Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1407150 | XP_024639602.1 | 97.845 | 789 | 14 | 2 | 1 | 789 | 1 | 786 | 0.0 | 1616 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1407150 | sp|Q9SZL8|FRS5_ARATH | 70.705 | 809 | 195 | 8 | 1 | 789 | 2 | 788 | 0.0 | 1159 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1407150 | A0A396HY09 | 97.845 | 789 | 14 | 2 | 1 | 789 | 1 | 786 | 0.0 | 1616 |
Gene ID | Type | Classification |
---|---|---|
Msa1407150 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1367700 | Msa1407150 | 0.844736 | 6.286174e-59 | -8.615850e-47 |
Msa1407150 | Msa1432090 | 0.883983 | 2.826154e-71 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1407150 | MtrunA17_Chr5g0448761 | 97.845 | 789 | 14 | 2 | 1 | 789 | 1 | 786 | 0.0 | 1616 |
Msa1407150 | MtrunA17_Chr5g0448511 | 54.352 | 563 | 238 | 3 | 229 | 787 | 1 | 548 | 0.0 | 646 |
Msa1407150 | MtrunA17_Chr5g0440451 | 40.563 | 710 | 378 | 9 | 22 | 713 | 4 | 687 | 0.0 | 551 |
Msa1407150 | MtrunA17_Chr1g0202341 | 40.611 | 655 | 367 | 7 | 56 | 702 | 44 | 684 | 9.85e-173 | 513 |
Msa1407150 | MtrunA17_Chr3g0118611 | 45.818 | 550 | 266 | 6 | 177 | 704 | 36 | 575 | 9.64e-169 | 506 |
Msa1407150 | MtrunA17_Chr2g0329031 | 36.890 | 656 | 368 | 15 | 62 | 708 | 13 | 631 | 6.67e-142 | 436 |
Msa1407150 | MtrunA17_Chr1g0207551 | 35.957 | 648 | 398 | 9 | 44 | 690 | 15 | 646 | 2.95e-141 | 436 |
Msa1407150 | MtrunA17_Chr3g0080351 | 35.127 | 669 | 378 | 11 | 55 | 707 | 68 | 696 | 1.18e-140 | 436 |
Msa1407150 | MtrunA17_Chr2g0287061 | 36.767 | 631 | 345 | 12 | 61 | 689 | 181 | 759 | 2.46e-125 | 394 |
Msa1407150 | MtrunA17_Chr2g0287061 | 36.449 | 107 | 51 | 2 | 62 | 168 | 28 | 117 | 2.62e-13 | 73.9 |
Msa1407150 | MtrunA17_Chr5g0441581 | 34.789 | 664 | 389 | 17 | 62 | 716 | 31 | 659 | 3.06e-124 | 388 |
Msa1407150 | MtrunA17_Chr3g0082121 | 34.380 | 637 | 396 | 7 | 60 | 694 | 40 | 656 | 2.18e-120 | 378 |
Msa1407150 | MtrunA17_Chr2g0296781 | 36.851 | 578 | 337 | 12 | 67 | 633 | 1 | 561 | 1.07e-119 | 377 |
Msa1407150 | MtrunA17_Chr6g0458391 | 34.039 | 567 | 347 | 7 | 63 | 628 | 225 | 765 | 6.27e-111 | 355 |
Msa1407150 | MtrunA17_Chr6g0458391 | 34.694 | 147 | 84 | 4 | 61 | 200 | 89 | 230 | 2.79e-17 | 86.7 |
Msa1407150 | MtrunA17_Chr2g0324011 | 33.101 | 574 | 373 | 9 | 60 | 631 | 7 | 571 | 1.00e-106 | 339 |
Msa1407150 | MtrunA17_Chr8g0363841 | 34.859 | 568 | 357 | 10 | 66 | 629 | 20 | 578 | 1.47e-106 | 341 |
Msa1407150 | MtrunA17_Chr6g0477261 | 39.821 | 447 | 252 | 7 | 197 | 633 | 11 | 450 | 5.41e-104 | 334 |
Msa1407150 | MtrunA17_Chr1g0203721 | 30.818 | 636 | 415 | 8 | 66 | 691 | 66 | 686 | 7.54e-104 | 340 |
Msa1407150 | MtrunA17_Chr2g0291581 | 32.917 | 641 | 396 | 16 | 63 | 694 | 71 | 686 | 8.58e-104 | 334 |
