AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1406060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406060 MtrunA17_Chr4g0031961 82.484 314 15 3 1 292 1 296 2.81e-151 426
Msa1406060 MtrunA17_Chr7g0255711 43.318 217 76 6 8 201 5 197 7.60e-38 136
Msa1406060 MtrunA17_Chr2g0294911 43.396 106 47 2 110 202 206 311 2.27e-18 85.5
Msa1406060 MtrunA17_Chr4g0067981 55.882 68 24 1 110 171 210 277 3.73e-18 84.7
Msa1406060 MtrunA17_Chr3g0137101 43.299 97 46 2 114 204 197 290 2.99e-17 82.0
Msa1406060 MtrunA17_Chr2g0304841 59.322 59 18 1 114 166 212 270 1.01e-16 80.5
Msa1406060 MtrunA17_Chr1g0161431 38.655 119 50 4 55 167 157 258 7.15e-16 78.2
Msa1406060 MtrunA17_Chr4g0074401 59.016 61 19 1 112 166 200 260 1.03e-15 77.4
Msa1406060 MtrunA17_Chr1g0149841 39.450 109 45 3 114 205 190 294 5.96e-15 75.1
Msa1406060 MtrunA17_Chr4g0074411 59.016 61 19 1 112 166 198 258 1.13e-14 74.3
Msa1406060 MtrunA17_Chr8g0376881 44.944 89 41 3 97 178 190 277 1.07e-13 71.2
Msa1406060 MtrunA17_Chr7g0275891 36.296 135 65 4 114 228 190 323 2.70e-13 69.7
Msa1406060 MtrunA17_Chr1g0149831 38.261 115 52 4 73 181 92 193 2.94e-13 68.2
Msa1406060 MtrunA17_Chr6g0473731 46.032 63 28 1 112 168 92 154 7.36e-13 68.6
Msa1406060 MtrunA17_Chr4g0074421 61.702 47 18 0 112 158 130 176 1.25e-12 65.5
Msa1406060 MtrunA17_Chr3g0123131 32.000 150 85 5 86 225 176 318 1.50e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406060 AT3G46640.2 55.022 229 67 6 1 193 1 229 6.04e-69 218
Msa1406060 AT3G46640.1 55.022 229 67 6 1 193 1 229 6.04e-69 218
Msa1406060 AT3G46640.3 55.022 229 67 6 1 193 1 229 2.70e-68 216
Msa1406060 AT5G59570.2 52.049 244 92 9 11 230 25 267 2.50e-66 210
Msa1406060 AT5G59570.1 52.049 244 92 9 11 230 25 267 2.50e-66 210
Msa1406060 AT3G10760.1 46.354 192 84 5 8 188 5 188 4.08e-33 124
Msa1406060 AT5G05090.1 47.692 195 61 7 1 188 1 161 8.41e-32 119
Msa1406060 AT2G40970.1 65.957 94 17 2 110 188 100 193 2.10e-31 118
Msa1406060 AT3G16857.3 44.118 102 46 2 76 171 133 229 1.12e-19 89.7
Msa1406060 AT3G16857.2 44.118 102 46 2 76 171 203 299 1.47e-19 89.4
Msa1406060 AT3G16857.1 44.118 102 46 2 76 171 203 299 1.65e-19 89.4
Msa1406060 AT2G25180.1 39.850 133 65 4 48 172 133 258 3.32e-16 79.3
Msa1406060 AT5G58080.1 48.101 79 30 2 112 179 191 269 8.57e-16 78.2
Msa1406060 AT2G01760.3 50.000 76 29 2 114 180 134 209 1.20e-15 76.6
Msa1406060 AT2G01760.1 50.000 76 29 2 114 180 199 274 2.56e-15 76.3
Msa1406060 AT2G01760.2 50.000 76 29 2 114 180 227 302 3.77e-15 75.9
Msa1406060 AT4G31920.1 34.677 124 65 3 114 231 182 295 8.62e-13 68.9

Find 148 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGACCATTCATTATTCT+AGG 0.208986 tig0023178:-64627 Msa1406060:three_prime_UTR
AGAAGAAGGTTAACACTTTC+AGG 0.212736 tig0023178:+64934 None:intergenic
CTATGATGCATCATATTAAA+TGG 0.267208 tig0023178:+66734 None:intergenic
TCACAGATTTACAAACTTCT+TGG 0.277317 tig0023178:-65123 Msa1406060:three_prime_UTR
GGAGTGAGATCGTGGAGGTT+AGG 0.288087 tig0023178:+67580 None:intergenic
ACACACCCAATATAAGAAAA+TGG 0.290247 tig0023178:+64771 None:intergenic
CATTTAATATGATGCATCAT+AGG 0.291545 tig0023178:-66733 Msa1406060:CDS
GCTTGAACAAGATCTATAAA+AGG 0.294175 tig0023178:-64576 Msa1406060:three_prime_UTR
TTAGAATCAGCTATCTGTTT+AGG 0.301320 tig0023178:+65029 None:intergenic
GATGAGTTTGCCTCCTCCTT+CGG 0.309025 tig0023178:-66783 Msa1406060:CDS
GAGTGAGATCGTGGAGGTTA+GGG 0.316953 tig0023178:+67581 None:intergenic
TGAAGCCTTTCTTGTGGATA+AGG 0.335131 tig0023178:-64267 Msa1406060:three_prime_UTR
ACATCATCCACATGGGCATA+TGG 0.344716 tig0023178:-66807 Msa1406060:CDS
GTGGATGTTGTTGCTCATCT+TGG 0.347586 tig0023178:-67205 Msa1406060:CDS
ATGAGTTTGCCTCCTCCTTC+GGG 0.352579 tig0023178:-66782 Msa1406060:CDS
AAACAAGAATTCTCAAGGTT+GGG 0.364633 tig0023178:+64653 None:intergenic
CAAATGGTGGGACCCCTTCC+CGG 0.367038 tig0023178:+64516 None:intergenic
AGGGGTAACCTTGGCGCAAC+TGG 0.377114 tig0023178:+64401 None:intergenic
TTACACAAGAGGCTGTTTCC+AGG 0.378319 tig0023178:-64465 Msa1406060:three_prime_UTR
CGGGAAGGGGTCCCACCATT+TGG 0.381455 tig0023178:-64515 Msa1406060:three_prime_UTR
CTCGAAGGTGGTGGTGGATA+AGG 0.394424 tig0023178:+66863 None:intergenic
GCTCCTGCATACGCAGGGTC+CGG 0.400711 tig0023178:-64535 Msa1406060:three_prime_UTR
GAACAACGGAGACGATAAAA+AGG 0.405625 tig0023178:-67267 Msa1406060:CDS
TATATTGGGTGTGTAGGACT+AGG 0.412630 tig0023178:-64762 Msa1406060:three_prime_UTR
