAGCCCCAAAATTGAATGCA+TGG | 0.553243 | tig0022726:+25523 | None:intergenic |
| TGGCAAGAATTGGTTACGAA+GGG | 0.553618 | tig0022726:-22613 | Msa1401740:CDS |
| CCCGTGAGAGAAATGAGCCT+CGG | 0.554013 | tig0022726:+20239 | None:intergenic |
| ACTACCCGATGCTCCGAATG+TGG | 0.557273 | tig0022726:-20019 | Msa1401740:CDS |
| TTTGAAGTGGTTGATTCACC+TGG | 0.558776 | tig0022726:-24216 | Msa1401740:CDS |
| GCTGGTTTGGAACTTTGGGA+AGG | 0.558892 | tig0022726:-24126 | Msa1401740:CDS |
| TGTACATGTGATCTTTCAGT+CGG | 0.558938 | tig0022726:+19967 | None:intergenic |
| CAGTGCGAAGACGAAGGTCG+TGG | 0.564268 | tig0022726:-25925 | Msa1401740:CDS |
| TTGGCAAGAATTGGTTACGA+AGG | 0.564599 | tig0022726:-22614 | Msa1401740:CDS |
| ACACCGCCTCCCATGGGTGG+TGG | 0.565944 | tig0022726:-22074 | Msa1401740:CDS |
| GTTGAGACACCGCCTCCCAT+GGG | 0.567506 | tig0022726:-22080 | Msa1401740:CDS |
| TCAGGGTTCATGTGTGCCAA+AGG | 0.568884 | tig0022726:-19811 | Msa1401740:CDS |
| GGTTCATGTGTGCCAAAGGA+TGG | 0.568993 | tig0022726:-19807 | Msa1401740:CDS |
| AGCAATCATGAATATCAGCC+CGG | 0.569294 | tig0022726:-22018 | Msa1401740:CDS |
| CTTGCGAGTATGTAGAACTT+GGG | 0.569603 | tig0022726:-20955 | Msa1401740:CDS |
| CCGAGGCTCATTTCTCTCAC+GGG | 0.569904 | tig0022726:-20239 | Msa1401740:CDS |
| CCACCACCACCCATGGGAGG+CGG | 0.570935 | tig0022726:+22071 | None:intergenic |
| CGAATCCAAGTCGCCCCAGA+TGG | 0.574839 | tig0022726:+20896 | None:intergenic |
| AAACCAGCAGTCACAATCCC+AGG | 0.575877 | tig0022726:+24141 | None:intergenic |
| ACTTTATAGGTTCTTTAACG+TGG | 0.580240 | tig0022726:+20772 | None:intergenic |
| GAAGTTTGTAGCAGCTGCGA+GGG | 0.580816 | tig0022726:+25430 | None:intergenic |
| CGAAGCAAGTAACTGCGAAA+CGG | 0.582127 | tig0022726:+20722 | None:intergenic |
| TAATTTGTAATTGAGTTGCA+AGG | 0.583647 | tig0022726:+25585 | None:intergenic |
| GAGACACCGCCTCCCATGGG+TGG | 0.586020 | tig0022726:-22077 | Msa1401740:CDS |
| GCCCTGACTCGAATTCCTGG+TGG | 0.593334 | tig0022726:+22707 | None:intergenic |
| GCCACCGGTGTAACTATTGG+AGG | 0.593714 | tig0022726:-19601 | Msa1401740:CDS |
| ACTGTTTAGGAAGAGATTGT+GGG | 0.602326 | tig0022726:-24085 | Msa1401740:CDS |
| ACGGTTCAATCCTTCTGGCA+TGG | 0.602461 | tig0022726:-19773 | Msa1401740:CDS |
| GAATGTAAGGGGATATGCAG+AGG | 0.607370 | tig0022726:-20354 | Msa1401740:CDS |
| ATATGCTTGTACTTGTCAGA+AGG | 0.609031 | tig0022726:+19934 | None:intergenic |
| TACACTTGATTCAGAAGCAG+AGG | 0.610882 | tig0022726:-20691 | Msa1401740:intron |
| ATGTTCGGACTGAATGTAAG+GGG | 0.614515 | tig0022726:-20365 | Msa1401740:CDS |
| CCACCACCACCACCCATGGG+AGG | 0.614770 | tig0022726:+22068 | None:intergenic |
| GATGTTCGGACTGAATGTAA+GGG | 0.615781 | tig0022726:-20366 | Msa1401740:CDS |
| TAGTTGTACCTCAATCTATG+GGG | 0.617016 | tig0022726:-22133 | Msa1401740:CDS |
| TACGAGGTAGTGTTCTTGAA+GGG | 0.622527 | tig0022726:-19708 | Msa1401740:CDS |
| ACATGGCTTCCTATGACTGG+AGG | 0.623723 | tig0022726:-22580 | Msa1401740:CDS |
| CTAAACAGTCCATCAGCACA+AGG | 0.624539 | tig0022726:+24099 | None:intergenic |
| ATCGCCTCCAATAGTTACAC+CGG | 0.625759 | tig0022726:+19597 | None:intergenic |
| CGAAGGGAAGAACTTGCACA+TGG | 0.629333 | tig0022726:-22597 | Msa1401740:CDS |
| GAGACTGGTCTGGACCCACC+AGG | 0.631009 | tig0022726:-22722 | Msa1401740:CDS |
| AAAGAACCTATAAAGTATGG+AGG | 0.632909 | tig0022726:-20765 | Msa1401740:CDS |
| ATATATGTAGCCATGCCAGA+AGG | 0.632985 | tig0022726:+19763 | None:intergenic |
| CCCACCAGGAATTCGAGTCA+GGG | 0.636571 | tig0022726:-22708 | Msa1401740:CDS |
| ATCTCATTGATGCCAAAAGG+CGG | 0.643250 | tig0022726:-20924 | Msa1401740:CDS |
| ATGGTACTCTACCTCTGTAG+AGG | 0.643743 | tig0022726:+25454 | None:intergenic |
| GAAAACAAAGACCACGGTGA+TGG | 0.646317 | tig0022726:-25896 | Msa1401740:CDS |
| GAAGGGAGAAGTCTAGAGAG+CGG | 0.649585 | tig0022726:-19691 | Msa1401740:CDS |
| TGCGAAGACGAAGGTCGTGG+TGG | 0.652005 | tig0022726:-25922 | Msa1401740:CDS |
| TGAAGTTTGTAGCAGCTGCG+AGG | 0.653068 | tig0022726:+25429 | None:intergenic |
| TGTATCTTGTTCCTCTACAG+AGG | 0.660396 | tig0022726:-25465 | Msa1401740:CDS |
| GTGTAACTATTGGAGGCGAT+AGG | 0.665057 | tig0022726:-19594 | Msa1401740:CDS |
| GTTCAACCGTTTGAAGACCA+AGG | 0.665578 | tig0022726:+20982 | None:intergenic |
| GCCTCCAATAGTTACACCGG+TGG | 0.669222 | tig0022726:+19600 | None:intergenic |
| AAGGATGGCGCAGAAGAACA+CGG | 0.670355 | tig0022726:-19792 | Msa1401740:CDS |
| ATAACCAGAAGCAAAATCGT+CGG | 0.671502 | tig0022726:+22664 | None:intergenic |
| AAATGTGATCAGGTAAAGAG+GGG | 0.673154 | tig0022726:-20855 | Msa1401740:CDS |
| CTGTTTAGGAAGAGATTGTG+GGG | 0.674054 | tig0022726:-24084 | Msa1401740:CDS |
| AGTTGTACCTCAATCTATGG+GGG | 0.677192 | tig0022726:-22132 | Msa1401740:CDS |
| AAATATGATGAAGCGTGCCG+AGG | 0.680600 | tig0022726:-20256 | Msa1401740:CDS |
| AGTAACAACACTTATAACTG+CGG | 0.702274 | tig0022726:-20813 | Msa1401740:CDS |
| AAACAACGAGGTAGTGTACG+AGG | 0.712095 | tig0022726:-19724 | Msa1401740:CDS |
| ATATCATGAGGATATCTGAG+AGG | 0.718835 | tig0022726:-19561 | Msa1401740:CDS |
| AAAGGCGGTGAAACCATCTG+GGG | 0.727551 | tig0022726:-20909 | Msa1401740:CDS |
| TGGTGCGAAAACAAAGACCA+CGG | 0.734384 | tig0022726:-25902 | Msa1401740:CDS |
| TACAAGGCACTCCATCACCG+TGG | 0.774481 | tig0022726:+25885 | None:intergenic |
| GCTGTCTTTCCAAAACACCG+AGG | 0.805594 | tig0022726:-22558 | Msa1401740:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATTATAAGTTTAATGT+AGG | - | tig0022726:21977-21996 | Msa1401740:CDS | 10.0% |
| !! | AAAATAAGTTTCAATTAATT+TGG | - | tig0022726:23226-23245 | Msa1401740:intron | 10.0% |
| !!! | TGATTTTATCAAATTATTAT+CGG | - | tig0022726:24134-24153 | Msa1401740:CDS | 10.0% |
| !!! | TTATTTTTCGTACAAAATTT+TGG | - | tig0022726:19837-19856 | Msa1401740:CDS | 15.0% |
| !!! | TATTTTTCGTACAAAATTTT+GGG | - | tig0022726:19838-19857 | Msa1401740:CDS | 15.0% |