Msa1407150 | MtrunA17_Chr2g0287651 | 32.389 | 565 | 370 | 8 | 67 | 629 | 79 | 633 | 3.21e-101 | 332 |
Msa1407150 | MtrunA17_Chr1g0196541 | 33.276 | 577 | 365 | 11 | 67 | 636 | 1 | 564 | 1.67e-98 | 321 |
Msa1407150 | MtrunA17_Chr2g0291591 | 35.146 | 515 | 299 | 14 | 62 | 564 | 63 | 554 | 9.49e-96 | 309 |
Msa1407150 | MtrunA17_Chr1g0203051 | 29.091 | 550 | 376 | 7 | 69 | 616 | 85 | 622 | 1.37e-87 | 290 |
Msa1407150 | MtrunA17_Chr1g0198761 | 30.511 | 626 | 394 | 14 | 37 | 640 | 14 | 620 | 8.21e-84 | 283 |
Msa1407150 | MtrunA17_Chr2g0276841 | 29.291 | 635 | 416 | 14 | 63 | 687 | 70 | 681 | 1.39e-82 | 278 |
Msa1407150 | MtrunA17_Chr2g0294841 | 28.193 | 642 | 435 | 13 | 60 | 692 | 42 | 666 | 1.91e-82 | 279 |
Msa1407150 | MtrunA17_Chr2g0290391 | 29.318 | 689 | 425 | 20 | 37 | 697 | 22 | 676 | 7.15e-73 | 251 |
Msa1407150 | MtrunA17_Chr5g0431001 | 31.136 | 440 | 284 | 9 | 55 | 481 | 50 | 483 | 1.05e-62 | 219 |
Msa1407150 | MtrunA17_Chr1g0164591 | 34.579 | 321 | 197 | 4 | 144 | 463 | 1 | 309 | 4.73e-60 | 206 |
Msa1407150 | MtrunA17_Chr7g0258861 | 37.113 | 291 | 173 | 6 | 60 | 347 | 7 | 290 | 7.00e-54 | 189 |
Msa1407150 | MtrunA17_Chr4g0033611 | 42.857 | 154 | 76 | 4 | 24 | 170 | 30 | 178 | 4.08e-28 | 114 |
Msa1407150 | MtrunA17_Chr3g0078041 | 52.778 | 108 | 48 | 2 | 62 | 169 | 49 | 153 | 1.24e-27 | 112 |
Msa1407150 | MtrunA17_Chr2g0329421 | 54.128 | 109 | 45 | 3 | 62 | 170 | 26 | 129 | 5.98e-26 | 106 |
Msa1407150 | MtrunA17_Chr7g0233911 | 51.852 | 108 | 49 | 3 | 62 | 169 | 33 | 137 | 1.92e-25 | 105 |
Msa1407150 | MtrunA17_Chr2g0329361 | 44.737 | 114 | 61 | 2 | 61 | 174 | 59 | 170 | 2.93e-25 | 105 |
Msa1407150 | MtrunA17_Chr2g0308841 | 23.982 | 221 | 167 | 1 | 408 | 627 | 6 | 226 | 2.12e-23 | 100 |
Msa1407150 | MtrunA17_Chr1g0149131 | 30.909 | 110 | 76 | 0 | 348 | 457 | 1 | 110 | 1.37e-16 | 76.6 |
Msa1407150 | MtrunA17_Chr5g0401121 | 39.640 | 111 | 64 | 2 | 63 | 173 | 56 | 163 | 1.41e-16 | 78.2 |
Msa1407150 | MtrunA17_Chr2g0331371 | 40.164 | 122 | 65 | 4 | 61 | 178 | 51 | 168 | 9.04e-13 | 68.2 |
Msa1407150 | MtrunA17_Chr1g0171741 | 33.621 | 116 | 70 | 3 | 67 | 180 | 137 | 247 | 1.91e-12 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1407150 | AT4G38180.1 | 70.705 | 809 | 195 | 8 | 1 | 789 | 2 | 788 | 0.0 | 1159 |
Msa1407150 | AT2G27110.2 | 46.178 | 641 | 305 | 9 | 57 | 696 | 43 | 644 | 0.0 | 587 |
Msa1407150 | AT2G27110.1 | 46.178 | 641 | 305 | 9 | 57 | 696 | 43 | 644 | 0.0 | 587 |
Msa1407150 | AT4G38170.1 | 48.540 | 548 | 261 | 5 | 241 | 787 | 18 | 545 | 0.0 | 547 |
Msa1407150 | AT2G27110.3 | 52.778 | 468 | 213 | 3 | 229 | 696 | 40 | 499 | 3.29e-177 | 526 |
Msa1407150 | AT4G15090.1 | 36.078 | 668 | 411 | 9 | 50 | 715 | 38 | 691 | 3.27e-150 | 460 |