CATCATCCACATGGGCATAT+GGG 0.413116 tig0023178:-66806 Msa1406060:CDS
TCAAATGGAGGGCATGGAAA+TGG 0.414953 tig0023178:-66947 Msa1406060:CDS
AAGAGAGTACGGAGAGGCTC+CGG 0.421773 tig0023178:+67505 None:intergenic
CAAATAAAATAATACTAATC+AGG 0.422932 tig0023178:+64805 None:intergenic
GCATACGCAGGGTCCGGGAA+GGG 0.423667 tig0023178:-64529 Msa1406060:three_prime_UTR
CATACGCAGGGTCCGGGAAG+GGG 0.429334 tig0023178:-64528 Msa1406060:three_prime_UTR
TCAAATGCTAATCATTCAAA+TGG 0.429533 tig0023178:-66962 Msa1406060:CDS
TGATTGTTCCGGAGTTGCTT+CGG 0.434817 tig0023178:+67443 None:intergenic
TGAGGATGAGAATGTGGATT+CGG 0.435504 tig0023178:+66701 None:intergenic
TTCCCGGACCCTGCGTATGC+AGG 0.435681 tig0023178:+64532 None:intergenic
TGGATGTTGTTGCTCATCTT+GGG 0.442275 tig0023178:-67204 Msa1406060:CDS
CCGCAGAGTTTGCATGAAAC+CGG 0.443486 tig0023178:-67010 Msa1406060:CDS
AACATTAAGATATACTAATC+AGG 0.443774 tig0023178:+64828 None:intergenic
TTCCATGGCTTTGATCCCAC+CGG 0.445349 tig0023178:-67554 Msa1406060:CDS
AGTGGAAGCTGAAGCAGATT+CGG 0.449529 tig0023178:-67296 Msa1406060:CDS
ACGTGTAACGGAGTGGGAAA+AGG 0.453107 tig0023178:-67608 Msa1406060:CDS
AGAGAGTACGGAGAGGCTCC+GGG 0.454039 tig0023178:+67506 None:intergenic
CTGAAAGCGGAAGCGAGCTC+CGG 0.460721 tig0023178:+67535 None:intergenic
TGATGTCCCATACCAATCAT+AGG 0.460751 tig0023178:+66824 None:intergenic
AAGGTCACGGGTTCAAGTCC+TGG 0.462983 tig0023178:+64447 None:intergenic
AAAACAAGAATTCTCAAGGT+TGG 0.463126 tig0023178:+64652 None:intergenic
TCATGCAAACTCTGCGGCAC+AGG 0.465750 tig0023178:+67016 None:intergenic
GATTTGATGAGTGATTGTTC+CGG 0.471479 tig0023178:+67432 None:intergenic
ACAGCTACATAAAAGATTTG+TGG 0.472539 tig0023178:-67224 Msa1406060:CDS
ACAAGCCTTATCCACAAGAA+AGG 0.474142 tig0023178:+64262 None:intergenic
TGTTACAATGAGAGTGGAAA+GGG 0.475079 tig0023178:-64724 Msa1406060:three_prime_UTR
CTCCTGCATACGCAGGGTCC+GGG 0.482619 tig0023178:-64534 Msa1406060:three_prime_UTR
CGATCTCACTCCTCTTTCCA+TGG 0.482732 tig0023178:-67569 Msa1406060:CDS
ATATGATGCATCATAGGGAT+TGG 0.484646 tig0023178:-66727 Msa1406060:CDS
ATGAGAATGATTAGCAGAAC+CGG 0.486272 tig0023178:+66991 None:intergenic
AGATTCAAATGTTTGATTGT+TGG 0.488040 tig0023178:-65252 Msa1406060:exon
ATTTAATATGATGCATCATA+GGG 0.488329 tig0023178:-66732 Msa1406060:CDS
ATGCAGTTGATGAATGTTGA+AGG 0.492393 tig0023178:-67154 Msa1406060:CDS
TTCCGCTTTCAGCATCTCCC+CGG 0.493661 tig0023178:-67524 Msa1406060:CDS
TAGAAATGTTACAATGAGAG+TGG 0.495630 tig0023178:-64730 Msa1406060:three_prime_UTR
ACCACAGAGCAGGTTACAAA+TGG 0.503255 tig0023178:+64860 None:intergenic
ATCCCTTGATCAAAAGAACT+AGG 0.505539 tig0023178:-64600 Msa1406060:three_prime_UTR
ATCATACTCGAAGGTGGTGG+TGG 0.507063 tig0023178:+66857 None:intergenic
TGCATACGCAGGGTCCGGGA+AGG 0.509378 tig0023178:-64530 Msa1406060:three_prime_UTR
CTTGAACAAGATCTATAAAA+GGG 0.510111 tig0023178:-64575 Msa1406060:three_prime_UTR
CGTGTAACGGAGTGGGAAAA+GGG 0.517852 tig0023178:-67607 Msa1406060:CDS
TCTCTTCTCCGAAGCAACTC+CGG 0.518098 tig0023178:-67451 Msa1406060:CDS
TAGGCGGTGATTGTGAGTTA+AGG 0.520176 tig0023178:-65070 Msa1406060:three_prime_UTR
AAAGCGGAAGCGAGCTCCGG+TGG 0.521066 tig0023178:+67538 None:intergenic
GCTGCGTACAATACACCAAA+TGG 0.522967 tig0023178:+64500 None:intergenic
ACCGCCTACATTTACGTGAC+AGG 0.525269 tig0023178:+65085 None:intergenic
AATCATTCAAATGGAGGGCA+TGG 0.528339 tig0023178:-66953 Msa1406060:CDS
AGATTCTGTTACAGAAGAAG+TGG 0.528651 tig0023178:-67314 Msa1406060:CDS
TGCAGGAGCTTCAGTGCACC+AGG 0.530180 tig0023178:+64549 None:intergenic
GTTGTTGTCATGTGACTGTA+AGG 0.540289 tig0023178:+64428 None:intergenic
AAAAGATGATCAGAAGAAGA+AGG 0.541009 tig0023178:+67049 None:intergenic
ATGTCAATGCCGCCTATGAT+TGG 0.542928 tig0023178:-66836 Msa1406060:CDS
GACATATGAGGATGAGAATG+TGG 0.546426 tig0023178:+66695 None:intergenic
AACAAGAATTCTCAAGGTTG+GGG 0.547453 tig0023178:+64654 None:intergenic
ACTTTATGAAGCCTTTCTTG+TGG 0.547792 tig0023178:-64273 Msa1406060:three_prime_UTR
ACGAAGAACGTGTAACGGAG+TGG 0.550873 tig0023178:-67615 Msa1406060:CDS
AATGCTAATCATTCAAATGG+AGG 0.554348 tig0023178:-66959 Msa1406060:CDS
TGCATAGATCTTGTTCAAGA+GGG 0.554891 tig0023178:+64382 None:intergenic
ATCATCCACATGGGCATATG+GGG 0.557841 tig0023178:-66805 Msa1406060:CDS
CTAGAACCACCCGAAGGAGG+AGG 0.558990 tig0023178:+66773 None:intergenic
CTATCATTGGAAGACATATG+AGG 0.559295 tig0023178:+66683 None:intergenic
