Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414380 | sp|Q8H103|G6PIP_ARATH | 81.199 | 617 | 107 | 4 | 1 | 612 | 1 | 613 | 0.0 | 1044 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414380 | G7KBI3 | 98.055 | 617 | 7 | 2 | 1 | 612 | 1 | 617 | 0.0 | 1246 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1404230 | Msa1414380 | 0.800908 | 1.155959e-48 | -8.615850e-47 |
| Msa0810950 | Msa1414380 | 0.982631 | 1.364736e-155 | -8.615850e-47 |
| Msa0827700 | Msa1414380 | 0.990034 | 9.364653e-181 | -8.615850e-47 |
| Msa0851150 | Msa1414380 | 0.819296 | 1.251488e-52 | -8.615850e-47 |
| Msa0902370 | Msa1414380 | 0.986826 | 4.196414e-168 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414380 | MtrunA17_Chr5g0427231 | 98.055 | 617 | 7 | 2 | 1 | 612 | 1 | 617 | 0.0 | 1246 |
| Msa1414380 | MtrunA17_Chr6g0452201 | 27.812 | 489 | 291 | 15 | 92 | 531 | 47 | 522 | 1.90e-34 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414380 | AT4G24620.1 | 81.199 | 617 | 107 | 4 | 1 | 612 | 1 | 613 | 0.0 | 1044 |
| Msa1414380 | AT4G24620.2 | 80.803 | 573 | 101 | 4 | 1 | 568 | 1 | 569 | 0.0 | 960 |
| Msa1414380 | AT5G42740.1 | 29.796 | 490 | 280 | 16 | 92 | 531 | 48 | 523 | 1.89e-36 | 144 |
| Msa1414380 | AT5G42740.2 | 29.796 | 490 | 280 | 16 | 92 | 531 | 48 | 523 | 1.89e-36 | 144 |
| Msa1414380 | AT5G42740.3 | 29.796 | 490 | 280 | 16 | 92 | 531 | 16 | 491 | 2.25e-36 | 143 |
Find 198 sgRNAs with CRISPR-Local
Find 728 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTTGGAATAAACTATTT+TGG | 0.185192 | tig0024115:+10718 | Msa1414380:three_prime_UTR |
| ACCTGAGATTAAACCTGTTT+TGG | 0.204083 | tig0024115:-4527 | Msa1414380:intergenic |
| TACTGGCTTTATCTTGGTAT+TGG | 0.226227 | tig0024115:+7005 | Msa1414380:CDS |
| GGAAATGGAGCCGAGGTTTC+AGG | 0.226695 | tig0024115:+1525 | Msa1414380:CDS |
| GAATAATCCTGCAGCTTTAC+TGG | 0.231323 | tig0024115:+6988 | Msa1414380:CDS |
| GACATTAGAGAAATGCTTCT+TGG | 0.253804 | tig0024115:+5147 | Msa1414380:CDS |
| GGCGTATGGTTGGGCATTAC+TGG | 0.256524 | tig0024115:+1605 | Msa1414380:CDS |
| TGAGCGGGTTGGAGGGAGTT+TGG | 0.257494 | tig0024115:-1323 | Msa1414380:intergenic |
| ACTGGCTTTATCTTGGTATT+GGG | 0.283763 | tig0024115:+7006 | Msa1414380:CDS |
| CAAGGAGATTGGTTTGTATC+TGG | 0.296040 | tig0024115:+1465 | Msa1414380:CDS |
| TTACAAGATTATTGCTCATA+TGG | 0.305392 | tig0024115:+10525 | Msa1414380:CDS |
| TATGGTTATCCTTCCGTATA+AGG | 0.314485 | tig0024115:+7163 | Msa1414380:CDS |
| CAGCTTTACTGGCTTTATCT+TGG | 0.318748 | tig0024115:+6999 | Msa1414380:CDS |
| GAGGGAGTTTGGGTCGGGTT+TGG | 0.326969 | tig0024115:-1312 | Msa1414380:intergenic |
| AGGATTGAATTTCCCAAAAC+AGG | 0.329174 | tig0024115:+4514 | Msa1414380:CDS |
| TTGGGTCGGGTTTGGTATAT+AGG | 0.331800 | tig0024115:-1304 | Msa1414380:intergenic |
| AACACAAGAAAACTCTTTGT+TGG | 0.333243 | tig0024115:+4932 | Msa1414380:CDS |
| GAGCGGGTTGGAGGGAGTTT+GGG | 0.336535 | tig0024115:-1322 | Msa1414380:intergenic |
| TGGTTGGGCATTACTGGCTT+AGG | 0.338362 | tig0024115:+1611 | Msa1414380:CDS |
| AATAACAGGCTGTCCTTATA+CGG | 0.341152 | tig0024115:-7176 | Msa1414380:intergenic |
| AATCAAGGAATTAGTGTCTA+TGG | 0.341364 | tig0024115:+7664 | Msa1414380:CDS |
| ATTAGTGTCTATGGAAATAA+AGG | 0.353205 | tig0024115:+7673 | Msa1414380:CDS |
| AGCTAACCATCCCTCAATTC+TGG | 0.353618 | tig0024115:-4964 | Msa1414380:intergenic |
| AACAAGCCATTTCTAGTCTC+AGG | 0.354533 | tig0024115:-4464 | Msa1414380:intergenic |
| CTCAAGACGGTGGTGATTTG+TGG | 0.360512 | tig0024115:-1392 | Msa1414380:intergenic |
| TCAATTGTCAATGGTTCAAC+AGG | 0.372126 | tig0024115:-10308 | Msa1414380:intergenic |
| ATACTTTCTGTTGGGATTGG+AGG | 0.372435 | tig0024115:+2870 | Msa1414380:CDS |
| AATATGACTTGGATGGTAAT+CGG | 0.375158 | tig0024115:+7246 | Msa1414380:CDS |
| AAATAGTAGTTGGTTGGGTT+TGG | 0.379177 | tig0024115:+10798 | Msa1414380:three_prime_UTR |
| CGCTGATGGATGAGGCAAAT+AGG | 0.379265 | tig0024115:+5175 | Msa1414380:CDS |
| CCTGCTTCCAGCAGCTCTGC+AGG | 0.384285 | tig0024115:+5043 | Msa1414380:CDS |
| AGTATCTACTAAATAATAAC+AGG | 0.384552 | tig0024115:-7190 | Msa1414380:intergenic |
| CAGATACTTTCTGTTGGGAT+TGG | 0.397695 | tig0024115:+2867 | Msa1414380:CDS |
| GCTATGGAGGATCTTGAAAA+AGG | 0.402824 | tig0024115:+1559 | Msa1414380:CDS |
| GGGTTGGAGGGAGTTTGGGT+CGG | 0.406429 | tig0024115:-1318 | Msa1414380:intergenic |
| ACCTTGAGTGGAGGATTGTC+AGG | 0.406802 | tig0024115:-2933 | Msa1414380:intergenic |
| AGATGAGTTTGTGAAGGAAA+TGG | 0.410934 | tig0024115:+1510 | Msa1414380:CDS |
| GGGATTGGAGGTTCTGCACT+TGG | 0.412780 | tig0024115:+2882 | Msa1414380:CDS |
| AGAAGGATCCACGTGCTCTA+TGG | 0.417823 | tig0024115:+1413 | Msa1414380:CDS |
| CTATACCAGCACAAGGAGAT+TGG | 0.417991 | tig0024115:+1454 | Msa1414380:CDS |
| TGTTGTGAACGACGTCGTAT+TGG | 0.420390 | tig0024115:-1277 | Msa1414380:intergenic |
| GCTACTTCTTCAATTGTCAA+TGG | 0.424034 | tig0024115:-10317 | Msa1414380:intergenic |
| TTGGGTTTGGTTATCTGAAA+AGG | 0.425371 | tig0024115:+10811 | Msa1414380:three_prime_UTR |
| GGTTGGGCATTACTGGCTTA+GGG | 0.425715 | tig0024115:+1612 | Msa1414380:CDS |
| TTGGAATAGAGGATGCGTTT+TGG | 0.431690 | tig0024115:-1258 | Msa1414380:intergenic |
| CTAGATTTCCCATGTTTGAC+TGG | 0.433931 | tig0024115:+4985 | Msa1414380:CDS |
| TTCAACGCCGCCTGAAACCT+CGG | 0.436028 | tig0024115:-1535 | Msa1414380:intergenic |
| ATCTGGATGTGAGCCGGGTC+GGG | 0.438884 | tig0024115:+1482 | Msa1414380:CDS |
| CCTGCAGAGCTGCTGGAAGC+AGG | 0.439124 | tig0024115:-5043 | Msa1414380:intergenic |
| TGCGTCTTAAGAAATATATT+CGG | 0.439968 | tig0024115:-1649 | Msa1414380:intergenic |
| TTGATTTCACAGGTTAATCA+AGG | 0.441570 | tig0024115:+7649 | Msa1414380:intron |
| CAAAAGGCCTTTCGTGAAGC+AGG | 0.441606 | tig0024115:+4494 | Msa1414380:CDS |
| ACATGTGGTGACTACCTGTT+TGG | 0.444640 | tig0024115:+7908 | Msa1414380:CDS |
| TTACTCAGATACTTTCTGTT+GGG | 0.445211 | tig0024115:+2862 | Msa1414380:CDS |
| GGTTGGAGGGAGTTTGGGTC+GGG | 0.448230 | tig0024115:-1317 | Msa1414380:intergenic |
| TAGTAGATACTTGCAGCAAT+TGG | 0.450423 | tig0024115:+7202 | Msa1414380:CDS |
| ATAGACCACCGGGTCATGAT+TGG | 0.451457 | tig0024115:+7867 | Msa1414380:CDS |
| TGCTCTATGGCGGCGTTACG+TGG | 0.454052 | tig0024115:+1426 | Msa1414380:CDS |
| CCAATTACCTGCAGAGCTGC+TGG | 0.454708 | tig0024115:-5050 | Msa1414380:intergenic |
| AGAAAATATGCTTACCAGGC+TGG | 0.454886 | tig0024115:-8226 | Msa1414380:intergenic |
| TGGGTCGGGTTTGGTATATA+GGG | 0.456158 | tig0024115:-1303 | Msa1414380:intergenic |
| TATCTGGATGTGAGCCGGGT+CGG | 0.458370 | tig0024115:+1481 | Msa1414380:CDS |
| GAGGTTTCAGGCGGCGTTGA+AGG | 0.458413 | tig0024115:+1537 | Msa1414380:CDS |
| CCAACCATACGCCCTTCATC+AGG | 0.468880 | tig0024115:-1595 | Msa1414380:intergenic |
| TCAGGCGGCGTTGAAGGCTA+TGG | 0.474578 | tig0024115:+1543 | Msa1414380:CDS |
| CTGATGAAGGGCGTATGGTT+GGG | 0.475863 | tig0024115:+1596 | Msa1414380:CDS |
| CATGATTGGGAGCTTGAACC+AGG | 0.476498 | tig0024115:+7881 | Msa1414380:CDS |
| ACAAGTGTCGAAGCTAGCTC+AGG | 0.476656 | tig0024115:-4053 | Msa1414380:intergenic |
| GATAATACTGCCAGAATTGA+GGG | 0.479260 | tig0024115:+4954 | Msa1414380:CDS |
| ATATGACTTGGATGGTAATC+GGG | 0.482191 | tig0024115:+7247 | Msa1414380:CDS |
| GCTTCTTGGTGCATCGCTGA+TGG | 0.487393 | tig0024115:+5161 | Msa1414380:CDS |
| AGCAATTAGTGCTCTGTCGT+TGG | 0.487702 | tig0024115:-10551 | Msa1414380:intergenic |
| CAGCTTTGTATTCTAATGAC+CGG | 0.488369 | tig0024115:+8087 | Msa1414380:CDS |
| AACCTTCCCTCGGGAGATGA+AGG | 0.491294 | tig0024115:-2840 | Msa1414380:intergenic |
| TGGCTTGTTAGAAGTACAAA+AGG | 0.492563 | tig0024115:+4478 | Msa1414380:CDS |
| TTCTGAAATGTGGATTTCAC+TGG | 0.494441 | tig0024115:-10655 | Msa1414380:intergenic |
| CTACCTGTTTGGTATGCTAC+AGG | 0.494784 | tig0024115:+7919 | Msa1414380:CDS |
| TGAATACGATATAAACCAAA+TGG | 0.495272 | tig0024115:+10851 | Msa1414380:three_prime_UTR |
| AAGCATTTCTCTAATGTCAA+TGG | 0.497583 | tig0024115:-5142 | Msa1414380:intergenic |
| TTTACTCAGATACTTTCTGT+TGG | 0.497718 | tig0024115:+2861 | Msa1414380:CDS |
| CACGGCGGAGAGATCCGTTC+CGG | 0.497897 | tig0024115:-1365 | Msa1414380:intergenic |
| CACTGTATGAACGAGCAGTT+GGG | 0.499177 | tig0024115:+8168 | Msa1414380:CDS |
| GTTTGTATCTGGATGTGAGC+CGG | 0.501101 | tig0024115:+1476 | Msa1414380:CDS |
| AAATATATTCGGAGCACGAT+TGG | 0.503067 | tig0024115:-1638 | Msa1414380:intergenic |
| TAGACCACCGGGTCATGATT+GGG | 0.503381 | tig0024115:+7868 | Msa1414380:CDS |
| GAAGTAACACCTCGATCAGT+TGG | 0.503715 | tig0024115:+8134 | Msa1414380:CDS |
| GGCACCCCTGAGACTAGAAA+TGG | 0.503909 | tig0024115:+4458 | Msa1414380:CDS |
| CCTGATGAAGGGCGTATGGT+TGG | 0.505911 | tig0024115:+1595 | Msa1414380:CDS |
| CGTGCGACTGAGCGGGTTGG+AGG | 0.507308 | tig0024115:-1331 | Msa1414380:intergenic |
| TCTTGGTATTGGGCTACAGA+TGG | 0.508300 | tig0024115:+7016 | Msa1414380:CDS |
| AGCACTTCAAAAGCGGGTGC+TGG | 0.509019 | tig0024115:+8475 | Msa1414380:CDS |
| GGATAATACTGCCAGAATTG+AGG | 0.509420 | tig0024115:+4953 | Msa1414380:CDS |
| TATTGGGCTACAGATGGTGT+AGG | 0.509802 | tig0024115:+7022 | Msa1414380:CDS |
| TTTGTATCTGGATGTGAGCC+GGG | 0.511763 | tig0024115:+1477 | Msa1414380:CDS |
| TATGGCGGCGTTACGTGGAC+TGG | 0.515487 | tig0024115:+1431 | Msa1414380:CDS |
| CAAAAGCACAAATAGCATCA+AGG | 0.516727 | tig0024115:-1684 | Msa1414380:intergenic |
| AATTTCGCGTGCGACTGAGC+GGG | 0.517142 | tig0024115:-1338 | Msa1414380:intergenic |
| ACCTCCTACCCAGTCAAACA+TGG | 0.521633 | tig0024115:-4994 | Msa1414380:intergenic |
| GCGATTGCGAATCCTGATGA+AGG | 0.522003 | tig0024115:+1583 | Msa1414380:CDS |
| GTGTTCAGATACCCATCAAA+AGG | 0.524466 | tig0024115:+10688 | Msa1414380:three_prime_UTR |
| ATTGACAACACCGATCCTGC+TGG | 0.525609 | tig0024115:+4002 | Msa1414380:CDS |
| GTGCGACTGAGCGGGTTGGA+GGG | 0.525756 | tig0024115:-1330 | Msa1414380:intergenic |
| CTCCTTCATCTCCCGAGGGA+AGG | 0.527922 | tig0024115:+2838 | Msa1414380:CDS |
| ATGATCAATGCCAGCAGGAT+CGG | 0.534672 | tig0024115:-4012 | Msa1414380:intergenic |
| AGACCTGTAGCATACCAAAC+AGG | 0.535335 | tig0024115:-7922 | Msa1414380:intergenic |
| ATCTATAACATTCTGAAATG+TGG | 0.536853 | tig0024115:-10665 | Msa1414380:intergenic |
| ATAGCATCCATTACCTTGAG+TGG | 0.537146 | tig0024115:-2945 | Msa1414380:intergenic |
| CAATGTTTCCACAGGGAACA+AGG | 0.540853 | tig0024115:+8063 | Msa1414380:intron |
| GAAGCTGGTAAGAAAGCGGC+AGG | 0.544867 | tig0024115:+8443 | Msa1414380:CDS |
| CCCATGTTTGACTGGGTAGG+AGG | 0.545618 | tig0024115:+4993 | Msa1414380:CDS |
| ACAAGCCATTTCTAGTCTCA+GGG | 0.546103 | tig0024115:-4463 | Msa1414380:intergenic |
| AAATATGAGAGGTCACGTAA+TGG | 0.546447 | tig0024115:+10875 | Msa1414380:three_prime_UTR |
| ACAAACCAATCTCCTTGTGC+TGG | 0.548735 | tig0024115:-1459 | Msa1414380:intergenic |
| ATCTGATGATCAATGCCAGC+AGG | 0.552618 | tig0024115:-4017 | Msa1414380:intergenic |