Msa1407150 | AT4G15090.5 | 36.078 | 668 | 411 | 9 | 50 | 715 | 38 | 691 | 3.27e-150 | 460 |
Msa1407150 | AT4G15090.3 | 36.078 | 668 | 411 | 9 | 50 | 715 | 38 | 691 | 3.27e-150 | 460 |
Msa1407150 | AT4G15090.2 | 36.078 | 668 | 411 | 9 | 50 | 715 | 38 | 691 | 3.27e-150 | 460 |
Msa1407150 | AT4G15090.4 | 36.078 | 668 | 411 | 9 | 50 | 715 | 38 | 691 | 3.27e-150 | 460 |
Msa1407150 | AT3G22170.2 | 34.795 | 684 | 390 | 10 | 24 | 690 | 30 | 674 | 6.95e-143 | 441 |
Msa1407150 | AT3G22170.1 | 34.795 | 684 | 390 | 10 | 24 | 690 | 30 | 674 | 6.95e-143 | 441 |
Msa1407150 | AT1G76320.3 | 36.943 | 628 | 361 | 12 | 67 | 688 | 1 | 599 | 1.69e-133 | 412 |
Msa1407150 | AT5G18960.2 | 37.143 | 630 | 337 | 12 | 62 | 687 | 210 | 784 | 3.47e-133 | 415 |
Msa1407150 | AT5G18960.2 | 39.837 | 123 | 48 | 4 | 46 | 168 | 35 | 131 | 7.08e-17 | 85.9 |
Msa1407150 | AT5G18960.1 | 37.143 | 630 | 337 | 12 | 62 | 687 | 210 | 784 | 3.47e-133 | 415 |
Msa1407150 | AT5G18960.1 | 39.837 | 123 | 48 | 4 | 46 | 168 | 35 | 131 | 7.08e-17 | 85.9 |
Msa1407150 | AT1G76320.1 | 36.943 | 628 | 361 | 12 | 67 | 688 | 1 | 599 | 8.52e-133 | 412 |
Msa1407150 | AT1G76320.4 | 36.943 | 628 | 361 | 12 | 67 | 688 | 1 | 599 | 8.52e-133 | 412 |
Msa1407150 | AT1G76320.2 | 36.943 | 628 | 361 | 12 | 67 | 688 | 1 | 599 | 9.46e-133 | 412 |
Msa1407150 | AT3G06250.2 | 36.090 | 665 | 349 | 15 | 40 | 687 | 155 | 760 | 3.31e-132 | 411 |
Msa1407150 | AT3G06250.2 | 41.667 | 108 | 46 | 3 | 61 | 168 | 26 | 116 | 1.06e-16 | 85.1 |
Msa1407150 | AT3G06250.1 | 36.090 | 665 | 349 | 15 | 40 | 687 | 155 | 760 | 3.31e-132 | 411 |
Msa1407150 | AT3G06250.1 | 41.667 | 108 | 46 | 3 | 61 | 168 | 26 | 116 | 1.06e-16 | 85.1 |
Msa1407150 | AT3G06250.3 | 36.090 | 665 | 349 | 15 | 40 | 687 | 155 | 760 | 3.31e-132 | 411 |
Msa1407150 | AT3G06250.3 | 41.667 | 108 | 46 | 3 | 61 | 168 | 26 | 116 | 1.06e-16 | 85.1 |
Msa1407150 | AT4G19990.3 | 35.148 | 643 | 354 | 15 | 60 | 686 | 18 | 613 | 1.65e-118 | 375 |
Msa1407150 | AT4G19990.4 | 35.148 | 643 | 354 | 15 | 60 | 686 | 18 | 613 | 1.65e-118 | 375 |
Msa1407150 | AT4G19990.5 | 35.148 | 643 | 354 | 15 | 60 | 686 | 18 | 613 | 2.09e-118 | 375 |
Msa1407150 | AT4G19990.7 | 35.148 | 643 | 354 | 15 | 60 | 686 | 32 | 627 | 3.75e-118 | 375 |
Msa1407150 | AT4G19990.6 | 35.148 | 643 | 354 | 15 | 60 | 686 | 18 | 613 | 7.01e-118 | 374 |
Msa1407150 | AT4G19990.2 | 35.148 | 643 | 354 | 15 | 60 | 686 | 18 | 613 | 7.01e-118 | 374 |
Msa1407150 | AT2G32250.5 | 33.132 | 661 | 386 | 9 | 25 | 685 | 1 | 605 | 1.60e-115 | 367 |
Msa1407150 | AT2G32250.2 | 33.132 | 661 | 386 | 9 | 25 | 685 | 1 | 605 | 3.53e-115 | 368 |
Msa1407150 | AT2G32250.4 | 33.132 | 661 | 386 | 9 | 25 | 685 | 1 | 605 | 3.53e-115 | 368 |
Msa1407150 | AT2G32250.6 | 33.585 | 661 | 383 | 9 | 25 | 685 | 1 | 605 | 5.08e-115 | 367 |