GGGATCAAAGCCATGGAAAG+AGG 0.559832 tig0023178:+67559 None:intergenic
ATGCCGCCTATGATTGGTAT+GGG 0.560585 tig0023178:-66830 Msa1406060:CDS
AATTCCTGTCACGTAAATGT+AGG 0.561916 tig0023178:-65089 Msa1406060:three_prime_UTR
ATAAAACCTAGAATAATGAA+TGG 0.566088 tig0023178:+64621 None:intergenic
CTGCATAGATCTTGTTCAAG+AGG 0.566537 tig0023178:+64381 None:intergenic
GTCATGTGACTGTAAGGTCA+CGG 0.567657 tig0023178:+64434 None:intergenic
GGTTGACGTCGAAGAGAGTA+CGG 0.568518 tig0023178:+67494 None:intergenic
AATTTGTTTGTGCAATGTAG+AGG 0.569279 tig0023178:+65211 None:intergenic
CTCCGGTGGGATCAAAGCCA+TGG 0.569390 tig0023178:+67552 None:intergenic
GTTCGGATTCAAGAAAACAT+AGG 0.571081 tig0023178:-67342 Msa1406060:CDS
AGATCTATAAAAGGGCAACC+TGG 0.574490 tig0023178:-64567 Msa1406060:three_prime_UTR
AATGCCGCCTATGATTGGTA+TGG 0.579585 tig0023178:-66831 Msa1406060:CDS
CTAGAATAATGAATGGTCAC+AGG 0.580291 tig0023178:+64628 None:intergenic
ATGCTAATCATTCAAATGGA+GGG 0.580774 tig0023178:-66958 Msa1406060:CDS
CTTTATTTGAAGAGAATGCA+AGG 0.583827 tig0023178:-67088 Msa1406060:CDS
CAACTTTACCAGTTGCGCCA+AGG 0.585916 tig0023178:-64409 Msa1406060:three_prime_UTR
TCATGTGACTGTAAGGTCAC+GGG 0.586314 tig0023178:+64435 None:intergenic
ACTGAAGCTCCTGCATACGC+AGG 0.586588 tig0023178:-64541 Msa1406060:three_prime_UTR
CAAATTGTAATTTAGCTCCG+TGG 0.586773 tig0023178:+65166 None:intergenic
AACAAACTGAATGGGTGAAG+AGG 0.590082 tig0023178:-67647 None:intergenic
GGTGGTGGTGGATAAGGCAT+AGG 0.595338 tig0023178:+66869 None:intergenic
CTCCGGGGAGATGCTGAAAG+CGG 0.595726 tig0023178:+67522 None:intergenic
GAACATTGATACCACAGAGC+AGG 0.597922 tig0023178:+64850 None:intergenic
TGGAAAGAGGAGTGAGATCG+TGG 0.601806 tig0023178:+67572 None:intergenic
GCGTACAATACACCAAATGG+TGG 0.601920 tig0023178:+64503 None:intergenic
AGGTAAAACAAGAATTCTCA+AGG 0.603233 tig0023178:+64648 None:intergenic
CTGAAGCTCCTGCATACGCA+GGG 0.605623 tig0023178:-64540 Msa1406060:three_prime_UTR
ATTGCACAAACAAATTCTTG+AGG 0.608904 tig0023178:-65204 Msa1406060:three_prime_UTR
ATGTTACAATGAGAGTGGAA+AGG 0.612203 tig0023178:-64725 Msa1406060:three_prime_UTR
AAGAGAGAGTGTGTTGCGAG+AGG 0.612371 tig0023178:+67468 None:intergenic
TTTATTTGAAGAGAATGCAA+GGG 0.613259 tig0023178:-67087 Msa1406060:CDS
GACATCATACTCGAAGGTGG+TGG 0.615415 tig0023178:+66854 None:intergenic
AGCAATGGTTCTGAAGAAGA+AGG 0.615488 tig0023178:+64920 None:intergenic
GAGCTAGAACCACCCGAAGG+AGG 0.617421 tig0023178:+66770 None:intergenic
GGAGGGCATGGAAATGGACA+TGG 0.620162 tig0023178:-66941 Msa1406060:CDS
GGCATTGACATCATACTCGA+AGG 0.620560 tig0023178:+66848 None:intergenic
CTCATCCCCATATGCCCATG+TGG 0.624417 tig0023178:+66800 None:intergenic
GAGAGTACGGAGAGGCTCCG+GGG 0.626074 tig0023178:+67507 None:intergenic
AGTTTGCCTCCTCCTTCGGG+TGG 0.628086 tig0023178:-66779 Msa1406060:CDS
CGAAGAACGTGTAACGGAGT+GGG 0.629837 tig0023178:-67614 Msa1406060:CDS
TTGTTCAAGAGGGGTAACCT+TGG 0.631918 tig0023178:+64392 None:intergenic
GTTACAATGAGAGTGGAAAG+GGG 0.635051 tig0023178:-64723 Msa1406060:three_prime_UTR
TGTGGGGTCCACACCAACCT+CGG 0.635154 tig0023178:+67244 None:intergenic
AAGCGGAAGCGAGCTCCGGT+GGG 0.636737 tig0023178:+67539 None:intergenic
AACAGACGAAGAACGTGTAA+CGG 0.639303 tig0023178:-67620 Msa1406060:CDS
GGATGAGAATGTGGATTCGG+AGG 0.643753 tig0023178:+66704 None:intergenic
GGTATGGGACATCATCCACA+TGG 0.649470 tig0023178:-66815 Msa1406060:CDS
GGAAGTATATGAAGATTCCA+CGG 0.650423 tig0023178:-65183 Msa1406060:three_prime_UTR
TCCTGTCACGTAAATGTAGG+CGG 0.654015 tig0023178:-65086 Msa1406060:three_prime_UTR
TCAGGAGTACACGCACTACA+CGG 0.666051 tig0023178:+64952 None:intergenic
GCATAGATCTTGTTCAAGAG+GGG 0.667682 tig0023178:+64383 None:intergenic
CGTACAATACACCAAATGGT+GGG 0.668975 tig0023178:+64504 None:intergenic
AAAGAGGAGTGAGATCGTGG+AGG 0.675435 tig0023178:+67575 None:intergenic
ATTGACATCATACTCGAAGG+TGG 0.684359 tig0023178:+66851 None:intergenic
GCCATTTGTAACCTGCTCTG+TGG 0.690054 tig0023178:-64861 Msa1406060:three_prime_UTR
AGAGTGTGTTGCGAGAGGCG+CGG 0.693296 tig0023178:+67473 None:intergenic
TAAGAGCTAGAACCACCCGA+AGG 0.715458 tig0023178:+66767 None:intergenic
AGATTCGGCTGTTAGAACAA+CGG 0.719098 tig0023178:-67281 Msa1406060:CDS
TCATCTTGGGATAAAGAACG+CGG 0.719383 tig0023178:-67191 Msa1406060:CDS
GTATGGGACATCATCCACAT+GGG 0.727717 tig0023178:-66814 Msa1406060:CDS
CCGGTTTCATGCAAACTCTG+CGG 0.740073 tig0023178:+67010 None:intergenic