| !! | TTGATGAAATTCAATAAATA+AGG | - | tig0022726:20304-20323 | Msa1401740:CDS | 15.0% |
| !! | CAATAAATAAGGTATAATAA+TGG | - | tig0022726:20315-20334 | Msa1401740:CDS | 15.0% |
| !! | AAAATCCAAATTGATAAAAA+AGG | - | tig0022726:20476-20495 | Msa1401740:intron | 15.0% |
| !! | AAATCCAAATTGATAAAAAA+GGG | - | tig0022726:20477-20496 | Msa1401740:intron | 15.0% |
| !!! | TTTTTTTTTCTTCTACAAAA+AGG | - | tig0022726:20595-20614 | Msa1401740:intron | 15.0% |
| !!! | GTAATGGAAAAAATAAAAAT+AGG | + | tig0022726:20655-20674 | None:intergenic | 15.0% |
| !! | AAAAAAGAAAAACTCATTAT+TGG | + | tig0022726:22674-22693 | None:intergenic | 15.0% |
| !! | TAACTGATAAGAAAAATAAA+AGG | + | tig0022726:23138-23157 | None:intergenic | 15.0% |
| !! | TGTTTAACTATGAAAATATA+GGG | - | tig0022726:24388-24407 | Msa1401740:intron | 15.0% |
| !!! | ATTTTAAATTTTGATTACCT+TGG | - | tig0022726:24478-24497 | Msa1401740:intron | 15.0% |
| !! | CATTAGATGAATTATTAATT+TGG | + | tig0022726:25575-25594 | None:intergenic | 15.0% |
| !!! | ATTATTTGTGTTGATTTCAA+TGG | - | tig0022726:20221-20240 | Msa1401740:CDS | 20.0% |
| !! | AAAAATAATAAATGCTGCAT+TGG | - | tig0022726:20340-20359 | Msa1401740:CDS | 20.0% |
| !! | AATCCAAATTGATAAAAAAG+GGG | - | tig0022726:20478-20497 | Msa1401740:intron | 20.0% |
| !! | CGGTGAAATATTATTAAAAA+TGG | - | tig0022726:21104-21123 | Msa1401740:intron | 20.0% |
| !!! | GAAATCTAGAATGATATAAT+GGG | + | tig0022726:22331-22350 | None:intergenic | 20.0% |
| !!! | TGAAATCTAGAATGATATAA+TGG | + | tig0022726:22332-22351 | None:intergenic | 20.0% |
| !!! | ATCAATTTTTGCATCTTAAT+TGG | - | tig0022726:22539-22558 | Msa1401740:intron | 20.0% |
| !!! | TTCTTTTTTCTTTTTTTGTG+TGG | - | tig0022726:22685-22704 | Msa1401740:CDS | 20.0% |
| !! | TAAAAATAACTGAACAATGA+CGG | + | tig0022726:23004-23023 | None:intergenic | 20.0% |
| !! | TAAGAAAAATAAAAGGAAAG+CGG | + | tig0022726:23131-23150 | None:intergenic | 20.0% |
| !! | AAGAAGTCAAATTGAAATAA+AGG | + | tig0022726:23575-23594 | None:intergenic | 20.0% |
| !! | ATAAGAAGAAAAACTGAATA+AGG | - | tig0022726:24009-24028 | Msa1401740:intron | 20.0% |
| !! | AGATAATATGAAAGTAAAAC+TGG | - | tig0022726:24250-24269 | Msa1401740:intron | 20.0% |
| !! | CTGTTTAACTATGAAAATAT+AGG | - | tig0022726:24387-24406 | Msa1401740:intron | 20.0% |
| !! | ATAATTAACGTAGTATATGA+TGG | - | tig0022726:24418-24437 | Msa1401740:intron | 20.0% |
| !! | GAAAAACAAATAGTATCATA+TGG | + | tig0022726:24814-24833 | None:intergenic | 20.0% |
| !! | TATTTGTAATGTGCATATTT+AGG | + | tig0022726:25285-25304 | None:intergenic | 20.0% |
| !!! | GATGAATTATTAATTTGGAA+AGG | + | tig0022726:25570-25589 | None:intergenic | 20.0% |
| !! | TAATTCATCTAATGTAGAAA+AGG | - | tig0022726:25581-25600 | Msa1401740:CDS | 20.0% |
| !! | AATTCATCTAATGTAGAAAA+GGG | - | tig0022726:25582-25601 | Msa1401740:CDS | 20.0% |
| ! | CAAAATTATTGTAGAAGTTG+CGG | - | tig0022726:19620-19639 | Msa1401740:CDS | 25.0% |
| ! | AAATTTGAAAAAACTCGAGA+AGG | - | tig0022726:19796-19815 | Msa1401740:CDS | 25.0% |
| ! | AATTTGAAAAAACTCGAGAA+GGG | - | tig0022726:19797-19816 | Msa1401740:CDS | 25.0% |
| !! | TAATTTGTAATTGAGTTGCA+AGG | + | tig0022726:19895-19914 | None:intergenic | 25.0% |
| ! | TGCAACTCAATTACAAATTA+CGG | - | tig0022726:19895-19914 | Msa1401740:CDS | 25.0% |
| !! | ATTACCATGCATTCAATTTT+GGG | - | tig0022726:19950-19969 | Msa1401740:CDS | 25.0% |
| ! | TTGAAAAGAAAGAAACATGT+GGG | + | tig0022726:20141-20160 | None:intergenic | 25.0% |
| ! | TTTGAAAAGAAAGAAACATG+TGG | + | tig0022726:20142-20161 | None:intergenic | 25.0% |
| ! | TAACGACTATAATTTAGAGA+CGG | + | tig0022726:20173-20192 | None:intergenic | 25.0% |
| ! | TCTCTAAATTATAGTCGTTA+AGG | - | tig0022726:20173-20192 | Msa1401740:CDS | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | tig0022726:20273-20292 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | tig0022726:20274-20293 | None:intergenic | 25.0% |
| !!! | TTTCCCCTTTTTTATCAATT+TGG | + | tig0022726:20484-20503 | None:intergenic | 25.0% |
| !!! | CAAGTTGAAGATTTTTAATC+CGG | + | tig0022726:20550-20569 | None:intergenic | 25.0% |
| ! | CTTCTACAAAAAGGTAAAAT+AGG | - | tig0022726:20604-20623 | Msa1401740:intron | 25.0% |
| ! | TAGGTAGGTAGAAAAAAATA+TGG | + | tig0022726:20753-20772 | None:intergenic | 25.0% |
| ! | GCTGCTAAATAAATATTTGT+TGG | + | tig0022726:21053-21072 | None:intergenic | 25.0% |
| ! | ATAGTACTATGTTATGTTGT+CGG | - | tig0022726:21084-21103 | Msa1401740:intron | 25.0% |
| ! | GTTACTCATTCTCAATATAA+AGG | - | tig0022726:21451-21470 | Msa1401740:intron | 25.0% |
| ! | AGTTTATAGCATAGTTCATA+TGG | - | tig0022726:21531-21550 | Msa1401740:intron | 25.0% |
| !!! | ATGTTCTTGAAATTTTGACA+TGG | - | tig0022726:21731-21750 | Msa1401740:intron | 25.0% |
| !!! | TGTAATTGTTTGATTTGTCT+AGG | - | tig0022726:21803-21822 | Msa1401740:intron | 25.0% |
| !! | AACAGAAACTGAGAATTTTT+AGG | - | tig0022726:22017-22036 | Msa1401740:CDS | 25.0% |
| !!! | AGAATTTTTAGGTAGGTATT+AGG | - | tig0022726:22028-22047 | Msa1401740:CDS | 25.0% |
| ! | GTGGTTAATTATATCTTATG+CGG | - | tig0022726:22123-22142 | Msa1401740:CDS | 25.0% |
| ! | AGTACTAACTGTTAACAAAA+GGG | + | tig0022726:22195-22214 | None:intergenic | 25.0% |
| ! | CATGCATATTATGTTAAACT+TGG | - | tig0022726:22360-22379 | Msa1401740:intron | 25.0% |
| !! | AATAACAGAAGCTTTATCTT+TGG | + | tig0022726:22620-22639 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTTTTTTGTGTGG+TGG | - | tig0022726:22688-22707 | Msa1401740:CDS | 25.0% |
| !! | TCTTGCCAAATTTTCTATTA+AGG | + | tig0022726:22852-22871 | None:intergenic | 25.0% |
| ! | ATAGAAAATTTGGCAAGAAT+TGG | - | tig0022726:22854-22873 | Msa1401740:intron | 25.0% |
| ! | AAGAAAAATAAAAGGAAAGC+GGG | + | tig0022726:23130-23149 | None:intergenic | 25.0% |
