Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404230 | XP_013458437.1 | 98.819 | 508 | 6 | 0 | 1 | 508 | 1 | 508 | 0.0 | 1039 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404230 | sp|Q9S7B5|THRC1_ARATH | 77.099 | 524 | 97 | 7 | 1 | 504 | 1 | 521 | 0.0 | 811 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404230 | A0A072UTS3 | 98.819 | 508 | 6 | 0 | 1 | 508 | 1 | 508 | 0.0 | 1039 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1404230 | Msa1414380 | 0.800908 | 1.155959e-48 | -8.615850e-47 |
| Msa0810950 | Msa1404230 | 0.810347 | 1.205863e-50 | -8.615850e-47 |
| Msa0902370 | Msa1404230 | 0.821549 | 3.806516e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404230 | MtrunA17_Chr4g0070781 | 91.142 | 508 | 6 | 2 | 1 | 508 | 1 | 469 | 0.0 | 932 |
| Msa1404230 | MtrunA17_Chr2g0329831 | 83.441 | 465 | 76 | 1 | 45 | 508 | 66 | 530 | 0.0 | 817 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404230 | AT4G29840.1 | 77.099 | 524 | 97 | 7 | 1 | 504 | 1 | 521 | 0.0 | 811 |
| Msa1404230 | AT1G72810.1 | 81.545 | 466 | 81 | 3 | 41 | 504 | 51 | 513 | 0.0 | 792 |
Find 141 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAAATGTGTAAAGATTT+AGG | 0.134689 | tig0023052:+20624 | Msa1404230:CDS |
| TTCTGAATTGCCGATATATT+TGG | 0.177867 | tig0023052:+20461 | Msa1404230:CDS |
| AGTAAGATTGATTATCATTC+TGG | 0.199505 | tig0023052:+21026 | Msa1404230:CDS |
| CTCAGGAATAATGGGGTTAT+TGG | 0.245982 | tig0023052:+20948 | Msa1404230:CDS |
| ATTGTACCTGGTGGAAATTT+AGG | 0.246107 | tig0023052:+20576 | Msa1404230:CDS |
| ATATCATCAGGGTGGATTTC+TGG | 0.247855 | tig0023052:-20051 | None:intergenic |
| TTGATTAAACTCAGGAATAA+TGG | 0.260884 | tig0023052:+20939 | Msa1404230:CDS |
| GTGAAGTTGTTGGCGGTGGC+AGG | 0.266465 | tig0023052:-19802 | None:intergenic |
| TCGTCGAGGGAGTAGGATTC+AGG | 0.266996 | tig0023052:-19862 | None:intergenic |
| GTGTCTGTTAAGGCTGATTT+TGG | 0.270510 | tig0023052:+21086 | Msa1404230:CDS |
| TCAAAATGTGTAAAGATTTA+GGG | 0.279636 | tig0023052:+20625 | Msa1404230:CDS |
| GGAGTTGAATGGGACGTATT+TGG | 0.279906 | tig0023052:-19827 | None:intergenic |
| ATGGTTGTATGAAGCTGATT+AGG | 0.316364 | tig0023052:+20430 | Msa1404230:CDS |
| ACCACTTGGCCTTACGGTTC+AGG | 0.317729 | tig0023052:+20000 | Msa1404230:CDS |
| TTGTAGGCATGAACGATCTT+TGG | 0.318466 | tig0023052:+20133 | Msa1404230:CDS |
| TGATTAAACTCAGGAATAAT+GGG | 0.322866 | tig0023052:+20940 | Msa1404230:CDS |
| GGCCTTACGGTTCAGGTGTA+TGG | 0.326197 | tig0023052:+20007 | Msa1404230:CDS |
| TTGTACCTGGTGGAAATTTA+GGG | 0.337501 | tig0023052:+20577 | Msa1404230:CDS |
| TTCAATTCGTAAACTATTCA+AGG | 0.352361 | tig0023052:-20490 | None:intergenic |
| CGGCGGTTATGTGTGGGTTT+AGG | 0.354555 | tig0023052:-19688 | None:intergenic |
| CACTGTGGTAATAGCCATAC+TGG | 0.361097 | tig0023052:+20162 | Msa1404230:CDS |
| GATCTTTGAAGCTTCCAGTA+TGG | 0.386403 | tig0023052:-20176 | None:intergenic |
| CGAAGTTCGACGGCGCGTAC+TGG | 0.391694 | tig0023052:+19947 | Msa1404230:CDS |
| ACTGGAAGCTTCAAAGATCT+TGG | 0.393842 | tig0023052:+20180 | Msa1404230:CDS |
| TGTAGGCATGAACGATCTTT+GGG | 0.399165 | tig0023052:+20134 | Msa1404230:CDS |
| TTGTATTTGTATTATAAGAA+TGG | 0.406563 | tig0023052:+20702 | Msa1404230:CDS |
| TCTGCTTATTGCGCTTCAGC+TGG | 0.409965 | tig0023052:+20303 | Msa1404230:CDS |
| TATCATTCTGGGAATATTGC+TGG | 0.410252 | tig0023052:+21038 | Msa1404230:CDS |
| AAGGAATTCGCCAAATATAT+CGG | 0.411303 | tig0023052:-20471 | None:intergenic |
| ATGTTTATTTGTCCTCATAC+TGG | 0.412669 | tig0023052:+20900 | Msa1404230:CDS |
| ATCCATCAATTCCTCTTCAC+TGG | 0.414822 | tig0023052:-20850 | None:intergenic |
| TTGAATAGTTTACGAATTGA+AGG | 0.416111 | tig0023052:+20492 | Msa1404230:CDS |
| TCTGGGAATATTGCTGGTAT+TGG | 0.416558 | tig0023052:+21044 | Msa1404230:CDS |
| ATGGCACTTGCTGATTCAAC+TGG | 0.418295 | tig0023052:+20876 | Msa1404230:CDS |
| TTTGCTTCTGCTATTCAGAT+TGG | 0.423112 | tig0023052:+20762 | Msa1404230:CDS |
| AGCCAGTGAAGAGGAATTGA+TGG | 0.425665 | tig0023052:+20848 | Msa1404230:CDS |
| AATGACTGTGCTTGTTAGTC+AGG | 0.431806 | tig0023052:+20203 | Msa1404230:CDS |
| GGGAAAACCACTTGGCCTTA+CGG | 0.436987 | tig0023052:+19994 | Msa1404230:CDS |
| TTCAGGTGTATGGAGCAAAA+AGG | 0.437179 | tig0023052:+20017 | Msa1404230:CDS |
| AAAGCGCTAACGATATCATC+AGG | 0.438146 | tig0023052:-20063 | None:intergenic |
| TTTGCAGCAGTTTGATTGGC+AGG | 0.441607 | tig0023052:+20539 | Msa1404230:CDS |
| TGGTTGTATGAAGCTGATTA+GGG | 0.444344 | tig0023052:+20431 | Msa1404230:CDS |
| TAATCCACCTGTGTCTGTTA+AGG | 0.451369 | tig0023052:+21076 | Msa1404230:CDS |
| GGCGATGTCTTTGATGTTGT+CGG | 0.451433 | tig0023052:-19770 | None:intergenic |
| GAGTCGAAGGTGGAGTTGAA+TGG | 0.451902 | tig0023052:-19838 | None:intergenic |
| GTATTTGGCGGTGAAGTTGT+TGG | 0.463189 | tig0023052:-19812 | None:intergenic |
| ACAGCTCTATCAATTGAAAC+AGG | 0.468555 | tig0023052:-20789 | None:intergenic |
| GTAAGATTGATTATCATTCT+GGG | 0.468628 | tig0023052:+21027 | Msa1404230:CDS |
| ATTTGTATTATAAGAATGGT+TGG | 0.468821 | tig0023052:+20706 | Msa1404230:CDS |
| TGTTGGCGGTGGCAGGGTGA+CGG | 0.469152 | tig0023052:-19795 | None:intergenic |