TGTCCCATACCAATCATAGG+CGG 0.741457 tig0023178:+66827 None:intergenic
ACGTCGAAGAGAGTACGGAG+AGG 0.748301 tig0023178:+67499 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGATAGTAATAAATAAAA+GGG - tig0023178:65186-65205 Msa1406060:three_prime_UTR 10.0%
!!! ATTTGTACTTTTTTTTTTTA+AGG - tig0023178:67543-67562 Msa1406060:CDS 10.0%
!!! CTTTTATTTATTACTATCAT+TGG + tig0023178:65187-65206 None:intergenic 15.0%
!! CAATGATAGTAATAAATAAA+AGG - tig0023178:65185-65204 Msa1406060:three_prime_UTR 15.0%
!! ATGATAGTAATAAATAAAAG+GGG - tig0023178:65187-65206 Msa1406060:three_prime_UTR 15.0%
!!! TTTACTTAAGATTGAATTTT+TGG - tig0023178:65567-65586 Msa1406060:intron 15.0%
!!! TTACTTAAGATTGAATTTTT+GGG - tig0023178:65568-65587 Msa1406060:intron 15.0%
!!! TTTGTTATAGAAATAACTTA+CGG + tig0023178:65820-65839 None:intergenic 15.0%
!!! AAGTTAAATTATTTTCATGT+AGG - tig0023178:65850-65869 Msa1406060:intron 15.0%
!! AAGTTTATTAAATTACTATG+TGG - tig0023178:66118-66137 Msa1406060:intron 15.0%
!! AGTTTATTAAATTACTATGT+GGG - tig0023178:66119-66138 Msa1406060:intron 15.0%
!! CAAAATTTAATGTAAATGAT+TGG - tig0023178:66224-66243 Msa1406060:intron 15.0%
!!! TTTGTTTATAGTGATTTTTT+AGG - tig0023178:66344-66363 Msa1406060:intron 15.0%
!!! TATTGATTGTATATTTAATG+AGG - tig0023178:66537-66556 Msa1406060:intron 15.0%
!! CAAATAAAATAATACTAATC+AGG + tig0023178:67052-67071 None:intergenic 15.0%
!! ATTTAATATGATGCATCATA+GGG - tig0023178:65122-65141 Msa1406060:three_prime_UTR 20.0%
!!! CTTATTCTTTTGAACATAAT+TGG - tig0023178:65287-65306 Msa1406060:intron 20.0%
!!! TTATTTTCTTAAGCTCTTAT+AGG - tig0023178:65415-65434 Msa1406060:intron 20.0%
!!! TTTGACTTTATTTTATCTGT+TGG - tig0023178:65453-65472 Msa1406060:intron 20.0%
!! ATAACCAGAAATTAAGTAAT+AGG + tig0023178:65644-65663 None:intergenic 20.0%
!!! TTTTTTAGTACATAACATTG+AGG - tig0023178:65746-65765 Msa1406060:intron 20.0%
!! TTGTTATAGAAATAACTTAC+GGG + tig0023178:65819-65838 None:intergenic 20.0%
!! AATTTAATGTAAATGATTGG+TGG - tig0023178:66227-66246 Msa1406060:intron 20.0%
!! ATTTAATGTAAATGATTGGT+GGG - tig0023178:66228-66247 Msa1406060:intron 20.0%
!!! TTTATAGTGATTTTTTAGGA+TGG - tig0023178:66348-66367 Msa1406060:intron 20.0%
!! TTGGAAAATACATATTTCAT+TGG - tig0023178:66386-66405 Msa1406060:intron 20.0%
!! AAACATTTGAATCTACAAAA+AGG + tig0023178:66596-66615 None:intergenic 20.0%
!! AACATTAAGATATACTAATC+AGG + tig0023178:67029-67048 None:intergenic 20.0%
!!! TAAGTTCCATTTTCTTATAT+TGG - tig0023178:67077-67096 Msa1406060:CDS 20.0%
!!! AAGTTCCATTTTCTTATATT+GGG - tig0023178:67078-67097 Msa1406060:CDS 20.0%
!!! GATTTATATTTTGTAAGTAG+AGG - tig0023178:67153-67172 Msa1406060:CDS 20.0%
!! ATAAAACCTAGAATAATGAA+TGG + tig0023178:67236-67255 None:intergenic 20.0%
!!! TTGCTAATTTGTTTTTTTCT+TGG - tig0023178:67506-67525 Msa1406060:CDS 20.0%
!!! TAATTTGTTTTTTTCTTGGT+GGG - tig0023178:67510-67529 Msa1406060:CDS 20.0%
!!! TTTTATACTGATTTGCTAAT+TGG - tig0023178:67630-67649 Msa1406060:CDS 20.0%
! TTTATTTGAAGAGAATGCAA+GGG - tig0023178:64767-64786 Msa1406060:three_prime_UTR 25.0%
! TCAAATGCTAATCATTCAAA+TGG - tig0023178:64892-64911 Msa1406060:three_prime_UTR 25.0%
! CTATGATGCATCATATTAAA+TGG + tig0023178:65123-65142 None:intergenic 25.0%
! CATTTAATATGATGCATCAT+AGG - tig0023178:65121-65140 Msa1406060:three_prime_UTR 25.0%
! CATACCTATTACTTAATTTC+TGG - tig0023178:65637-65656 Msa1406060:intron 25.0%
! AAAAACAGAACAAAGAAACA+AGG + tig0023178:65731-65750 None:intergenic 25.0%
! ATAGGTCATAAATAATCATC+GGG + tig0023178:65774-65793 None:intergenic 25.0%
! CATAGGTCATAAATAATCAT+CGG + tig0023178:65775-65794 None:intergenic 25.0%
! TGTTATAGAAATAACTTACG+GGG + tig0023178:65818-65837 None:intergenic 25.0%
!!! AGCTATTTTGTATAGTTTGT+AGG - tig0023178:65891-65910 Msa1406060:intron 25.0%
!! TACAAACTGAAAACATCTTT+TGG - tig0023178:65914-65933 Msa1406060:intron 25.0%
!! ACAAACTGAAAACATCTTTT+GGG - tig0023178:65915-65934 Msa1406060:intron 25.0%
!!! TTTTTTAGTGCATTACATTG+AGG - tig0023178:66178-66197 Msa1406060:intron 25.0%
! AAATACAACTTTACCATATG+CGG + tig0023178:66295-66314 None:intergenic 25.0%
! ATGTGATACAATATCAGATT+TGG - tig0023178:66319-66338 Msa1406060:intron 25.0%
!!! GATACTTTTGTTTTGTTTGT+TGG - tig0023178:66426-66445 Msa1406060:intron 25.0%
! TAAGAATGCATTTCTTCATT+TGG - tig0023178:66459-66478 Msa1406060:intron 25.0%
! TATATTATATTACCATTGCC+CGG - tig0023178:66485-66504 Msa1406060:intron 25.0%