| !!! | TTTTGGCTATATAAGCATAA+AGG | + | tig0022726:23168-23187 | None:intergenic | 25.0% |
| ! | GAGCTTATGTATATAACAAA+TGG | - | tig0022726:23307-23326 | Msa1401740:intron | 25.0% |
| !! | AATATATTGCTAACTGCTTT+TGG | + | tig0022726:23499-23518 | None:intergenic | 25.0% |
| !! | CGAAATTTGAAGGTATAATT+TGG | - | tig0022726:23599-23618 | Msa1401740:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | tig0022726:23661-23680 | None:intergenic | 25.0% |
| !! | AATAATCTGAAATCTACCTA+TGG | - | tig0022726:23804-23823 | Msa1401740:intron | 25.0% |
| ! | ATGCCATCATTAATAATCTA+AGG | - | tig0022726:23921-23940 | Msa1401740:intron | 25.0% |
| ! | TGCCATCATTAATAATCTAA+GGG | - | tig0022726:23922-23941 | Msa1401740:intron | 25.0% |
| !! | TTCAGTTTTTCTTCTTATCA+TGG | + | tig0022726:24007-24026 | None:intergenic | 25.0% |
| ! | TATCAAATTATTATCGGTGT+CGG | - | tig0022726:24140-24159 | Msa1401740:CDS | 25.0% |
| ! | CATAGAAACGTATAAATAGA+TGG | + | tig0022726:24338-24357 | None:intergenic | 25.0% |
| ! | ATACGTTTCTATGAATCAAA+AGG | - | tig0022726:24345-24364 | Msa1401740:intron | 25.0% |
| !! | TTTTCATAGTTAAACAGTCT+AGG | + | tig0022726:24384-24403 | None:intergenic | 25.0% |
| ! | GTTAAAGAACCTATAAAGTA+TGG | - | tig0022726:24709-24728 | Msa1401740:intron | 25.0% |
| ! | TTTATTCCTCCATACTTTAT+AGG | + | tig0022726:24721-24740 | None:intergenic | 25.0% |
| ! | TTGAACTATACTGATCAAAT+CGG | + | tig0022726:24973-24992 | None:intergenic | 25.0% |
| ! | ATCTTCACATGATAAGTTAA+AGG | + | tig0022726:25094-25113 | None:intergenic | 25.0% |
| ! | AATATGCACATTACAAATAC+TGG | - | tig0022726:25286-25305 | Msa1401740:intron | 25.0% |
| ! | TCAAACTAATGAGTCAAATA+GGG | + | tig0022726:25412-25431 | None:intergenic | 25.0% |
| ! | TTCAAACTAATGAGTCAAAT+AGG | + | tig0022726:25413-25432 | None:intergenic | 25.0% |
| ! | AATGATGTTTCTTTAGTTGA+CGG | - | tig0022726:25618-25637 | Msa1401740:intron | 25.0% |
| ! | CAATAATTTTGTCGCATACA+AGG | + | tig0022726:19611-19630 | None:intergenic | 30.0% |
| TTATCGCATTGTTACATGTA+GGG | + | tig0022726:19700-19719 | None:intergenic | 30.0% | |
| TTTATCGCATTGTTACATGT+AGG | + | tig0022726:19701-19720 | None:intergenic | 30.0% | |
| GCAACTCAATTACAAATTAC+GGG | - | tig0022726:19896-19915 | Msa1401740:CDS | 30.0% | |
| TTTAGTGATGTGAATTGGAA+AGG | - | tig0022726:19920-19939 | Msa1401740:CDS | 30.0% | |
| TTAGTGATGTGAATTGGAAA+GGG | - | tig0022726:19921-19940 | Msa1401740:CDS | 30.0% | |
| ! | GATTACCATGCATTCAATTT+TGG | - | tig0022726:19949-19968 | Msa1401740:CDS | 30.0% |
| ! | TTACCATGCATTCAATTTTG+GGG | - | tig0022726:19951-19970 | Msa1401740:CDS | 30.0% |
| !! | AGATACATTGTTTTGCTTCT+TGG | + | tig0022726:19999-20018 | None:intergenic | 30.0% |
| TGAAAAGAAAGAAACATGTG+GGG | + | tig0022726:20140-20159 | None:intergenic | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | - | tig0022726:20270-20289 | Msa1401740:CDS | 30.0% | |
| ! | TAATTTGCATTTAAACACCC+TGG | - | tig0022726:20439-20458 | Msa1401740:intron | 30.0% |
| TTTATAATCTGAACGAACCA+GGG | + | tig0022726:20459-20478 | None:intergenic | 30.0% | |
| ! | TTTTATAATCTGAACGAACC+AGG | + | tig0022726:20460-20479 | None:intergenic | 30.0% |
| !! | CCTAACTTTTCTAGAAGAAT+AGG | + | tig0022726:20511-20530 | None:intergenic | 30.0% |
| ! | CCTATTCTTCTAGAAAAGTT+AGG | - | tig0022726:20508-20527 | Msa1401740:intron | 30.0% |
| ! | ATTCTTCTAGAAAAGTTAGG+CGG | - | tig0022726:20511-20530 | Msa1401740:intron | 30.0% |
| CGGATTAAAAATCTTCAACT+TGG | - | tig0022726:20548-20567 | Msa1401740:intron | 30.0% | |
| CATCAAAACAAGGTCAAATA+GGG | - | tig0022726:20572-20591 | Msa1401740:intron | 30.0% | |
| TACATGAGATCATGTATTGT+AGG | + | tig0022726:20772-20791 | None:intergenic | 30.0% | |
| ! | TTTCAGTTTTTGCAATTGCT+CGG | - | tig0022726:20799-20818 | Msa1401740:CDS | 30.0% |
| CATCAAACAAAAACACACTT+TGG | - | tig0022726:21002-21021 | Msa1401740:CDS | 30.0% | |
| AAAGAAGCAAAGTAAAGTGA+AGG | - | tig0022726:21131-21150 | Msa1401740:intron | 30.0% | |
| TTGGTTATGTGTGTACAATT+TGG | - | tig0022726:21190-21209 | Msa1401740:intron | 30.0% | |
| !!! | TACATTAACTGGTTTTGAAG+TGG | - | tig0022726:21248-21267 | Msa1401740:intron | 30.0% |
| GTTTGAGGATGAAAAATGAA+GGG | - | tig0022726:21283-21302 | Msa1401740:intron | 30.0% | |
| TTTGAGGATGAAAAATGAAG+GGG | - | tig0022726:21284-21303 | Msa1401740:intron | 30.0% | |
| TTGGAGAATTTGAGAAAAAG+TGG | + | tig0022726:21421-21440 | None:intergenic | 30.0% | |
| ! | CTTTTTCTCAAATTCTCCAA+AGG | - | tig0022726:21421-21440 | Msa1401740:intron | 30.0% |
| ! | TACTTTGTAGTTTGTACCAT+AGG | - | tig0022726:21480-21499 | Msa1401740:intron | 30.0% |
| CATAACACAATTTAGACCTA+TGG | + | tig0022726:21499-21518 | None:intergenic | 30.0% | |
| !! | CATATGGTAGTTCTAAATTG+AGG | - | tig0022726:21547-21566 | Msa1401740:intron | 30.0% |
| ! | GATTTTAGATGTCTCTACAA+CGG | - | tig0022726:21593-21612 | Msa1401740:intron | 30.0% |
| !! | AAATTTTGACATGGCTATTG+AGG | - | tig0022726:21740-21759 | Msa1401740:intron | 30.0% |
| ! | CTATTGAGGAAATTTGTTTG+AGG | - | tig0022726:21754-21773 | Msa1401740:intron | 30.0% |
| GCTAGTAAGTAAAATACTCA+TGG | + | tig0022726:21954-21973 | None:intergenic | 30.0% | |
| !!! | GAAACTGAGAATTTTTAGGT+AGG | - | tig0022726:22021-22040 | Msa1401740:CDS | 30.0% |
| GTATTAGGTAATGTTAACCA+AGG | - | tig0022726:22043-22062 | Msa1401740:CDS | 30.0% | |
| CAGTACTAACTGTTAACAAA+AGG | + | tig0022726:22196-22215 | None:intergenic | 30.0% | |
| GGTAGATGAAAGGAAATTTA+AGG | - | tig0022726:22242-22261 | Msa1401740:intron | 30.0% | |
| AGATGAAAGGAAATTTAAGG+AGG | - | tig0022726:22245-22264 | Msa1401740:intron | 30.0% | |
| AGATGGATCAAACTATTACA+TGG | + | tig0022726:22424-22443 | None:intergenic | 30.0% | |
| AATAGTTTGATCCATCTAGA+CGG | - | tig0022726:22427-22446 | Msa1401740:intron | 30.0% | |