Msa1407150 | AT2G32250.1 | 33.585 | 661 | 383 | 9 | 25 | 685 | 1 | 605 | 5.08e-115 | 367 |
Msa1407150 | AT2G32250.3 | 33.585 | 661 | 383 | 9 | 25 | 685 | 1 | 605 | 5.08e-115 | 367 |
Msa1407150 | AT2G32250.7 | 33.603 | 619 | 356 | 8 | 67 | 685 | 1 | 564 | 2.16e-113 | 362 |
Msa1407150 | AT2G32250.8 | 33.603 | 619 | 356 | 8 | 67 | 685 | 1 | 564 | 2.26e-113 | 362 |
Msa1407150 | AT4G19990.1 | 33.777 | 601 | 335 | 15 | 102 | 686 | 3 | 556 | 3.50e-103 | 333 |
Msa1407150 | AT1G52520.1 | 31.019 | 677 | 420 | 19 | 35 | 694 | 56 | 702 | 1.58e-96 | 316 |
Msa1407150 | AT1G80010.1 | 30.488 | 656 | 404 | 17 | 63 | 693 | 95 | 723 | 2.69e-91 | 302 |
Msa1407150 | AT1G10240.2 | 28.080 | 698 | 462 | 17 | 18 | 705 | 3 | 670 | 2.77e-84 | 282 |
Msa1407150 | AT1G10240.1 | 28.080 | 698 | 462 | 17 | 18 | 705 | 3 | 670 | 2.77e-84 | 282 |
Msa1407150 | AT5G28530.1 | 31.399 | 586 | 361 | 15 | 63 | 627 | 55 | 620 | 3.19e-75 | 258 |
Msa1407150 | AT5G28530.3 | 31.399 | 586 | 357 | 16 | 63 | 627 | 55 | 616 | 5.58e-75 | 257 |
Msa1407150 | AT5G28530.2 | 31.399 | 586 | 357 | 16 | 63 | 627 | 55 | 616 | 5.58e-75 | 257 |
Msa1407150 | AT5G28530.4 | 28.522 | 575 | 329 | 16 | 63 | 627 | 55 | 557 | 4.28e-53 | 195 |
Msa1407150 | AT5G28530.5 | 28.522 | 575 | 325 | 17 | 63 | 627 | 55 | 553 | 7.93e-53 | 194 |
Msa1407150 | AT3G59470.3 | 43.429 | 175 | 78 | 5 | 12 | 170 | 3 | 172 | 6.39e-30 | 119 |
Msa1407150 | AT3G59470.1 | 43.429 | 175 | 78 | 5 | 12 | 170 | 3 | 172 | 6.39e-30 | 119 |
Msa1407150 | AT3G59470.2 | 43.429 | 175 | 78 | 5 | 12 | 170 | 15 | 184 | 7.75e-30 | 119 |
Msa1407150 | AT2G43280.1 | 45.455 | 143 | 68 | 4 | 37 | 177 | 1 | 135 | 1.01e-28 | 114 |
Msa1407150 | AT3G07500.1 | 47.368 | 133 | 65 | 3 | 39 | 170 | 8 | 136 | 1.60e-27 | 111 |
Msa1407150 | AT2G43280.2 | 48.039 | 102 | 48 | 3 | 78 | 177 | 2 | 100 | 4.32e-21 | 91.7 |
Msa1407150 | AT4G12850.2 | 42.982 | 114 | 55 | 3 | 58 | 168 | 3 | 109 | 1.04e-20 | 89.4 |
Msa1407150 | AT4G12850.4 | 42.982 | 114 | 55 | 3 | 58 | 168 | 3 | 109 | 2.54e-20 | 88.6 |
Msa1407150 | AT4G12850.1 | 42.982 | 114 | 55 | 3 | 58 | 168 | 3 | 109 | 2.65e-20 | 89.7 |
Find 199 sgRNAs with CRISPR-Local
Find 477 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTTCCCACCGGCAAATTTC+TGG | 0.095237 | tig0023272:+47655 | Msa1407150:CDS |
CAAAGAAGAAATTAGGATTT+TGG | 0.123283 | tig0023272:-47882 | None:intergenic |
ACCTTTATCAACAAATTTAA+AGG | 0.150987 | tig0023272:-49099 | None:intergenic |
TCATGTATATACTTACTATT+TGG | 0.183092 | tig0023272:+49037 | Msa1407150:CDS |
TTACCCTTTGCTCCCTTTAC+TGG | 0.199899 | tig0023272:+48042 | Msa1407150:CDS |
ACATATCATGTAGCTAAATT+TGG | 0.219908 | tig0023272:+48804 | Msa1407150:CDS |
CATGGTCAACCTGTTCTCTT+TGG | 0.223496 | tig0023272:+48075 | Msa1407150:CDS |