| CTCGTTCATACAGTGCAACA+AGG | 0.552959 | tig0024115:-8160 | Msa1414380:intergenic |
| TTTCTTTGCGACATTCATTG+AGG | 0.554257 | tig0024115:+7835 | Msa1414380:CDS |
| ACGACGTCGTATTGGAATAG+AGG | 0.557650 | tig0024115:-1269 | Msa1414380:intergenic |
| AGTATTAGCACTTCAAAAGC+GGG | 0.558394 | tig0024115:+8469 | Msa1414380:CDS |
| TGGACCACAGTTTGTTGCAG+AGG | 0.560208 | tig0024115:+2902 | Msa1414380:CDS |
| TGGTGCATCGCTGATGGATG+AGG | 0.561279 | tig0024115:+5167 | Msa1414380:CDS |
| TACAGATGGTGTAGGGTCCA+AGG | 0.561722 | tig0024115:+7030 | Msa1414380:CDS |
| TTCTTGCACGGTGACTGTGA+TGG | 0.562291 | tig0024115:-8114 | Msa1414380:intergenic |
| AATCAATTAGGTGTGGAAGC+TGG | 0.562966 | tig0024115:+8428 | Msa1414380:intron |
| CGGTGACTGTGATGGACTCC+CGG | 0.563009 | tig0024115:-8106 | Msa1414380:intergenic |
| ATTGGGCTACAGATGGTGTA+GGG | 0.565115 | tig0024115:+7023 | Msa1414380:CDS |
| TGATCAAACAATCCACAAGT+TGG | 0.567002 | tig0024115:-10908 | Msa1414380:intergenic |
| ACTTGTAATCGTGATTTCAA+AGG | 0.567343 | tig0024115:+4070 | Msa1414380:CDS |
| GATAAAGCCAGTAAAGCTGC+AGG | 0.568963 | tig0024115:-6995 | Msa1414380:intergenic |
| ATTCAATCCTGCTTCACGAA+AGG | 0.569017 | tig0024115:-4501 | Msa1414380:intergenic |
| TCTAGGCAAAGAATATGACT+TGG | 0.570938 | tig0024115:+7235 | Msa1414380:CDS |
| GGAATAAGCTGACCAACTTG+TGG | 0.571597 | tig0024115:+10896 | Msa1414380:three_prime_UTR |
| TATCTGAGTAAACCTTCCCT+CGG | 0.571895 | tig0024115:-2850 | Msa1414380:intergenic |
| AAAAGCACAAATAGCATCAA+GGG | 0.572530 | tig0024115:-1683 | Msa1414380:intergenic |
| ATACTTGCAGCAATTGGTCA+TGG | 0.574951 | tig0024115:+7208 | Msa1414380:CDS |
| TTGATCTATCTTCAGAGTGG+AGG | 0.575273 | tig0024115:+4437 | Msa1414380:intron |
| GAATTTCGCGTGCGACTGAG+CGG | 0.576086 | tig0024115:-1339 | Msa1414380:intergenic |
| AGCTTTGTATTCTAATGACC+GGG | 0.578305 | tig0024115:+8088 | Msa1414380:CDS |
| ATCTGAGTAAACCTTCCCTC+GGG | 0.579523 | tig0024115:-2849 | Msa1414380:intergenic |
| TCGCGTGCGACTGAGCGGGT+TGG | 0.581217 | tig0024115:-1334 | Msa1414380:intergenic |
| GTTTACAGATGAGTTTGTGA+AGG | 0.585076 | tig0024115:+1504 | Msa1414380:CDS |
| AAGGTAACTGTGGTTCTCCA+AGG | 0.586957 | tig0024115:+10575 | Msa1414380:CDS |
| ATAAATGCTTATCACCAGCC+TGG | 0.588609 | tig0024115:+8212 | Msa1414380:CDS |
| TAGATTTCCCATGTTTGACT+GGG | 0.589527 | tig0024115:+4986 | Msa1414380:CDS |
| GCACTGTATGAACGAGCAGT+TGG | 0.589589 | tig0024115:+8167 | Msa1414380:CDS |
| TCAAAAGGAAGAAAGCAGCT+TGG | 0.589668 | tig0024115:+10703 | Msa1414380:three_prime_UTR |
| TTTCCCATGTTTGACTGGGT+AGG | 0.596507 | tig0024115:+4990 | Msa1414380:CDS |
| AGCATTTATGTTGACAAGTG+AGG | 0.597035 | tig0024115:-8198 | Msa1414380:intergenic |
| GGCAAAGAATATGACTTGGA+TGG | 0.599763 | tig0024115:+7239 | Msa1414380:CDS |
| TCGAGGTGTTACTTCTTGCA+CGG | 0.601310 | tig0024115:-8126 | Msa1414380:intergenic |
| TCCTGACAATCCTCCACTCA+AGG | 0.604476 | tig0024115:+2932 | Msa1414380:CDS |
| TACATTCAGCAACTGAGGGA+AGG | 0.606484 | tig0024115:+7803 | Msa1414380:CDS |
| CTTCCCTCGGGAGATGAAGG+AGG | 0.612455 | tig0024115:-2837 | Msa1414380:intergenic |
| AAATCACCACCGTCTTGAGA+AGG | 0.612976 | tig0024115:+1396 | Msa1414380:CDS |
| ACTCATCTGTAAACCCGACC+CGG | 0.613128 | tig0024115:-1495 | Msa1414380:intergenic |
| AGGATCCACGTGCTCTATGG+CGG | 0.615222 | tig0024115:+1416 | Msa1414380:CDS |
| AACCAAATGGAAAATATGAG+AGG | 0.616709 | tig0024115:+10864 | Msa1414380:three_prime_UTR |
| AAGTATTAGCACTTCAAAAG+CGG | 0.617434 | tig0024115:+8468 | Msa1414380:CDS |
| ACAGATACATTCAGCAACTG+AGG | 0.617577 | tig0024115:+7798 | Msa1414380:intron |
| GCATCCATTACCTTGAGTGG+AGG | 0.617947 | tig0024115:-2942 | Msa1414380:intergenic |
| TAAGCCTCCTTCATCTCCCG+AGG | 0.620926 | tig0024115:+2833 | Msa1414380:CDS |
| CAATTGGTCATGGAATCTCT+AGG | 0.621908 | tig0024115:+7218 | Msa1414380:CDS |
| GGTGCTACGTGATAGACCAC+CGG | 0.621937 | tig0024115:+7856 | Msa1414380:CDS |
| TGGCAGTGCTAAACGAGGCA+AGG | 0.624409 | tig0024115:+8495 | Msa1414380:CDS |
| ACGCGAAATTCCGACCGGAA+CGG | 0.624713 | tig0024115:+1351 | Msa1414380:CDS |
| CGATTGCGAATCCTGATGAA+GGG | 0.626238 | tig0024115:+1584 | Msa1414380:CDS |
| GTGGTGATTTGTGGATTGCA+CGG | 0.626337 | tig0024115:-1383 | Msa1414380:intergenic |
| GATCATCAGATTGCACAACT+CGG | 0.631396 | tig0024115:+4029 | Msa1414380:CDS |
| ACAAGGGCTCCAACTGATCG+AGG | 0.631555 | tig0024115:-8143 | Msa1414380:intergenic |
| GAATCCTGATGAAGGGCGTA+TGG | 0.633371 | tig0024115:+1591 | Msa1414380:CDS |
| GGCGGCGTTGAAGGCTATGG+AGG | 0.634367 | tig0024115:+1546 | Msa1414380:CDS |
| CCTCCTACCCAGTCAAACAT+GGG | 0.637589 | tig0024115:-4993 | Msa1414380:intergenic |
| AGTGCCTCTGCAACAAACTG+TGG | 0.640437 | tig0024115:-2906 | Msa1414380:intergenic |
| TAGTCACCACATGTAACACC+TGG | 0.641754 | tig0024115:-7899 | Msa1414380:intergenic |
| CAGATACATTCAGCAACTGA+GGG | 0.642015 | tig0024115:+7799 | Msa1414380:intron |
| TCAAGCTCCCAATCATGACC+CGG | 0.642104 | tig0024115:-7875 | Msa1414380:intergenic |
| GTCGCACGCGAAATTCCGAC+CGG | 0.642601 | tig0024115:+1346 | Msa1414380:CDS |
| CTAATTGCTGAAGGTAACTG+TGG | 0.644664 | tig0024115:+10565 | Msa1414380:CDS |
| CACGTGGATCCTTCTCAAGA+CGG | 0.645193 | tig0024115:-1405 | Msa1414380:intergenic |
| CAAGTGTCGAAGCTAGCTCA+GGG | 0.653724 | tig0024115:-4052 | Msa1414380:intergenic |
| GACAGAGCACTAATTGCTGA+AGG | 0.656685 | tig0024115:+10556 | Msa1414380:CDS |
| TGTGGAAGCTGGTAAGAAAG+CGG | 0.664025 | tig0024115:+8439 | Msa1414380:CDS |
| AATGGAGCCGAGGTTTCAGG+CGG | 0.665850 | tig0024115:+1528 | Msa1414380:CDS |
| ACGTCGGAGATGTCTGCAGT+CGG | 0.667077 | tig0024115:+5020 | Msa1414380:CDS |
| GCGGAGAGATCCGTTCCGGT+CGG | 0.668432 | tig0024115:-1361 | Msa1414380:intergenic |
| TTGTGAAGGAAATGGAGCCG+AGG | 0.668658 | tig0024115:+1518 | Msa1414380:CDS |
| GGTGCTGGCAGTGCTAAACG+AGG | 0.669860 | tig0024115:+8490 | Msa1414380:CDS |
| CAAGCCATTTCTAGTCTCAG+GGG | 0.670619 | tig0024115:-4462 | Msa1414380:intergenic |
| ATACTGCCAGAATTGAGGGA+TGG | 0.673611 | tig0024115:+4958 | Msa1414380:CDS |
| TCGTTCATACAGTGCAACAA+GGG | 0.674896 | tig0024115:-8159 | Msa1414380:intergenic |
| AAGCCTCCTTCATCTCCCGA+GGG | 0.677441 | tig0024115:+2834 | Msa1414380:CDS |
| AGCTCCCAATCATGACCCGG+TGG | 0.687471 | tig0024115:-7872 | Msa1414380:intergenic |
| TAACGCCGCCATAGAGCACG+TGG | 0.690006 | tig0024115:-1421 | Msa1414380:intergenic |
| GGACTGGCTATACCAGCACA+AGG | 0.702883 | tig0024115:+1447 | Msa1414380:CDS |
| CTTGAACCAGGTGTTACATG+TGG | 0.724327 | tig0024115:+7893 | Msa1414380:CDS |
| GTGGATCCTTCTCAAGACGG+TGG | 0.728539 | tig0024115:-1402 | Msa1414380:intergenic |
| GTGATTTGTGGATTGCACGG+CGG | 0.732787 | tig0024115:-1380 | Msa1414380:intergenic |
| TGAGGCAAATAGGACTACCG+TGG | 0.735792 | tig0024115:+5185 | Msa1414380:CDS |
| CTGGGTAGGAGGTAGAACGT+CGG | 0.757614 | tig0024115:+5004 | Msa1414380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTTATTTTTTTGTC+TGG | - | tig0024115:1970-1989 | Msa1414380:intergenic | 10.0% |
| !! | TTGAAAAAATAACTATAATA+TGG | - | tig0024115:3496-3515 | Msa1414380:intergenic | 10.0% |
| !! | TTATGAAAATATTTGAAAAT+GGG | - | tig0024115:4638-4657 | Msa1414380:intergenic | 10.0% |
| !! | ATTATGAAAATATTTGAAAA+TGG | - | tig0024115:4639-4658 | Msa1414380:intergenic | 10.0% |
| !!! | TTGGATTATTTTTATTTTTT+TGG | - | tig0024115:6623-6642 | Msa1414380:intergenic | 10.0% |
| !!! | TTTTTAAGATAATAAACAAA+AGG | - | tig0024115:9065-9084 | Msa1414380:intergenic | 10.0% |
| !!! | AAAAGAAAAAAGTATTTTAA+AGG | + | tig0024115:9688-9707 | Msa1414380:intron | 10.0% |
| !!! | AAAGAAAAAAGTATTTTAAA+GGG | + | tig0024115:9689-9708 | Msa1414380:intron | 10.0% |
| !! | GTAAATAACAAATAAAAAAA+AGG | + | tig0024115:9915-9934 | Msa1414380:intron | 10.0% |
| !! | AATTGAAAAAATTAATATAG+GGG | - | tig0024115:10390-10409 | Msa1414380:intergenic | 10.0% |
| !! | TCAATGTTAATAAATGTTAA+AGG | + | tig0024115:2162-2181 | Msa1414380:intron | 15.0% |
| !! | TAGAAACATTATTTATCTAT+TGG | + | tig0024115:3365-3384 | Msa1414380:intron | 15.0% |
| !!! | ATATGGAAATAAGTTTTTAT+TGG | + | tig0024115:3939-3958 | Msa1414380:intron | 15.0% |
| !!! | TATGGAAATAAGTTTTTATT+GGG | + | tig0024115:3940-3959 | Msa1414380:intron | 15.0% |
| !!! | TAATTTTAATGGACTTATAA+AGG | + | tig0024115:4377-4396 | Msa1414380:intron | 15.0% |
| !! | GAGTTTATATTAAACTAATA+TGG | - | tig0024115:4762-4781 | Msa1414380:intergenic | 15.0% |
| !! | AAATTAAGTTATTACTACTT+TGG | + | tig0024115:5083-5102 | Msa1414380:intron | 15.0% |
| !!! | TTCTTAAATATATTTTCTAG+TGG | + | tig0024115:5527-5546 | Msa1414380:intron | 15.0% |
| !! | TAAGAATTTGAATAATAATG+TGG | + | tig0024115:5763-5782 | Msa1414380:intron | 15.0% |
| !! | AATAAAATATCTCAGAATTT+GGG | + | tig0024115:6092-6111 | Msa1414380:intron | 15.0% |
| !!! | TTCCATTTTTTTTTTAAGTT+TGG | + | tig0024115:7725-7744 | Msa1414380:intron | 15.0% |
| !! | AACCAAACTTAAAAAAAAAA+TGG | - | tig0024115:7730-7749 | Msa1414380:intergenic | 15.0% |
| !!! | TAAATTTTTTAAAAGAATGG+CGG | + | tig0024115:7998-8017 | Msa1414380:intron | 15.0% |
| !!! | TTTATTTGTTATTTACAAGT+AGG | - | tig0024115:9911-9930 | Msa1414380:intergenic | 15.0% |
| !! | ATAAAAAAAAATTGCAGTTA+AGG | - | tig0024115:10272-10291 | Msa1414380:intergenic | 15.0% |
| !!! | TTTTTTTTATTGTTGAGTGT+TGG | - | tig0024115:1238-1257 | None:intergenic | 20.0% |
| !!! | TTTTACTACTAAAATCAACT+CGG | - | tig0024115:1782-1801 | Msa1414380:intergenic | 20.0% |
| !!! | CAATATTTTGTTCTAAATAG+TGG | - | tig0024115:2365-2384 | Msa1414380:intergenic | 20.0% |
| !! | AACAAAATATTGTCAAATAG+CGG | + | tig0024115:2373-2392 | Msa1414380:intron | 20.0% |
| !! | ATCTCTAATAACAAAAGTTA+AGG | + | tig0024115:2484-2503 | Msa1414380:intron | 20.0% |
| !!! | TTAAGGTAGAGATTTTTATA+TGG | + | tig0024115:2501-2520 | Msa1414380:intron | 20.0% |
| !!! | AAACTGTTTTTGTTATACAA+CGG | - | tig0024115:2541-2560 | Msa1414380:intergenic | 20.0% |
| !!! | AATTGTATTTGTTGTTTATG+TGG | + | tig0024115:2759-2778 | Msa1414380:intron | 20.0% |
| !!! | ATTGTATTTGTTGTTTATGT+GGG | + | tig0024115:2760-2779 | Msa1414380:intron | 20.0% |
| !! | ATTATTAAAAATAGAGCGAA+TGG | + | tig0024115:3137-3156 | Msa1414380:intron | 20.0% |
| !! | TTATTAAAAATAGAGCGAAT+GGG | + | tig0024115:3138-3157 | Msa1414380:intron | 20.0% |
| !!! | TTCTAAAAGGTTATAGAAAT+AGG | - | tig0024115:4176-4195 | Msa1414380:intergenic | 20.0% |
| !!! | TATTTCTATAACCTTTTAGA+AGG | + | tig0024115:4175-4194 | Msa1414380:intron | 20.0% |
| !!! | GTTTTTCATAAGATCATATT+TGG | - | tig0024115:4321-4340 | Msa1414380:intergenic | 20.0% |
| !!! | AGTTTTACTTTTAACTATTC+AGG | + | tig0024115:4695-4714 | Msa1414380:intron | 20.0% |
| !! | ATCTTCAAACATTAAAACAT+TGG | - | tig0024115:5237-5256 | Msa1414380:intergenic | 20.0% |
| !! | TACAAAAACAGTCATTAAAT+AGG | - | tig0024115:5276-5295 | Msa1414380:intergenic | 20.0% |
| !!! | GTGTTTTATTAGTCAAATTT+AGG | + | tig0024115:5598-5617 | Msa1414380:intron | 20.0% |