| TTGTAGAAGAGAAAAACTTG+TGG | - | tig0022726:22485-22504 | Msa1401740:intron | 30.0% | |
| ! | TTGCTTCTGGTTATCATATT+TGG | - | tig0022726:22822-22841 | Msa1401740:intron | 30.0% |
| GTCAGCCTTAATAGAAAATT+TGG | - | tig0022726:22844-22863 | Msa1401740:intron | 30.0% | |
| ! | TTTCTGCTTCATAACGTTTT+TGG | + | tig0022726:23185-23204 | None:intergenic | 30.0% |
| ! | TTTTCAATCTACTAAGAGCT+TGG | + | tig0022726:23279-23298 | None:intergenic | 30.0% |
| AACAAATGGCTATAAGAAAG+TGG | - | tig0022726:23321-23340 | Msa1401740:intron | 30.0% | |
| ATTTCCTCCATTTCCTAAAA+TGG | - | tig0022726:23374-23393 | Msa1401740:intron | 30.0% | |
| TTTCCTCCATTTCCTAAAAT+GGG | - | tig0022726:23375-23394 | Msa1401740:intron | 30.0% | |
| ! | AGCAATATATTTTCAGCTGA+AGG | - | tig0022726:23508-23527 | Msa1401740:intron | 30.0% |
| ! | AAATAAAGGATTGTGTTGCT+AGG | + | tig0022726:23561-23580 | None:intergenic | 30.0% |
| TTATAGCATAAGTGCTTATG+TGG | - | tig0022726:23688-23707 | Msa1401740:intron | 30.0% | |
| TCAACCAAACCAATCTAAAT+AGG | - | tig0022726:23892-23911 | Msa1401740:intron | 30.0% | |
| ATTATTAATGATGGCATCCA+AGG | + | tig0022726:23918-23937 | None:intergenic | 30.0% | |
| GCCATCATTAATAATCTAAG+GGG | - | tig0022726:23923-23942 | Msa1401740:intron | 30.0% | |
| TCCCCTTAGATTATTAATGA+TGG | + | tig0022726:23927-23946 | None:intergenic | 30.0% | |
| GAACTTCAGGAAAATATTGA+AGG | - | tig0022726:23957-23976 | Msa1401740:intron | 30.0% | |
| AGGTATCATCAATGTTAAGT+TGG | - | tig0022726:23977-23996 | Msa1401740:intron | 30.0% | |
| ! | ATTTAAAATGCCAGAAGTCA+CGG | + | tig0022726:24467-24486 | None:intergenic | 30.0% |
| TCACATTTACTCCATTCATT+AGG | + | tig0022726:24610-24629 | None:intergenic | 30.0% | |
| TAAATGTGATCAGGTAAAGA+GGG | - | tig0022726:24621-24640 | Msa1401740:intron | 30.0% | |
| AGTAACAACACTTATAACTG+CGG | - | tig0022726:24664-24683 | Msa1401740:intron | 30.0% | |
| ACTTTATAGGTTCTTTAACG+TGG | + | tig0022726:24708-24727 | None:intergenic | 30.0% | |
| AAAGAACCTATAAAGTATGG+AGG | - | tig0022726:24712-24731 | Msa1401740:intron | 30.0% | |
| ! | TATGGAGGAATAAACTCTTT+TGG | - | tig0022726:24727-24746 | Msa1401740:intron | 30.0% |
| TCCTGCACAAAAGAAATATA+CGG | + | tig0022726:25045-25064 | None:intergenic | 30.0% | |
| ACTTATCATGTGAAGATGTT+CGG | - | tig0022726:25097-25116 | Msa1401740:intron | 30.0% | |
| ! | CATACTTACTTTGTTTCAAG+TGG | + | tig0022726:25318-25337 | None:intergenic | 30.0% |
| AGTCAAATAGGGTAATCAAA+TGG | + | tig0022726:25401-25420 | None:intergenic | 30.0% | |
| AGACAGTATATTTCCACATT+CGG | + | tig0022726:25474-25493 | None:intergenic | 30.0% | |
| GTGGAAATATACTGTCTATA+TGG | - | tig0022726:25477-25496 | Msa1401740:CDS | 30.0% | |
| GTTTGAATGTTGTAAGTTCA+GGG | - | tig0022726:25649-25668 | Msa1401740:intron | 30.0% | |
| TATAAGTTGTGTACACATGC+AGG | + | tig0022726:19646-19665 | None:intergenic | 35.0% | |
| TATCGCATTGTTACATGTAG+GGG | + | tig0022726:19699-19718 | None:intergenic | 35.0% | |
| !! | ATTTTGGGTGTTGTGTTATC+AGG | - | tig0022726:19853-19872 | Msa1401740:CDS | 35.0% |
| ! | TTTTGCTTCTTGGATTTCCA+AGG | + | tig0022726:19989-20008 | None:intergenic | 35.0% |
| GACTATAATTTAGAGACGGA+GGG | + | tig0022726:20169-20188 | None:intergenic | 35.0% | |
| ! | GTTGAAGATTTTTAATCCGG+CGG | + | tig0022726:20547-20566 | None:intergenic | 35.0% |
| !!! | CCTATTTGACCTTGTTTTGA+TGG | + | tig0022726:20574-20593 | None:intergenic | 35.0% |
| CCATCAAAACAAGGTCAAAT+AGG | - | tig0022726:20571-20590 | Msa1401740:intron | 35.0% | |
| TAAAATAGGTGTTAACTCGC+TGG | - | tig0022726:20618-20637 | Msa1401740:intron | 35.0% | |
| !! | GCATCTGGTTCTTATAGTAA+TGG | + | tig0022726:20671-20690 | None:intergenic | 35.0% |
| GTAGAAAAAAATATGGTGCG+AGG | + | tig0022726:20746-20765 | None:intergenic | 35.0% | |
| TGAGATCATGTATTGTAGGT+AGG | + | tig0022726:20768-20787 | None:intergenic | 35.0% | |
| !!! | GTTGTTTTAAGTCAGTGTAG+TGG | - | tig0022726:20829-20848 | Msa1401740:CDS | 35.0% |
| ! | TTTAAGTCAGTGTAGTGGAA+AGG | - | tig0022726:20834-20853 | Msa1401740:CDS | 35.0% |
| GTCCAAAAAGGGTTAAAGAA+AGG | - | tig0022726:20856-20875 | Msa1401740:CDS | 35.0% | |
| ! | GACCTTTCTTTAACCCTTTT+TGG | + | tig0022726:20861-20880 | None:intergenic | 35.0% |
| TTCCATTACACTATTTCACG+TGG | + | tig0022726:20886-20905 | None:intergenic | 35.0% | |
| TTGTTGGCAGAATCTATTGT+AGG | + | tig0022726:21037-21056 | None:intergenic | 35.0% | |
| !! | ACTGCATTGATTACTGTTGT+TGG | - | tig0022726:21163-21182 | Msa1401740:intron | 35.0% |
| ! | GATTACTGTTGTTGGTTGAT+TGG | - | tig0022726:21171-21190 | Msa1401740:intron | 35.0% |
| GTTATGTGTGTACAATTTGG+TGG | - | tig0022726:21193-21212 | Msa1401740:intron | 35.0% | |
| ! | TTTTTGCCAGCTACATTAAC+TGG | - | tig0022726:21237-21256 | Msa1401740:intron | 35.0% |
| TCAAAACCAGTTAATGTAGC+TGG | + | tig0022726:21246-21265 | None:intergenic | 35.0% | |
| !! | TCATTTTTCATCCTCAAACC+AGG | + | tig0022726:21282-21301 | None:intergenic | 35.0% |
| GGTTTGAGGATGAAAAATGA+AGG | - | tig0022726:21282-21301 | Msa1401740:intron | 35.0% | |
| ACTGTTTAGGAAGAGATTGT+GGG | - | tig0022726:21392-21411 | Msa1401740:intron | 35.0% | |
| ! | TGAGGAAATTTGTTTGAGGT+TGG | - | tig0022726:21758-21777 | Msa1401740:intron | 35.0% |
| ! | GAGGAAATTTGTTTGAGGTT+GGG | - | tig0022726:21759-21778 | Msa1401740:intron | 35.0% |
| GTAAAATACTCATGGTGACA+TGG | + | tig0022726:21946-21965 | None:intergenic | 35.0% | |
| GCTATAGTGATTGAAAACCT+TGG | + | tig0022726:22063-22082 | None:intergenic | 35.0% | |
| AATCACTATAGCAATTGCAG+TGG | - | tig0022726:22071-22090 | Msa1401740:CDS | 35.0% | |
| CACTATTCTCTACAACATCA+AGG | + | tig0022726:22106-22125 | None:intergenic | 35.0% | |
| CTTGATGTTGTAGAGAATAG+TGG | - | tig0022726:22104-22123 | Msa1401740:CDS | 35.0% | |
| ! | ACAGTTAGTACTGTTAGTCT+CGG | - | tig0022726:22203-22222 | Msa1401740:CDS | 35.0% |