TGAACAGCAAAGAAGAAATT+AGG | 0.236435 | tig0023272:-47889 | None:intergenic |
CCTTCTTTGCAGACATATTC+TGG | 0.237940 | tig0023272:+48911 | Msa1407150:CDS |
AGAAGAAGAAGATGATGATT+TGG | 0.241377 | tig0023272:+47234 | Msa1407150:CDS |
TTTGCAACATCATAAGTTTC+AGG | 0.247657 | tig0023272:-49131 | None:intergenic |
GCCTTTAAATTTGTTGATAA+AGG | 0.252707 | tig0023272:+49098 | Msa1407150:CDS |
AACCCTAATTGACACTTTAC+AGG | 0.254986 | tig0023272:+47687 | Msa1407150:CDS |
TGAAACTCGGCTTCAAAGTT+TGG | 0.256048 | tig0023272:-48321 | None:intergenic |
CAGCCTGTAAAGTGTCAATT+AGG | 0.264947 | tig0023272:-47690 | None:intergenic |
TTGCAAACTGACGTTGCTTT+TGG | 0.278488 | tig0023272:-49003 | None:intergenic |
TAATATCTTGCAGGATGATA+TGG | 0.290977 | tig0023272:+53204 | Msa1407150:intron |
AATTTCTTCTTTGCTGTTCA+AGG | 0.292471 | tig0023272:+47892 | Msa1407150:CDS |
CACTTTACAGGCTGCTGGTA+TGG | 0.294110 | tig0023272:+47699 | Msa1407150:CDS |
TCTGCCAAGTGGATCGTATC+TGG | 0.294800 | tig0023272:+47577 | Msa1407150:CDS |
GTAGAATTTGATATTGGTTT+GGG | 0.307344 | tig0023272:+47139 | Msa1407150:CDS |
GGTAGAATTTGATATTGGTT+TGG | 0.326592 | tig0023272:+47138 | Msa1407150:CDS |
CTTAAAGAACTGATTTAAAC+TGG | 0.329541 | tig0023272:-48568 | None:intergenic |
GCGTTTGATCTCTCTGTCTT+TGG | 0.332960 | tig0023272:-47494 | None:intergenic |
AAGCAATACATTCCGCTTGC+AGG | 0.336808 | tig0023272:+48439 | Msa1407150:CDS |
TTGACGAATTTGAGTCTTGC+TGG | 0.341126 | tig0023272:+48370 | Msa1407150:CDS |
GTGTAATTCAACCTTGCCTT+GGG | 0.343488 | tig0023272:-47964 | None:intergenic |
CAGAAACGGTGACGAGTGTC+TGG | 0.344341 | tig0023272:-48240 | None:intergenic |
CTCCCCATCATCCTCAGCTT+TGG | 0.350878 | tig0023272:-48775 | None:intergenic |
GAAGAAGAAGATGATGATTT+GGG | 0.351944 | tig0023272:+47235 | Msa1407150:CDS |
TACATTCCGCTTGCAGGCAC+TGG | 0.358152 | tig0023272:+48445 | Msa1407150:CDS |
TTGTTTGTTTGTTTGTGGTT+TGG | 0.366669 | tig0023272:+47101 | Msa1407150:five_prime_UTR |
AGCATGAACTCTTACTTTGA+TGG | 0.369267 | tig0023272:+48528 | Msa1407150:CDS |
AGATTATCTCAACTTTATAA+AGG | 0.373588 | tig0023272:-53558 | None:intergenic |
TTGCAGATCCAGAAATTTGC+CGG | 0.376547 | tig0023272:-47663 | None:intergenic |
GGAGATGGGGTCCTCAATAC+TGG | 0.377437 | tig0023272:-48663 | None:intergenic |
AAACTGAAGCTTCCTTTGTC+TGG | 0.378773 | tig0023272:+48118 | Msa1407150:CDS |
GCTTTACTGAGGTTGATTGT+AGG | 0.379314 | tig0023272:+47779 | Msa1407150:CDS |
AACAAAATGGGGTTATTCAT+AGG | 0.382440 | tig0023272:-53478 | None:intergenic |
ACATGGCTTACCGCCATGTC+TGG | 0.388564 | tig0023272:+48150 | Msa1407150:CDS |
ACACTACTTACCGCTCTAAC+AGG | 0.393642 | tig0023272:+48013 | Msa1407150:CDS |
GAAACTCGGCTTCAAAGTTT+GGG | 0.402169 | tig0023272:-48320 | None:intergenic |
GGTATTTGTTTGTTTGTTTG+TGG | 0.403783 | tig0023272:+47096 | Msa1407150:five_prime_UTR |