! AGATTCAAATGTTTGATTGT+TGG - tig0023178:66602-66621 Msa1406060:intron 25.0%
!! TCTTTTATTCAATGTAGCAA+TGG + tig0023178:66952-66971 None:intergenic 25.0%
! CTTGAACAAGATCTATAAAA+GGG - tig0023178:67279-67298 Msa1406060:CDS 25.0%
!!! CTAATTTGTTTTTTTCTTGG+TGG - tig0023178:67509-67528 Msa1406060:CDS 25.0%
! AAATCTTTTATGTAGCTGTG+GGG + tig0023178:64629-64648 None:intergenic 30.0%
! CAAATCTTTTATGTAGCTGT+GGG + tig0023178:64630-64649 None:intergenic 30.0%
! ACAAATCTTTTATGTAGCTG+TGG + tig0023178:64631-64650 None:intergenic 30.0%
ACAGCTACATAAAAGATTTG+TGG - tig0023178:64630-64649 Msa1406060:three_prime_UTR 30.0%
! ATCAACTGCATAATCGTTTT+CGG + tig0023178:64691-64710 None:intergenic 30.0%
! CTTTATTTGAAGAGAATGCA+AGG - tig0023178:64766-64785 Msa1406060:three_prime_UTR 30.0%
AAAAGATGATCAGAAGAAGA+AGG + tig0023178:64808-64827 None:intergenic 30.0%
AATGCTAATCATTCAAATGG+AGG - tig0023178:64895-64914 Msa1406060:three_prime_UTR 30.0%
ATGCTAATCATTCAAATGGA+GGG - tig0023178:64896-64915 Msa1406060:three_prime_UTR 30.0%
AAGAAACACCAACTATTCTT+TGG + tig0023178:65270-65289 None:intergenic 30.0%
!! GGTTTTATGTAAGTTTGCAA+TGG - tig0023178:65589-65608 Msa1406060:intron 30.0%
TATGTAAGTTTGCAATGGTT+TGG - tig0023178:65594-65613 Msa1406060:intron 30.0%
ATGTAAGTTTGCAATGGTTT+GGG - tig0023178:65595-65614 Msa1406060:intron 30.0%
TGAAAACTTGAAACAGAGTT+AGG - tig0023178:65696-65715 Msa1406060:intron 30.0%
! GAGCTAAATTTTCATCTCAT+AGG + tig0023178:65792-65811 None:intergenic 30.0%
TCTACAATCAAGTAATAGGT+GGG + tig0023178:66044-66063 None:intergenic 30.0%
CTAGTCTACAATCAAGTAAT+AGG + tig0023178:66048-66067 None:intergenic 30.0%
TTAAATTACTATGTGGGTAG+TGG - tig0023178:66125-66144 Msa1406060:intron 30.0%
TAAATTACTATGTGGGTAGT+GGG - tig0023178:66126-66145 Msa1406060:intron 30.0%
! AATTTGTTTGTGCAATGTAG+AGG + tig0023178:66646-66665 None:intergenic 30.0%
ATTGCACAAACAAATTCTTG+AGG - tig0023178:66650-66669 Msa1406060:intron 30.0%
TCACAGATTTACAAACTTCT+TGG - tig0023178:66731-66750 Msa1406060:CDS 30.0%
TTAGAATCAGCTATCTGTTT+AGG + tig0023178:66828-66847 None:intergenic 30.0%
ACACACCCAATATAAGAAAA+TGG + tig0023178:67086-67105 None:intergenic 30.0%
! TTTTCTTATATTGGGTGTGT+AGG - tig0023178:67086-67105 Msa1406060:CDS 30.0%
TAGAAATGTTACAATGAGAG+TGG - tig0023178:67124-67143 Msa1406060:intron 30.0%
AAACAAGAATTCTCAAGGTT+GGG + tig0023178:67204-67223 None:intergenic 30.0%
AAAACAAGAATTCTCAAGGT+TGG + tig0023178:67205-67224 None:intergenic 30.0%
AGGTAAAACAAGAATTCTCA+AGG + tig0023178:67209-67228 None:intergenic 30.0%
GCTTGAACAAGATCTATAAA+AGG - tig0023178:67278-67297 Msa1406060:CDS 30.0%
GATTTGATGAGTGATTGTTC+CGG + tig0023178:64425-64444 None:intergenic 35.0%
GTTCGGATTCAAGAAAACAT+AGG - tig0023178:64512-64531 Msa1406060:three_prime_UTR 35.0%
AGATTCTGTTACAGAAGAAG+TGG - tig0023178:64540-64559 Msa1406060:three_prime_UTR 35.0%
!! ATGCAGTTGATGAATGTTGA+AGG - tig0023178:64700-64719 Msa1406060:three_prime_UTR 35.0%
ATGAGAATGATTAGCAGAAC+CGG + tig0023178:64866-64885 None:intergenic 35.0%
ATATGATGCATCATAGGGAT+TGG - tig0023178:65127-65146 Msa1406060:three_prime_UTR 35.0%
CTATCATTGGAAGACATATG+AGG + tig0023178:65174-65193 None:intergenic 35.0%
TTGTGCTTCCAAAGAATAGT+TGG - tig0023178:65259-65278 Msa1406060:intron 35.0%
ATATCTCAAGCGCTTATGTA+TGG - tig0023178:65504-65523 Msa1406060:intron 35.0%
TTATGTATGGTATAAGCGCT+TGG - tig0023178:65517-65536 Msa1406060:intron 35.0%
AAGTACTTGTGAGACAGTTT+GGG + tig0023178:65969-65988 None:intergenic 35.0%
GTCTACAATCAAGTAATAGG+TGG + tig0023178:66045-66064 None:intergenic 35.0%
! GGAAGTATATGAAGATTCCA+CGG - tig0023178:66671-66690 Msa1406060:intron 35.0%
! CAAATTGTAATTTAGCTCCG+TGG + tig0023178:66691-66710 None:intergenic 35.0%
AATTCCTGTCACGTAAATGT+AGG - tig0023178:66765-66784 Msa1406060:CDS 35.0%
AGAAGAAGGTTAACACTTTC+AGG + tig0023178:66923-66942 None:intergenic 35.0%
ATGTTACAATGAGAGTGGAA+AGG - tig0023178:67129-67148 Msa1406060:intron 35.0%
TGTTACAATGAGAGTGGAAA+GGG - tig0023178:67130-67149 Msa1406060:intron 35.0%
AACAAGAATTCTCAAGGTTG+GGG + tig0023178:67203-67222 None:intergenic 35.0%
CTAGAATAATGAATGGTCAC+AGG + tig0023178:67229-67248 None:intergenic 35.0%
CTGTGACCATTCATTATTCT+AGG - tig0023178:67227-67246 Msa1406060:CDS 35.0%
ATCCCTTGATCAAAAGAACT+AGG - tig0023178:67254-67273 Msa1406060:CDS 35.0%