| !!! | CAAATTTAGGATAGAATAAT+TGG | + | tig0024115:5611-5630 | Msa1414380:intron | 20.0% |
| !! | ATTTGATAGGGTTTAATTAT+TGG | + | tig0024115:5694-5713 | Msa1414380:intron | 20.0% |
| !! | TTTAATTATTGGTCAAAGTA+AGG | + | tig0024115:5705-5724 | Msa1414380:intron | 20.0% |
| !! | AATTATTAATGAGTCTACTA+AGG | + | tig0024115:5863-5882 | Msa1414380:intron | 20.0% |
| !! | ATTAGATAGGCTTATTTAAA+TGG | - | tig0024115:6043-6062 | Msa1414380:intergenic | 20.0% |
| !! | GAATAAAATATCTCAGAATT+TGG | + | tig0024115:6091-6110 | Msa1414380:intron | 20.0% |
| !!! | TAAGTAGTGCTTATTTTTTA+GGG | - | tig0024115:6169-6188 | Msa1414380:intergenic | 20.0% |
| !! | TTCAGTAATTTAGTAATTTC+TGG | - | tig0024115:6745-6764 | Msa1414380:intergenic | 20.0% |
| !! | AAACTATATAATTCATACCT+TGG | - | tig0024115:7050-7069 | Msa1414380:intergenic | 20.0% |
| !! | GGTATGAATTATATAGTTTA+TGG | + | tig0024115:7051-7070 | Msa1414380:intron | 20.0% |
| !! | AGTATCTACTAAATAATAAC+AGG | - | tig0024115:7193-7212 | Msa1414380:intergenic | 20.0% |
| !!! | TTGCTAGATTTTCTTTTAAT+CGG | + | tig0024115:7336-7355 | Msa1414380:intron | 20.0% |
| !!! | TTTTCTCTTTAGTTCATTTT+AGG | + | tig0024115:8243-8262 | Msa1414380:intron | 20.0% |
| !!! | AAAAACTCACTTTTTTAGAT+AGG | + | tig0024115:9083-9102 | Msa1414380:intron | 20.0% |
| !! | TCTAAATATTATCTTCTTCA+AGG | + | tig0024115:9192-9211 | Msa1414380:intron | 20.0% |
| !!! | ATACTTTTTTCTTTTGTCAA+CGG | - | tig0024115:9683-9702 | Msa1414380:intergenic | 20.0% |
| !!! | AAATAAATCTATTACTGACT+GGG | + | tig0024115:9724-9743 | Msa1414380:intron | 20.0% |
| !!! | TTATGTTTCCTTTTCATTTT+CGG | + | tig0024115:10113-10132 | Msa1414380:intron | 20.0% |
| !!! | GCATAACTAATTTTTTAACA+GGG | - | tig0024115:11015-11034 | Msa1414380:intergenic | 20.0% |
| !!! | AGCATAACTAATTTTTTAAC+AGG | - | tig0024115:11016-11035 | Msa1414380:intergenic | 20.0% |
| ! | TGCGTCTTAAGAAATATATT+CGG | - | tig0024115:1652-1671 | Msa1414380:intergenic | 25.0% |
| ! | CATTCAATGAAATAGTTAAG+TGG | + | tig0024115:1821-1840 | Msa1414380:intron | 25.0% |
| !! | AGTTCCTAATTAACTTTTAC+TGG | + | tig0024115:2100-2119 | Msa1414380:intron | 25.0% |
| ! | CTAACCAGTAAAAGTTAATT+AGG | - | tig0024115:2107-2126 | Msa1414380:intergenic | 25.0% |
| !!! | CTAATTAACTTTTACTGGTT+AGG | + | tig0024115:2105-2124 | Msa1414380:intron | 25.0% |
| ! | TAGTATGTTAACTGTTATGT+TGG | - | tig0024115:2221-2240 | Msa1414380:intergenic | 25.0% |
| !!! | TTGTTCTAAATAGTGGATTT+TGG | - | tig0024115:2358-2377 | Msa1414380:intergenic | 25.0% |
| !! | GTTAAAATAGTCTCTCATTT+TGG | - | tig0024115:2687-2706 | Msa1414380:intergenic | 25.0% |
| !!! | AATTGTGTTGTTTTTGTGAA+TGG | + | tig0024115:2970-2989 | Msa1414380:intron | 25.0% |
| ! | CATTTAAACATACTCATCAT+CGG | - | tig0024115:3045-3064 | Msa1414380:intergenic | 25.0% |
| !!! | AATGTTTTAAACAAAACCGA+CGG | - | tig0024115:3080-3099 | Msa1414380:intergenic | 25.0% |
| !!! | GTTTATTTTGAAAGTAGAAG+AGG | + | tig0024115:3198-3217 | Msa1414380:intron | 25.0% |
| ! | TATGTTATGTTAGTTAACTG+AGG | + | tig0024115:3297-3316 | Msa1414380:intron | 25.0% |
| ! | TTTAGTGCTTGCAATAATTA+GGG | + | tig0024115:3617-3636 | Msa1414380:intron | 25.0% |
| ! | GGGTGTATAATAGATAAAAT+TGG | - | tig0024115:4219-4238 | Msa1414380:intergenic | 25.0% |
| ! | GAACTATTATGTCAACAATA+GGG | - | tig0024115:4239-4258 | Msa1414380:intergenic | 25.0% |
| ! | AGAACTATTATGTCAACAAT+AGG | - | tig0024115:4240-4259 | Msa1414380:intergenic | 25.0% |
| !! | TTAACTTTTGGACTTTTCAA+CGG | - | tig0024115:4282-4301 | Msa1414380:intergenic | 25.0% |
| ! | TTGAAAAGTCCAAAAGTTAA+AGG | + | tig0024115:4282-4301 | Msa1414380:intron | 25.0% |
| ! | ATCATTCAGTAATTGCTAAA+AGG | - | tig0024115:4573-4592 | Msa1414380:intergenic | 25.0% |
| ! | TTCTGAGTATTCATCTATAA+TGG | + | tig0024115:4784-4803 | Msa1414380:intron | 25.0% |
| ! | TAGGATAGAATAATTGGATA+AGG | + | tig0024115:5617-5636 | Msa1414380:intron | 25.0% |
| ! | AGGATAGAATAATTGGATAA+GGG | + | tig0024115:5618-5637 | Msa1414380:intron | 25.0% |
| ! | AATAATTGGATAAGGGTTTA+TGG | + | tig0024115:5625-5644 | Msa1414380:intron | 25.0% |
| !!! | GGTTGTAAAGCTTTTTTTTT+TGG | - | tig0024115:6022-6041 | Msa1414380:intergenic | 25.0% |
| ! | TGTAGCTTAACTTATTAGAT+AGG | - | tig0024115:6056-6075 | Msa1414380:intergenic | 25.0% |
| !!! | CTAAGTAGTGCTTATTTTTT+AGG | - | tig0024115:6170-6189 | Msa1414380:intergenic | 25.0% |
| ! | CTAAAAAATAAGCACTACTT+AGG | + | tig0024115:6168-6187 | Msa1414380:intron | 25.0% |
| ! | AAAAATAATCCAATCCCATA+AGG | + | tig0024115:6630-6649 | Msa1414380:intron | 25.0% |
| !!! | AATTTAGTAATTTCTGGTTG+TGG | - | tig0024115:6739-6758 | Msa1414380:intergenic | 25.0% |
| ! | ACTATTGAGAATAGTAACTT+TGG | - | tig0024115:6814-6833 | Msa1414380:intergenic | 25.0% |
| !! | TGCATAAAATTGTTATTGAC+AGG | - | tig0024115:6962-6981 | Msa1414380:intergenic | 25.0% |
| !! | TCTGATTGAAATGTTGATAA+TGG | + | tig0024115:7492-7511 | Msa1414380:intron | 25.0% |
| !!! | CTGATTGAAATGTTGATAAT+GGG | + | tig0024115:7493-7512 | Msa1414380:intron | 25.0% |
| ! | TGAAATCAAAAAGGCAAATT+TGG | - | tig0024115:7638-7657 | Msa1414380:intergenic | 25.0% |
| ! | ATTAACCTGTGAAATCAAAA+AGG | - | tig0024115:7647-7666 | Msa1414380:intergenic | 25.0% |
| ! | ATTAGTGTCTATGGAAATAA+AGG | + | tig0024115:7673-7692 | Msa1414380:CDS | 25.0% |
| ! | TAAAAAACAATGTTTCCACA+GGG | + | tig0024115:8056-8075 | Msa1414380:intron | 25.0% |
| !!! | TAGTTCATTTTAGGATTCTA+TGG | + | tig0024115:8252-8271 | Msa1414380:intron | 25.0% |
| ! | TTATTGTTAGATCTTTCTGT+TGG | + | tig0024115:8313-8332 | Msa1414380:intron | 25.0% |
| ! | AACAAAACTAATAAAGTAGG+TGG | - | tig0024115:8375-8394 | Msa1414380:intergenic | 25.0% |
| ! | AGCAACAAAACTAATAAAGT+AGG | - | tig0024115:8378-8397 | Msa1414380:intergenic | 25.0% |
| ! | TAATTGATTATCAGATTCAG+TGG | - | tig0024115:8417-8436 | Msa1414380:intergenic | 25.0% |
| ! | ACTGAATCTGATAATCAATT+AGG | + | tig0024115:8416-8435 | Msa1414380:intron | 25.0% |
| ! | GTCTTAGCTAGAAATATATT+TGG | + | tig0024115:8556-8575 | Msa1414380:intron | 25.0% |
| !! | ACTAAATTTTAAGCATCAAG+TGG | + | tig0024115:8644-8663 | Msa1414380:intron | 25.0% |
| !! | CTAAATTTTAAGCATCAAGT+GGG | + | tig0024115:8645-8664 | Msa1414380:intron | 25.0% |
| ! | GTAGTTTAAAAGAAGTCAAA+CGG | + | tig0024115:8925-8944 | Msa1414380:intron | 25.0% |
| ! | TAGTTTAAAAGAAGTCAAAC+GGG | + | tig0024115:8926-8945 | Msa1414380:intron | 25.0% |
| !!! | GTGTGTTTCTATTTTTGTTT+TGG | + | tig0024115:8953-8972 | Msa1414380:intron | 25.0% |
| !! | AATACAAAAGTACAAGCAAA+TGG | - | tig0024115:9017-9036 | Msa1414380:intergenic | 25.0% |
| !! | AATAAAGTTATGATTGGTTG+CGG | - | tig0024115:9274-9293 | Msa1414380:intergenic | 25.0% |
| ! | ATATTGTTATGTTACTCTCA+AGG | + | tig0024115:9556-9575 | Msa1414380:intron | 25.0% |
| ! | TATTGTTATGTTACTCTCAA+GGG | + | tig0024115:9557-9576 | Msa1414380:intron | 25.0% |
| !!! | TATTGTAAAACTTGTTGCTT+TGG | - | tig0024115:9619-9638 | Msa1414380:intergenic | 25.0% |
| !! | GCAACAAGTTTTACAATAAA+TGG | + | tig0024115:9621-9640 | Msa1414380:intron | 25.0% |
| !! | AAGTTTTACAATAAATGGCA+AGG | + | tig0024115:9626-9645 | Msa1414380:intron | 25.0% |
| ! | CAAATAAATCTATTACTGAC+TGG | + | tig0024115:9723-9742 | Msa1414380:intron | 25.0% |
| ! | AAAAAAATTGCAGTTAAGGA+TGG | - | tig0024115:10268-10287 | Msa1414380:intergenic | 25.0% |
| !!! | TTTTTTTATTTTCAGCTGCA+AGG | + | tig0024115:10283-10302 | Msa1414380:intron | 25.0% |
| ! | TTACAAGATTATTGCTCATA+TGG | + | tig0024115:10525-10544 | Msa1414380:CDS | 25.0% |
| !!! | ATCTATAACATTCTGAAATG+TGG | - | tig0024115:10668-10687 | Msa1414380:intergenic | 25.0% |
| !!! | GAATAAACTATTTTGGTTCT+TGG | + | tig0024115:10725-10744 | Msa1414380:three_prime_UTR | 25.0% |
| !!! | CAAACTTTTGAAATAGTAGT+TGG | + | tig0024115:10788-10807 | Msa1414380:three_prime_UTR | 25.0% |
| !!! | TTTTGAAATAGTAGTTGGTT+GGG | + | tig0024115:10793-10812 | Msa1414380:three_prime_UTR | 25.0% |
| ! | TGAATACGATATAAACCAAA+TGG | + | tig0024115:10851-10870 | Msa1414380:three_prime_UTR | 25.0% |
| !!! | ACAGGGTACTTTTTTAATTT+GGG | - | tig0024115:10998-11017 | Msa1414380:intergenic | 25.0% |
| !!! | AACAGGGTACTTTTTTAATT+TGG | - | tig0024115:10999-11018 | Msa1414380:intergenic | 25.0% |
| ! | AAAAGCACAAATAGCATCAA+GGG | - | tig0024115:1686-1705 | Msa1414380:intergenic | 30.0% |
| GTCTTAAATGTGACATTTCA+TGG | - | tig0024115:1755-1774 | Msa1414380:intergenic | 30.0% | |
| GTTCAAATTCTGCTATTCTA+TGG | - | tig0024115:2321-2340 | Msa1414380:intergenic | 30.0% | |
| ! | AGTTTGTTCGAATTCTTCTA+CGG | - | tig0024115:2414-2433 | Msa1414380:intergenic | 30.0% |
| !!! | CACTTTTAAAGTCACACATA+TGG | + | tig0024115:2576-2595 | Msa1414380:intron | 30.0% |
| ! | TTTAAAGTCACACATATGGA+TGG | + | tig0024115:2580-2599 | Msa1414380:intron | 30.0% |
| TTTACTCAGATACTTTCTGT+TGG | + | tig0024115:2861-2880 | Msa1414380:CDS | 30.0% | |
| TTACTCAGATACTTTCTGTT+GGG | + | tig0024115:2862-2881 | Msa1414380:CDS | 30.0% | |
| !! | ATGTTTTAAACAAAACCGAC+GGG | - | tig0024115:3079-3098 | Msa1414380:intergenic | 30.0% |
| AGTAAAATGTGTGCAGTAAA+GGG | - | tig0024115:3109-3128 | Msa1414380:intergenic | 30.0% | |
| AAGTAAAATGTGTGCAGTAA+AGG | - | tig0024115:3110-3129 | Msa1414380:intergenic | 30.0% | |
| ATCATTTAAACACGAACTAG+TGG | + | tig0024115:3162-3181 | Msa1414380:intron | 30.0% | |
| ! | ATCTTTTCATGAAAAAGCTC+TGG | + | tig0024115:3582-3601 | Msa1414380:intron | 30.0% |
| GTTTAGTGCTTGCAATAATT+AGG | + | tig0024115:3616-3635 | Msa1414380:intron | 30.0% | |
| TTAGTGCTTGCAATAATTAG+GGG | + | tig0024115:3618-3637 | Msa1414380:intron | 30.0% | |
| TAATTAGGGGTAATCTTGTT+TGG | + | tig0024115:3631-3650 | Msa1414380:intron | 30.0% | |
| ! | TTTTATTGGGTGAAACAATG+TGG | + | tig0024115:3722-3741 | Msa1414380:intron | 30.0% |
| TTTATTGGGTGAAACAATGT+GGG | + | tig0024115:3723-3742 | Msa1414380:intron | 30.0% | |
| TCAAAACTCACTCTCTTATT+AGG | - | tig0024115:3804-3823 | Msa1414380:intergenic | 30.0% | |
| TGCTTGCAATTATAGTACTT+TGG | + | tig0024115:3867-3886 | Msa1414380:intron | 30.0% | |
| ACTTGTAATCGTGATTTCAA+AGG | + | tig0024115:4070-4089 | Msa1414380:CDS | 30.0% | |
| AATGGATAGACAAAAAGGAA+TGG | - | tig0024115:4132-4151 | Msa1414380:intergenic | 30.0% | |
| TCTCAAATGGATAGACAAAA+AGG | - | tig0024115:4137-4156 | Msa1414380:intergenic | 30.0% | |
| AAAATCCTTTGCTTCTCAAA+TGG | - | tig0024115:4150-4169 | Msa1414380:intergenic | 30.0% | |
| GTTAATCTTGACCTTCTAAA+AGG | - | tig0024115:4189-4208 | Msa1414380:intergenic | 30.0% | |
| !! | CCAACTATACCTTTAACTTT+TGG | - | tig0024115:4294-4313 | Msa1414380:intergenic | 30.0% |
| ! | CCAAAAGTTAAAGGTATAGT+TGG | + | tig0024115:4291-4310 | Msa1414380:intron | 30.0% |
| CCATTAAAATTAGTAGCACA+TGG | - | tig0024115:4369-4388 | Msa1414380:intergenic | 30.0% | |
| !! | CCATGTGCTACTAATTTTAA+TGG | + | tig0024115:4366-4385 | Msa1414380:intron | 30.0% |