| ! | TACTGTTAGTCTCGGTATTT+AGG | - | tig0022726:22211-22230 | Msa1401740:CDS | 35.0% |
| TGAAAGGAAATTTAAGGAGG+CGG | - | tig0022726:22248-22267 | Msa1401740:intron | 35.0% | |
| AAGGATTTGAGAGAAAGAGA+CGG | + | tig0022726:22284-22303 | None:intergenic | 35.0% | |
| CTCTCAAATCCTTGTAAATG+AGG | - | tig0022726:22291-22310 | Msa1401740:intron | 35.0% | |
| AAATCCTTGTAAATGAGGTG+AGG | - | tig0022726:22296-22315 | Msa1401740:intron | 35.0% | |
| AATCCTTGTAAATGAGGTGA+GGG | - | tig0022726:22297-22316 | Msa1401740:intron | 35.0% | |
| CCACAAATAAAATTCCCTGT+TGG | + | tig0022726:22391-22410 | None:intergenic | 35.0% | |
| !! | CCAACAGGGAATTTTATTTG+TGG | - | tig0022726:22388-22407 | Msa1401740:intron | 35.0% |
| !!! | TTTTTTGTGTGGTGGCAATT+AGG | - | tig0022726:22696-22715 | Msa1401740:CDS | 35.0% |
| ATAACCAGAAGCAAAATCGT+CGG | + | tig0022726:22816-22835 | None:intergenic | 35.0% | |
| TTAAAACGATCAACACACCT+CGG | + | tig0022726:22939-22958 | None:intergenic | 35.0% | |
| !! | ATGAAGCAGAAAAGCATTGT+TGG | - | tig0022726:23193-23212 | Msa1401740:intron | 35.0% |
| GTAGTTGTACCTCAATCTAT+GGG | - | tig0022726:23343-23362 | Msa1401740:intron | 35.0% | |
| TAGTTGTACCTCAATCTATG+GGG | - | tig0022726:23344-23363 | Msa1401740:intron | 35.0% | |
| !! | TCTCAACCCATTTTAGGAAA+TGG | + | tig0022726:23384-23403 | None:intergenic | 35.0% |
| CTTCTTCATGCGAAATTTGA+AGG | - | tig0022726:23589-23608 | Msa1401740:intron | 35.0% | |
| AAGTAGATTGTGATCCTGTT+TGG | - | tig0022726:23644-23663 | Msa1401740:intron | 35.0% | |
| ! | CAGTTATTATGCAGAGCTTT+TGG | - | tig0022726:23780-23799 | Msa1401740:intron | 35.0% |
| AAGCACTTATGTGACTGTTT+AGG | + | tig0022726:23856-23875 | None:intergenic | 35.0% | |
| ! | AAGGCCTATTTAGATTGGTT+TGG | + | tig0022726:23899-23918 | None:intergenic | 35.0% |
| AAACCAATCTAAATAGGCCT+TGG | - | tig0022726:23898-23917 | Msa1401740:intron | 35.0% | |
| ! | GGATTTTAAATGCGAACTTC+AGG | - | tig0022726:23944-23963 | Msa1401740:intron | 35.0% |
| ! | TGATTACCTTGGTCTTCAAA+CGG | - | tig0022726:24489-24508 | Msa1401740:intron | 35.0% |
| ATCATCTCATTGATGCCAAA+AGG | - | tig0022726:24550-24569 | Msa1401740:intron | 35.0% | |
| TGAATGGAGTAAATGTGATC+AGG | - | tig0022726:24612-24631 | Msa1401740:intron | 35.0% | |
| GTAAATGTGATCAGGTAAAG+AGG | - | tig0022726:24620-24639 | Msa1401740:intron | 35.0% | |
| AAATGTGATCAGGTAAAGAG+GGG | - | tig0022726:24622-24641 | Msa1401740:intron | 35.0% | |
| ! | AGGAATAAACTCTTTTGGCA+AGG | - | tig0022726:24732-24751 | Msa1401740:intron | 35.0% |
| CGTTACTGTACATGTTTACA+AGG | - | tig0022726:24853-24872 | Msa1401740:intron | 35.0% | |
| ACGGACAAAATAACAGTGAA+TGG | + | tig0022726:24926-24945 | None:intergenic | 35.0% | |
| !! | TTATTTTGTCCGTTTCTGCA+TGG | - | tig0022726:24933-24952 | Msa1401740:intron | 35.0% |
| ! | TCCGTATATTTCTTTTGTGC+AGG | - | tig0022726:25041-25060 | Msa1401740:intron | 35.0% |
| TGTACATGTGATCTTTCAGT+CGG | + | tig0022726:25513-25532 | None:intergenic | 35.0% | |
| ATATGCTTGTACTTGTCAGA+AGG | + | tig0022726:25546-25565 | None:intergenic | 35.0% | |
| CGTTTGAATGTTGTAAGTTC+AGG | - | tig0022726:25648-25667 | Msa1401740:intron | 35.0% | |
| GAGTATCAACAAAAACAACG+AGG | - | tig0022726:25741-25760 | Msa1401740:intron | 35.0% | |
| AACACTTCCCAAAATGTTGT+TGG | + | tig0022726:25820-25839 | None:intergenic | 35.0% | |
| ! | GGATATTTTCCGATATCATG+AGG | - | tig0022726:25904-25923 | Msa1401740:CDS | 35.0% |
| CTCAGATATCCTCATGATAT+CGG | + | tig0022726:25916-25935 | None:intergenic | 35.0% | |
| ATATCATGAGGATATCTGAG+AGG | - | tig0022726:25916-25935 | Msa1401740:CDS | 35.0% | |
| ! | AGTTTGCACAACTTGCTTCA+TGG | - | tig0022726:19668-19687 | Msa1401740:CDS | 40.0% |
| !! | CGGGTTTTAGTGATGTGAAT+TGG | - | tig0022726:19915-19934 | Msa1401740:CDS | 40.0% |
| TAGCCCCAAAATTGAATGCA+TGG | + | tig0022726:19957-19976 | None:intergenic | 40.0% | |
| TGTATCTTGTTCCTCTACAG+AGG | - | tig0022726:20012-20031 | Msa1401740:CDS | 40.0% | |
| TGCTACAAACTTCAGTGTGA+GGG | - | tig0022726:20057-20076 | Msa1401740:intron | 40.0% | |
| CGACTATAATTTAGAGACGG+AGG | + | tig0022726:20170-20189 | None:intergenic | 40.0% | |
| TCAACTTGGCCATCAAAACA+AGG | - | tig0022726:20562-20581 | Msa1401740:intron | 40.0% | |
| TATAAGAACCAGATGCCAGT+TGG | - | tig0022726:20675-20694 | Msa1401740:intron | 40.0% | |
| TGATTCCATATCACACCAAC+TGG | + | tig0022726:20693-20712 | None:intergenic | 40.0% | |
| ! | TGTAGTGGAAAGGTCCAAAA+AGG | - | tig0022726:20844-20863 | Msa1401740:CDS | 40.0% |
| ! | GTAGTGGAAAGGTCCAAAAA+GGG | - | tig0022726:20845-20864 | Msa1401740:CDS | 40.0% |
| CATTACACTATTTCACGTGG+AGG | + | tig0022726:20883-20902 | None:intergenic | 40.0% | |
| CTCCACGTGAAATAGTGTAA+TGG | - | tig0022726:20881-20900 | Msa1401740:CDS | 40.0% | |
| TTGGCAGAATCTATTGTAGG+TGG | + | tig0022726:21034-21053 | None:intergenic | 40.0% | |
| AGCAAAGTAAAGTGAAGGAG+TGG | - | tig0022726:21136-21155 | Msa1401740:intron | 40.0% | |
| ! | TTTGAAGTGGTTGATTCACC+TGG | - | tig0022726:21261-21280 | Msa1401740:intron | 40.0% |
| ATCCTGTTGTTCTTGTTCCT+GGG | - | tig0022726:21319-21338 | Msa1401740:intron | 40.0% | |
| GACTGTTTAGGAAGAGATTG+TGG | - | tig0022726:21391-21410 | Msa1401740:intron | 40.0% | |
| CTGTTTAGGAAGAGATTGTG+GGG | - | tig0022726:21393-21412 | Msa1401740:intron | 40.0% | |
| ATGAGTAACACACACACCTT+TGG | + | tig0022726:21440-21459 | None:intergenic | 40.0% | |
| ! | ATTTGTTTGAGGTTGGGACA+TGG | - | tig0022726:21765-21784 | Msa1401740:intron | 40.0% |
| ! | TTTGTTTGAGGTTGGGACAT+GGG | - | tig0022726:21766-21785 | Msa1401740:intron | 40.0% |
| AAGCCATGACATCAAATCCA+CGG | + | tig0022726:22166-22185 | None:intergenic | 40.0% | |
| ! | TCTCGGTATTTAGGACTGAA+AGG | - | tig0022726:22220-22239 | Msa1401740:intron | 40.0% |