!! CTCCTAGTTCTTTTGATCAA+GGG + tig0023178:67259-67278 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + tig0023178:67379-67398 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - tig0023178:67378-67397 Msa1406060:intron 35.0%
TGCATAGATCTTGTTCAAGA+GGG + tig0023178:67475-67494 None:intergenic 35.0%
ACTTTATGAAGCCTTTCTTG+TGG - tig0023178:67581-67600 Msa1406060:CDS 35.0%
AACAGACGAAGAACGTGTAA+CGG - tig0023178:64234-64253 Msa1406060:three_prime_UTR 40.0%
AGATTCGGCTGTTAGAACAA+CGG - tig0023178:64573-64592 Msa1406060:three_prime_UTR 40.0%
GAACAACGGAGACGATAAAA+AGG - tig0023178:64587-64606 Msa1406060:three_prime_UTR 40.0%
TGGATGTTGTTGCTCATCTT+GGG - tig0023178:64650-64669 Msa1406060:three_prime_UTR 40.0%
TCATCTTGGGATAAAGAACG+CGG - tig0023178:64663-64682 Msa1406060:three_prime_UTR 40.0%
AATCATTCAAATGGAGGGCA+TGG - tig0023178:64901-64920 Msa1406060:three_prime_UTR 40.0%
ATTGACATCATACTCGAAGG+TGG + tig0023178:65006-65025 None:intergenic 40.0%
TGATGTCCCATACCAATCAT+AGG + tig0023178:65033-65052 None:intergenic 40.0%
TGAGGATGAGAATGTGGATT+CGG + tig0023178:65156-65175 None:intergenic 40.0%
GACATATGAGGATGAGAATG+TGG + tig0023178:65162-65181 None:intergenic 40.0%
! GGAAGCACAATGAAAAGTGA+TGG + tig0023178:65249-65268 None:intergenic 40.0%
CAAGTACTTGTGAGACAGTT+TGG + tig0023178:65970-65989 None:intergenic 40.0%
GTATGAGAGTGAGTTCTGTT+AGG + tig0023178:66022-66041 None:intergenic 40.0%
ACAGCACAATGAAATGGGTA+AGG + tig0023178:66269-66288 None:intergenic 40.0%
GGATGACAGCACAATGAAAT+GGG + tig0023178:66274-66293 None:intergenic 40.0%
! ATGGTCTTTGCTGTCTGATT+TGG - tig0023178:66367-66386 Msa1406060:intron 40.0%
!! ACTGAGAGTGTTGATCAATC+CGG + tig0023178:66507-66526 None:intergenic 40.0%
!! AGCAATGGTTCTGAAGAAGA+AGG + tig0023178:66937-66956 None:intergenic 40.0%
TATATTGGGTGTGTAGGACT+AGG - tig0023178:67092-67111 Msa1406060:CDS 40.0%
GTTACAATGAGAGTGGAAAG+GGG - tig0023178:67131-67150 Msa1406060:intron 40.0%
!! GCTCCTAGTTCTTTTGATCA+AGG + tig0023178:67260-67279 None:intergenic 40.0%
AGATCTATAAAAGGGCAACC+TGG - tig0023178:67287-67306 Msa1406060:CDS 40.0%
CGTACAATACACCAAATGGT+GGG + tig0023178:67353-67372 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + tig0023178:67384-67403 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + tig0023178:67385-67404 None:intergenic 40.0%
GTTGTTGTCATGTGACTGTA+AGG + tig0023178:67429-67448 None:intergenic 40.0%
GCATAGATCTTGTTCAAGAG+GGG + tig0023178:67474-67493 None:intergenic 40.0%
CTGCATAGATCTTGTTCAAG+AGG + tig0023178:67476-67495 None:intergenic 40.0%
TGAAGCCTTTCTTGTGGATA+AGG - tig0023178:67587-67606 Msa1406060:CDS 40.0%
! ACAAGCCTTATCCACAAGAA+AGG + tig0023178:67595-67614 None:intergenic 40.0%
TGATTGTTCCGGAGTTGCTT+CGG + tig0023178:64414-64433 None:intergenic 45.0%
CAAATCAATCAACCCGTGTC+CGG - tig0023178:64439-64458 Msa1406060:three_prime_UTR 45.0%
TTCAACGTCTTCTACTTCGC+CGG + tig0023178:64461-64480 None:intergenic 45.0%
AGTGGAAGCTGAAGCAGATT+CGG - tig0023178:64558-64577 Msa1406060:three_prime_UTR 45.0%
GTGGATGTTGTTGCTCATCT+TGG - tig0023178:64649-64668 Msa1406060:three_prime_UTR 45.0%
! TCAAATGGAGGGCATGGAAA+TGG - tig0023178:64907-64926 Msa1406060:three_prime_UTR 45.0%
!! GGCATTGACATCATACTCGA+AGG + tig0023178:65009-65028 None:intergenic 45.0%
ATGTCAATGCCGCCTATGAT+TGG - tig0023178:65018-65037 Msa1406060:three_prime_UTR 45.0%
AATGCCGCCTATGATTGGTA+TGG - tig0023178:65023-65042 Msa1406060:three_prime_UTR 45.0%
ATGCCGCCTATGATTGGTAT+GGG - tig0023178:65024-65043 Msa1406060:three_prime_UTR 45.0%
TGTCCCATACCAATCATAGG+CGG + tig0023178:65030-65049 None:intergenic 45.0%
GTATGGGACATCATCCACAT+GGG - tig0023178:65040-65059 Msa1406060:three_prime_UTR 45.0%
ACATCATCCACATGGGCATA+TGG - tig0023178:65047-65066 Msa1406060:three_prime_UTR 45.0%
CATCATCCACATGGGCATAT+GGG - tig0023178:65048-65067 Msa1406060:three_prime_UTR 45.0%
ATCATCCACATGGGCATATG+GGG - tig0023178:65049-65068 Msa1406060:three_prime_UTR 45.0%
TCTTCAGGTCAGCAATCACA+TGG - tig0023178:65221-65240 Msa1406060:three_prime_UTR 45.0%
CGGATGACAGCACAATGAAA+TGG + tig0023178:66275-66294 None:intergenic 45.0%
ATTGTGCTGTCATCCGCATA+TGG - tig0023178:66279-66298 Msa1406060:intron 45.0%
!! CTGAGAGTGTTGATCAATCC+GGG + tig0023178:66506-66525 None:intergenic 45.0%
TCCTGTCACGTAAATGTAGG+CGG - tig0023178:66768-66787 Msa1406060:CDS 45.0%
TAGGCGGTGATTGTGAGTTA+AGG - tig0023178:66784-66803 Msa1406060:CDS 45.0%
ACCACAGAGCAGGTTACAAA+TGG + tig0023178:66997-67016 None:intergenic 45.0%