| AGTAGTTGTTCACAATTCAA+AGG | - | tig0024115:4738-4757 | Msa1414380:intergenic | 30.0% | |
| TCATGAATTTCACAACGATA+TGG | + | tig0024115:4854-4873 | Msa1414380:intron | 30.0% | |
| CATGAATTTCACAACGATAT+GGG | + | tig0024115:4855-4874 | Msa1414380:intron | 30.0% | |
| TGATCATTTCTGTTAATGCA+GGG | + | tig0024115:4900-4919 | Msa1414380:intron | 30.0% | |
| AACACAAGAAAACTCTTTGT+TGG | + | tig0024115:4932-4951 | Msa1414380:CDS | 30.0% | |
| AAGCATTTCTCTAATGTCAA+TGG | - | tig0024115:5145-5164 | Msa1414380:intergenic | 30.0% | |
| TAGGAAAAAAATGCATACCA+CGG | - | tig0024115:5205-5224 | Msa1414380:intergenic | 30.0% | |
| ! | AAAACATTGGCTGGAATATT+AGG | - | tig0024115:5224-5243 | Msa1414380:intergenic | 30.0% |
| TCAAACATTAAAACATTGGC+TGG | - | tig0024115:5233-5252 | Msa1414380:intergenic | 30.0% | |
| GTATTTCACTATTTCACACA+TGG | - | tig0024115:5392-5411 | Msa1414380:intergenic | 30.0% | |
| AATAGTGAAATACATGACTG+AGG | + | tig0024115:5399-5418 | Msa1414380:intron | 30.0% | |
| AGACCAAATCATGTTACATA+TGG | + | tig0024115:5437-5456 | Msa1414380:intron | 30.0% | |
| TTGCCATATGTAACATGATT+TGG | - | tig0024115:5443-5462 | Msa1414380:intergenic | 30.0% | |
| AAATCATGTTACATATGGCA+AGG | + | tig0024115:5442-5461 | Msa1414380:intron | 30.0% | |
| TTGAATAATAATGTGGCTGA+AGG | + | tig0024115:5770-5789 | Msa1414380:intron | 30.0% | |
| TGAATAATAATGTGGCTGAA+GGG | + | tig0024115:5771-5790 | Msa1414380:intron | 30.0% | |
| ! | ATTGGTTTCTTGGATTTCAT+GGG | + | tig0024115:5837-5856 | Msa1414380:intron | 30.0% |
| !!! | GTTTTGAAACATCACAATCA+AGG | + | tig0024115:5957-5976 | Msa1414380:intron | 30.0% |
| !! | AAGCTGATTTTATAAGGATG+TGG | - | tig0024115:6125-6144 | Msa1414380:intergenic | 30.0% |
| !! | CCTTTCAAGCTGATTTTATA+AGG | - | tig0024115:6131-6150 | Msa1414380:intergenic | 30.0% |
| CCTTATAAAATCAGCTTGAA+AGG | + | tig0024115:6128-6147 | Msa1414380:intron | 30.0% | |
| GTCCAAAATTGCCAAAATTA+AGG | + | tig0024115:6276-6295 | Msa1414380:intron | 30.0% | |
| !! | CACCTTAATTTTGGCAATTT+TGG | - | tig0024115:6281-6300 | Msa1414380:intergenic | 30.0% |
| CAAAATTGCCAAAATTAAGG+TGG | + | tig0024115:6279-6298 | Msa1414380:intron | 30.0% | |
| TCTAATATCGTCTTCAACTT+TGG | + | tig0024115:6410-6429 | Msa1414380:intron | 30.0% | |
| CTAATATCGTCTTCAACTTT+GGG | + | tig0024115:6411-6430 | Msa1414380:intron | 30.0% | |
| GTGATATCTCTTGGAATTAT+GGG | + | tig0024115:6482-6501 | Msa1414380:intron | 30.0% | |
| TGTTATTATTATCAGAGCCT+AGG | - | tig0024115:6772-6791 | Msa1414380:intergenic | 30.0% | |
| ATCACGATCAAAAAAACCTA+AGG | + | tig0024115:6932-6951 | Msa1414380:intron | 30.0% | |
| AGTTTATGGATGATTAGCAA+CGG | + | tig0024115:7065-7084 | Msa1414380:intron | 30.0% | |
| TTTCCTTCTTTCTATTCCTA+AGG | + | tig0024115:7139-7158 | Msa1414380:intron | 30.0% | |
| TATCCTTAGGAATAGAAAGA+AGG | - | tig0024115:7145-7164 | Msa1414380:intergenic | 30.0% | |
| TCTTTCTATTCCTAAGGATA+TGG | + | tig0024115:7145-7164 | Msa1414380:intron | 30.0% | |
| ! | AATATGACTTGGATGGTAAT+CGG | + | tig0024115:7246-7265 | Msa1414380:CDS | 30.0% |
| GCAAAGTATACAAATCATGA+GGG | - | tig0024115:7300-7319 | Msa1414380:intergenic | 30.0% | |
| TGCAAAGTATACAAATCATG+AGG | - | tig0024115:7301-7320 | Msa1414380:intergenic | 30.0% | |
| ! | GTATACTTTGCACTTCATTT+TGG | + | tig0024115:7309-7328 | Msa1414380:intron | 30.0% |
| ! | TTCAACTGTTTCTTGATACA+AGG | - | tig0024115:7372-7391 | Msa1414380:intergenic | 30.0% |
| TGTATCAAGAAACAGTTGAA+TGG | + | tig0024115:7372-7391 | Msa1414380:intron | 30.0% | |
| ! | TAGTTTGTATCAACGTCATA+GGG | + | tig0024115:7519-7538 | Msa1414380:intron | 30.0% |
| !!! | ATTTGCCTTTTTGATTTCAC+AGG | + | tig0024115:7639-7658 | Msa1414380:intron | 30.0% |
| TTGATTTCACAGGTTAATCA+AGG | + | tig0024115:7649-7668 | Msa1414380:intron | 30.0% | |
| AATCAAGGAATTAGTGTCTA+TGG | + | tig0024115:7664-7683 | Msa1414380:CDS | 30.0% | |
| !!! | ATTTTTTAAAAGAATGGCGG+TGG | + | tig0024115:8001-8020 | Msa1414380:intron | 30.0% |
| CTAAAAAACAATGTTTCCAC+AGG | + | tig0024115:8055-8074 | Msa1414380:intron | 30.0% | |
| AAAGAGAAAATATGCTTACC+AGG | - | tig0024115:8233-8252 | Msa1414380:intergenic | 30.0% | |
| !!! | TTTTAGGATTCTATGGATCT+TGG | + | tig0024115:8259-8278 | Msa1414380:intron | 30.0% |
| !!! | ACTTGCTTTTTAACTTGTCT+TGG | + | tig0024115:8289-8308 | Msa1414380:intron | 30.0% |
| ATCTGATAATCAATTAGGTG+TGG | + | tig0024115:8421-8440 | Msa1414380:intron | 30.0% | |
| AAGTATTAGCACTTCAAAAG+CGG | + | tig0024115:8468-8487 | Msa1414380:CDS | 30.0% | |
| GAGGCTTTGCAAAAAAAAAA+GGG | + | tig0024115:8667-8686 | Msa1414380:intron | 30.0% | |
| CTTTGCAAAAAAAAAAGGGA+AGG | + | tig0024115:8671-8690 | Msa1414380:intron | 30.0% | |
| !! | AGAACCAATTTGTTACAGTA+TGG | + | tig0024115:8719-8738 | Msa1414380:intron | 30.0% |
| GAAACCATACTGTAACAAAT+TGG | - | tig0024115:8726-8745 | Msa1414380:intergenic | 30.0% | |
| TCGTACTAAATAGCATATCA+CGG | + | tig0024115:8834-8853 | Msa1414380:intron | 30.0% | |
| TACTCAGTAGTAACAAATAG+CGG | - | tig0024115:8908-8927 | Msa1414380:intergenic | 30.0% | |
| !!! | TTTTGTTTTGGCTTCTAGTT+TGG | + | tig0024115:8965-8984 | Msa1414380:intron | 30.0% |
| !!! | TTTGTTTTGGCTTCTAGTTT+GGG | + | tig0024115:8966-8985 | Msa1414380:intron | 30.0% |
| CTATCAATAGTAAACTCATG+TGG | - | tig0024115:8992-9011 | Msa1414380:intergenic | 30.0% | |
| CACATGAGTTTACTATTGAT+AGG | + | tig0024115:8990-9009 | Msa1414380:intron | 30.0% | |
| CAATGAAAACACAAACTGAT+AGG | - | tig0024115:9116-9135 | Msa1414380:intergenic | 30.0% | |
| ! | CTATCAGTTTGTGTTTTCAT+TGG | + | tig0024115:9114-9133 | Msa1414380:intron | 30.0% |
| GGCAGTAATAAAGTTATGAT+TGG | - | tig0024115:9280-9299 | Msa1414380:intergenic | 30.0% | |
| TCCTAAAAAAGTCACTAGTT+TGG | - | tig0024115:9301-9320 | Msa1414380:intergenic | 30.0% | |
| ATTGTTATGTTACTCTCAAG+GGG | + | tig0024115:9558-9577 | Msa1414380:intron | 30.0% | |
| ! | TAGATTTATTTGTTGACTGC+TGG | - | tig0024115:9715-9734 | Msa1414380:intergenic | 30.0% |
| !!! | AGTTTAGGTAGTTTTTTAGG+TGG | + | tig0024115:9842-9861 | Msa1414380:intron | 30.0% |
| AAATAAAAAAAAGGGCAGCT+CGG | + | tig0024115:9924-9943 | Msa1414380:intron | 30.0% | |
| GTACAATACACTAAAATGGT+GGG | - | tig0024115:9990-10009 | Msa1414380:intergenic | 30.0% | |
| GCTACTTGCAAATAACAAAT+GGG | + | tig0024115:10050-10069 | Msa1414380:intron | 30.0% | |
| ATAAGGACGCTAAATACAAA+AGG | - | tig0024115:10217-10236 | Msa1414380:intergenic | 30.0% | |
| ! | CAATGTTTCTGTAGAGAATA+AGG | - | tig0024115:10234-10253 | Msa1414380:intergenic | 30.0% |
| ! | CAGCTTGGAATAAACTATTT+TGG | + | tig0024115:10718-10737 | Msa1414380:three_prime_UTR | 30.0% |
| !!! | CTTTTGAAATAGTAGTTGGT+TGG | + | tig0024115:10792-10811 | Msa1414380:three_prime_UTR | 30.0% |
| AACCAAATGGAAAATATGAG+AGG | + | tig0024115:10864-10883 | Msa1414380:three_prime_UTR | 30.0% | |
| GTTTACAGATGAGTTTGTGA+AGG | + | tig0024115:1504-1523 | Msa1414380:CDS | 35.0% | |
| AGATGAGTTTGTGAAGGAAA+TGG | + | tig0024115:1510-1529 | Msa1414380:CDS | 35.0% | |
| AAATATATTCGGAGCACGAT+TGG | - | tig0024115:1641-1660 | Msa1414380:intergenic | 35.0% | |
| ! | CAAAAGCACAAATAGCATCA+AGG | - | tig0024115:1687-1706 | Msa1414380:intergenic | 35.0% |
| GACATGCATTGTTATATCCA+GGG | + | tig0024115:1901-1920 | Msa1414380:intron | 35.0% | |
| TTGTTATACAACGGTTGTGA+TGG | - | tig0024115:2532-2551 | Msa1414380:intergenic | 35.0% | |
| ! | TATGGATGGTTGTGATTTGT+TGG | + | tig0024115:2594-2613 | Msa1414380:intron | 35.0% |
| GGAAATGTTGAATCGTCTAT+TGG | + | tig0024115:2991-3010 | Msa1414380:intron | 35.0% | |
| TTTAAACACGAACTAGTGGA+AGG | + | tig0024115:3166-3185 | Msa1414380:intron | 35.0% | |
| ! | CTCTCTGAAGAATGCTTAAA+TGG | - | tig0024115:3234-3253 | Msa1414380:intergenic | 35.0% |
| ! | TTCAACCCTCACTCTTTTAT+TGG | + | tig0024115:3708-3727 | Msa1414380:intron | 35.0% |
| ! | TCAACCCTCACTCTTTTATT+GGG | + | tig0024115:3709-3728 | Msa1414380:intron | 35.0% |
| TTCACCCAATAAAAGAGTGA+GGG | - | tig0024115:3716-3735 | Msa1414380:intergenic | 35.0% | |
| TTTCACCCAATAAAAGAGTG+AGG | - | tig0024115:3717-3736 | Msa1414380:intergenic | 35.0% | |
| TTATTAGGTGACATCAACGT+GGG | - | tig0024115:3789-3808 | Msa1414380:intergenic | 35.0% | |
| ! | CAATCTGTGCTGTTGAATAT+TGG | + | tig0024115:3916-3935 | Msa1414380:intron | 35.0% |
| ! | GTGCTGTTGAATATTGGATA+TGG | + | tig0024115:3922-3941 | Msa1414380:intron | 35.0% |
| AAATTCCAAAGCATGATGTG+AGG | - | tig0024115:3967-3986 | Msa1414380:intergenic | 35.0% | |
| GATAGACAAAAAGGAATGGT+AGG | - | tig0024115:4128-4147 | Msa1414380:intergenic | 35.0% | |
| TCTATCCATTTGAGAAGCAA+AGG | + | tig0024115:4142-4161 | Msa1414380:intron | 35.0% | |
| !! | GTTTTGATCTATCTTCAGAG+TGG | + | tig0024115:4434-4453 | Msa1414380:intron | 35.0% |
| !! | TGGCTTGTTAGAAGTACAAA+AGG | + | tig0024115:4478-4497 | Msa1414380:CDS | 35.0% |
| AGGATTGAATTTCCCAAAAC+AGG | + | tig0024115:4514-4533 | Msa1414380:CDS | 35.0% | |
| ! | CCTGAGATTAAACCTGTTTT+GGG | - | tig0024115:4529-4548 | Msa1414380:intergenic | 35.0% |
| ! | ACCTGAGATTAAACCTGTTT+TGG | - | tig0024115:4530-4549 | Msa1414380:intergenic | 35.0% |
| ACAGATGTGCTAGTCATATA+GGG | - | tig0024115:4881-4900 | Msa1414380:intergenic | 35.0% | |
| GTGATCATTTCTGTTAATGC+AGG | + | tig0024115:4899-4918 | Msa1414380:intron | 35.0% | |
| GATAATACTGCCAGAATTGA+GGG | + | tig0024115:4954-4973 | Msa1414380:CDS | 35.0% | |
| TAGATTTCCCATGTTTGACT+GGG | + | tig0024115:4986-5005 | Msa1414380:CDS | 35.0% | |
| GACATTAGAGAAATGCTTCT+TGG | + | tig0024115:5147-5166 | Msa1414380:CDS | 35.0% | |
| TTAAATAGGAACAGCAGTCA+TGG | - | tig0024115:5262-5281 | Msa1414380:intergenic | 35.0% | |
| ACGCAAAGAGTTCTACTAAA+AGG | + | tig0024115:5314-5333 | Msa1414380:intron | 35.0% | |
| AGGGAAAGATGGAAACAAAT+GGG | - | tig0024115:5491-5510 | Msa1414380:intergenic | 35.0% | |
| AAGGGAAAGATGGAAACAAA+TGG | - | tig0024115:5492-5511 | Msa1414380:intergenic | 35.0% | |
| GAAGTTTACAGTCACGAAAA+GGG | - | tig0024115:5510-5529 | Msa1414380:intergenic | 35.0% | |
| AGAAGTTTACAGTCACGAAA+AGG | - | tig0024115:5511-5530 | Msa1414380:intergenic | 35.0% | |
| AGTTTGAATACAAGCAAGAC+AGG | + | tig0024115:5559-5578 | Msa1414380:intron | 35.0% | |
| ATTGGATAAGGGTTTATGGT+AGG | + | tig0024115:5629-5648 | Msa1414380:intron | 35.0% | |
| TTATTGGTCAAAGTAAGGAG+AGG | + | tig0024115:5710-5729 | Msa1414380:intron | 35.0% | |
| CACATTATTACCTCTGTGAT+TGG | + | tig0024115:5819-5838 | Msa1414380:intron | 35.0% | |
| !! | GATTGGTTTCTTGGATTTCA+TGG | + | tig0024115:5836-5855 | Msa1414380:intron | 35.0% |
| !!! | AGTGCTTATTTTTTAGGGCT+TGG | - | tig0024115:6164-6183 | Msa1414380:intergenic | 35.0% |
| GGTCATATATCTAGTCTAGT+CGG | + | tig0024115:6189-6208 | Msa1414380:intron | 35.0% | |
| CTTCAATACCTTCATTGTGT+TGG | - | tig0024115:6241-6260 | Msa1414380:intergenic | 35.0% | |