| AGTCGAAGGTGGAGTTGAAT+GGG | 0.469459 | tig0023052:-19837 | None:intergenic |
| ATCGTCTACCGCAGCAACTC+CGG | 0.471571 | tig0023052:+19886 | Msa1404230:CDS |
| GGCGGTGGCAGGGTGACGGC+GGG | 0.472151 | tig0023052:-19791 | None:intergenic |
| AACCTCTTCGACTCGCGTGT+GGG | 0.484266 | tig0023052:+19973 | Msa1404230:CDS |
| CCAGGTACAATCACCCAATC+AGG | 0.486304 | tig0023052:-20564 | None:intergenic |
| AGAGTGGTTGTTGGTGGTAG+CGG | 0.486794 | tig0023052:-19728 | None:intergenic |
| GGAGTTGGTTGTGCTTCCAC+CGG | 0.488070 | tig0023052:+20261 | Msa1404230:CDS |
| AACCGTCCGTTGGTCGGAGT+TGG | 0.488563 | tig0023052:+20246 | Msa1404230:CDS |
| TTGATTGGCAGGTACCTGAT+TGG | 0.489621 | tig0023052:+20550 | Msa1404230:CDS |
| CGCGTGTGGGGAAAACCACT+TGG | 0.493520 | tig0023052:+19986 | Msa1404230:CDS |
| CCTGATTGGGTGATTGTACC+TGG | 0.494816 | tig0023052:+20564 | Msa1404230:CDS |
| ATGTTGTCGGTGGCGAGATC+CGG | 0.497930 | tig0023052:-19757 | None:intergenic |
| TGATTGGCAGGTACCTGATT+GGG | 0.499461 | tig0023052:+20551 | Msa1404230:CDS |
| TGGAGCCAGTGAGAGGGTTG+TGG | 0.505753 | tig0023052:+20968 | Msa1404230:CDS |
| TTGATTCAACCGGTATCAAA+TGG | 0.513680 | tig0023052:+20375 | Msa1404230:CDS |
| GTGGTTGTTAGTACTGCTCA+TGG | 0.517105 | tig0023052:+20987 | Msa1404230:CDS |
| GGCGGTGAAGTTGTTGGCGG+TGG | 0.517738 | tig0023052:-19806 | None:intergenic |
| ACCAATGCACCATTTGATAC+CGG | 0.522774 | tig0023052:-20384 | None:intergenic |
| CGGTGATGGAGAGTGGTTGT+TGG | 0.523963 | tig0023052:-19737 | None:intergenic |
| CGTCGAGGGAGTAGGATTCA+GGG | 0.524958 | tig0023052:-19861 | None:intergenic |
| TGAAGTTGTTGGCGGTGGCA+GGG | 0.527974 | tig0023052:-19801 | None:intergenic |
| TCGCGAGTGCTTCGATGTCA+TGG | 0.529208 | tig0023052:-19927 | None:intergenic |
| AACCGCGCAGTTGATTCAAC+CGG | 0.530203 | tig0023052:+20365 | Msa1404230:CDS |
| GTTAAAGCCACACCAGTATG+AGG | 0.530207 | tig0023052:-20912 | None:intergenic |
| ACCGGTATCAAATGGTGCAT+TGG | 0.530776 | tig0023052:+20383 | Msa1404230:CDS |
| TGGCGGTGGCAGGGTGACGG+CGG | 0.530809 | tig0023052:-19792 | None:intergenic |
| TGTTGATAAGATACCAAGGC+TGG | 0.532452 | tig0023052:+20650 | Msa1404230:CDS |
| GTTGGTGGTAGCGGTGGCGA+CGG | 0.534404 | tig0023052:-19719 | None:intergenic |
| TAACTGCTTTGATTAAACTC+AGG | 0.539179 | tig0023052:+20931 | Msa1404230:CDS |
| GACGATTTCGTCGAGGGAGT+AGG | 0.540791 | tig0023052:-19869 | None:intergenic |
| AACAACCACAACCCTCTCAC+TGG | 0.543564 | tig0023052:-20973 | None:intergenic |
| AAAACGATGGTGGAGAATGA+AGG | 0.547108 | tig0023052:-19658 | None:intergenic |
| ACCTCTTCGACTCGCGTGTG+GGG | 0.547841 | tig0023052:+19974 | Msa1404230:CDS |
| GCTTGTGCACAAACCAGCCT+TGG | 0.551031 | tig0023052:-20663 | None:intergenic |
| TGCTTCCACCGGTGATACAT+CGG | 0.553305 | tig0023052:+20272 | Msa1404230:CDS |
| TTAGTCAGGTAAATCGCCTC+CGG | 0.556393 | tig0023052:+20217 | Msa1404230:CDS |
| TATGCATTGAAGAATTCTGA+TGG | 0.567257 | tig0023052:+20813 | Msa1404230:CDS |
| GCGGTAGACGATTTCGTCGA+GGG | 0.570561 | tig0023052:-19875 | None:intergenic |
| GTGGACGTCGAGAAGGCCGC+CGG | 0.570710 | tig0023052:-19905 | None:intergenic |
| CAGCGCAGCCGATGTATCAC+CGG | 0.572600 | tig0023052:-20280 | None:intergenic |
| TCCCCACACGCGAGTCGAAG+AGG | 0.573166 | tig0023052:-19975 | None:intergenic |
| GGATTCAGGGGAGTCGAAGG+TGG | 0.574210 | tig0023052:-19848 | None:intergenic |
| ATGCATTGAAGAATTCTGAT+GGG | 0.574216 | tig0023052:+20814 | Msa1404230:CDS |
| TATTTGTCCTCATACTGGTG+TGG | 0.574702 | tig0023052:+20905 | Msa1404230:CDS |
| CAACAACCACTCTCCATCAC+CGG | 0.575317 | tig0023052:+19738 | Msa1404230:CDS |
| GAAGCACTCGCGAAGTTCGA+CGG | 0.577029 | tig0023052:+19937 | Msa1404230:CDS |
| GGGTTATTGGAGCCAGTGAG+AGG | 0.577743 | tig0023052:+20961 | Msa1404230:CDS |
| GATTAAACTCAGGAATAATG+GGG | 0.580133 | tig0023052:+20941 | Msa1404230:CDS |
| GAGTGTGCGGCGGTTATGTG+TGG | 0.580993 | tig0023052:-19695 | None:intergenic |
| GTAGGATTCAGGGGAGTCGA+AGG | 0.587464 | tig0023052:-19851 | None:intergenic |
| CCTTGGACTACAAACTACTT+CGG | 0.589244 | tig0023052:-21152 | None:intergenic |
| AAAATGAACCGTCCGTTGGT+CGG | 0.591612 | tig0023052:+20240 | Msa1404230:CDS |
| CGGTGGCGACGGTGAGTGTG+CGG | 0.594405 | tig0023052:-19708 | None:intergenic |
| TTCTTATAATACAAATACAA+AGG | 0.596623 | tig0023052:-20699 | None:intergenic |
| CTCCATACACCTGAACCGTA+AGG | 0.596883 | tig0023052:-20009 | None:intergenic |
| CGAGATCCGGTGATGGAGAG+TGG | 0.597957 | tig0023052:-19744 | None:intergenic |
| TGATGGAGAGTGGTTGTTGG+TGG | 0.599110 | tig0023052:-19734 | None:intergenic |
| GCACAACCAACTCCGACCAA+CGG | 0.599617 | tig0023052:-20252 | None:intergenic |
| CGCAGCCGATGTATCACCGG+TGG | 0.601314 | tig0023052:-20277 | None:intergenic |
| TGTCATGGTGGACGTCGAGA+AGG | 0.606780 | tig0023052:-19912 | None:intergenic |
| TCGGTGGCGAGATCCGGTGA+TGG | 0.607772 | tig0023052:-19751 | None:intergenic |
| TGTTGAGGAAGCCAGTGAAG+AGG | 0.612541 | tig0023052:+20839 | Msa1404230:CDS |
| CCGGAAAATGAACCGTCCGT+TGG | 0.613505 | tig0023052:+20236 | Msa1404230:CDS |
| GAAGGCCGCCGGAGTTGCTG+CGG | 0.613672 | tig0023052:-19894 | None:intergenic |