CGGCTTCAAAGTTTGGGAAC+TGG | 0.404355 | tig0023272:-48314 | None:intergenic |
TCTGCACTCATCAAAGAGTA+TGG | 0.412149 | tig0023272:+47739 | Msa1407150:CDS |
GGTTGGCACGCTAACATTCA+TGG | 0.415317 | tig0023272:+48749 | Msa1407150:CDS |
ATGAGCTTGAGTGTGCAAAT+AGG | 0.424341 | tig0023272:+53251 | Msa1407150:CDS |
AGAATCGTGATCAGTGGTTA+TGG | 0.425259 | tig0023272:-48187 | None:intergenic |
CTTGCCTCTCCATCGGAGAT+GGG | 0.427432 | tig0023272:-48677 | None:intergenic |
AGGTTCCAGATCTCCGGCCT+CGG | 0.431500 | tig0023272:-47290 | None:intergenic |
TGGTTTGGGAGGAGAATATG+AGG | 0.434179 | tig0023272:+47153 | Msa1407150:CDS |
TATCTCAACTTTATAAAGGA+TGG | 0.439799 | tig0023272:-53554 | None:intergenic |
GGCCTGAAAACTCAAACATT+TGG | 0.440126 | tig0023272:-48890 | None:intergenic |
GAGGTGGTAGAATTTGATAT+TGG | 0.442215 | tig0023272:+47133 | Msa1407150:CDS |
CCATCAGCAATGGGAAGGTT+AGG | 0.443830 | tig0023272:+49216 | Msa1407150:CDS |
CGAAGGCAGTGAACCTGATC+GGG | 0.445748 | tig0023272:-47634 | None:intergenic |
TTGTTTGTTTGTGGTTTGGA+TGG | 0.447891 | tig0023272:+47105 | Msa1407150:exon |
CCAGAATATGTCTGCAAAGA+AGG | 0.449302 | tig0023272:-48911 | None:intergenic |
CCAACCCTTGTGACTGTTCG+TGG | 0.450668 | tig0023272:-47517 | None:intergenic |
CGAACTTGTTCCACCCGATC+AGG | 0.450679 | tig0023272:+47621 | Msa1407150:CDS |
ATCTCAACTTTATAAAGGAT+GGG | 0.450680 | tig0023272:-53553 | None:intergenic |
TGAGATGATGGACGAGGATG+AGG | 0.456458 | tig0023272:+47192 | Msa1407150:CDS |
CACTCGATTCCAAGAGGAGT+TGG | 0.457309 | tig0023272:+48728 | Msa1407150:CDS |
TTGGGAGAAAGCAGCGGCAG+CGG | 0.460216 | tig0023272:+47253 | Msa1407150:CDS |
TAATTACACTAGTGGCTGTC+AGG | 0.463053 | tig0023272:+49268 | Msa1407150:CDS |
AGCCTGTAAAGTGTCAATTA+GGG | 0.465989 | tig0023272:-47689 | None:intergenic |
GCGTGCCAACCAACTCCTCT+TGG | 0.469006 | tig0023272:-48737 | None:intergenic |
TTGCAACATCATAAGTTTCA+GGG | 0.472255 | tig0023272:-49130 | None:intergenic |
GGCTGTCAGGATGAAAGCTT+GGG | 0.472435 | tig0023272:+49281 | Msa1407150:CDS |
AATGTGTCTCGCAAATATAC+AGG | 0.473103 | tig0023272:-48471 | None:intergenic |
GCATCCAAAGCTGAGGATGA+TGG | 0.473156 | tig0023272:+48771 | Msa1407150:CDS |
TCTGGAACCTTCTGAGGGTA+TGG | 0.473420 | tig0023272:+47303 | Msa1407150:CDS |
TGGCTGTCAGGATGAAAGCT+TGG | 0.476969 | tig0023272:+49280 | Msa1407150:CDS |
ACTTTACAGGCTGCTGGTAT+GGG | 0.477051 | tig0023272:+47700 | Msa1407150:CDS |
AAAGCACAACCAAAGAGAAC+AGG | 0.481412 | tig0023272:-48084 | None:intergenic |
AGATATGCCACTTGCAGAAA+CGG | 0.486193 | tig0023272:-48254 | None:intergenic |
CATCCAAAGCTGAGGATGAT+GGG | 0.487357 | tig0023272:+48772 | Msa1407150:CDS |
CGGCCTCTGAGGAGGATTGT+GGG | 0.492172 | tig0023272:+53381 | Msa1407150:exon |