| !! | CAACACAATGAAGGTATTGA+AGG | + | tig0024115:6239-6258 | Msa1414380:intron | 35.0% |
| ! | CAAGCCTTATAAGCACTATT+GGG | + | tig0024115:6459-6478 | Msa1414380:intron | 35.0% |
| ! | AAGCCTTATAAGCACTATTG+GGG | + | tig0024115:6460-6479 | Msa1414380:intron | 35.0% |
| GGTGATATCTCTTGGAATTA+TGG | + | tig0024115:6481-6500 | Msa1414380:intron | 35.0% | |
| TTCATTGTGCTAGATGTGAA+GGG | - | tig0024115:6519-6538 | Msa1414380:intergenic | 35.0% | |
| GATTCTAAACCTTATGGGAT+TGG | - | tig0024115:6642-6661 | Msa1414380:intergenic | 35.0% | |
| ! | ATCCCATAAGGTTTAGAATC+AGG | + | tig0024115:6642-6661 | Msa1414380:intron | 35.0% |
| CTCCTGATTCTAAACCTTAT+GGG | - | tig0024115:6647-6666 | Msa1414380:intergenic | 35.0% | |
| TACGCAACAAAGTTACTATC+AGG | - | tig0024115:6698-6717 | Msa1414380:intergenic | 35.0% | |
| ! | TCTGGTTGTGGATTTTATCA+GGG | - | tig0024115:6727-6746 | Msa1414380:intergenic | 35.0% |
| !! | TTCTGGTTGTGGATTTTATC+AGG | - | tig0024115:6728-6747 | Msa1414380:intergenic | 35.0% |
| CTAAATTACTGAATGCACCT+AGG | + | tig0024115:6752-6771 | Msa1414380:intron | 35.0% | |
| CTCAATAGTAGTCATCTATC+AGG | + | tig0024115:6825-6844 | Msa1414380:intron | 35.0% | |
| !! | TACTGGCTTTATCTTGGTAT+TGG | + | tig0024115:7005-7024 | Msa1414380:CDS | 35.0% |
| !! | ACTGGCTTTATCTTGGTATT+GGG | + | tig0024115:7006-7025 | Msa1414380:CDS | 35.0% |
| TATGGTTATCCTTCCGTATA+AGG | + | tig0024115:7163-7182 | Msa1414380:CDS | 35.0% | |
| AATAACAGGCTGTCCTTATA+CGG | - | tig0024115:7179-7198 | Msa1414380:intergenic | 35.0% | |
| TAGTAGATACTTGCAGCAAT+TGG | + | tig0024115:7202-7221 | Msa1414380:CDS | 35.0% | |
| TCTAGGCAAAGAATATGACT+TGG | + | tig0024115:7235-7254 | Msa1414380:CDS | 35.0% | |
| ! | ATATGACTTGGATGGTAATC+GGG | + | tig0024115:7247-7266 | Msa1414380:CDS | 35.0% |
| CTATGACGTTGATACAAACT+AGG | - | tig0024115:7520-7539 | Msa1414380:intergenic | 35.0% | |
| ! | CTAGTTTGTATCAACGTCAT+AGG | + | tig0024115:7518-7537 | Msa1414380:intron | 35.0% |
| TTTCTTTGCGACATTCATTG+AGG | + | tig0024115:7835-7854 | Msa1414380:CDS | 35.0% | |
| ! | CAGCTTTGTATTCTAATGAC+CGG | + | tig0024115:8087-8106 | Msa1414380:CDS | 35.0% |
| ! | AGCTTTGTATTCTAATGACC+GGG | + | tig0024115:8088-8107 | Msa1414380:CDS | 35.0% |
| AGCATTTATGTTGACAAGTG+AGG | - | tig0024115:8201-8220 | Msa1414380:intergenic | 35.0% | |
| AGTATTAGCACTTCAAAAGC+GGG | + | tig0024115:8469-8488 | Msa1414380:CDS | 35.0% | |
| TTAGATTTGTGGATCTGGTT+TGG | + | tig0024115:8595-8614 | Msa1414380:intron | 35.0% | |
| !! | TGGTTGTATGGGTTTTGATA+AGG | + | tig0024115:8615-8634 | Msa1414380:intron | 35.0% |
| !! | TTGTATGGGTTTTGATAAGG+AGG | + | tig0024115:8618-8637 | Msa1414380:intron | 35.0% |
| !! | TGTATGGGTTTTGATAAGGA+GGG | + | tig0024115:8619-8638 | Msa1414380:intron | 35.0% |
| ! | AATTTTAAGCATCAAGTGGG+AGG | + | tig0024115:8648-8667 | Msa1414380:intron | 35.0% |
| GGAGGCTTTGCAAAAAAAAA+AGG | + | tig0024115:8666-8685 | Msa1414380:intron | 35.0% | |
| GTAACAAATAGCGGTTATTG+TGG | - | tig0024115:8899-8918 | Msa1414380:intergenic | 35.0% | |
| ! | CTGTTGTTTGTAAACCTAGA+TGG | + | tig0024115:9150-9169 | Msa1414380:intron | 35.0% |
| ATCTTCTTCAAGGACAATCT+AGG | + | tig0024115:9202-9221 | Msa1414380:intron | 35.0% | |
| GTAGGATTAGAAATCCTCAT+AGG | - | tig0024115:9231-9250 | Msa1414380:intergenic | 35.0% | |
| !!! | GCCAAACTAGTGACTTTTTT+AGG | + | tig0024115:9297-9316 | Msa1414380:intron | 35.0% |
| GATAACACATCACTAGAACA+AGG | + | tig0024115:9319-9338 | Msa1414380:intron | 35.0% | |
| GCAAGGAAGATGTAATAGTT+TGG | + | tig0024115:9378-9397 | Msa1414380:intron | 35.0% | |
| ! | TAATAGTTTGGTGATCCAAG+CGG | + | tig0024115:9390-9409 | Msa1414380:intron | 35.0% |
| ! | GCATCTACAACAGATTTGTT+CGG | - | tig0024115:9417-9436 | Msa1414380:intergenic | 35.0% |
| !! | ATGCTTGTGTTCTGGAATTA+TGG | + | tig0024115:9433-9452 | Msa1414380:intron | 35.0% |
| !! | TGCTTGTGTTCTGGAATTAT+GGG | + | tig0024115:9434-9453 | Msa1414380:intron | 35.0% |
| TTCAACCTTATCTTGGGAAT+GGG | + | tig0024115:9460-9479 | Msa1414380:intron | 35.0% | |
| TGAGAGAAACCAAAACACAT+TGG | + | tig0024115:9499-9518 | Msa1414380:intron | 35.0% | |
| TTTACAATAAATGGCAAGGC+AGG | + | tig0024115:9630-9649 | Msa1414380:intron | 35.0% | |
| ! | TTTTCTTTTGTCAACGGATC+TGG | - | tig0024115:9677-9696 | Msa1414380:intergenic | 35.0% |
| GTAATTTGACCTCCAAATGA+TGG | - | tig0024115:9750-9769 | Msa1414380:intergenic | 35.0% | |
| !!! | GGCAGTTTAGGTAGTTTTTT+AGG | + | tig0024115:9839-9858 | Msa1414380:intron | 35.0% |
| !!! | TAGGTAGTTTTTTAGGTGGA+TGG | + | tig0024115:9846-9865 | Msa1414380:intron | 35.0% |
| CGTACAATACACTAAAATGG+TGG | - | tig0024115:9991-10010 | Msa1414380:intergenic | 35.0% | |
| CTGCGTACAATACACTAAAA+TGG | - | tig0024115:9994-10013 | Msa1414380:intergenic | 35.0% | |
| CTTGTGTAAAAAACAGGGTA+AGG | - | tig0024115:10017-10036 | Msa1414380:intergenic | 35.0% | |
| !!! | TACCCTGTTTTTTACACAAG+AGG | + | tig0024115:10017-10036 | Msa1414380:intron | 35.0% |
| AGCCTCTTGTGTAAAAAACA+GGG | - | tig0024115:10022-10041 | Msa1414380:intergenic | 35.0% | |
| TAGCCTCTTGTGTAAAAAAC+AGG | - | tig0024115:10023-10042 | Msa1414380:intergenic | 35.0% | |
| !! | TTTGTTATTTGCAAGTAGCC+TGG | - | tig0024115:10049-10068 | Msa1414380:intergenic | 35.0% |
| GGCTACTTGCAAATAACAAA+TGG | + | tig0024115:10049-10068 | Msa1414380:intron | 35.0% | |
| ACTTGCAAATAACAAATGGG+AGG | + | tig0024115:10053-10072 | Msa1414380:intron | 35.0% | |
| CTTGCAAATAACAAATGGGA+GGG | + | tig0024115:10054-10073 | Msa1414380:intron | 35.0% | |
| TAACAAATGGGAGGGAAATA+TGG | + | tig0024115:10062-10081 | Msa1414380:intron | 35.0% | |
| AACAAATGGGAGGGAAATAT+GGG | + | tig0024115:10063-10082 | Msa1414380:intron | 35.0% | |
| GCTATAAGCCGAAAATGAAA+AGG | - | tig0024115:10124-10143 | Msa1414380:intergenic | 35.0% | |
| ! | TTCATTTTCGGCTTATAGCT+TGG | + | tig0024115:10125-10144 | Msa1414380:intron | 35.0% |
| TCAATTGTCAATGGTTCAAC+AGG | - | tig0024115:10311-10330 | Msa1414380:intergenic | 35.0% | |
| GCTACTTCTTCAATTGTCAA+TGG | - | tig0024115:10320-10339 | Msa1414380:intergenic | 35.0% | |
| !! | TTCTGAAATGTGGATTTCAC+TGG | - | tig0024115:10658-10677 | Msa1414380:intergenic | 35.0% |
| AAATAGTAGTTGGTTGGGTT+TGG | + | tig0024115:10798-10817 | Msa1414380:three_prime_UTR | 35.0% | |
| ! | TTGGGTTTGGTTATCTGAAA+AGG | + | tig0024115:10811-10830 | Msa1414380:three_prime_UTR | 35.0% |
| ! | GACCTCTCATATTTTCCATT+TGG | - | tig0024115:10869-10888 | Msa1414380:intergenic | 35.0% |
| AAATATGAGAGGTCACGTAA+TGG | + | tig0024115:10875-10894 | Msa1414380:three_prime_UTR | 35.0% | |
| TGATCAAACAATCCACAAGT+TGG | - | tig0024115:10911-10930 | Msa1414380:intergenic | 35.0% | |
| ! | TTGGAATAGAGGATGCGTTT+TGG | - | tig0024115:1261-1280 | None:intergenic | 40.0% |
| !! | CAAGGAGATTGGTTTGTATC+TGG | + | tig0024115:1465-1484 | Msa1414380:CDS | 40.0% |
| GCTATGGAGGATCTTGAAAA+AGG | + | tig0024115:1559-1578 | Msa1414380:CDS | 40.0% | |
| TTTGCTGATGATATCGTCTC+TGG | + | tig0024115:1703-1722 | Msa1414380:intron | 40.0% | |
| TGATGATATCGTCTCTGGTA+AGG | + | tig0024115:1708-1727 | Msa1414380:intron | 40.0% | |
| CTACTAAAATCAACTCGGCT+CGG | - | tig0024115:1777-1796 | Msa1414380:intergenic | 40.0% | |
| GGACATGCATTGTTATATCC+AGG | + | tig0024115:1900-1919 | Msa1414380:intron | 40.0% | |
| TAAGGTGAATTCTTGCCACT+AGG | + | tig0024115:1941-1960 | Msa1414380:intron | 40.0% | |
| !!! | TTTTTTGTCTGGTAGCCTAG+TGG | - | tig0024115:1959-1978 | Msa1414380:intergenic | 40.0% |
| AAGGTCTAGTGATCGAATTC+TGG | + | tig0024115:2181-2200 | Msa1414380:intron | 40.0% | |
| TAGTGATCGAATTCTGGCAA+GGG | + | tig0024115:2187-2206 | Msa1414380:intron | 40.0% | |
| ! | TGTTGTTTATGTGGGAGTTG+TGG | + | tig0024115:2768-2787 | Msa1414380:intron | 40.0% |
| !! | GAGTTGTGGATTTGTTGATG+TGG | + | tig0024115:2782-2801 | Msa1414380:intron | 40.0% |
| !! | TGGATTTGTTGATGTGGTTG+TGG | + | tig0024115:2788-2807 | Msa1414380:intron | 40.0% |
| !!! | TTGTGGTTGTGGTTTTGGTT+TGG | + | tig0024115:2805-2824 | Msa1414380:intron | 40.0% |
| TATCTGAGTAAACCTTCCCT+CGG | - | tig0024115:2853-2872 | Msa1414380:intergenic | 40.0% | |
| CAGATACTTTCTGTTGGGAT+TGG | + | tig0024115:2867-2886 | Msa1414380:CDS | 40.0% | |
| ATACTTTCTGTTGGGATTGG+AGG | + | tig0024115:2870-2889 | Msa1414380:CDS | 40.0% | |
| ATAGCATCCATTACCTTGAG+TGG | - | tig0024115:2948-2967 | Msa1414380:intergenic | 40.0% | |
| AATGATACATACACACCCGT+CGG | + | tig0024115:3061-3080 | Msa1414380:intron | 40.0% | |
| CACTGACAAAACAATCGTAC+AGG | - | tig0024115:3268-3287 | Msa1414380:intergenic | 40.0% | |
| !! | GTACGATTGTTTTGTCAGTG+AGG | + | tig0024115:3268-3287 | Msa1414380:intron | 40.0% |
| GACTGAAGAAACGAGAGTTA+GGG | + | tig0024115:3653-3672 | Msa1414380:intron | 40.0% | |
| !! | GTTTCTAGCAATCCTCAGTT+TGG | - | tig0024115:3680-3699 | Msa1414380:intergenic | 40.0% |
| CTTATTAGGTGACATCAACG+TGG | - | tig0024115:3790-3809 | Msa1414380:intergenic | 40.0% | |
| GATCATCAGATTGCACAACT+CGG | + | tig0024115:4029-4048 | Msa1414380:CDS | 40.0% | |
| TTGATCTATCTTCAGAGTGG+AGG | + | tig0024115:4437-4456 | Msa1414380:intron | 40.0% | |
| !! | ACAAGCCATTTCTAGTCTCA+GGG | - | tig0024115:4466-4485 | Msa1414380:intergenic | 40.0% |
| !! | AACAAGCCATTTCTAGTCTC+AGG | - | tig0024115:4467-4486 | Msa1414380:intergenic | 40.0% |
| ATTCAATCCTGCTTCACGAA+AGG | - | tig0024115:4504-4523 | Msa1414380:intergenic | 40.0% | |
| CCCAAAACAGGTTTAATCTC+AGG | + | tig0024115:4526-4545 | Msa1414380:intron | 40.0% | |
| AACTATTCAGGTGAAGAGTG+TGG | + | tig0024115:4707-4726 | Msa1414380:intron | 40.0% | |
| CACAGATGTGCTAGTCATAT+AGG | - | tig0024115:4882-4901 | Msa1414380:intergenic | 40.0% | |
| GGATAATACTGCCAGAATTG+AGG | + | tig0024115:4953-4972 | Msa1414380:CDS | 40.0% | |
| CTAGATTTCCCATGTTTGAC+TGG | + | tig0024115:4985-5004 | Msa1414380:CDS | 40.0% | |
| ACAACACTTAAACGTGGACA+AGG | - | tig0024115:5362-5381 | Msa1414380:intergenic | 40.0% | |
| GCATCAACAACACTTAAACG+TGG | - | tig0024115:5368-5387 | Msa1414380:intergenic | 40.0% | |
| GGGAAAGATGGAAACAAATG+GGG | - | tig0024115:5490-5509 | Msa1414380:intergenic | 40.0% | |
| GATAAGGGTTTATGGTAGGT+GGG | + | tig0024115:5633-5652 | Msa1414380:intron | 40.0% | |
| AAAGTAAGGAGAGGAATGGT+TGG | + | tig0024115:5719-5738 | Msa1414380:intron | 40.0% | |
| !! | TACCTCTGTGATTGGTTTCT+TGG | + | tig0024115:5827-5846 | Msa1414380:intron | 40.0% |
| ATCCAAGAAACCAATCACAG+AGG | - | tig0024115:5832-5851 | Msa1414380:intergenic | 40.0% | |
| AAAACCAATGTGTGATGCGT+AGG | - | tig0024115:5942-5961 | Msa1414380:intergenic | 40.0% | |
| TCACAATCAAGGTCTCATAC+TGG | + | tig0024115:5968-5987 | Msa1414380:intron | 40.0% | |
| AGCTACAGCATAAAAGAGCT+AGG | + | tig0024115:6069-6088 | Msa1414380:intron | 40.0% | |
| TATATCTAGTCTAGTCGGTG+TGG | + | tig0024115:6194-6213 | Msa1414380:intron | 40.0% | |
| ATATCTAGTCTAGTCGGTGT+GGG | + | tig0024115:6195-6214 | Msa1414380:intron | 40.0% | |