| AACCAACTCCGACCAACGGA+CGG | 0.618009 | tig0023052:-20248 | None:intergenic |
| AGTGTGCGGCGGTTATGTGT+GGG | 0.619041 | tig0023052:-19694 | None:intergenic |
| GTGGTTGTTGGTGGTAGCGG+TGG | 0.620617 | tig0023052:-19725 | None:intergenic |
| GAATTCTGATGGGATTGTTG+AGG | 0.621403 | tig0023052:+20824 | Msa1404230:CDS |
| AAATCAGCCTTAACAGACAC+AGG | 0.623027 | tig0023052:-21083 | None:intergenic |
| GTCGAGGGAGTAGGATTCAG+GGG | 0.625447 | tig0023052:-19860 | None:intergenic |
| TTTGGCGGTGAAGTTGTTGG+CGG | 0.626032 | tig0023052:-19809 | None:intergenic |
| GTTGAATGGGACGTATTTGG+CGG | 0.632315 | tig0023052:-19824 | None:intergenic |
| CATCAGGGTGGATTTCTGGT+AGG | 0.634205 | tig0023052:-20047 | None:intergenic |
| GGTTATTGGAGCCAGTGAGA+GGG | 0.634474 | tig0023052:+20962 | Msa1404230:CDS |
| TGCGGTAGACGATTTCGTCG+AGG | 0.635297 | tig0023052:-19876 | None:intergenic |
| ACCTGAACCGTAAGGCCAAG+TGG | 0.644246 | tig0023052:-20001 | None:intergenic |
| AGAGTTTAAAGCGATTAAAG+CGG | 0.650024 | tig0023052:+20731 | Msa1404230:CDS |
| TGGCGACGGTGAGTGTGCGG+CGG | 0.651305 | tig0023052:-19705 | None:intergenic |
| CGCTAACGATATCATCAGGG+TGG | 0.654724 | tig0023052:-20059 | None:intergenic |
| ATATTCCCTAAATTTCCACC+AGG | 0.655231 | tig0023052:-20582 | None:intergenic |
| AGAGGAATTGATGGATGCAA+TGG | 0.657723 | tig0023052:+20857 | Msa1404230:CDS |
| GGCTTGTTGATAAGATACCA+AGG | 0.657922 | tig0023052:+20646 | Msa1404230:CDS |
| GCTGGTAGGAAAACAATCGA+AGG | 0.673402 | tig0023052:-20330 | None:intergenic |
| GATGTCTTTGATGTTGTCGG+TGG | 0.677706 | tig0023052:-19767 | None:intergenic |
| GTCTACCGCAGCAACTCCGG+CGG | 0.686741 | tig0023052:+19889 | Msa1404230:CDS |
| AAGCGCTAACGATATCATCA+GGG | 0.689325 | tig0023052:-20062 | None:intergenic |
| TCAGCCTTAACAGACACAGG+TGG | 0.717631 | tig0023052:-21080 | None:intergenic |
| CGAGTGCTTCGATGTCATGG+TGG | 0.720420 | tig0023052:-19924 | None:intergenic |
| GATCTTTGGGTTAAACACTG+TGG | 0.724956 | tig0023052:+20147 | Msa1404230:CDS |
| TACCGGTTGAATCAACTGCG+CGG | 0.770329 | tig0023052:-20367 | None:intergenic |
| GATTGGGTGATTGTACCTGG+TGG | 0.786775 | tig0023052:+20567 | Msa1404230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTATGCATTTTACAA+AGG | + | tig0023052:20600-20619 | Msa1404230:CDS | 15.0% |
| !! | TTCTTATAATACAAATACAA+AGG | - | tig0023052:20702-20721 | None:intergenic | 15.0% |
| !! | TTGTATTTGTATTATAAGAA+TGG | + | tig0023052:20702-20721 | Msa1404230:CDS | 15.0% |
| !!! | AATATTTATGCATTTTACAA+AGG | + | tig0023052:20600-20619 | Msa1404230:CDS | 15.0% |
| !! | TTCTTATAATACAAATACAA+AGG | - | tig0023052:20702-20721 | None:intergenic | 15.0% |
| !! | TTGTATTTGTATTATAAGAA+TGG | + | tig0023052:20702-20721 | Msa1404230:CDS | 15.0% |
| !! | TTCAAAATGTGTAAAGATTT+AGG | + | tig0023052:20624-20643 | Msa1404230:CDS | 20.0% |
| !! | TCAAAATGTGTAAAGATTTA+GGG | + | tig0023052:20625-20644 | Msa1404230:CDS | 20.0% |
| !! | ATTTGTATTATAAGAATGGT+TGG | + | tig0023052:20706-20725 | Msa1404230:CDS | 20.0% |
| !! | TTCAAAATGTGTAAAGATTT+AGG | + | tig0023052:20624-20643 | Msa1404230:CDS | 20.0% |
| !! | TCAAAATGTGTAAAGATTTA+GGG | + | tig0023052:20625-20644 | Msa1404230:CDS | 20.0% |
| !! | ATTTGTATTATAAGAATGGT+TGG | + | tig0023052:20706-20725 | Msa1404230:CDS | 20.0% |
| !!! | AGTATTGATACTGATTTTGA+TGG | + | tig0023052:20411-20430 | Msa1404230:CDS | 25.0% |
| ! | TTCAATTCGTAAACTATTCA+AGG | - | tig0023052:20493-20512 | None:intergenic | 25.0% |
| ! | TTGAATAGTTTACGAATTGA+AGG | + | tig0023052:20492-20511 | Msa1404230:CDS | 25.0% |
| ! | TTGATTAAACTCAGGAATAA+TGG | + | tig0023052:20939-20958 | Msa1404230:CDS | 25.0% |
| ! | TGATTAAACTCAGGAATAAT+GGG | + | tig0023052:20940-20959 | Msa1404230:CDS | 25.0% |
| ! | AGTAAGATTGATTATCATTC+TGG | + | tig0023052:21026-21045 | Msa1404230:CDS | 25.0% |
| ! | GTAAGATTGATTATCATTCT+GGG | + | tig0023052:21027-21046 | Msa1404230:CDS | 25.0% |
| !!! | AGTATTGATACTGATTTTGA+TGG | + | tig0023052:20411-20430 | Msa1404230:CDS | 25.0% |
| ! | TTCAATTCGTAAACTATTCA+AGG | - | tig0023052:20493-20512 | None:intergenic | 25.0% |
| ! | TTGAATAGTTTACGAATTGA+AGG | + | tig0023052:20492-20511 | Msa1404230:CDS | 25.0% |
| ! | TTGATTAAACTCAGGAATAA+TGG | + | tig0023052:20939-20958 | Msa1404230:CDS | 25.0% |
| ! | TGATTAAACTCAGGAATAAT+GGG | + | tig0023052:20940-20959 | Msa1404230:CDS | 25.0% |
| ! | AGTAAGATTGATTATCATTC+TGG | + | tig0023052:21026-21045 | Msa1404230:CDS | 25.0% |
| ! | GTAAGATTGATTATCATTCT+GGG | + | tig0023052:21027-21046 | Msa1404230:CDS | 25.0% |
| ! | AAGGTAACTCTAATCTTTTC+TGG | + | tig0023052:20088-20107 | Msa1404230:CDS | 30.0% |
| ! | AGGTAACTCTAATCTTTTCT+GGG | + | tig0023052:20089-20108 | Msa1404230:CDS | 30.0% |
| TTCTGAATTGCCGATATATT+TGG | + | tig0023052:20461-20480 | Msa1404230:CDS | 30.0% | |
| AAGGAATTCGCCAAATATAT+CGG | - | tig0023052:20474-20493 | None:intergenic | 30.0% | |
| ! | AGAGTTTAAAGCGATTAAAG+CGG | + | tig0023052:20731-20750 | Msa1404230:CDS | 30.0% |
| TATGCATTGAAGAATTCTGA+TGG | + | tig0023052:20813-20832 | Msa1404230:CDS | 30.0% | |
| ATGCATTGAAGAATTCTGAT+GGG | + | tig0023052:20814-20833 | Msa1404230:CDS | 30.0% | |