CCTAACCTTCCCATTGCTGA+TGG | 0.492796 | tig0023272:-49216 | None:intergenic |
TATAATGAGATGGAAGAGTA+AGG | 0.493011 | tig0023272:-48956 | None:intergenic |
TGATGGTTTACACCAGTAAA+GGG | 0.493735 | tig0023272:-48054 | None:intergenic |
CGGAGATCTGGAACCTTCTG+AGG | 0.494898 | tig0023272:+47297 | Msa1407150:CDS |
TGAATACTTTGCCAGTATTG+AGG | 0.495207 | tig0023272:+48652 | Msa1407150:CDS |
TTCACTGCCTTCGTTCCCAC+CGG | 0.499535 | tig0023272:+47644 | Msa1407150:CDS |
CGAGTCTGAAGAGGCTGCTA+AGG | 0.500073 | tig0023272:+47330 | Msa1407150:CDS |
ATGATCTCAGGGACAATGAA+TGG | 0.501996 | tig0023272:+48412 | Msa1407150:CDS |
CTCGTCACCGTTTCTGCAAG+TGG | 0.503151 | tig0023272:+48247 | Msa1407150:CDS |
GGTTCCAGATCTCCGGCCTC+GGG | 0.504308 | tig0023272:-47289 | None:intergenic |
AATTCCTATGCTCGTCGTGT+TGG | 0.505166 | tig0023272:+47361 | Msa1407150:CDS |
GAATTTGATATTGGTTTGGG+AGG | 0.506640 | tig0023272:+47142 | Msa1407150:CDS |
TAAGCATATCACGAAACTTA+CGG | 0.506729 | tig0023272:+53228 | Msa1407150:CDS |
ATGATGGTTTACACCAGTAA+AGG | 0.513575 | tig0023272:-48055 | None:intergenic |
AGTGTAATTCAACCTTGCCT+TGG | 0.518295 | tig0023272:-47965 | None:intergenic |
CTCATTATATACTCAAACGC+TGG | 0.519018 | tig0023272:+48970 | Msa1407150:CDS |
GAGACAATTCGTTTGTGCTA+AGG | 0.519061 | tig0023272:+47441 | Msa1407150:CDS |
TCTCAACTTTATAAAGGATG+GGG | 0.519857 | tig0023272:-53552 | None:intergenic |
AGCCCAGAAAACATTGGTGA+TGG | 0.521427 | tig0023272:-47938 | None:intergenic |
AAATGTGAGACAACTTCTCC+TGG | 0.528603 | tig0023272:-48287 | None:intergenic |
GGGAGTACATAGAAACAGAT+AGG | 0.530239 | tig0023272:+53401 | Msa1407150:three_prime_UTR |
GGAGAACTCCCATCAGCAAT+GGG | 0.531715 | tig0023272:+49207 | Msa1407150:CDS |
ATTGACACTTTACAGGCTGC+TGG | 0.532057 | tig0023272:+47694 | Msa1407150:CDS |
ACGGCCTCTGAGGAGGATTG+TGG | 0.532458 | tig0023272:+53380 | Msa1407150:exon |
GTTAGAGTTGTCAGTAAAGG+TGG | 0.534829 | tig0023272:+53333 | Msa1407150:CDS |
AGAGAACAGGTTGACCATGA+TGG | 0.535460 | tig0023272:-48071 | None:intergenic |
CAATTCGTTTGTGCTAAGGA+AGG | 0.537258 | tig0023272:+47445 | Msa1407150:CDS |
CTCAGAAGGTTCCAGATCTC+CGG | 0.537315 | tig0023272:-47296 | None:intergenic |
GAAACCAACACGACGAGCAT+AGG | 0.538449 | tig0023272:-47365 | None:intergenic |
ACGAAGGCAGTGAACCTGAT+CGG | 0.539597 | tig0023272:-47635 | None:intergenic |
TATGGTGGTATCAGCAAGGT+TGG | 0.539841 | tig0023272:+47757 | Msa1407150:CDS |
CAAGTTAGAGTTGTCAGTAA+AGG | 0.539938 | tig0023272:+53330 | Msa1407150:CDS |
TCTGGGCTGACCCCAAGGCA+AGG | 0.540324 | tig0023272:+47953 | Msa1407150:CDS |
GATCAGTGGTTATGGAGAGT+GGG | 0.543305 | tig0023272:-48179 | None:intergenic |
TCTCGTCGTTCTCGCCGCGA+CGG | 0.544434 | tig0023272:+47406 | Msa1407150:CDS |
GGGAGAACTCCCATCAGCAA+TGG | 0.547438 | tig0023272:+49206 | Msa1407150:CDS |