| ! | CTCGGTATTTAGGACTGAAA+GGG | - | tig0022726:22221-22240 | Msa1401740:intron | 40.0% |
| AGGATTTGAGAGAAAGAGAC+GGG | + | tig0022726:22283-22302 | None:intergenic | 40.0% | |
| TATCCCTCACCTCATTTACA+AGG | + | tig0022726:22303-22322 | None:intergenic | 40.0% | |
| TTAAACTTGGCATAGCCAAC+AGG | - | tig0022726:22373-22392 | Msa1401740:intron | 40.0% | |
| TAAACTTGGCATAGCCAACA+GGG | - | tig0022726:22374-22393 | Msa1401740:intron | 40.0% | |
| AGATGCTCTAACCAGCATAA+AGG | + | tig0022726:22722-22741 | None:intergenic | 40.0% | |
| TTGGCAAGAATTGGTTACGA+AGG | - | tig0022726:22863-22882 | Msa1401740:intron | 40.0% | |
| TGGCAAGAATTGGTTACGAA+GGG | - | tig0022726:22864-22883 | Msa1401740:intron | 40.0% | |
| ACGATGCGAGAATAAAGCTT+AGG | + | tig0022726:23075-23094 | None:intergenic | 40.0% | |
| GGTAGTTGTACCTCAATCTA+TGG | - | tig0022726:23342-23361 | Msa1401740:intron | 40.0% | |
| AGTTGTACCTCAATCTATGG+GGG | - | tig0022726:23345-23364 | Msa1401740:intron | 40.0% | |
| TAAATAGCCCCCATAGATTG+AGG | + | tig0022726:23355-23374 | None:intergenic | 40.0% | |
| !! | CAACCCATTTTAGGAAATGG+AGG | + | tig0022726:23381-23400 | None:intergenic | 40.0% |
| ! | ATATGCTTTTCACACCAACC+TGG | + | tig0022726:23436-23455 | None:intergenic | 40.0% |
| AGCAATCATGAATATCAGCC+CGG | - | tig0022726:23459-23478 | Msa1401740:intron | 40.0% | |
| ! | TGACTGTTTAGGAGAGGTTT+TGG | + | tig0022726:23845-23864 | None:intergenic | 40.0% |
| CTTATGTGACTGTTTAGGAG+AGG | + | tig0022726:23851-23870 | None:intergenic | 40.0% | |
| CATCCAAGGCCTATTTAGAT+TGG | + | tig0022726:23904-23923 | None:intergenic | 40.0% | |
| TAAGGTGCAACTATGAAGCA+CGG | - | tig0022726:24027-24046 | Msa1401740:intron | 40.0% | |
| ! | AAGAAGCATGGATACGGATA+TGG | + | tig0022726:24195-24214 | None:intergenic | 40.0% |
| TATCCGTATCCATGCTTCTT+TGG | - | tig0022726:24195-24214 | Msa1401740:CDS | 40.0% | |
| ATCCGTATCCATGCTTCTTT+GGG | - | tig0022726:24196-24215 | Msa1401740:CDS | 40.0% | |
| TCTTGCGAGTATGTAGAACT+TGG | - | tig0022726:24521-24540 | Msa1401740:intron | 40.0% | |
| CTTGCGAGTATGTAGAACTT+GGG | - | tig0022726:24522-24541 | Msa1401740:intron | 40.0% | |
| ATCTCATTGATGCCAAAAGG+CGG | - | tig0022726:24553-24572 | Msa1401740:intron | 40.0% | |
| TACACTTGATTCAGAAGCAG+AGG | - | tig0022726:24786-24805 | Msa1401740:intron | 40.0% | |
| TGAATGGAACAGTACAGTAG+AGG | + | tig0022726:24910-24929 | None:intergenic | 40.0% | |
| TTCACACATCCATGCAGAAA+CGG | + | tig0022726:24945-24964 | None:intergenic | 40.0% | |
| AGATGTTCGGACTGAATGTA+AGG | - | tig0022726:25110-25129 | Msa1401740:intron | 40.0% | |
| GATGTTCGGACTGAATGTAA+GGG | - | tig0022726:25111-25130 | Msa1401740:intron | 40.0% | |
| ATGTTCGGACTGAATGTAAG+GGG | - | tig0022726:25112-25131 | Msa1401740:intron | 40.0% | |
| CTCGAACGTTGCTAAAAGAA+AGG | - | tig0022726:25152-25171 | Msa1401740:intron | 40.0% | |
| GCTAAAAGAAAGGCTAGTAC+AGG | - | tig0022726:25162-25181 | Msa1401740:intron | 40.0% | |
| TATTTCCACATTCGGAGCAT+CGG | + | tig0022726:25466-25485 | None:intergenic | 40.0% | |
| ATATATGTAGCCATGCCAGA+AGG | + | tig0022726:25717-25736 | None:intergenic | 40.0% | |
| TACGAGGTAGTGTTCTTGAA+GGG | - | tig0022726:25769-25788 | Msa1401740:intron | 40.0% | |
| ! | GATGTTTTACGAGTTGCTTC+TGG | - | tig0022726:25852-25871 | Msa1401740:intron | 40.0% |
| TGGTGCGAAAACAAAGACCA+CGG | - | tig0022726:19575-19594 | Msa1401740:CDS | 45.0% | |
| GAAAACAAAGACCACGGTGA+TGG | - | tig0022726:19581-19600 | Msa1401740:CDS | 45.0% | |
| GATGAACGTGTGCTATAGTC+CGG | - | tig0022726:19721-19740 | Msa1401740:CDS | 45.0% | |
| !! | AGAAAGGCGCCAATAGAGTA+AGG | - | tig0022726:19750-19769 | Msa1401740:CDS | 45.0% |
| !! | GAAAGGCGCCAATAGAGTAA+GGG | - | tig0022726:19751-19770 | Msa1401740:CDS | 45.0% |
| GTCTCCTTCCCTTACTCTAT+TGG | + | tig0022726:19762-19781 | None:intergenic | 45.0% | |
| ! | GGTGTTGTGTTATCAGGTCA+TGG | - | tig0022726:19859-19878 | Msa1401740:CDS | 45.0% |
| ATGGTACTCTACCTCTGTAG+AGG | + | tig0022726:20026-20045 | None:intergenic | 45.0% | |
| CTGCTACAAACTTCAGTGTG+AGG | - | tig0022726:20056-20075 | Msa1401740:intron | 45.0% | |
| GCTACAAACTTCAGTGTGAG+GGG | - | tig0022726:20058-20077 | Msa1401740:intron | 45.0% | |
| TCTAGAAAAGTTAGGCGGTG+CGG | - | tig0022726:20516-20535 | Msa1401740:intron | 45.0% | |
| ATATCACACCAACTGGCATC+TGG | + | tig0022726:20686-20705 | None:intergenic | 45.0% | |
| ! | AGATGCCAGTTGGTGTGATA+TGG | - | tig0022726:20685-20704 | Msa1401740:intron | 45.0% |
| ! | TGGTTGATTCACCTGGTTTG+AGG | - | tig0022726:21268-21287 | Msa1401740:intron | 45.0% |
| CATCCTGTTGTTCTTGTTCC+TGG | - | tig0022726:21318-21337 | Msa1401740:intron | 45.0% | |
| ATCCCAGGAACAAGAACAAC+AGG | + | tig0022726:21324-21343 | None:intergenic | 45.0% | |
| !! | TGACTGCTGGTTTGGAACTT+TGG | - | tig0022726:21346-21365 | Msa1401740:intron | 45.0% |
| !! | GACTGCTGGTTTGGAACTTT+GGG | - | tig0022726:21347-21366 | Msa1401740:intron | 45.0% |
| !! | CTGGTTTGGAACTTTGGGAA+GGG | - | tig0022726:21352-21371 | Msa1401740:intron | 45.0% |
| CTAAACAGTCCATCAGCACA+AGG | + | tig0022726:21381-21400 | None:intergenic | 45.0% | |
| !! | CTTGTGCTGATGGACTGTTT+AGG | - | tig0022726:21379-21398 | Msa1401740:intron | 45.0% |
| CGTTGCAAATGTAGCTGCAT+CGG | - | tig0022726:21616-21635 | Msa1401740:intron | 45.0% | |
| ATGCGGTCTCATTTGCATTG+CGG | - | tig0022726:22140-22159 | Msa1401740:CDS | 45.0% | |
| GGACTGAAAGGGTAGATGAA+AGG | - | tig0022726:22232-22251 | Msa1401740:intron | 45.0% | |
| AAGGAAATTTAAGGAGGCGG+AGG | - | tig0022726:22251-22270 | Msa1401740:intron | 45.0% | |
| TGGCAATTAGGCCTTTATGC+TGG | - | tig0022726:22708-22727 | Msa1401740:CDS | 45.0% | |
| CTCTCTCTGCATAATGAGAC+TGG | - | tig0022726:22740-22759 | Msa1401740:CDS | 45.0% | |
| ! | TCTGCATAATGAGACTGGTC+TGG | - | tig0022726:22745-22764 | Msa1401740:CDS | 45.0% |