| ATGTTTATTTGTCCTCATAC+TGG | + | tig0023052:20900-20919 | Msa1404230:CDS | 30.0% | |
| TAACTGCTTTGATTAAACTC+AGG | + | tig0023052:20931-20950 | Msa1404230:CDS | 30.0% | |
| GATTAAACTCAGGAATAATG+GGG | + | tig0023052:20941-20960 | Msa1404230:CDS | 30.0% | |
| ! | AAGGTAACTCTAATCTTTTC+TGG | + | tig0023052:20088-20107 | Msa1404230:CDS | 30.0% |
| ! | AGGTAACTCTAATCTTTTCT+GGG | + | tig0023052:20089-20108 | Msa1404230:CDS | 30.0% |
| TTCTGAATTGCCGATATATT+TGG | + | tig0023052:20461-20480 | Msa1404230:CDS | 30.0% | |
| AAGGAATTCGCCAAATATAT+CGG | - | tig0023052:20474-20493 | None:intergenic | 30.0% | |
| ! | AGAGTTTAAAGCGATTAAAG+CGG | + | tig0023052:20731-20750 | Msa1404230:CDS | 30.0% |
| TATGCATTGAAGAATTCTGA+TGG | + | tig0023052:20813-20832 | Msa1404230:CDS | 30.0% | |
| ATGCATTGAAGAATTCTGAT+GGG | + | tig0023052:20814-20833 | Msa1404230:CDS | 30.0% | |
| ATGTTTATTTGTCCTCATAC+TGG | + | tig0023052:20900-20919 | Msa1404230:CDS | 30.0% | |
| TAACTGCTTTGATTAAACTC+AGG | + | tig0023052:20931-20950 | Msa1404230:CDS | 30.0% | |
| GATTAAACTCAGGAATAATG+GGG | + | tig0023052:20941-20960 | Msa1404230:CDS | 30.0% | |
| !! | TTTAGGAGCGTTAAAAACGA+TGG | - | tig0023052:19674-19693 | None:intergenic | 35.0% |
| TGTATGGAGCAAAAAGGAAT+GGG | + | tig0023052:20023-20042 | Msa1404230:CDS | 35.0% | |
| ! | TTGAGATTTTATTCGCTGGT+AGG | - | tig0023052:20347-20366 | None:intergenic | 35.0% |
| TTGATTCAACCGGTATCAAA+TGG | + | tig0023052:20375-20394 | Msa1404230:CDS | 35.0% | |
| ATGGTTGTATGAAGCTGATT+AGG | + | tig0023052:20430-20449 | Msa1404230:CDS | 35.0% | |
| TGGTTGTATGAAGCTGATTA+GGG | + | tig0023052:20431-20450 | Msa1404230:CDS | 35.0% | |
| ! | AGATTTTGCAGCAGTTTGAT+TGG | + | tig0023052:20535-20554 | Msa1404230:CDS | 35.0% |
| ATTGTACCTGGTGGAAATTT+AGG | + | tig0023052:20576-20595 | Msa1404230:CDS | 35.0% | |
| TTGTACCTGGTGGAAATTTA+GGG | + | tig0023052:20577-20596 | Msa1404230:CDS | 35.0% | |
| ATATTCCCTAAATTTCCACC+AGG | - | tig0023052:20585-20604 | None:intergenic | 35.0% | |
| TTTGCTTCTGCTATTCAGAT+TGG | + | tig0023052:20762-20781 | Msa1404230:CDS | 35.0% | |
| ACAGCTCTATCAATTGAAAC+AGG | - | tig0023052:20792-20811 | None:intergenic | 35.0% | |
| ! | TATCATTCTGGGAATATTGC+TGG | + | tig0023052:21038-21057 | Msa1404230:CDS | 35.0% |
| !! | TTTAGGAGCGTTAAAAACGA+TGG | - | tig0023052:19674-19693 | None:intergenic | 35.0% |
| TGTATGGAGCAAAAAGGAAT+GGG | + | tig0023052:20023-20042 | Msa1404230:CDS | 35.0% | |
| ! | TTGAGATTTTATTCGCTGGT+AGG | - | tig0023052:20347-20366 | None:intergenic | 35.0% |
| TTGATTCAACCGGTATCAAA+TGG | + | tig0023052:20375-20394 | Msa1404230:CDS | 35.0% | |
| ATGGTTGTATGAAGCTGATT+AGG | + | tig0023052:20430-20449 | Msa1404230:CDS | 35.0% | |
| TGGTTGTATGAAGCTGATTA+GGG | + | tig0023052:20431-20450 | Msa1404230:CDS | 35.0% | |
| ! | AGATTTTGCAGCAGTTTGAT+TGG | + | tig0023052:20535-20554 | Msa1404230:CDS | 35.0% |
| ATTGTACCTGGTGGAAATTT+AGG | + | tig0023052:20576-20595 | Msa1404230:CDS | 35.0% | |
| TTGTACCTGGTGGAAATTTA+GGG | + | tig0023052:20577-20596 | Msa1404230:CDS | 35.0% | |
| ATATTCCCTAAATTTCCACC+AGG | - | tig0023052:20585-20604 | None:intergenic | 35.0% | |
| TTTGCTTCTGCTATTCAGAT+TGG | + | tig0023052:20762-20781 | Msa1404230:CDS | 35.0% | |
| ACAGCTCTATCAATTGAAAC+AGG | - | tig0023052:20792-20811 | None:intergenic | 35.0% | |
| ! | TATCATTCTGGGAATATTGC+TGG | + | tig0023052:21038-21057 | Msa1404230:CDS | 35.0% |
| !! | AAAACGATGGTGGAGAATGA+AGG | - | tig0023052:19661-19680 | None:intergenic | 40.0% |
| TTCAGGTGTATGGAGCAAAA+AGG | + | tig0023052:20017-20036 | Msa1404230:CDS | 40.0% | |
| GTGTATGGAGCAAAAAGGAA+TGG | + | tig0023052:20022-20041 | Msa1404230:CDS | 40.0% | |
| ! | ATATCATCAGGGTGGATTTC+TGG | - | tig0023052:20054-20073 | None:intergenic | 40.0% |
| AAGCGCTAACGATATCATCA+GGG | - | tig0023052:20065-20084 | None:intergenic | 40.0% | |
| ! | AAAGCGCTAACGATATCATC+AGG | - | tig0023052:20066-20085 | None:intergenic | 40.0% |
| ! | GATATCGTTAGCGCTTTTGA+AGG | + | tig0023052:20069-20088 | Msa1404230:CDS | 40.0% |
| !! | CGTTTTGGCAAACAGTTTGT+AGG | + | tig0023052:20117-20136 | Msa1404230:CDS | 40.0% |
| TTGTAGGCATGAACGATCTT+TGG | + | tig0023052:20133-20152 | Msa1404230:CDS | 40.0% | |
| TGTAGGCATGAACGATCTTT+GGG | + | tig0023052:20134-20153 | Msa1404230:CDS | 40.0% | |
| ! | GATCTTTGGGTTAAACACTG+TGG | + | tig0023052:20147-20166 | Msa1404230:CDS | 40.0% |
| !! | GATCTTTGAAGCTTCCAGTA+TGG | - | tig0023052:20179-20198 | None:intergenic | 40.0% |
| ACTGGAAGCTTCAAAGATCT+TGG | + | tig0023052:20180-20199 | Msa1404230:CDS | 40.0% | |
| ! | AATGACTGTGCTTGTTAGTC+AGG | + | tig0023052:20203-20222 | Msa1404230:CDS | 40.0% |
| ACCAATGCACCATTTGATAC+CGG | - | tig0023052:20387-20406 | None:intergenic | 40.0% | |
| !! | GGCTTGTTGATAAGATACCA+AGG | + | tig0023052:20646-20665 | Msa1404230:CDS | 40.0% |
| ! | TGTTGATAAGATACCAAGGC+TGG | + | tig0023052:20650-20669 | Msa1404230:CDS | 40.0% |
| GAATTCTGATGGGATTGTTG+AGG | + | tig0023052:20824-20843 | Msa1404230:CDS | 40.0% | |
| ATCCATCAATTCCTCTTCAC+TGG | - | tig0023052:20853-20872 | None:intergenic | 40.0% | |