| TCATTGTGTTGGATGTGAGA+CGG | - | tig0024115:6230-6249 | Msa1414380:intergenic | 40.0% | |
| TCTCACATCCAACACAATGA+AGG | + | tig0024115:6230-6249 | Msa1414380:intron | 40.0% | |
| ! | ACCTCTAGCCACCTTAATTT+TGG | - | tig0024115:6290-6309 | Msa1414380:intergenic | 40.0% |
| AAAATTAAGGTGGCTAGAGG+TGG | + | tig0024115:6289-6308 | Msa1414380:intron | 40.0% | |
| AAATTAAGGTGGCTAGAGGT+GGG | + | tig0024115:6290-6309 | Msa1414380:intron | 40.0% | |
| AGAGGTGGGTATCACAATTA+AGG | + | tig0024115:6304-6323 | Msa1414380:intron | 40.0% | |
| TTGCCAACATATTCACACCT+AGG | + | tig0024115:6331-6350 | Msa1414380:intron | 40.0% | |
| TAGCCTAGGTGTGAATATGT+TGG | - | tig0024115:6337-6356 | Msa1414380:intergenic | 40.0% | |
| ACATATTCACACCTAGGCTA+TGG | + | tig0024115:6337-6356 | Msa1414380:intron | 40.0% | |
| CATATTCACACCTAGGCTAT+GGG | + | tig0024115:6338-6357 | Msa1414380:intron | 40.0% | |
| !! | ATCGTCTTCAACTTTGGGAT+AGG | + | tig0024115:6416-6435 | Msa1414380:intron | 40.0% |
| !! | TCGTCTTCAACTTTGGGATA+GGG | + | tig0024115:6417-6436 | Msa1414380:intron | 40.0% |
| CCAATAGTGCTTATAAGGCT+TGG | - | tig0024115:6461-6480 | Msa1414380:intergenic | 40.0% | |
| ! | CCAAGCCTTATAAGCACTAT+TGG | + | tig0024115:6458-6477 | Msa1414380:intron | 40.0% |
| TCACCCCAATAGTGCTTATA+AGG | - | tig0024115:6466-6485 | Msa1414380:intergenic | 40.0% | |
| ACTATTGGGGTGATATCTCT+TGG | + | tig0024115:6473-6492 | Msa1414380:intron | 40.0% | |
| TCATTGTGCTAGATGTGAAG+GGG | - | tig0024115:6518-6537 | Msa1414380:intergenic | 40.0% | |
| CTTCATTGTGCTAGATGTGA+AGG | - | tig0024115:6520-6539 | Msa1414380:intergenic | 40.0% | |
| TAGCACAATGAAGATGCTGT+AGG | + | tig0024115:6527-6546 | Msa1414380:intron | 40.0% | |
| !! | ACCTTTGGAGTGACAACTTT+GGG | - | tig0024115:6568-6587 | Msa1414380:intergenic | 40.0% |
| CCTCCTGATTCTAAACCTTA+TGG | - | tig0024115:6648-6667 | Msa1414380:intergenic | 40.0% | |
| ! | CCATAAGGTTTAGAATCAGG+AGG | + | tig0024115:6645-6664 | Msa1414380:intron | 40.0% |
| ! | TTGTGGATTTTATCAGGGCT+TGG | - | tig0024115:6722-6741 | Msa1414380:intergenic | 40.0% |
| GAATAATCCTGCAGCTTTAC+TGG | + | tig0024115:6988-7007 | Msa1414380:CDS | 40.0% | |
| !! | CAGCTTTACTGGCTTTATCT+TGG | + | tig0024115:6999-7018 | Msa1414380:CDS | 40.0% |
| GGAAGGATAACCATATCCTT+AGG | - | tig0024115:7158-7177 | Msa1414380:intergenic | 40.0% | |
| ATACTTGCAGCAATTGGTCA+TGG | + | tig0024115:7208-7227 | Msa1414380:CDS | 40.0% | |
| CAATTGGTCATGGAATCTCT+AGG | + | tig0024115:7218-7237 | Msa1414380:CDS | 40.0% | |
| ! | GGCAAAGAATATGACTTGGA+TGG | + | tig0024115:7239-7258 | Msa1414380:CDS | 40.0% |
| TCAGAAGTTAATGACATCCC+AGG | - | tig0024115:7477-7496 | Msa1414380:intergenic | 40.0% | |
| TTTGTATCAACGTCATAGGG+TGG | + | tig0024115:7522-7541 | Msa1414380:intron | 40.0% | |
| ACAGATACATTCAGCAACTG+AGG | + | tig0024115:7798-7817 | Msa1414380:intron | 40.0% | |
| CAGATACATTCAGCAACTGA+GGG | + | tig0024115:7799-7818 | Msa1414380:intron | 40.0% | |
| TCGTTCATACAGTGCAACAA+GGG | - | tig0024115:8162-8181 | Msa1414380:intergenic | 40.0% | |
| ATAAATGCTTATCACCAGCC+TGG | + | tig0024115:8212-8231 | Msa1414380:CDS | 40.0% | |
| AGAAAATATGCTTACCAGGC+TGG | - | tig0024115:8229-8248 | Msa1414380:intergenic | 40.0% | |
| AATCAATTAGGTGTGGAAGC+TGG | + | tig0024115:8428-8447 | Msa1414380:intron | 40.0% | |
| TCAGACGTGTCTTAGATTTG+TGG | + | tig0024115:8584-8603 | Msa1414380:intron | 40.0% | |
| GTGTCTTAGATTTGTGGATC+TGG | + | tig0024115:8590-8609 | Msa1414380:intron | 40.0% | |
| !! | TGGATCTGGTTTGGTTGTAT+GGG | + | tig0024115:8604-8623 | Msa1414380:intron | 40.0% |
| !! | GTATGGGTTTTGATAAGGAG+GGG | + | tig0024115:8620-8639 | Msa1414380:intron | 40.0% |
| !! | TATGGGTTTTGATAAGGAGG+GGG | + | tig0024115:8621-8640 | Msa1414380:intron | 40.0% |
| GGTTTCAATGTTGTCAATCG+TGG | + | tig0024115:8740-8759 | Msa1414380:intron | 40.0% | |
| GTTGTAGTACTGTAGCATAG+TGG | - | tig0024115:8795-8814 | Msa1414380:intergenic | 40.0% | |
| AGCATATCACGGAACAATAG+CGG | + | tig0024115:8845-8864 | Msa1414380:intron | 40.0% | |
| ! | TTTGTGTTTTCATTGGCGAG+AGG | + | tig0024115:9121-9140 | Msa1414380:intron | 40.0% |
| ! | TTGTGTTTTCATTGGCGAGA+GGG | + | tig0024115:9122-9141 | Msa1414380:intron | 40.0% |
| TCACTAGAACAAGGAGTTTG+AGG | + | tig0024115:9328-9347 | Msa1414380:intron | 40.0% | |
| ! | TAGAACAAGGAGTTTGAGGT+TGG | + | tig0024115:9332-9351 | Msa1414380:intron | 40.0% |
| !! | AAGGAGTTTGAGGTTGGTTT+AGG | + | tig0024115:9338-9357 | Msa1414380:intron | 40.0% |
| !! | AGGAGTTTGAGGTTGGTTTA+GGG | + | tig0024115:9339-9358 | Msa1414380:intron | 40.0% |
| ! | AATAGTTTGGTGATCCAAGC+GGG | + | tig0024115:9391-9410 | Msa1414380:intron | 40.0% |
| TGTTGTAGATGCTTGTGTTC+TGG | + | tig0024115:9425-9444 | Msa1414380:intron | 40.0% | |
| !! | GCTTGTGTTCTGGAATTATG+GGG | + | tig0024115:9435-9454 | Msa1414380:intron | 40.0% |
| !! | CTTGTGTTCTGGAATTATGG+GGG | + | tig0024115:9436-9455 | Msa1414380:intron | 40.0% |
| CTTCAACCTTATCTTGGGAA+TGG | + | tig0024115:9459-9478 | Msa1414380:intron | 40.0% | |
| TACTACCCATTCCCAAGATA+AGG | - | tig0024115:9468-9487 | Msa1414380:intergenic | 40.0% | |
| AACCAAAACACATTGGACCA+AGG | + | tig0024115:9506-9525 | Msa1414380:intron | 40.0% | |
| ! | TACCTTGGTCCAATGTGTTT+TGG | - | tig0024115:9511-9530 | Msa1414380:intergenic | 40.0% |
| ! | ATTTTCTCCTTTCTGCCTTG+AGG | + | tig0024115:9812-9831 | Msa1414380:intron | 40.0% |
| !!! | AGTTTTTTAGGTGGATGGTC+CGG | + | tig0024115:9851-9870 | Msa1414380:intron | 40.0% |
| ! | TTACACAAGAGGCTATTTCC+AGG | + | tig0024115:10028-10047 | Msa1414380:intron | 40.0% |
| ACAAATGGGAGGGAAATATG+GGG | + | tig0024115:10064-10083 | Msa1414380:intron | 40.0% | |
| ATATTGACCATGCTGTTCGT+AGG | - | tig0024115:10174-10193 | Msa1414380:intergenic | 40.0% | |
| TACAGAAACATTGTCCCGTT+AGG | + | tig0024115:10241-10260 | Msa1414380:intron | 40.0% | |
| ! | GGCGAATGTTTTACATCTTC+TGG | - | tig0024115:10359-10378 | Msa1414380:intergenic | 40.0% |
| ATTAATATAGGGGAGCAGTG+AGG | - | tig0024115:10380-10399 | Msa1414380:intergenic | 40.0% | |
| CTAATTGCTGAAGGTAACTG+TGG | + | tig0024115:10565-10584 | Msa1414380:CDS | 40.0% | |
| AGAAAAACTTTGACGCTCCT+TGG | - | tig0024115:10595-10614 | Msa1414380:intergenic | 40.0% | |
| !!! | AGGAGCGTCAAAGTTTTTCT+CGG | + | tig0024115:10595-10614 | Msa1414380:CDS | 40.0% |
| GTGTTCAGATACCCATCAAA+AGG | + | tig0024115:10688-10707 | Msa1414380:three_prime_UTR | 40.0% | |
| !! | GCTGCTTTCTTCCTTTTGAT+GGG | - | tig0024115:10702-10721 | Msa1414380:intergenic | 40.0% |
| !! | AGCTGCTTTCTTCCTTTTGA+TGG | - | tig0024115:10703-10722 | Msa1414380:intergenic | 40.0% |
| TCAAAAGGAAGAAAGCAGCT+TGG | + | tig0024115:10703-10722 | Msa1414380:three_prime_UTR | 40.0% | |
| ACGACGTCGTATTGGAATAG+AGG | - | tig0024115:1272-1291 | None:intergenic | 45.0% | |
| TGTTGTGAACGACGTCGTAT+TGG | - | tig0024115:1280-1299 | None:intergenic | 45.0% | |
| ! | TGGGTCGGGTTTGGTATATA+GGG | - | tig0024115:1306-1325 | None:intergenic | 45.0% |
| ! | TTGGGTCGGGTTTGGTATAT+AGG | - | tig0024115:1307-1326 | None:intergenic | 45.0% |
| ! | GTGGTGATTTGTGGATTGCA+CGG | - | tig0024115:1386-1405 | Msa1414380:intergenic | 45.0% |
| AAATCACCACCGTCTTGAGA+AGG | + | tig0024115:1396-1415 | Msa1414380:CDS | 45.0% | |
| CTATACCAGCACAAGGAGAT+TGG | + | tig0024115:1454-1473 | Msa1414380:CDS | 45.0% | |
| ACAAACCAATCTCCTTGTGC+TGG | - | tig0024115:1462-1481 | Msa1414380:intergenic | 45.0% | |
| GTTTGTATCTGGATGTGAGC+CGG | + | tig0024115:1476-1495 | Msa1414380:CDS | 45.0% | |
| TTTGTATCTGGATGTGAGCC+GGG | + | tig0024115:1477-1496 | Msa1414380:CDS | 45.0% | |
| CGATTGCGAATCCTGATGAA+GGG | + | tig0024115:1584-1603 | Msa1414380:CDS | 45.0% | |
| ! | GACATGCATAGCAGTTGGTA+AGG | + | tig0024115:1923-1942 | Msa1414380:intron | 45.0% |
| ! | TACTGGTTAGGACTATGACG+TGG | + | tig0024115:2117-2136 | Msa1414380:intron | 45.0% |
| CTAGTGATCGAATTCTGGCA+AGG | + | tig0024115:2186-2205 | Msa1414380:intron | 45.0% | |
| TGTTGATGTGGTTGTGGTTG+TGG | + | tig0024115:2794-2813 | Msa1414380:intron | 45.0% | |
| ! | TGTGGTTGTGGTTGTGGTTT+TGG | + | tig0024115:2800-2819 | Msa1414380:intron | 45.0% |
| ATCTGAGTAAACCTTCCCTC+GGG | - | tig0024115:2852-2871 | Msa1414380:intergenic | 45.0% | |
| CAATCCTCCACTCAAGGTAA+TGG | + | tig0024115:2938-2957 | Msa1414380:intron | 45.0% | |
| GGACTGAAGAAACGAGAGTT+AGG | + | tig0024115:3652-3671 | Msa1414380:intron | 45.0% | |
| ACAATGTGGGTCCTACACTT+TGG | + | tig0024115:3736-3755 | Msa1414380:intron | 45.0% | |
| ! | TGGGTCCTACACTTTGGAAA+TGG | + | tig0024115:3742-3761 | Msa1414380:intron | 45.0% |
| ! | GGGTCCTACACTTTGGAAAT+GGG | + | tig0024115:3743-3762 | Msa1414380:intron | 45.0% |
| !! | GATAGCACAAGAGAAGTGCT+AGG | - | tig0024115:3839-3858 | Msa1414380:intergenic | 45.0% |
| ATGATCAATGCCAGCAGGAT+CGG | - | tig0024115:4015-4034 | Msa1414380:intergenic | 45.0% | |
| ATCTGATGATCAATGCCAGC+AGG | - | tig0024115:4020-4039 | Msa1414380:intergenic | 45.0% | |
| !! | CAAGCCATTTCTAGTCTCAG+GGG | - | tig0024115:4465-4484 | Msa1414380:intergenic | 45.0% |
| ATACTGCCAGAATTGAGGGA+TGG | + | tig0024115:4958-4977 | Msa1414380:CDS | 45.0% | |
| AGCTAACCATCCCTCAATTC+TGG | - | tig0024115:4967-4986 | Msa1414380:intergenic | 45.0% | |
| TTTCCCATGTTTGACTGGGT+AGG | + | tig0024115:4990-5009 | Msa1414380:CDS | 45.0% | |
| CAGTCACGAAAAGGGAAAGA+TGG | - | tig0024115:5502-5521 | Msa1414380:intergenic | 45.0% | |
| GGATAAGGGTTTATGGTAGG+TGG | + | tig0024115:5632-5651 | Msa1414380:intron | 45.0% | |
| !! | ATGGTAGGTGGGTTACTGAT+AGG | + | tig0024115:5644-5663 | Msa1414380:intron | 45.0% |
| TAGGCATTTGCAAGCAATGC+AGG | + | tig0024115:5663-5682 | Msa1414380:intron | 45.0% | |
| CAGGTGCTCAGGATTTGATA+GGG | + | tig0024115:5682-5701 | Msa1414380:intron | 45.0% | |
| GGTCAAAGTAAGGAGAGGAA+TGG | + | tig0024115:5715-5734 | Msa1414380:intron | 45.0% | |
| !! | AGGAGAGGAATGGTTGGTAA+TGG | + | tig0024115:5725-5744 | Msa1414380:intron | 45.0% |
| !! | AGAGGAATGGTTGGTAATGG+TGG | + | tig0024115:5728-5747 | Msa1414380:intron | 45.0% |
| !! | GAGGAATGGTTGGTAATGGT+GGG | + | tig0024115:5729-5748 | Msa1414380:intron | 45.0% |
| !! | AATGGTTGGTAATGGTGGGT+TGG | + | tig0024115:5733-5752 | Msa1414380:intron | 45.0% |
| ATGTGGCTGAAGGGTTCAAT+TGG | + | tig0024115:5780-5799 | Msa1414380:intron | 45.0% | |
| GAAACCTACGCATCACACAT+TGG | + | tig0024115:5935-5954 | Msa1414380:intron | 45.0% | |
| TATCTCAGAATTTGGGCGCA+AGG | + | tig0024115:6099-6118 | Msa1414380:intron | 45.0% | |
| GCCAAAATTAAGGTGGCTAG+AGG | + | tig0024115:6286-6305 | Msa1414380:intron | 45.0% | |
| CTTGGAGTCCTGCTTATGTT+AGG | - | tig0024115:6443-6462 | Msa1414380:intergenic | 45.0% | |
| GATGCTGTAGGTTGCAATGA+AGG | + | tig0024115:6539-6558 | Msa1414380:intron | 45.0% | |
| !! | CACCTTTGGAGTGACAACTT+TGG | - | tig0024115:6569-6588 | Msa1414380:intergenic | 45.0% |