| !!! | ATCAACACACCTCGGTGTTT+TGG | + | tig0022726:22931-22950 | None:intergenic | 45.0% |
| AAAGGAAAGCGGGTGAGATT+AGG | + | tig0022726:23120-23139 | None:intergenic | 45.0% | |
| AATATCAGCCCGGCATTTCT+CGG | - | tig0022726:23469-23488 | Msa1401740:intron | 45.0% | |
| ! | TTTGGAACACCGAGAAATGC+CGG | + | tig0022726:23481-23500 | None:intergenic | 45.0% |
| GAAACAGTTGTCGAGTCCAT+AGG | + | tig0022726:23823-23842 | None:intergenic | 45.0% | |
| ATCATGTGTCGTGTCAGTGT+CGG | + | tig0022726:24100-24119 | None:intergenic | 45.0% | |
| ATGGATACGGATATGGACAC+CGG | + | tig0022726:24188-24207 | None:intergenic | 45.0% | |
| ! | CACCCAAAGAAGCATGGATA+CGG | + | tig0022726:24201-24220 | None:intergenic | 45.0% |
| GTTCAACCGTTTGAAGACCA+AGG | + | tig0022726:24498-24517 | None:intergenic | 45.0% | |
| AAAAGGCGGTGAAACCATCT+GGG | - | tig0022726:24567-24586 | Msa1401740:intron | 45.0% | |
| TGGATTCGGGTCCTAATGAA+TGG | - | tig0022726:24596-24615 | Msa1401740:intron | 45.0% | |
| CGAAGCAAGTAACTGCGAAA+CGG | + | tig0022726:24758-24777 | None:intergenic | 45.0% | |
| GAATGTAAGGGGATATGCAG+AGG | - | tig0022726:25123-25142 | Msa1401740:intron | 45.0% | |
| TCGGCACGCTTCATCATATT+TGG | + | tig0022726:25222-25241 | None:intergenic | 45.0% | |
| AAATATGATGAAGCGTGCCG+AGG | - | tig0022726:25221-25240 | Msa1401740:intron | 45.0% | |
| ! | ATTTCCACATTCGGAGCATC+GGG | + | tig0022726:25465-25484 | None:intergenic | 45.0% |
| AGAACACGGTTCAATCCTTC+TGG | - | tig0022726:25699-25718 | Msa1401740:intron | 45.0% | |
| AAACAACGAGGTAGTGTACG+AGG | - | tig0022726:25753-25772 | Msa1401740:intron | 45.0% | |
| GTACGAGGTAGTGTTCTTGA+AGG | - | tig0022726:25768-25787 | Msa1401740:intron | 45.0% | |
| ATCGCCTCCAATAGTTACAC+CGG | + | tig0022726:25883-25902 | None:intergenic | 45.0% | |
| GTGTAACTATTGGAGGCGAT+AGG | - | tig0022726:25883-25902 | Msa1401740:intron | 45.0% | |
| AACGTGTGCTATAGTCCGGT+GGG | - | tig0022726:19725-19744 | Msa1401740:CDS | 50.0% | |
| TATAGTCCGGTGGGAGAGAA+AGG | - | tig0022726:19734-19753 | Msa1401740:CDS | 50.0% | |
| TGGGGCTATTGCTTCTTCCT+TGG | - | tig0022726:19969-19988 | Msa1401740:CDS | 50.0% | |
| GAAGTTTGTAGCAGCTGCGA+GGG | + | tig0022726:20050-20069 | None:intergenic | 50.0% | |
| TGAAGTTTGTAGCAGCTGCG+AGG | + | tig0022726:20051-20070 | None:intergenic | 50.0% | |
| !!! | GCACAAATTTTGAGGCGGCA+TGG | + | tig0022726:20724-20743 | None:intergenic | 50.0% |
| !! | GCGAGGCACAAATTTTGAGG+CGG | + | tig0022726:20729-20748 | None:intergenic | 50.0% |
| ! | GGTGCGAGGCACAAATTTTG+AGG | + | tig0022726:20732-20751 | None:intergenic | 50.0% |
| AAACCAGCAGTCACAATCCC+AGG | + | tig0022726:21339-21358 | None:intergenic | 50.0% | |
| ! | TGGGATTGTGACTGCTGGTT+TGG | - | tig0022726:21338-21357 | Msa1401740:intron | 50.0% |
| !! | GCTGGTTTGGAACTTTGGGA+AGG | - | tig0022726:21351-21370 | Msa1401740:intron | 50.0% |
| CTCAAGTGACTCCGTCTAGA+TGG | + | tig0022726:22441-22460 | None:intergenic | 50.0% | |
| CGAAGGGAAGAACTTGCACA+TGG | - | tig0022726:22880-22899 | Msa1401740:intron | 50.0% | |
| TGCACATGGCTTCCTATGAC+TGG | - | tig0022726:22894-22913 | Msa1401740:intron | 50.0% | |
| ACATGGCTTCCTATGACTGG+AGG | - | tig0022726:22897-22916 | Msa1401740:intron | 50.0% | |
| GAAAGACAGCCTCCAGTCAT+AGG | + | tig0022726:22909-22928 | None:intergenic | 50.0% | |
| GCTGTCTTTCCAAAACACCG+AGG | - | tig0022726:22919-22938 | Msa1401740:intron | 50.0% | |
| ! | GCGGTGTCTCAACCCATTTT+AGG | + | tig0022726:23390-23409 | None:intergenic | 50.0% |
| TTGGAACACCGAGAAATGCC+GGG | + | tig0022726:23480-23499 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+TGG | - | tig0022726:24038-24057 | Msa1401740:intron | 50.0% | |
| ! | TCCTTGGATTAGGCGTGTCA+TGG | - | tig0022726:24054-24073 | Msa1401740:intron | 50.0% |
| ACCATGACACGCCTAATCCA+AGG | + | tig0022726:24058-24077 | None:intergenic | 50.0% | |
| GATTAGGCGTGTCATGGTGT+CGG | - | tig0022726:24060-24079 | Msa1401740:CDS | 50.0% | |
| ! | TTTTGCAGAGCCGTGACTTC+TGG | - | tig0022726:24454-24473 | Msa1401740:intron | 50.0% |
| ! | CAGATGGTTTCACCGCCTTT+TGG | + | tig0022726:24568-24587 | None:intergenic | 50.0% |
| CAAAAGGCGGTGAAACCATC+TGG | - | tig0022726:24566-24585 | Msa1401740:intron | 50.0% | |
| AAAGGCGGTGAAACCATCTG+GGG | - | tig0022726:24568-24587 | Msa1401740:intron | 50.0% | |
| TCAGGGTTCATGTGTGCCAA+AGG | - | tig0022726:25666-25685 | Msa1401740:intron | 50.0% | |
| GGTTCATGTGTGCCAAAGGA+TGG | - | tig0022726:25670-25689 | Msa1401740:intron | 50.0% | |
| TGTTCTTCTGCGCCATCCTT+TGG | + | tig0022726:25685-25704 | None:intergenic | 50.0% | |
| AAGGATGGCGCAGAAGAACA+CGG | - | tig0022726:25685-25704 | Msa1401740:intron | 50.0% | |
| ACGGTTCAATCCTTCTGGCA+TGG | - | tig0022726:25704-25723 | Msa1401740:intron | 50.0% | |
| GAAGGGAGAAGTCTAGAGAG+CGG | - | tig0022726:25786-25805 | Msa1401740:intron | 50.0% | |
| ! | AGCGCGTGCCAACAACATTT+TGG | - | tig0022726:25809-25828 | Msa1401740:intron | 50.0% |
| ! | GCGCGTGCCAACAACATTTT+GGG | - | tig0022726:25810-25829 | Msa1401740:intron | 50.0% |
| ! | TACAAGGCACTCCATCACCG+TGG | + | tig0022726:19595-19614 | None:intergenic | 55.0% |
| GAACGTGTGCTATAGTCCGG+TGG | - | tig0022726:19724-19743 | Msa1401740:CDS | 55.0% | |
| GGCGCCAATAGAGTAAGGGA+AGG | - | tig0022726:19755-19774 | Msa1401740:CDS | 55.0% | |
| TTGTAGCAGCTGCGAGGGAA+TGG | + | tig0022726:20045-20064 | None:intergenic | 55.0% | |
| GTTCCTGGGATTGTGACTGC+TGG | - | tig0022726:21333-21352 | Msa1401740:intron | 55.0% | |
| GAAGGGAGACCTTGTGCTGA+TGG | - | tig0022726:21369-21388 | Msa1401740:intron | 55.0% | |
| !!! | GCTGCATCGGCTGCTTTTGT+CGG | - | tig0022726:21629-21648 | Msa1401740:intron | 55.0% |
| TCTCATTTGCATTGCGGCCG+TGG | - | tig0022726:22146-22165 | Msa1401740:CDS | 55.0% | |
| CGGCCGTGGATTTGATGTCA+TGG | - | tig0022726:22160-22179 | Msa1401740:CDS | 55.0% | |