| ! | AGAGGAATTGATGGATGCAA+TGG | + | tig0023052:20857-20876 | Msa1404230:CDS | 40.0% |
| TATTTGTCCTCATACTGGTG+TGG | + | tig0023052:20905-20924 | Msa1404230:CDS | 40.0% | |
| ! | CTCAGGAATAATGGGGTTAT+TGG | + | tig0023052:20948-20967 | Msa1404230:CDS | 40.0% |
| TCTGGGAATATTGCTGGTAT+TGG | + | tig0023052:21044-21063 | Msa1404230:CDS | 40.0% | |
| TAATCCACCTGTGTCTGTTA+AGG | + | tig0023052:21076-21095 | Msa1404230:CDS | 40.0% | |
| AAATCAGCCTTAACAGACAC+AGG | - | tig0023052:21086-21105 | None:intergenic | 40.0% | |
| !! | GTGTCTGTTAAGGCTGATTT+TGG | + | tig0023052:21086-21105 | Msa1404230:CDS | 40.0% |
| !!! | GGCTGATTTTGGTTCTGTTA+TGG | + | tig0023052:21097-21116 | Msa1404230:CDS | 40.0% |
| !! | AAAACGATGGTGGAGAATGA+AGG | - | tig0023052:19661-19680 | None:intergenic | 40.0% |
| TTCAGGTGTATGGAGCAAAA+AGG | + | tig0023052:20017-20036 | Msa1404230:CDS | 40.0% | |
| GTGTATGGAGCAAAAAGGAA+TGG | + | tig0023052:20022-20041 | Msa1404230:CDS | 40.0% | |
| ! | ATATCATCAGGGTGGATTTC+TGG | - | tig0023052:20054-20073 | None:intergenic | 40.0% |
| AAGCGCTAACGATATCATCA+GGG | - | tig0023052:20065-20084 | None:intergenic | 40.0% | |
| ! | AAAGCGCTAACGATATCATC+AGG | - | tig0023052:20066-20085 | None:intergenic | 40.0% |
| ! | GATATCGTTAGCGCTTTTGA+AGG | + | tig0023052:20069-20088 | Msa1404230:CDS | 40.0% |
| !! | CGTTTTGGCAAACAGTTTGT+AGG | + | tig0023052:20117-20136 | Msa1404230:CDS | 40.0% |
| TTGTAGGCATGAACGATCTT+TGG | + | tig0023052:20133-20152 | Msa1404230:CDS | 40.0% | |
| TGTAGGCATGAACGATCTTT+GGG | + | tig0023052:20134-20153 | Msa1404230:CDS | 40.0% | |
| ! | GATCTTTGGGTTAAACACTG+TGG | + | tig0023052:20147-20166 | Msa1404230:CDS | 40.0% |
| !! | GATCTTTGAAGCTTCCAGTA+TGG | - | tig0023052:20179-20198 | None:intergenic | 40.0% |
| ACTGGAAGCTTCAAAGATCT+TGG | + | tig0023052:20180-20199 | Msa1404230:CDS | 40.0% | |
| ! | AATGACTGTGCTTGTTAGTC+AGG | + | tig0023052:20203-20222 | Msa1404230:CDS | 40.0% |
| ACCAATGCACCATTTGATAC+CGG | - | tig0023052:20387-20406 | None:intergenic | 40.0% | |
| !! | GGCTTGTTGATAAGATACCA+AGG | + | tig0023052:20646-20665 | Msa1404230:CDS | 40.0% |
| ! | TGTTGATAAGATACCAAGGC+TGG | + | tig0023052:20650-20669 | Msa1404230:CDS | 40.0% |
| GAATTCTGATGGGATTGTTG+AGG | + | tig0023052:20824-20843 | Msa1404230:CDS | 40.0% | |
| ATCCATCAATTCCTCTTCAC+TGG | - | tig0023052:20853-20872 | None:intergenic | 40.0% | |
| ! | AGAGGAATTGATGGATGCAA+TGG | + | tig0023052:20857-20876 | Msa1404230:CDS | 40.0% |
| TATTTGTCCTCATACTGGTG+TGG | + | tig0023052:20905-20924 | Msa1404230:CDS | 40.0% | |
| ! | CTCAGGAATAATGGGGTTAT+TGG | + | tig0023052:20948-20967 | Msa1404230:CDS | 40.0% |
| TCTGGGAATATTGCTGGTAT+TGG | + | tig0023052:21044-21063 | Msa1404230:CDS | 40.0% | |
| TAATCCACCTGTGTCTGTTA+AGG | + | tig0023052:21076-21095 | Msa1404230:CDS | 40.0% | |
| AAATCAGCCTTAACAGACAC+AGG | - | tig0023052:21086-21105 | None:intergenic | 40.0% | |
| !! | GTGTCTGTTAAGGCTGATTT+TGG | + | tig0023052:21086-21105 | Msa1404230:CDS | 40.0% |
| !!! | GGCTGATTTTGGTTCTGTTA+TGG | + | tig0023052:21097-21116 | Msa1404230:CDS | 40.0% |
| !! | AGGAGCGTTAAAAACGATGG+TGG | - | tig0023052:19671-19690 | None:intergenic | 45.0% |
| GATGTCTTTGATGTTGTCGG+TGG | - | tig0023052:19770-19789 | None:intergenic | 45.0% | |
| GGCGATGTCTTTGATGTTGT+CGG | - | tig0023052:19773-19792 | None:intergenic | 45.0% | |
| GTATTTGGCGGTGAAGTTGT+TGG | - | tig0023052:19815-19834 | None:intergenic | 45.0% | |
| GTTGAATGGGACGTATTTGG+CGG | - | tig0023052:19827-19846 | None:intergenic | 45.0% | |
| GGAGTTGAATGGGACGTATT+TGG | - | tig0023052:19830-19849 | None:intergenic | 45.0% | |
| AGTCGAAGGTGGAGTTGAAT+GGG | - | tig0023052:19840-19859 | None:intergenic | 45.0% | |
| ! | CTTTTCTGGGCTGAACGTTT+TGG | + | tig0023052:20102-20121 | Msa1404230:CDS | 45.0% |
| CACTGTGGTAATAGCCATAC+TGG | + | tig0023052:20162-20181 | Msa1404230:CDS | 45.0% | |
| TTAGTCAGGTAAATCGCCTC+CGG | + | tig0023052:20217-20236 | Msa1404230:CDS | 45.0% | |
| AAAATGAACCGTCCGTTGGT+CGG | + | tig0023052:20240-20259 | Msa1404230:CDS | 45.0% | |
| GCTGGTAGGAAAACAATCGA+AGG | - | tig0023052:20333-20352 | None:intergenic | 45.0% | |
| ! | GCGGTTGAGATTTTATTCGC+TGG | - | tig0023052:20351-20370 | None:intergenic | 45.0% |
| ACCGGTATCAAATGGTGCAT+TGG | + | tig0023052:20383-20402 | Msa1404230:CDS | 45.0% | |
| TTTGCAGCAGTTTGATTGGC+AGG | + | tig0023052:20539-20558 | Msa1404230:CDS | 45.0% | |
| TTGATTGGCAGGTACCTGAT+TGG | + | tig0023052:20550-20569 | Msa1404230:CDS | 45.0% | |
| TGATTGGCAGGTACCTGATT+GGG | + | tig0023052:20551-20570 | Msa1404230:CDS | 45.0% | |
| AGCCAGTGAAGAGGAATTGA+TGG | + | tig0023052:20848-20867 | Msa1404230:CDS | 45.0% | |
| !! | ATGGCACTTGCTGATTCAAC+TGG | + | tig0023052:20876-20895 | Msa1404230:CDS | 45.0% |
| GTTAAAGCCACACCAGTATG+AGG | - | tig0023052:20915-20934 | None:intergenic | 45.0% | |
| GTGGTTGTTAGTACTGCTCA+TGG | + | tig0023052:20987-21006 | Msa1404230:CDS | 45.0% | |
| !! | AGGAGCGTTAAAAACGATGG+TGG | - | tig0023052:19671-19690 | None:intergenic | 45.0% |