| CAAAGTTGTCACTCCAAAGG+TGG | + | tig0024115:6567-6586 | Msa1414380:intron | 45.0% | |
| GTTATTGACAGGAGAGCCTT+AGG | - | tig0024115:6951-6970 | Msa1414380:intergenic | 45.0% | |
| GATAAAGCCAGTAAAGCTGC+AGG | - | tig0024115:6998-7017 | Msa1414380:intergenic | 45.0% | |
| ! | TCTTGGTATTGGGCTACAGA+TGG | + | tig0024115:7016-7035 | Msa1414380:CDS | 45.0% |
| TATTGGGCTACAGATGGTGT+AGG | + | tig0024115:7022-7041 | Msa1414380:CDS | 45.0% | |
| ATTGGGCTACAGATGGTGTA+GGG | + | tig0024115:7023-7042 | Msa1414380:CDS | 45.0% | |
| TCACCTTCTTGCATTCTACC+TGG | + | tig0024115:7456-7475 | Msa1414380:intron | 45.0% | |
| CACCTTCTTGCATTCTACCT+GGG | + | tig0024115:7457-7476 | Msa1414380:intron | 45.0% | |
| ATCCCAGGTAGAATGCAAGA+AGG | - | tig0024115:7462-7481 | Msa1414380:intergenic | 45.0% | |
| TACATTCAGCAACTGAGGGA+AGG | + | tig0024115:7803-7822 | Msa1414380:CDS | 45.0% | |
| ! | CTTGAACCAGGTGTTACATG+TGG | + | tig0024115:7893-7912 | Msa1414380:CDS | 45.0% |
| TAGTCACCACATGTAACACC+TGG | - | tig0024115:7902-7921 | Msa1414380:intergenic | 45.0% | |
| ACATGTGGTGACTACCTGTT+TGG | + | tig0024115:7908-7927 | Msa1414380:CDS | 45.0% | |
| CTACCTGTTTGGTATGCTAC+AGG | + | tig0024115:7919-7938 | Msa1414380:CDS | 45.0% | |
| AGACCTGTAGCATACCAAAC+AGG | - | tig0024115:7925-7944 | Msa1414380:intergenic | 45.0% | |
| AAAGAATGGCGGTGGTTAGT+TGG | + | tig0024115:8009-8028 | Msa1414380:intron | 45.0% | |
| CAATGTTTCCACAGGGAACA+AGG | + | tig0024115:8063-8082 | Msa1414380:intron | 45.0% | |
| !! | TCGAGGTGTTACTTCTTGCA+CGG | - | tig0024115:8129-8148 | Msa1414380:intergenic | 45.0% |
| GAAGTAACACCTCGATCAGT+TGG | + | tig0024115:8134-8153 | Msa1414380:CDS | 45.0% | |
| CTCGTTCATACAGTGCAACA+AGG | - | tig0024115:8163-8182 | Msa1414380:intergenic | 45.0% | |
| CACTGTATGAACGAGCAGTT+GGG | + | tig0024115:8168-8187 | Msa1414380:CDS | 45.0% | |
| TGTGGAAGCTGGTAAGAAAG+CGG | + | tig0024115:8439-8458 | Msa1414380:CDS | 45.0% | |
| !! | GTGGATCTGGTTTGGTTGTA+TGG | + | tig0024115:8603-8622 | Msa1414380:intron | 45.0% |
| AGGGAAGGAGAGTTAGTTAG+AGG | + | tig0024115:8686-8705 | Msa1414380:intron | 45.0% | |
| TCGTGGATCGCGAAAAATAG+TGG | + | tig0024115:8757-8776 | Msa1414380:intron | 45.0% | |
| ! | TGTGTTTTCATTGGCGAGAG+GGG | + | tig0024115:9123-9142 | Msa1414380:intron | 45.0% |
| ! | GACAATCTAGGATGCCTATG+AGG | + | tig0024115:9214-9233 | Msa1414380:intron | 45.0% |
| ATCTTCCTTGCGAAAGACAC+TGG | - | tig0024115:9369-9388 | Msa1414380:intergenic | 45.0% | |
| ACTGAAGCTCGTGATTACCT+TGG | - | tig0024115:9526-9545 | Msa1414380:intergenic | 45.0% | |
| ATCACGAGCTTCAGTCATGA+CGG | + | tig0024115:9531-9550 | Msa1414380:intron | 45.0% | |
| !! | TTGTTGCTTTGGAAGCAGTG+TGG | - | tig0024115:9608-9627 | Msa1414380:intergenic | 45.0% |
| GATCTGGTACTCTCAGTAAC+TGG | - | tig0024115:9661-9680 | Msa1414380:intergenic | 45.0% | |
| ! | TTACTGACTGGGCCATCATT+TGG | + | tig0024115:9735-9754 | Msa1414380:intron | 45.0% |
| TTGGAGGTCAAATTACACCC+AGG | + | tig0024115:9754-9773 | Msa1414380:intron | 45.0% | |
| ATTACACCCAGGAAGTAACG+AGG | + | tig0024115:9765-9784 | Msa1414380:intron | 45.0% | |
| TTACACCCAGGAAGTAACGA+GGG | + | tig0024115:9766-9785 | Msa1414380:intron | 45.0% | |
| ! | TGGTCCGGTTGGTTATAAGA+AGG | + | tig0024115:9866-9885 | Msa1414380:intron | 45.0% |
| ! | GGTCCGGTTGGTTATAAGAA+GGG | + | tig0024115:9867-9886 | Msa1414380:intron | 45.0% |
| ! | GTCCGGTTGGTTATAAGAAG+GGG | + | tig0024115:9868-9887 | Msa1414380:intron | 45.0% |
| GTCCCCTTCTTATAACCAAC+CGG | - | tig0024115:9873-9892 | Msa1414380:intergenic | 45.0% | |
| ATAAGAAGGGGACAGATCAG+TGG | + | tig0024115:9880-9899 | Msa1414380:intron | 45.0% | |
| GGAAAGACTGGAAAGTGATG+TGG | - | tig0024115:10153-10172 | Msa1414380:intergenic | 45.0% | |
| ATGCTGTTCGTAGGAAAGAC+TGG | - | tig0024115:10165-10184 | Msa1414380:intergenic | 45.0% | |
| AGTCTTTCCTACGAACAGCA+TGG | + | tig0024115:10164-10183 | Msa1414380:intron | 45.0% | |
| CAGTTAAGGATGGACCTAAC+GGG | - | tig0024115:10258-10277 | Msa1414380:intergenic | 45.0% | |
| GCAGTTAAGGATGGACCTAA+CGG | - | tig0024115:10259-10278 | Msa1414380:intergenic | 45.0% | |
| !!! | GTTTTACATCTTCTGGAGCG+TGG | - | tig0024115:10352-10371 | Msa1414380:intergenic | 45.0% |
| AGCAATTAGTGCTCTGTCGT+TGG | - | tig0024115:10554-10573 | Msa1414380:intergenic | 45.0% | |
| ! | GACAGAGCACTAATTGCTGA+AGG | + | tig0024115:10556-10575 | Msa1414380:CDS | 45.0% |
| AAGGTAACTGTGGTTCTCCA+AGG | + | tig0024115:10575-10594 | Msa1414380:CDS | 45.0% | |
| GGAATAAGCTGACCAACTTG+TGG | + | tig0024115:10896-10915 | Msa1414380:three_prime_UTR | 45.0% | |
| !!! | AAATTAAATTCTTTTTATTA+AGG | + | tig0024115:2627-2646 | Msa1414380:intron | 5.0% |
| !!! | TATTAAATTTTTTAAAAGAA+TGG | + | tig0024115:7995-8014 | Msa1414380:intron | 5.0% |
| !! | TAAATAACAAATAAAAAAAA+GGG | + | tig0024115:9916-9935 | Msa1414380:intron | 5.0% |
| !! | TAATTGAAAAAATTAATATA+GGG | - | tig0024115:10391-10410 | Msa1414380:intergenic | 5.0% |
| !! | TTAATTGAAAAAATTAATAT+AGG | - | tig0024115:10392-10411 | Msa1414380:intergenic | 5.0% |
| ! | GTGATTTGTGGATTGCACGG+CGG | - | tig0024115:1383-1402 | Msa1414380:intergenic | 50.0% |
| CTCAAGACGGTGGTGATTTG+TGG | - | tig0024115:1395-1414 | Msa1414380:intergenic | 50.0% | |
| CACGTGGATCCTTCTCAAGA+CGG | - | tig0024115:1408-1427 | Msa1414380:intergenic | 50.0% | |
| AGAAGGATCCACGTGCTCTA+TGG | + | tig0024115:1413-1432 | Msa1414380:CDS | 50.0% | |
| ACTCATCTGTAAACCCGACC+CGG | - | tig0024115:1498-1517 | Msa1414380:intergenic | 50.0% | |
| TTGTGAAGGAAATGGAGCCG+AGG | + | tig0024115:1518-1537 | Msa1414380:CDS | 50.0% | |
| GCGATTGCGAATCCTGATGA+AGG | + | tig0024115:1583-1602 | Msa1414380:CDS | 50.0% | |
| ! | GAATCCTGATGAAGGGCGTA+TGG | + | tig0024115:1591-1610 | Msa1414380:CDS | 50.0% |
| ! | CTGATGAAGGGCGTATGGTT+GGG | + | tig0024115:1596-1615 | Msa1414380:CDS | 50.0% |
| !! | TGGTTGGGCATTACTGGCTT+AGG | + | tig0024115:1611-1630 | Msa1414380:CDS | 50.0% |
| !! | GGTTGGGCATTACTGGCTTA+GGG | + | tig0024115:1612-1631 | Msa1414380:CDS | 50.0% |
| TGCCAACTACTATGCTCACG+CGG | - | tig0024115:1879-1898 | Msa1414380:intergenic | 50.0% | |
| CGTGAGCATAGTAGTTGGCA+GGG | + | tig0024115:1879-1898 | Msa1414380:intron | 50.0% | |
| !! | TGGACCACAGTTTGTTGCAG+AGG | + | tig0024115:2902-2921 | Msa1414380:CDS | 50.0% |
| AGTGCCTCTGCAACAAACTG+TGG | - | tig0024115:2909-2928 | Msa1414380:intergenic | 50.0% | |
| TCCTGACAATCCTCCACTCA+AGG | + | tig0024115:2932-2951 | Msa1414380:CDS | 50.0% | |
| ACCTTGAGTGGAGGATTGTC+AGG | - | tig0024115:2936-2955 | Msa1414380:intergenic | 50.0% | |
| GCATCCATTACCTTGAGTGG+AGG | - | tig0024115:2945-2964 | Msa1414380:intergenic | 50.0% | |
| GAGAGTTAGGGTCCAAACTG+AGG | + | tig0024115:3665-3684 | Msa1414380:intron | 50.0% | |
| GGGACCCATTTCCAAAGTGT+AGG | - | tig0024115:3750-3769 | Msa1414380:intergenic | 50.0% | |
| GAAATGGGTCCCACACAAAG+AGG | + | tig0024115:3758-3777 | Msa1414380:intron | 50.0% | |
| TGGGTCCAACCTCTTTGTGT+GGG | - | tig0024115:3770-3789 | Msa1414380:intergenic | 50.0% | |
| TGGGACCTCACATCATGCTT+TGG | + | tig0024115:3959-3978 | Msa1414380:intron | 50.0% | |
| ATTGACAACACCGATCCTGC+TGG | + | tig0024115:4002-4021 | Msa1414380:CDS | 50.0% | |
| !! | CAAGTGTCGAAGCTAGCTCA+GGG | - | tig0024115:4055-4074 | Msa1414380:intergenic | 50.0% |
| !! | ACAAGTGTCGAAGCTAGCTC+AGG | - | tig0024115:4056-4075 | Msa1414380:intergenic | 50.0% |
| CAAAAGGCCTTTCGTGAAGC+AGG | + | tig0024115:4494-4513 | Msa1414380:CDS | 50.0% | |
| CCTCCTACCCAGTCAAACAT+GGG | - | tig0024115:4996-5015 | Msa1414380:intergenic | 50.0% | |
| ACCTCCTACCCAGTCAAACA+TGG | - | tig0024115:4997-5016 | Msa1414380:intergenic | 50.0% | |
| ! | CGCTGATGGATGAGGCAAAT+AGG | + | tig0024115:5175-5194 | Msa1414380:CDS | 50.0% |
| TGAGGCAAATAGGACTACCG+TGG | + | tig0024115:5185-5204 | Msa1414380:CDS | 50.0% | |
| GCAGGTGCTCAGGATTTGAT+AGG | + | tig0024115:5681-5700 | Msa1414380:intron | 50.0% | |
| TGGCTGAAGGGTTCAATTGG+TGG | + | tig0024115:5783-5802 | Msa1414380:intron | 50.0% | |
| ! | GGGTTCAATTGGTGGCTATG+TGG | + | tig0024115:5791-5810 | Msa1414380:intron | 50.0% |
| AATGCAGGTGGGCCAACAAT+GGG | + | tig0024115:6375-6394 | Msa1414380:intron | 50.0% | |
| GGATAGGGCCTAACATAAGC+AGG | + | tig0024115:6432-6451 | Msa1414380:intron | 50.0% | |
| GCCCAAAGTTGTCACTCCAA+AGG | + | tig0024115:6564-6583 | Msa1414380:intron | 50.0% | |
| TGTCACTCCAAAGGTGGCTA+AGG | + | tig0024115:6573-6592 | Msa1414380:intron | 50.0% | |
| GTCACTCCAAAGGTGGCTAA+GGG | + | tig0024115:6574-6593 | Msa1414380:intron | 50.0% | |
| !! | CTAAGGGTGGACTGCGATAA+AGG | + | tig0024115:6590-6609 | Msa1414380:intron | 50.0% |
| TACAGATGGTGTAGGGTCCA+AGG | + | tig0024115:7030-7049 | Msa1414380:CDS | 50.0% | |
| ACAGGCTGTCCTTATACGGA+AGG | - | tig0024115:7175-7194 | Msa1414380:intergenic | 50.0% | |
| GGATGGTAATCGGGTATGTG+TGG | + | tig0024115:7256-7275 | Msa1414380:intron | 50.0% | |
| ATAGACCACCGGGTCATGAT+TGG | + | tig0024115:7867-7886 | Msa1414380:CDS | 50.0% | |
| TAGACCACCGGGTCATGATT+GGG | + | tig0024115:7868-7887 | Msa1414380:CDS | 50.0% | |
| TCAAGCTCCCAATCATGACC+CGG | - | tig0024115:7878-7897 | Msa1414380:intergenic | 50.0% | |
| CATGATTGGGAGCTTGAACC+AGG | + | tig0024115:7881-7900 | Msa1414380:CDS | 50.0% | |
| !! | GCGGTGGTTAGTTGGTAACT+TGG | + | tig0024115:8017-8036 | Msa1414380:intron | 50.0% |
| AAAGCTGACCTTGTTCCCTG+TGG | - | tig0024115:8074-8093 | Msa1414380:intergenic | 50.0% | |
| TTCTTGCACGGTGACTGTGA+TGG | - | tig0024115:8117-8136 | Msa1414380:intergenic | 50.0% | |
| GCACTGTATGAACGAGCAGT+TGG | + | tig0024115:8167-8186 | Msa1414380:CDS | 50.0% | |
| !! | TGTTGGTTTGCAAGCTTGCG+TGG | + | tig0024115:8330-8349 | Msa1414380:intron | 50.0% |
| GTGCTAAACGAGGCAAGGTA+TGG | + | tig0024115:8500-8519 | Msa1414380:intron | 50.0% | |
| ! | GTGTTTTCATTGGCGAGAGG+GGG | + | tig0024115:9124-9143 | Msa1414380:intron | 50.0% |
| AACTCGTTGTGACGCCATCT+AGG | - | tig0024115:9167-9186 | Msa1414380:intergenic | 50.0% | |
| CTCAACTATCAACGAGGGGT+AGG | - | tig0024115:9249-9268 | Msa1414380:intergenic | 50.0% | |
| GGCTCTCAACTATCAACGAG+GGG | - | tig0024115:9253-9272 | Msa1414380:intergenic | 50.0% | |
| CGGCTCTCAACTATCAACGA+GGG | - | tig0024115:9254-9273 | Msa1414380:intergenic | 50.0% | |
| GAATGCCAGTGTCTTTCGCA+AGG | + | tig0024115:9361-9380 | Msa1414380:intron | 50.0% | |
| TGGGGGCTTCAACCTTATCT+TGG | + | tig0024115:9453-9472 | Msa1414380:intron | 50.0% | |
| GGGGGCTTCAACCTTATCTT+GGG | + | tig0024115:9454-9473 | Msa1414380:intron | 50.0% | |
| TTACTCTCAAGGGGTCTGCA+TGG | + | tig0024115:9567-9586 | Msa1414380:intron | 50.0% | |
| TACTCTCAAGGGGTCTGCAT+GGG | + | tig0024115:9568-9587 | Msa1414380:intron | 50.0% | |
| CATCTCCCTCGTTACTTCCT+GGG | - | tig0024115:9774-9793 | Msa1414380:intergenic | 50.0% | |