GAACATTGATACCACAGAGC+AGG + tig0023178:67007-67026 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + tig0023178:67354-67373 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + tig0023178:67357-67376 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - tig0023178:67389-67408 Msa1406060:intron 45.0%
TCATGTGACTGTAAGGTCAC+GGG + tig0023178:67422-67441 None:intergenic 45.0%
GTCATGTGACTGTAAGGTCA+CGG + tig0023178:67423-67442 None:intergenic 45.0%
TTGTTCAAGAGGGGTAACCT+TGG + tig0023178:67465-67484 None:intergenic 45.0%
! ACGAAGAACGTGTAACGGAG+TGG - tig0023178:64239-64258 Msa1406060:three_prime_UTR 50.0%
! CGAAGAACGTGTAACGGAGT+GGG - tig0023178:64240-64259 Msa1406060:three_prime_UTR 50.0%
! ACGTGTAACGGAGTGGGAAA+AGG - tig0023178:64246-64265 Msa1406060:three_prime_UTR 50.0%
! CGTGTAACGGAGTGGGAAAA+GGG - tig0023178:64247-64266 Msa1406060:three_prime_UTR 50.0%
GAGTGAGATCGTGGAGGTTA+GGG + tig0023178:64276-64295 None:intergenic 50.0%
AAAGAGGAGTGAGATCGTGG+AGG + tig0023178:64282-64301 None:intergenic 50.0%
TGGAAAGAGGAGTGAGATCG+TGG + tig0023178:64285-64304 None:intergenic 50.0%
CGATCTCACTCCTCTTTCCA+TGG - tig0023178:64285-64304 Msa1406060:three_prime_UTR 50.0%
GGGATCAAAGCCATGGAAAG+AGG + tig0023178:64298-64317 None:intergenic 50.0%
!! TTCCATGGCTTTGATCCCAC+CGG - tig0023178:64300-64319 Msa1406060:three_prime_UTR 50.0%
GGTTGACGTCGAAGAGAGTA+CGG + tig0023178:64363-64382 None:intergenic 50.0%
! AAGAGAGAGTGTGTTGCGAG+AGG + tig0023178:64389-64408 None:intergenic 50.0%
TCTCTTCTCCGAAGCAACTC+CGG - tig0023178:64403-64422 Msa1406060:three_prime_UTR 50.0%
GACGATAAAAAGGCCGAGGT+TGG - tig0023178:64597-64616 Msa1406060:three_prime_UTR 50.0%
!! TAAAAAGGCCGAGGTTGGTG+TGG - tig0023178:64602-64621 Msa1406060:three_prime_UTR 50.0%
CCGGTTTCATGCAAACTCTG+CGG + tig0023178:64847-64866 None:intergenic 50.0%
CCGCAGAGTTTGCATGAAAC+CGG - tig0023178:64844-64863 Msa1406060:three_prime_UTR 50.0%
! ATCATACTCGAAGGTGGTGG+TGG + tig0023178:65000-65019 None:intergenic 50.0%
GACATCATACTCGAAGGTGG+TGG + tig0023178:65003-65022 None:intergenic 50.0%
GGTATGGGACATCATCCACA+TGG - tig0023178:65039-65058 Msa1406060:three_prime_UTR 50.0%
GATGAGTTTGCCTCCTCCTT+CGG - tig0023178:65071-65090 Msa1406060:three_prime_UTR 50.0%
ATGAGTTTGCCTCCTCCTTC+GGG - tig0023178:65072-65091 Msa1406060:three_prime_UTR 50.0%
TAAGAGCTAGAACCACCCGA+AGG + tig0023178:65090-65109 None:intergenic 50.0%
GGATGAGAATGTGGATTCGG+AGG + tig0023178:65153-65172 None:intergenic 50.0%
! GTGTTGATCAATCCGGGCAA+TGG + tig0023178:66500-66519 None:intergenic 50.0%
ACCGCCTACATTTACGTGAC+AGG + tig0023178:66772-66791 None:intergenic 50.0%
! TCAGGAGTACACGCACTACA+CGG + tig0023178:66905-66924 None:intergenic 50.0%
GCCATTTGTAACCTGCTCTG+TGG - tig0023178:66993-67012 Msa1406060:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG - tig0023178:67445-67464 Msa1406060:CDS 50.0%
GGAGTGAGATCGTGGAGGTT+AGG + tig0023178:64277-64296 None:intergenic 55.0%
TTCCGCTTTCAGCATCTCCC+CGG - tig0023178:64330-64349 Msa1406060:three_prime_UTR 55.0%
! AAGAGAGTACGGAGAGGCTC+CGG + tig0023178:64352-64371 None:intergenic 55.0%
! ACGTCGAAGAGAGTACGGAG+AGG + tig0023178:64358-64377 None:intergenic 55.0%
TCTTCTACTTCGCCGGACAC+GGG + tig0023178:64454-64473 None:intergenic 55.0%
GTCTTCTACTTCGCCGGACA+CGG + tig0023178:64455-64474 None:intergenic 55.0%
GAACCTGATCCATCTCGCTC+GGG + tig0023178:64496-64515 None:intergenic 55.0%
CGAACCTGATCCATCTCGCT+CGG + tig0023178:64497-64516 None:intergenic 55.0%
CGAGCGAGATGGATCAGGTT+CGG - tig0023178:64495-64514 Msa1406060:three_prime_UTR 55.0%
CGGAGACGATAAAAAGGCCG+AGG - tig0023178:64593-64612 Msa1406060:three_prime_UTR 55.0%
TCATGCAAACTCTGCGGCAC+AGG + tig0023178:64841-64860 None:intergenic 55.0%
! GGAGGGCATGGAAATGGACA+TGG - tig0023178:64913-64932 Msa1406060:three_prime_UTR 55.0%
!! GGTGGTGGTGGATAAGGCAT+AGG + tig0023178:64988-65007 None:intergenic 55.0%
!! CTCGAAGGTGGTGGTGGATA+AGG + tig0023178:64994-65013 None:intergenic 55.0%
CTCATCCCCATATGCCCATG+TGG + tig0023178:65057-65076 None:intergenic 55.0%
GGGGTTCTGCTCGTTTCTTC+AGG - tig0023178:65206-65225 Msa1406060:three_prime_UTR 55.0%
ACTGAAGCTCCTGCATACGC+AGG - tig0023178:67313-67332 Msa1406060:CDS 55.0%
CTGAAGCTCCTGCATACGCA+GGG - tig0023178:67314-67333 Msa1406060:CDS 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + tig0023178:67410-67429 None:intergenic 55.0%
CTCCGGTGGGATCAAAGCCA+TGG + tig0023178:64305-64324 None:intergenic 60.0%