| GATGTCTTTGATGTTGTCGG+TGG | - | tig0023052:19770-19789 | None:intergenic | 45.0% | |
| GGCGATGTCTTTGATGTTGT+CGG | - | tig0023052:19773-19792 | None:intergenic | 45.0% | |
| GTATTTGGCGGTGAAGTTGT+TGG | - | tig0023052:19815-19834 | None:intergenic | 45.0% | |
| GTTGAATGGGACGTATTTGG+CGG | - | tig0023052:19827-19846 | None:intergenic | 45.0% | |
| GGAGTTGAATGGGACGTATT+TGG | - | tig0023052:19830-19849 | None:intergenic | 45.0% | |
| AGTCGAAGGTGGAGTTGAAT+GGG | - | tig0023052:19840-19859 | None:intergenic | 45.0% | |
| ! | CTTTTCTGGGCTGAACGTTT+TGG | + | tig0023052:20102-20121 | Msa1404230:CDS | 45.0% |
| CACTGTGGTAATAGCCATAC+TGG | + | tig0023052:20162-20181 | Msa1404230:CDS | 45.0% | |
| TTAGTCAGGTAAATCGCCTC+CGG | + | tig0023052:20217-20236 | Msa1404230:CDS | 45.0% | |
| AAAATGAACCGTCCGTTGGT+CGG | + | tig0023052:20240-20259 | Msa1404230:CDS | 45.0% | |
| GCTGGTAGGAAAACAATCGA+AGG | - | tig0023052:20333-20352 | None:intergenic | 45.0% | |
| ! | GCGGTTGAGATTTTATTCGC+TGG | - | tig0023052:20351-20370 | None:intergenic | 45.0% |
| ACCGGTATCAAATGGTGCAT+TGG | + | tig0023052:20383-20402 | Msa1404230:CDS | 45.0% | |
| TTTGCAGCAGTTTGATTGGC+AGG | + | tig0023052:20539-20558 | Msa1404230:CDS | 45.0% | |
| TTGATTGGCAGGTACCTGAT+TGG | + | tig0023052:20550-20569 | Msa1404230:CDS | 45.0% | |
| TGATTGGCAGGTACCTGATT+GGG | + | tig0023052:20551-20570 | Msa1404230:CDS | 45.0% | |
| AGCCAGTGAAGAGGAATTGA+TGG | + | tig0023052:20848-20867 | Msa1404230:CDS | 45.0% | |
| !! | ATGGCACTTGCTGATTCAAC+TGG | + | tig0023052:20876-20895 | Msa1404230:CDS | 45.0% |
| GTTAAAGCCACACCAGTATG+AGG | - | tig0023052:20915-20934 | None:intergenic | 45.0% | |
| GTGGTTGTTAGTACTGCTCA+TGG | + | tig0023052:20987-21006 | Msa1404230:CDS | 45.0% | |
| !! | AGAGTGGTTGTTGGTGGTAG+CGG | - | tig0023052:19731-19750 | None:intergenic | 50.0% |
| TGATGGAGAGTGGTTGTTGG+TGG | - | tig0023052:19737-19756 | None:intergenic | 50.0% | |
| CAACAACCACTCTCCATCAC+CGG | + | tig0023052:19738-19757 | Msa1404230:CDS | 50.0% | |
| TTTGGCGGTGAAGTTGTTGG+CGG | - | tig0023052:19812-19831 | None:intergenic | 50.0% | |
| GAGTCGAAGGTGGAGTTGAA+TGG | - | tig0023052:19841-19860 | None:intergenic | 50.0% | |
| !! | GGGAAAACCACTTGGCCTTA+CGG | + | tig0023052:19994-20013 | Msa1404230:CDS | 50.0% |
| CTCCATACACCTGAACCGTA+AGG | - | tig0023052:20012-20031 | None:intergenic | 50.0% | |
| !! | CATCAGGGTGGATTTCTGGT+AGG | - | tig0023052:20050-20069 | None:intergenic | 50.0% |
| CGCTAACGATATCATCAGGG+TGG | - | tig0023052:20062-20081 | None:intergenic | 50.0% | |
| ! | CCAACGGACGGTTCATTTTC+CGG | - | tig0023052:20239-20258 | None:intergenic | 50.0% |
| TGCTTCCACCGGTGATACAT+CGG | + | tig0023052:20272-20291 | Msa1404230:CDS | 50.0% | |
| TCTGCTTATTGCGCTTCAGC+TGG | + | tig0023052:20303-20322 | Msa1404230:CDS | 50.0% | |
| ! | AACCGCGCAGTTGATTCAAC+CGG | + | tig0023052:20365-20384 | Msa1404230:CDS | 50.0% |
| ! | TACCGGTTGAATCAACTGCG+CGG | - | tig0023052:20370-20389 | None:intergenic | 50.0% |
| CCAGGTACAATCACCCAATC+AGG | - | tig0023052:20567-20586 | None:intergenic | 50.0% | |
| CCTGATTGGGTGATTGTACC+TGG | + | tig0023052:20564-20583 | Msa1404230:CDS | 50.0% | |
| GATTGGGTGATTGTACCTGG+TGG | + | tig0023052:20567-20586 | Msa1404230:CDS | 50.0% | |
| TGTTGAGGAAGCCAGTGAAG+AGG | + | tig0023052:20839-20858 | Msa1404230:CDS | 50.0% | |
| GGTTATTGGAGCCAGTGAGA+GGG | + | tig0023052:20962-20981 | Msa1404230:CDS | 50.0% | |
| AACAACCACAACCCTCTCAC+TGG | - | tig0023052:20976-20995 | None:intergenic | 50.0% | |
| TCAGCCTTAACAGACACAGG+TGG | - | tig0023052:21083-21102 | None:intergenic | 50.0% | |
| !! | AGAGTGGTTGTTGGTGGTAG+CGG | - | tig0023052:19731-19750 | None:intergenic | 50.0% |
| TGATGGAGAGTGGTTGTTGG+TGG | - | tig0023052:19737-19756 | None:intergenic | 50.0% | |
| CAACAACCACTCTCCATCAC+CGG | + | tig0023052:19738-19757 | Msa1404230:CDS | 50.0% | |
| TTTGGCGGTGAAGTTGTTGG+CGG | - | tig0023052:19812-19831 | None:intergenic | 50.0% | |
| GAGTCGAAGGTGGAGTTGAA+TGG | - | tig0023052:19841-19860 | None:intergenic | 50.0% | |
| !! | GGGAAAACCACTTGGCCTTA+CGG | + | tig0023052:19994-20013 | Msa1404230:CDS | 50.0% |
| CTCCATACACCTGAACCGTA+AGG | - | tig0023052:20012-20031 | None:intergenic | 50.0% | |
| !! | CATCAGGGTGGATTTCTGGT+AGG | - | tig0023052:20050-20069 | None:intergenic | 50.0% |
| CGCTAACGATATCATCAGGG+TGG | - | tig0023052:20062-20081 | None:intergenic | 50.0% | |
| ! | CCAACGGACGGTTCATTTTC+CGG | - | tig0023052:20239-20258 | None:intergenic | 50.0% |
| TGCTTCCACCGGTGATACAT+CGG | + | tig0023052:20272-20291 | Msa1404230:CDS | 50.0% | |
| TCTGCTTATTGCGCTTCAGC+TGG | + | tig0023052:20303-20322 | Msa1404230:CDS | 50.0% | |
| ! | AACCGCGCAGTTGATTCAAC+CGG | + | tig0023052:20365-20384 | Msa1404230:CDS | 50.0% |
| ! | TACCGGTTGAATCAACTGCG+CGG | - | tig0023052:20370-20389 | None:intergenic | 50.0% |
| CCAGGTACAATCACCCAATC+AGG | - | tig0023052:20567-20586 | None:intergenic | 50.0% | |
| CCTGATTGGGTGATTGTACC+TGG | + | tig0023052:20564-20583 | Msa1404230:CDS | 50.0% | |
| GATTGGGTGATTGTACCTGG+TGG | + | tig0023052:20567-20586 | Msa1404230:CDS | 50.0% | |