| TCATCTCCCTCGTTACTTCC+TGG | - | tig0024115:9775-9794 | Msa1414380:intergenic | 50.0% | |
| TCCTTTCTGCCTTGAGGACA+AGG | + | tig0024115:9818-9837 | Msa1414380:intron | 50.0% | |
| CCTAAACTGCCTTGTCCTCA+AGG | - | tig0024115:9830-9849 | Msa1414380:intergenic | 50.0% | |
| CCTTGAGGACAAGGCAGTTT+AGG | + | tig0024115:9827-9846 | Msa1414380:intron | 50.0% | |
| !! | TTTTAGGTGGATGGTCCGGT+TGG | + | tig0024115:9855-9874 | Msa1414380:intron | 50.0% |
| CTAAAGCTCCTGCATACGCA+AGG | + | tig0024115:9951-9970 | Msa1414380:intron | 50.0% | |
| AATTTCGCGTGCGACTGAGC+GGG | - | tig0024115:1341-1360 | None:intergenic | 55.0% | |
| GAATTTCGCGTGCGACTGAG+CGG | - | tig0024115:1342-1361 | None:intergenic | 55.0% | |
| ACGCGAAATTCCGACCGGAA+CGG | + | tig0024115:1351-1370 | Msa1414380:CDS | 55.0% | |
| GTGGATCCTTCTCAAGACGG+TGG | - | tig0024115:1405-1424 | Msa1414380:intergenic | 55.0% | |
| AGGATCCACGTGCTCTATGG+CGG | + | tig0024115:1416-1435 | Msa1414380:CDS | 55.0% | |
| !! | GGACTGGCTATACCAGCACA+AGG | + | tig0024115:1447-1466 | Msa1414380:CDS | 55.0% |
| TATCTGGATGTGAGCCGGGT+CGG | + | tig0024115:1481-1500 | Msa1414380:CDS | 55.0% | |
| GGAAATGGAGCCGAGGTTTC+AGG | + | tig0024115:1525-1544 | Msa1414380:CDS | 55.0% | |
| AATGGAGCCGAGGTTTCAGG+CGG | + | tig0024115:1528-1547 | Msa1414380:CDS | 55.0% | |
| TTCAACGCCGCCTGAAACCT+CGG | - | tig0024115:1538-1557 | Msa1414380:intergenic | 55.0% | |
| CCAACCATACGCCCTTCATC+AGG | - | tig0024115:1598-1617 | Msa1414380:intergenic | 55.0% | |
| ! | CCTGATGAAGGGCGTATGGT+TGG | + | tig0024115:1595-1614 | Msa1414380:CDS | 55.0% |
| GGCGTATGGTTGGGCATTAC+TGG | + | tig0024115:1605-1624 | Msa1414380:CDS | 55.0% | |
| GTCCGCGTGAGCATAGTAGT+TGG | + | tig0024115:1874-1893 | Msa1414380:intron | 55.0% | |
| GCGTGAGCATAGTAGTTGGC+AGG | + | tig0024115:1878-1897 | Msa1414380:intron | 55.0% | |
| CCAACTGCTATGCATGTCCC+TGG | - | tig0024115:1921-1940 | Msa1414380:intergenic | 55.0% | |
| CCAGGGACATGCATAGCAGT+TGG | + | tig0024115:1918-1937 | Msa1414380:intron | 55.0% | |
| TAAGCCTCCTTCATCTCCCG+AGG | + | tig0024115:2833-2852 | Msa1414380:CDS | 55.0% | |
| AAGCCTCCTTCATCTCCCGA+GGG | + | tig0024115:2834-2853 | Msa1414380:CDS | 55.0% | |
| AACCTTCCCTCGGGAGATGA+AGG | - | tig0024115:2843-2862 | Msa1414380:intergenic | 55.0% | |
| GGGATTGGAGGTTCTGCACT+TGG | + | tig0024115:2882-2901 | Msa1414380:CDS | 55.0% | |
| TGGGTCCCACACAAAGAGGT+TGG | + | tig0024115:3762-3781 | Msa1414380:intron | 55.0% | |
| GTGGGTCCAACCTCTTTGTG+TGG | - | tig0024115:3771-3790 | Msa1414380:intergenic | 55.0% | |
| GGCACCCCTGAGACTAGAAA+TGG | + | tig0024115:4458-4477 | Msa1414380:CDS | 55.0% | |
| CCCATGTTTGACTGGGTAGG+AGG | + | tig0024115:4993-5012 | Msa1414380:CDS | 55.0% | |
| CTGGGTAGGAGGTAGAACGT+CGG | + | tig0024115:5004-5023 | Msa1414380:CDS | 55.0% | |
| ACGTCGGAGATGTCTGCAGT+CGG | + | tig0024115:5020-5039 | Msa1414380:CDS | 55.0% | |
| CCAATTACCTGCAGAGCTGC+TGG | - | tig0024115:5053-5072 | Msa1414380:intergenic | 55.0% | |
| CCAGCAGCTCTGCAGGTAAT+TGG | + | tig0024115:5050-5069 | Msa1414380:intron | 55.0% | |
| ! | GCTTCTTGGTGCATCGCTGA+TGG | + | tig0024115:5161-5180 | Msa1414380:CDS | 55.0% |
| ! | TGGTGCATCGCTGATGGATG+AGG | + | tig0024115:5167-5186 | Msa1414380:CDS | 55.0% |
| TGCAAGCAATGCAGGTGCTC+AGG | + | tig0024115:5671-5690 | Msa1414380:intron | 55.0% | |
| TCACACCTAGGCTATGGGCT+TGG | + | tig0024115:6343-6362 | Msa1414380:intron | 55.0% | |
| ATGCTCCAAGCCCATAGCCT+AGG | - | tig0024115:6351-6370 | Msa1414380:intergenic | 55.0% | |
| TAGGCTATGGGCTTGGAGCA+TGG | + | tig0024115:6350-6369 | Msa1414380:intron | 55.0% | |
| GCTTGGAGCATGGACAATGC+AGG | + | tig0024115:6360-6379 | Msa1414380:intron | 55.0% | |
| TGGAGCATGGACAATGCAGG+TGG | + | tig0024115:6363-6382 | Msa1414380:intron | 55.0% | |
| GGAGCATGGACAATGCAGGT+GGG | + | tig0024115:6364-6383 | Msa1414380:intron | 55.0% | |
| CAATGCAGGTGGGCCAACAA+TGG | + | tig0024115:6374-6393 | Msa1414380:intron | 55.0% | |
| ACTCCAAAGGTGGCTAAGGG+TGG | + | tig0024115:6577-6596 | Msa1414380:intron | 55.0% | |
| AGTCCACCCTTAGCCACCTT+TGG | - | tig0024115:6583-6602 | Msa1414380:intergenic | 55.0% | |
| ! | GGTGCTACGTGATAGACCAC+CGG | + | tig0024115:7856-7875 | Msa1414380:CDS | 55.0% |
| GTGCTACGTGATAGACCACC+GGG | + | tig0024115:7857-7876 | Msa1414380:CDS | 55.0% | |
| ACAAGGGCTCCAACTGATCG+AGG | - | tig0024115:8146-8165 | Msa1414380:intergenic | 55.0% | |
| GAAGCTGGTAAGAAAGCGGC+AGG | + | tig0024115:8443-8462 | Msa1414380:CDS | 55.0% | |
| AGCACTTCAAAAGCGGGTGC+TGG | + | tig0024115:8475-8494 | Msa1414380:CDS | 55.0% | |
| TGGCAGTGCTAAACGAGGCA+AGG | + | tig0024115:8495-8514 | Msa1414380:CDS | 55.0% | |
| GCGGCTCTCAACTATCAACG+AGG | - | tig0024115:9255-9274 | Msa1414380:intergenic | 55.0% | |
| ! | ACAGATTTGTTCGGCCCGCT+TGG | - | tig0024115:9408-9427 | Msa1414380:intergenic | 55.0% |
| CTGACTGGGCCATCATTTGG+AGG | + | tig0024115:9738-9757 | Msa1414380:intron | 55.0% | |
| GCCTTGTCCTCAAGGCAGAA+AGG | - | tig0024115:9822-9841 | Msa1414380:intergenic | 55.0% | |
| AGAAGGGGACAGATCAGTGG+AGG | + | tig0024115:9883-9902 | Msa1414380:intron | 55.0% | |
| GCTCCTGCATACGCAAGGTT+CGG | + | tig0024115:9956-9975 | Msa1414380:intron | 55.0% | |
| CTCCTGCATACGCAAGGTTC+GGG | + | tig0024115:9957-9976 | Msa1414380:intron | 55.0% | |
| TTCCCGAACCTTGCGTATGC+AGG | - | tig0024115:9962-9981 | Msa1414380:intergenic | 55.0% | |
| TGCATACGCAAGGTTCGGGA+AGG | + | tig0024115:9961-9980 | Msa1414380:intron | 55.0% | |
| GCATACGCAAGGTTCGGGAA+GGG | + | tig0024115:9962-9981 | Msa1414380:intron | 55.0% | |
| CATACGCAAGGTTCGGGAAG+GGG | + | tig0024115:9963-9982 | Msa1414380:intron | 55.0% | |
| GAGGGAGTTTGGGTCGGGTT+TGG | - | tig0024115:1315-1334 | None:intergenic | 60.0% | |
| GGTTGGAGGGAGTTTGGGTC+GGG | - | tig0024115:1320-1339 | None:intergenic | 60.0% | |
| GGGTTGGAGGGAGTTTGGGT+CGG | - | tig0024115:1321-1340 | None:intergenic | 60.0% | |
| !! | GAGCGGGTTGGAGGGAGTTT+GGG | - | tig0024115:1325-1344 | None:intergenic | 60.0% |
| !! | TGAGCGGGTTGGAGGGAGTT+TGG | - | tig0024115:1326-1345 | None:intergenic | 60.0% |
| GTCGCACGCGAAATTCCGAC+CGG | + | tig0024115:1346-1365 | Msa1414380:CDS | 60.0% | |
| TAACGCCGCCATAGAGCACG+TGG | - | tig0024115:1424-1443 | Msa1414380:intergenic | 60.0% | |
| TGCTCTATGGCGGCGTTACG+TGG | + | tig0024115:1426-1445 | Msa1414380:CDS | 60.0% | |
| TATGGCGGCGTTACGTGGAC+TGG | + | tig0024115:1431-1450 | Msa1414380:CDS | 60.0% | |
| ATCTGGATGTGAGCCGGGTC+GGG | + | tig0024115:1482-1501 | Msa1414380:CDS | 60.0% | |
| ! | GAGGTTTCAGGCGGCGTTGA+AGG | + | tig0024115:1537-1556 | Msa1414380:CDS | 60.0% |
| ! | TCAGGCGGCGTTGAAGGCTA+TGG | + | tig0024115:1543-1562 | Msa1414380:CDS | 60.0% |
| CTTCCCTCGGGAGATGAAGG+AGG | - | tig0024115:2840-2859 | Msa1414380:intergenic | 60.0% | |
| CTCCTTCATCTCCCGAGGGA+AGG | + | tig0024115:2838-2857 | Msa1414380:CDS | 60.0% | |
| AGCTCCCAATCATGACCCGG+TGG | - | tig0024115:7875-7894 | Msa1414380:intergenic | 60.0% | |
| !! | CGGTGACTGTGATGGACTCC+CGG | - | tig0024115:8109-8128 | Msa1414380:intergenic | 60.0% |
| !! | GGTGCTGGCAGTGCTAAACG+AGG | + | tig0024115:8490-8509 | Msa1414380:CDS | 60.0% |
| !! | GTGCGACTGAGCGGGTTGGA+GGG | - | tig0024115:1333-1352 | None:intergenic | 65.0% |
| GCGGAGAGATCCGTTCCGGT+CGG | - | tig0024115:1364-1383 | Msa1414380:intergenic | 65.0% | |
| CACGGCGGAGAGATCCGTTC+CGG | - | tig0024115:1368-1387 | Msa1414380:intergenic | 65.0% | |
| ! | GGCGGCGTTGAAGGCTATGG+AGG | + | tig0024115:1546-1565 | Msa1414380:CDS | 65.0% |
| CCTGCAGAGCTGCTGGAAGC+AGG | - | tig0024115:5046-5065 | Msa1414380:intergenic | 65.0% | |
| CCTGCTTCCAGCAGCTCTGC+AGG | + | tig0024115:5043-5062 | Msa1414380:CDS | 65.0% | |
| !! | CGTGCGACTGAGCGGGTTGG+AGG | - | tig0024115:1334-1353 | None:intergenic | 70.0% |
| TCGCGTGCGACTGAGCGGGT+TGG | - | tig0024115:1337-1356 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024115 | gene | 1202 | 11039 | 1202 | ID=Msa1414380;Name=Msa1414380 |
| tig0024115 | mRNA | 1202 | 11039 | 1202 | ID=Msa1414380-mRNA-1;Parent=Msa1414380;Name=Msa1414380-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.92|0.92|1|1|1|14|391|612 |
| tig0024115 | exon | 1202 | 1717 | 1202 | ID=Msa1414380-mRNA-1:exon:21758;Parent=Msa1414380-mRNA-1 |
| tig0024115 | exon | 2831 | 2953 | 2831 | ID=Msa1414380-mRNA-1:exon:21759;Parent=Msa1414380-mRNA-1 |
| tig0024115 | exon | 3993 | 4091 | 3993 | ID=Msa1414380-mRNA-1:exon:21760;Parent=Msa1414380-mRNA-1 |
| tig0024115 | exon | 4452 | 4535 | 4452 | ID=Msa1414380-mRNA-1:exon:21761;Parent=Msa1414380-mRNA-1 |
| tig0024115 | exon | 4921 | 5064 | 4921 | ID=Msa1414380-mRNA-1:exon:21762;Parent=Msa1414380-mRNA-1 |
| tig0024115 | exon | 5141 | 5206 | 5141 | ID=Msa1414380-mRNA-1:exon:21763;Parent=Msa1414380-mRNA-1 |
| tig0024115 | exon | 6983 | 7051 | 6983 | ID=Msa1414380-mRNA-1:exon:21764;Parent=Msa1414380-mRNA-1 |
| tig0024115 | exon | 7161 | 7268 | 7161 | ID=Msa1414380-mRNA-1:exon:21765;Parent=Msa1414380-mRNA-1 |
| tig0024115 | exon | 7661 | 7713 | 7661 | ID=Msa1414380-mRNA-1:exon:21766;Parent=Msa1414380-mRNA-1 |
| tig0024115 | exon | 7802 | 7940 | 7802 | ID=Msa1414380-mRNA-1:exon:21767;Parent=Msa1414380-mRNA-1 |
| tig0024115 | exon | 8077 | 8233 | 8077 | ID=Msa1414380-mRNA-1:exon:21768;Parent=Msa1414380-mRNA-1 |
| tig0024115 | exon | 8438 | 8516 | 8438 | ID=Msa1414380-mRNA-1:exon:21769;Parent=Msa1414380-mRNA-1 |
| tig0024115 | exon | 10298 | 10364 | 10298 | ID=Msa1414380-mRNA-1:exon:21770;Parent=Msa1414380-mRNA-1 |
| tig0024115 | exon | 10514 | 11039 | 10514 | ID=Msa1414380-mRNA-1:exon:21771;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 1202 | 1717 | 1202 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 2831 | 2953 | 2831 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 3993 | 4091 | 3993 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 4452 | 4535 | 4452 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 4921 | 5064 | 4921 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 5141 | 5206 | 5141 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 6983 | 7051 | 6983 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 7161 | 7268 | 7161 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 7661 | 7713 | 7661 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 7802 | 7940 | 7802 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 8077 | 8233 | 8077 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 8438 | 8516 | 8438 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 10298 | 10364 | 10298 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | CDS | 10514 | 10648 | 10514 | ID=Msa1414380-mRNA-1:cds;Parent=Msa1414380-mRNA-1 |
| tig0024115 | three_prime_UTR | 10649 | 11039 | 10649 | ID=Msa1414380-mRNA-1:three_prime_utr;Parent=Msa1414380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