| ACCCACCAGGAATTCGAGTC+AGG | - | tig0022726:22768-22787 | Msa1401740:intron | 55.0% | |
| ! | CCCTGACTCGAATTCCTGGT+GGG | + | tig0022726:22772-22791 | None:intergenic | 55.0% |
| CCCACCAGGAATTCGAGTCA+GGG | - | tig0022726:22769-22788 | Msa1401740:intron | 55.0% | |
| ! | ACTGCCCTGACTCGAATTCC+TGG | + | tig0022726:22776-22795 | None:intergenic | 55.0% |
| ATCGTCGGCAGCAACAAGCT+CGG | + | tig0022726:22801-22820 | None:intergenic | 55.0% | |
| ! | GCTGCCGACGATTTTGCTTC+TGG | - | tig0022726:22809-22828 | Msa1401740:intron | 55.0% |
| GCACGGACACTCCTTGGATT+AGG | - | tig0022726:24044-24063 | Msa1401740:intron | 55.0% | |
| GTCAATGTCCGTGTCGTGTC+CGG | - | tig0022726:24166-24185 | Msa1401740:CDS | 55.0% | |
| TATGGACACCGGACACGACA+CGG | + | tig0022726:24177-24196 | None:intergenic | 55.0% | |
| CGCTTGCACCCAAAGAAGCA+TGG | + | tig0022726:24207-24226 | None:intergenic | 55.0% | |
| ! | TGAAACCATCTGGGGCGACT+TGG | - | tig0022726:24576-24595 | Msa1401740:intron | 55.0% |
| ! | CATCTGGGGCGACTTGGATT+CGG | - | tig0022726:24582-24601 | Msa1401740:intron | 55.0% |
| ! | ATCTGGGGCGACTTGGATTC+GGG | - | tig0022726:24583-24602 | Msa1401740:intron | 55.0% |
| GCCGAGGCTCATTTCTCTCA+CGG | - | tig0022726:25237-25256 | Msa1401740:intron | 55.0% | |
| CCCGTGAGAGAAATGAGCCT+CGG | + | tig0022726:25241-25260 | None:intergenic | 55.0% | |
| CCGAGGCTCATTTCTCTCAC+GGG | - | tig0022726:25238-25257 | Msa1401740:intron | 55.0% | |
| ACTACCCGATGCTCCGAATG+TGG | - | tig0022726:25458-25477 | Msa1401740:CDS | 55.0% | |
| GGAGCCACCGGTGTAACTAT+TGG | - | tig0022726:25873-25892 | Msa1401740:intron | 55.0% | |
| GCCACCGGTGTAACTATTGG+AGG | - | tig0022726:25876-25895 | Msa1401740:intron | 55.0% | |
| GCCTCCAATAGTTACACCGG+TGG | + | tig0022726:25880-25899 | None:intergenic | 55.0% | |
| GCGTGTCAGTGCGAAGACGA+AGG | - | tig0022726:19546-19565 | Msa1401740:CDS | 60.0% | |
| CAGTGCGAAGACGAAGGTCG+TGG | - | tig0022726:19552-19571 | Msa1401740:CDS | 60.0% | |
| TGCGAAGACGAAGGTCGTGG+TGG | - | tig0022726:19555-19574 | Msa1401740:CDS | 60.0% | |
| TTGGCGCCTTTCTCTCCCAC+CGG | + | tig0022726:19743-19762 | None:intergenic | 60.0% | |
| ! | GCCCTGACTCGAATTCCTGG+TGG | + | tig0022726:22773-22792 | None:intergenic | 60.0% |
| TCGTCGGCAGCAACAAGCTC+GGG | + | tig0022726:22800-22819 | None:intergenic | 60.0% | |
| GTTGAGACACCGCCTCCCAT+GGG | - | tig0022726:23397-23416 | Msa1401740:intron | 60.0% | |
| CGAATCCAAGTCGCCCCAGA+TGG | + | tig0022726:24584-24603 | None:intergenic | 60.0% | |
| !! | CGAGTTGCTTCTGGAGCCAC+CGG | - | tig0022726:25861-25880 | Msa1401740:intron | 60.0% |
| !! | GAGACTGGTCTGGACCCACC+AGG | - | tig0022726:22755-22774 | Msa1401740:CDS | 65.0% |
| GGTTGAGACACCGCCTCCCA+TGG | - | tig0022726:23396-23415 | Msa1401740:intron | 65.0% | |
| GGACCACCACCACCACCCAT+GGG | + | tig0022726:23415-23434 | None:intergenic | 65.0% | |
| TGGACCACCACCACCACCCA+TGG | + | tig0022726:23416-23435 | None:intergenic | 65.0% | |
| !! | ATGGGTGGTGGTGGTGGTCC+AGG | - | tig0022726:23415-23434 | Msa1401740:intron | 65.0% |
| !! | GTGGTGGTGGTGGTCCAGGT+TGG | - | tig0022726:23419-23438 | Msa1401740:intron | 65.0% |
| AGGCGGTGCGGATCAACCGC+CGG | - | tig0022726:20528-20547 | Msa1401740:intron | 70.0% | |
| GAGACACCGCCTCCCATGGG+TGG | - | tig0022726:23400-23419 | Msa1401740:intron | 70.0% | |
| ACACCGCCTCCCATGGGTGG+TGG | - | tig0022726:23403-23422 | Msa1401740:intron | 70.0% | |
| CCACCACCACCCATGGGAGG+CGG | + | tig0022726:23409-23428 | None:intergenic | 70.0% | |
| CCACCACCACCACCCATGGG+AGG | + | tig0022726:23412-23431 | None:intergenic | 70.0% | |
| !! | CCTCCCATGGGTGGTGGTGG+TGG | - | tig0022726:23409-23428 | Msa1401740:intron | 70.0% |
| ! | CCGCCTCCCATGGGTGGTGG+TGG | - | tig0022726:23406-23425 | Msa1401740:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022726 | gene | 19543 | 25956 | 19543 | ID=Msa1401740;Name=Msa1401740 |
| tig0022726 | mRNA | 19543 | 25956 | 19543 | ID=Msa1401740-mRNA-1;Parent=Msa1401740;Name=Msa1401740-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.71|0.25|0.87|1|1|8|0|696 |
| tig0022726 | exon | 25888 | 25956 | 25888 | ID=Msa1401740-mRNA-1:exon:18593;Parent=Msa1401740-mRNA-1 |
| tig0022726 | exon | 25427 | 25624 | 25427 | ID=Msa1401740-mRNA-1:exon:18592;Parent=Msa1401740-mRNA-1 |
| tig0022726 | exon | 24057 | 24262 | 24057 | ID=Msa1401740-mRNA-1:exon:18591;Parent=Msa1401740-mRNA-1 |
| tig0022726 | exon | 22559 | 22781 | 22559 | ID=Msa1401740-mRNA-1:exon:18590;Parent=Msa1401740-mRNA-1 |
| tig0022726 | exon | 21948 | 22231 | 21948 | ID=Msa1401740-mRNA-1:exon:18589;Parent=Msa1401740-mRNA-1 |
| tig0022726 | exon | 20692 | 21037 | 20692 | ID=Msa1401740-mRNA-1:exon:18588;Parent=Msa1401740-mRNA-1 |
| tig0022726 | exon | 20171 | 20436 | 20171 | ID=Msa1401740-mRNA-1:exon:18587;Parent=Msa1401740-mRNA-1 |
| tig0022726 | exon | 19543 | 20041 | 19543 | ID=Msa1401740-mRNA-1:exon:18586;Parent=Msa1401740-mRNA-1 |
| tig0022726 | CDS | 25888 | 25956 | 25888 | ID=Msa1401740-mRNA-1:cds;Parent=Msa1401740-mRNA-1 |
| tig0022726 | CDS | 25427 | 25624 | 25427 | ID=Msa1401740-mRNA-1:cds;Parent=Msa1401740-mRNA-1 |
| tig0022726 | CDS | 24057 | 24262 | 24057 | ID=Msa1401740-mRNA-1:cds;Parent=Msa1401740-mRNA-1 |
| tig0022726 | CDS | 22559 | 22781 | 22559 | ID=Msa1401740-mRNA-1:cds;Parent=Msa1401740-mRNA-1 |
| tig0022726 | CDS | 21948 | 22231 | 21948 | ID=Msa1401740-mRNA-1:cds;Parent=Msa1401740-mRNA-1 |
| tig0022726 | CDS | 20692 | 21037 | 20692 | ID=Msa1401740-mRNA-1:cds;Parent=Msa1401740-mRNA-1 |
| tig0022726 | CDS | 20171 | 20436 | 20171 | ID=Msa1401740-mRNA-1:cds;Parent=Msa1401740-mRNA-1 |
| tig0022726 | CDS | 19543 | 20041 | 19543 | ID=Msa1401740-mRNA-1:cds;Parent=Msa1401740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