| TGTTGAGGAAGCCAGTGAAG+AGG | + | tig0023052:20839-20858 | Msa1404230:CDS | 50.0% | |
| GGTTATTGGAGCCAGTGAGA+GGG | + | tig0023052:20962-20981 | Msa1404230:CDS | 50.0% | |
| AACAACCACAACCCTCTCAC+TGG | - | tig0023052:20976-20995 | None:intergenic | 50.0% | |
| TCAGCCTTAACAGACACAGG+TGG | - | tig0023052:21083-21102 | None:intergenic | 50.0% | |
| CGGCGGTTATGTGTGGGTTT+AGG | - | tig0023052:19691-19710 | None:intergenic | 55.0% | |
| AGTGTGCGGCGGTTATGTGT+GGG | - | tig0023052:19697-19716 | None:intergenic | 55.0% | |
| !! | CGGTGATGGAGAGTGGTTGT+TGG | - | tig0023052:19740-19759 | None:intergenic | 55.0% |
| ATGTTGTCGGTGGCGAGATC+CGG | - | tig0023052:19760-19779 | None:intergenic | 55.0% | |
| TGAAGTTGTTGGCGGTGGCA+GGG | - | tig0023052:19804-19823 | None:intergenic | 55.0% | |
| GTAGGATTCAGGGGAGTCGA+AGG | - | tig0023052:19854-19873 | None:intergenic | 55.0% | |
| GTCGAGGGAGTAGGATTCAG+GGG | - | tig0023052:19863-19882 | None:intergenic | 55.0% | |
| CGTCGAGGGAGTAGGATTCA+GGG | - | tig0023052:19864-19883 | None:intergenic | 55.0% | |
| TCGTCGAGGGAGTAGGATTC+AGG | - | tig0023052:19865-19884 | None:intergenic | 55.0% | |
| GACGATTTCGTCGAGGGAGT+AGG | - | tig0023052:19872-19891 | None:intergenic | 55.0% | |
| GCGGTAGACGATTTCGTCGA+GGG | - | tig0023052:19878-19897 | None:intergenic | 55.0% | |
| TGCGGTAGACGATTTCGTCG+AGG | - | tig0023052:19879-19898 | None:intergenic | 55.0% | |
| ATCGTCTACCGCAGCAACTC+CGG | + | tig0023052:19886-19905 | Msa1404230:CDS | 55.0% | |
| !! | TGTCATGGTGGACGTCGAGA+AGG | - | tig0023052:19915-19934 | None:intergenic | 55.0% |
| CGAGTGCTTCGATGTCATGG+TGG | - | tig0023052:19927-19946 | None:intergenic | 55.0% | |
| TCGCGAGTGCTTCGATGTCA+TGG | - | tig0023052:19930-19949 | None:intergenic | 55.0% | |
| ! | GAAGCACTCGCGAAGTTCGA+CGG | + | tig0023052:19937-19956 | Msa1404230:CDS | 55.0% |
| ! | AACCTCTTCGACTCGCGTGT+GGG | + | tig0023052:19973-19992 | Msa1404230:CDS | 55.0% |
| !! | ACCACTTGGCCTTACGGTTC+AGG | + | tig0023052:20000-20019 | Msa1404230:CDS | 55.0% |
| ACCTGAACCGTAAGGCCAAG+TGG | - | tig0023052:20004-20023 | None:intergenic | 55.0% | |
| GGCCTTACGGTTCAGGTGTA+TGG | + | tig0023052:20007-20026 | Msa1404230:CDS | 55.0% | |
| ! | ACGGACGGTTCATTTTCCGG+AGG | - | tig0023052:20236-20255 | None:intergenic | 55.0% |
| CCGGAAAATGAACCGTCCGT+TGG | + | tig0023052:20236-20255 | Msa1404230:CDS | 55.0% | |
| AACCAACTCCGACCAACGGA+CGG | - | tig0023052:20251-20270 | None:intergenic | 55.0% | |
| GCACAACCAACTCCGACCAA+CGG | - | tig0023052:20255-20274 | None:intergenic | 55.0% | |
| ! | GGAGTTGGTTGTGCTTCCAC+CGG | + | tig0023052:20261-20280 | Msa1404230:CDS | 55.0% |
| GCTTGTGCACAAACCAGCCT+TGG | - | tig0023052:20666-20685 | None:intergenic | 55.0% | |
| GGGTTATTGGAGCCAGTGAG+AGG | + | tig0023052:20961-20980 | Msa1404230:CDS | 55.0% | |
| CGGCGGTTATGTGTGGGTTT+AGG | - | tig0023052:19691-19710 | None:intergenic | 55.0% | |
| AGTGTGCGGCGGTTATGTGT+GGG | - | tig0023052:19697-19716 | None:intergenic | 55.0% | |
| !! | CGGTGATGGAGAGTGGTTGT+TGG | - | tig0023052:19740-19759 | None:intergenic | 55.0% |
| ATGTTGTCGGTGGCGAGATC+CGG | - | tig0023052:19760-19779 | None:intergenic | 55.0% | |
| TGAAGTTGTTGGCGGTGGCA+GGG | - | tig0023052:19804-19823 | None:intergenic | 55.0% | |
| GTAGGATTCAGGGGAGTCGA+AGG | - | tig0023052:19854-19873 | None:intergenic | 55.0% | |
| GTCGAGGGAGTAGGATTCAG+GGG | - | tig0023052:19863-19882 | None:intergenic | 55.0% | |
| CGTCGAGGGAGTAGGATTCA+GGG | - | tig0023052:19864-19883 | None:intergenic | 55.0% | |
| TCGTCGAGGGAGTAGGATTC+AGG | - | tig0023052:19865-19884 | None:intergenic | 55.0% | |
| GACGATTTCGTCGAGGGAGT+AGG | - | tig0023052:19872-19891 | None:intergenic | 55.0% | |
| GCGGTAGACGATTTCGTCGA+GGG | - | tig0023052:19878-19897 | None:intergenic | 55.0% | |
| TGCGGTAGACGATTTCGTCG+AGG | - | tig0023052:19879-19898 | None:intergenic | 55.0% | |
| ATCGTCTACCGCAGCAACTC+CGG | + | tig0023052:19886-19905 | Msa1404230:CDS | 55.0% | |
| !! | TGTCATGGTGGACGTCGAGA+AGG | - | tig0023052:19915-19934 | None:intergenic | 55.0% |
| CGAGTGCTTCGATGTCATGG+TGG | - | tig0023052:19927-19946 | None:intergenic | 55.0% | |
| TCGCGAGTGCTTCGATGTCA+TGG | - | tig0023052:19930-19949 | None:intergenic | 55.0% | |
| ! | GAAGCACTCGCGAAGTTCGA+CGG | + | tig0023052:19937-19956 | Msa1404230:CDS | 55.0% |
| ! | AACCTCTTCGACTCGCGTGT+GGG | + | tig0023052:19973-19992 | Msa1404230:CDS | 55.0% |
| !! | ACCACTTGGCCTTACGGTTC+AGG | + | tig0023052:20000-20019 | Msa1404230:CDS | 55.0% |
| ACCTGAACCGTAAGGCCAAG+TGG | - | tig0023052:20004-20023 | None:intergenic | 55.0% | |
| GGCCTTACGGTTCAGGTGTA+TGG | + | tig0023052:20007-20026 | Msa1404230:CDS | 55.0% | |
| ! | ACGGACGGTTCATTTTCCGG+AGG | - | tig0023052:20236-20255 | None:intergenic | 55.0% |
| CCGGAAAATGAACCGTCCGT+TGG | + | tig0023052:20236-20255 | Msa1404230:CDS | 55.0% | |
| AACCAACTCCGACCAACGGA+CGG | - | tig0023052:20251-20270 | None:intergenic | 55.0% | |
| GCACAACCAACTCCGACCAA+CGG | - | tig0023052:20255-20274 | None:intergenic | 55.0% | |
| ! | GGAGTTGGTTGTGCTTCCAC+CGG | + | tig0023052:20261-20280 | Msa1404230:CDS | 55.0% |