CTGAAAGCGGAAGCGAGCTC+CGG + tig0023178:64322-64341 None:intergenic 60.0%
CTCCGGGGAGATGCTGAAAG+CGG + tig0023178:64335-64354 None:intergenic 60.0%
! AGAGAGTACGGAGAGGCTCC+GGG + tig0023178:64351-64370 None:intergenic 60.0%
AGAGTGTGTTGCGAGAGGCG+CGG + tig0023178:64384-64403 None:intergenic 60.0%
GACGAAGAACCCGAGCGAGA+TGG - tig0023178:64484-64503 Msa1406060:three_prime_UTR 60.0%
GAACCCGAGCGAGATGGATC+AGG - tig0023178:64490-64509 Msa1406060:three_prime_UTR 60.0%
TGTGGGGTCCACACCAACCT+CGG + tig0023178:64613-64632 None:intergenic 60.0%
AGTTTGCCTCCTCCTTCGGG+TGG - tig0023178:65075-65094 Msa1406060:three_prime_UTR 60.0%
CTAGAACCACCCGAAGGAGG+AGG + tig0023178:65084-65103 None:intergenic 60.0%
GAGCTAGAACCACCCGAAGG+AGG + tig0023178:65087-65106 None:intergenic 60.0%
TGCAGGAGCTTCAGTGCACC+AGG + tig0023178:67308-67327 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + tig0023178:67341-67360 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + tig0023178:67456-67475 None:intergenic 60.0%
AAGCGGAAGCGAGCTCCGGT+GGG + tig0023178:64318-64337 None:intergenic 65.0%
AAAGCGGAAGCGAGCTCCGG+TGG + tig0023178:64319-64338 None:intergenic 65.0%
! GAGAGTACGGAGAGGCTCCG+GGG + tig0023178:64350-64369 None:intergenic 65.0%
GCTCCTGCATACGCAGGGTC+CGG - tig0023178:67319-67338 Msa1406060:CDS 65.0%
CTCCTGCATACGCAGGGTCC+GGG - tig0023178:67320-67339 Msa1406060:CDS 65.0%
TTCCCGGACCCTGCGTATGC+AGG + tig0023178:67325-67344 None:intergenic 65.0%
TGCATACGCAGGGTCCGGGA+AGG - tig0023178:67324-67343 Msa1406060:CDS 65.0%
GCATACGCAGGGTCCGGGAA+GGG - tig0023178:67325-67344 Msa1406060:CDS 65.0%
CATACGCAGGGTCCGGGAAG+GGG - tig0023178:67326-67345 Msa1406060:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG - tig0023178:67339-67358 Msa1406060:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0023178 gene 64217 67659 64217 ID=Msa1406060;Name=Msa1406060
tig0023178 mRNA 64217 67659 64217 ID=Msa1406060-mRNA-1;Parent=Msa1406060;Name=Msa1406060-mRNA-1;_AED=0.09;_eAED=0.10;_QI=0|0|0.2|1|0|0|5|1042|307
tig0023178 exon 64217 65272 64217 ID=Msa1406060-mRNA-1:exon:24402;Parent=Msa1406060-mRNA-1
tig0023178 exon 66684 67119 66684 ID=Msa1406060-mRNA-1:exon:24401;Parent=Msa1406060-mRNA-1
tig0023178 exon 67138 67364 67138 ID=Msa1406060-mRNA-1:exon:24400;Parent=Msa1406060-mRNA-1
tig0023178 exon 67402 67409 67402 ID=Msa1406060-mRNA-1:exon:24399;Parent=Msa1406060-mRNA-1
tig0023178 exon 67421 67659 67421 ID=Msa1406060-mRNA-1:exon:24398;Parent=Msa1406060-mRNA-1
tig0023178 CDS 67421 67659 67421 ID=Msa1406060-mRNA-1:cds;Parent=Msa1406060-mRNA-1
tig0023178 CDS 67402 67409 67402 ID=Msa1406060-mRNA-1:cds;Parent=Msa1406060-mRNA-1
tig0023178 CDS 67138 67364 67138 ID=Msa1406060-mRNA-1:cds;Parent=Msa1406060-mRNA-1
tig0023178 CDS 66684 67119 66684 ID=Msa1406060-mRNA-1:cds;Parent=Msa1406060-mRNA-1
tig0023178 CDS 65259 65272 65259 ID=Msa1406060-mRNA-1:cds;Parent=Msa1406060-mRNA-1
tig0023178 three_prime_UTR 64217 65258 64217 ID=Msa1406060-mRNA-1:three_prime_utr;Parent=Msa1406060-mRNA-1
Gene Sequence

>Msa1406060

ATGGGTGAAGAGGTTCGAACAGACGAAGAACGTGTAACGGAGTGGGAAAAGGGTCTCCCTAACCTCCACGATCTCACTCCTCTTTCCATGGCTTTGATCCCACCGGAGCTCGCTTCCGCTTTCAGCATCTCCCCGGAGCCTCTCCGTACTCTCTTCGACGTCAACCGCGCCTCTCGCAACACACTCTCTCTTCTCCGAAGCAACTCCGGAACAATCACTCATCAAATCAATCAACCCGTTAGAAGACGTTCGGATTCAAGAAAACATAGGAAAATAGATTCTGTTACAGAAGAAGTGGAAGCTGAAGCAGATTCGGCTGTTAGAACAACGGAGACGATAAAAAGGCCGAGGTTGGTGTGGACCCCACAGCTACATAAAAGATTTGTGGATGTTGTTGCTCATCTTGGGATAAAGAACGCGGTTCCGAAAACGATTATGCAGTTGATGAATGTTGAAGGATTAACAAGAGAAAATAAATATCGTCTTTATTTGAAGAGAATGCAAGGGCTGTCAAATGATGCACCTTCTTCTTCTGATCATCTTTTTGCTTCTACACCTGTGCCGCAGAGTTTGCATGAAACCGGTTCTGCTAATCATTCTCATTCACATTCAAATGCTAATCATTCAAATGGAGGGCATGGAAATGGACATGGAAATTTGCATTCTCATTCACATTCACATTCGCATCATTCTGTGACGATTCCTATGCCTTATCCACCACCACCTTCGAGTATGATGTCAATGCCGCCTATGATTGGTATGGGACATCATCCACATGGGCATATGGGGATGAGTTTGCCTCCTCCTTCGGGTGGTTCTAGCTCTTATCGCTCGCATCCATTTAATATGATGCATCATAGGGATTGGCCTCCGAATCCACATTCTCATCCTCATATGTCTTCCAATGATAATTCAAATGTTTGA
Protein sequence

>Msa1406060

MGEEVRTDEERVTEWEKGLPNLHDLTPLSMALIPPELASAFSISPEPLRTLFDVNRASRNTLSLLRSNSGTITHQINQPVRRRSDSRKHRKIDSVTEEVEAEADSAVRTTETIKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENKYRLYLKRMQGLSNDAPSSSDHLFASTPVPQSLHETGSANHSHSHSNANHSNGGHGNGHGNLHSHSHSHSHHSVTIPMPYPPPPSSMMSMPPMIGMGHHPHGHMGMSLPPPSGGSSSYRSHPFNMMHHRDWPPNPHSHPHMSSNDNSNV*