| GCTTGTGCACAAACCAGCCT+TGG | - | tig0023052:20666-20685 | None:intergenic | 55.0% | |
| GGGTTATTGGAGCCAGTGAG+AGG | + | tig0023052:20961-20980 | Msa1404230:CDS | 55.0% | |
| GAGTGTGCGGCGGTTATGTG+TGG | - | tig0023052:19698-19717 | None:intergenic | 60.0% | |
| !! | GTGGTTGTTGGTGGTAGCGG+TGG | - | tig0023052:19728-19747 | None:intergenic | 60.0% |
| !! | CGAGATCCGGTGATGGAGAG+TGG | - | tig0023052:19747-19766 | None:intergenic | 60.0% |
| GTGAAGTTGTTGGCGGTGGC+AGG | - | tig0023052:19805-19824 | None:intergenic | 60.0% | |
| GGATTCAGGGGAGTCGAAGG+TGG | - | tig0023052:19851-19870 | None:intergenic | 60.0% | |
| ! | CAACCTCTTCGACTCGCGTG+TGG | + | tig0023052:19972-19991 | Msa1404230:CDS | 60.0% |
| ! | ACCTCTTCGACTCGCGTGTG+GGG | + | tig0023052:19974-19993 | Msa1404230:CDS | 60.0% |
| CGCGTGTGGGGAAAACCACT+TGG | + | tig0023052:19986-20005 | Msa1404230:CDS | 60.0% | |
| AACCGTCCGTTGGTCGGAGT+TGG | + | tig0023052:20246-20265 | Msa1404230:CDS | 60.0% | |
| CAGCGCAGCCGATGTATCAC+CGG | - | tig0023052:20283-20302 | None:intergenic | 60.0% | |
| TGGAGCCAGTGAGAGGGTTG+TGG | + | tig0023052:20968-20987 | Msa1404230:CDS | 60.0% | |
| GAGTGTGCGGCGGTTATGTG+TGG | - | tig0023052:19698-19717 | None:intergenic | 60.0% | |
| !! | GTGGTTGTTGGTGGTAGCGG+TGG | - | tig0023052:19728-19747 | None:intergenic | 60.0% |
| !! | CGAGATCCGGTGATGGAGAG+TGG | - | tig0023052:19747-19766 | None:intergenic | 60.0% |
| GTGAAGTTGTTGGCGGTGGC+AGG | - | tig0023052:19805-19824 | None:intergenic | 60.0% | |
| GGATTCAGGGGAGTCGAAGG+TGG | - | tig0023052:19851-19870 | None:intergenic | 60.0% | |
| ! | CAACCTCTTCGACTCGCGTG+TGG | + | tig0023052:19972-19991 | Msa1404230:CDS | 60.0% |
| ! | ACCTCTTCGACTCGCGTGTG+GGG | + | tig0023052:19974-19993 | Msa1404230:CDS | 60.0% |
| CGCGTGTGGGGAAAACCACT+TGG | + | tig0023052:19986-20005 | Msa1404230:CDS | 60.0% | |
| AACCGTCCGTTGGTCGGAGT+TGG | + | tig0023052:20246-20265 | Msa1404230:CDS | 60.0% | |
| CAGCGCAGCCGATGTATCAC+CGG | - | tig0023052:20283-20302 | None:intergenic | 60.0% | |
| TGGAGCCAGTGAGAGGGTTG+TGG | + | tig0023052:20968-20987 | Msa1404230:CDS | 60.0% | |
| !! | GTTGGTGGTAGCGGTGGCGA+CGG | - | tig0023052:19722-19741 | None:intergenic | 65.0% |
| TCGGTGGCGAGATCCGGTGA+TGG | - | tig0023052:19754-19773 | None:intergenic | 65.0% | |
| TGTTGGCGGTGGCAGGGTGA+CGG | - | tig0023052:19798-19817 | None:intergenic | 65.0% | |
| GGCGGTGAAGTTGTTGGCGG+TGG | - | tig0023052:19809-19828 | None:intergenic | 65.0% | |
| GTCTACCGCAGCAACTCCGG+CGG | + | tig0023052:19889-19908 | Msa1404230:CDS | 65.0% | |
| CGAAGTTCGACGGCGCGTAC+TGG | + | tig0023052:19947-19966 | Msa1404230:CDS | 65.0% | |
| TCCCCACACGCGAGTCGAAG+AGG | - | tig0023052:19978-19997 | None:intergenic | 65.0% | |
| CGCAGCCGATGTATCACCGG+TGG | - | tig0023052:20280-20299 | None:intergenic | 65.0% | |
| !! | GTTGGTGGTAGCGGTGGCGA+CGG | - | tig0023052:19722-19741 | None:intergenic | 65.0% |
| TCGGTGGCGAGATCCGGTGA+TGG | - | tig0023052:19754-19773 | None:intergenic | 65.0% | |
| TGTTGGCGGTGGCAGGGTGA+CGG | - | tig0023052:19798-19817 | None:intergenic | 65.0% | |
| GGCGGTGAAGTTGTTGGCGG+TGG | - | tig0023052:19809-19828 | None:intergenic | 65.0% | |
| GTCTACCGCAGCAACTCCGG+CGG | + | tig0023052:19889-19908 | Msa1404230:CDS | 65.0% | |
| CGAAGTTCGACGGCGCGTAC+TGG | + | tig0023052:19947-19966 | Msa1404230:CDS | 65.0% | |
| TCCCCACACGCGAGTCGAAG+AGG | - | tig0023052:19978-19997 | None:intergenic | 65.0% | |
| CGCAGCCGATGTATCACCGG+TGG | - | tig0023052:20280-20299 | None:intergenic | 65.0% | |
| TGGCGACGGTGAGTGTGCGG+CGG | - | tig0023052:19708-19727 | None:intergenic | 70.0% | |
| CGGTGGCGACGGTGAGTGTG+CGG | - | tig0023052:19711-19730 | None:intergenic | 70.0% | |
| GAAGGCCGCCGGAGTTGCTG+CGG | - | tig0023052:19897-19916 | None:intergenic | 70.0% | |
| GTGGACGTCGAGAAGGCCGC+CGG | - | tig0023052:19908-19927 | None:intergenic | 70.0% | |
| TGGCGACGGTGAGTGTGCGG+CGG | - | tig0023052:19708-19727 | None:intergenic | 70.0% | |
| CGGTGGCGACGGTGAGTGTG+CGG | - | tig0023052:19711-19730 | None:intergenic | 70.0% | |
| GAAGGCCGCCGGAGTTGCTG+CGG | - | tig0023052:19897-19916 | None:intergenic | 70.0% | |
| GTGGACGTCGAGAAGGCCGC+CGG | - | tig0023052:19908-19927 | None:intergenic | 70.0% | |
| ! | TGGCGGTGGCAGGGTGACGG+CGG | - | tig0023052:19795-19814 | None:intergenic | 75.0% |
| ! | TGGCGGTGGCAGGGTGACGG+CGG | - | tig0023052:19795-19814 | None:intergenic | 75.0% |
| !! | GGCGGTGGCAGGGTGACGGC+GGG | - | tig0023052:19794-19813 | None:intergenic | 80.0% |
| !! | GGCGGTGGCAGGGTGACGGC+GGG | - | tig0023052:19794-19813 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023052 | gene | 19634 | 21160 | 19634 | ID=Msa1404230;Name=Msa1404230 |
| tig0023052 | mRNA | 19634 | 21160 | 19634 | ID=Msa1404230-mRNA-1;Parent=Msa1404230;Name=Msa1404230-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|508 |
| tig0023052 | exon | 19634 | 21160 | 19634 | ID=Msa1404230-mRNA-1:exon:19681;Parent=Msa1404230-mRNA-1 |
| tig0023052 | CDS | 19634 | 21160 | 19634 | ID=Msa1404230-mRNA-1:cds;Parent=Msa1404230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