AATCGCCATAAAAGTTTACA+AGG | 0.550036 | tig0023272:+47817 | Msa1407150:CDS |
TGATCAGTGGTTATGGAGAG+TGG | 0.550534 | tig0023272:-48180 | None:intergenic |
GCCGCCGCATATTGAGATGA+TGG | 0.551096 | tig0023272:+47180 | Msa1407150:CDS |
ACACCAGTAAAGGGAGCAAA+GGG | 0.551736 | tig0023272:-48045 | None:intergenic |
ATAGGAAATGTGAAATGTAC+CGG | 0.556375 | tig0023272:+53269 | Msa1407150:CDS |
GTTAACACATTTGTGAAACT+CGG | 0.558202 | tig0023272:-48334 | None:intergenic |
TCGGATGCTTGCCTCTCCAT+CGG | 0.558570 | tig0023272:-48684 | None:intergenic |
AATTCGTTTGTGCTAAGGAA+GGG | 0.559501 | tig0023272:+47446 | Msa1407150:CDS |
GCGCAGGTAATGCGAAAGGA+GGG | 0.559887 | tig0023272:+49185 | Msa1407150:CDS |
GATGATGGACGAGGATGAGG+AGG | 0.560621 | tig0023272:+47195 | Msa1407150:CDS |
GCTATCACTTCGCTGAGTGA+TGG | 0.562682 | tig0023272:-48508 | None:intergenic |
CGATTCCAAGAGGAGTTGGT+TGG | 0.567024 | tig0023272:+48732 | Msa1407150:CDS |
GCATATCTTTAAGCAATGCC+AGG | 0.569808 | tig0023272:+48269 | Msa1407150:CDS |
TACACCAGTAAAGGGAGCAA+AGG | 0.570161 | tig0023272:-48046 | None:intergenic |
ATCAGTGGTTATGGAGAGTG+GGG | 0.575873 | tig0023272:-48178 | None:intergenic |
CTAACCTTCCCATTGCTGAT+GGG | 0.576542 | tig0023272:-49215 | None:intergenic |
AAATTTGCCGGTGGGAACGA+AGG | 0.578586 | tig0023272:-47651 | None:intergenic |
GCCCAGAAAACATTGGTGAT+GGG | 0.579481 | tig0023272:-47937 | None:intergenic |
TGCACGATTCTTCTGCCAAG+TGG | 0.580316 | tig0023272:+47566 | Msa1407150:CDS |
ACATTCCGCTTGCAGGCACT+GGG | 0.581089 | tig0023272:+48446 | Msa1407150:CDS |
ATTGAGGACCCCATCTCCGA+TGG | 0.581233 | tig0023272:+48668 | Msa1407150:CDS |
CCACGAACAGTCACAAGGGT+TGG | 0.582221 | tig0023272:+47517 | Msa1407150:CDS |
ATCATATCTGTCTAAAAGTG+TGG | 0.585384 | tig0023272:-48394 | None:intergenic |
TTTACTGGTGTAAACCATCA+TGG | 0.586662 | tig0023272:+48057 | Msa1407150:CDS |
ATGAAAGACGGCCTCTGAGG+AGG | 0.589614 | tig0023272:+53373 | Msa1407150:exon |
TGCAACATCATAAGTTTCAG+GGG | 0.590648 | tig0023272:-49129 | None:intergenic |
CTTCAAAGTTTGGGAACTGG+AGG | 0.598863 | tig0023272:-48311 | None:intergenic |
AGATGGAAGAGTAAGGACAT+TGG | 0.600676 | tig0023272:-48949 | None:intergenic |
CGTTTGAGTATATAATGAGA+TGG | 0.602082 | tig0023272:-48966 | None:intergenic |
CGCAGGTAATGCGAAAGGAG+GGG | 0.602168 | tig0023272:+49186 | Msa1407150:CDS |
AACTCCCATCAGCAATGGGA+AGG | 0.604290 | tig0023272:+49211 | Msa1407150:CDS |
AAACAGAGAGCAAGTTAGAC+CGG | 0.606350 | tig0023272:-53288 | None:intergenic |
CAACCCTTGTGACTGTTCGT+GGG | 0.608141 | tig0023272:-47516 | None:intergenic |
TGCGCAGGTAATGCGAAAGG+AGG | 0.609788 | tig0023272:+49184 | Msa1407150:CDS |
TTGCCTCTCCATCGGAGATG+GGG | 0.612305 | tig0023272:-48676 | None:intergenic |
CAGATCCAGAAATTTGCCGG+TGG | 0.612578 | tig0023272:-47660 | None:intergenic |
TGTGGTTTGGATGGAGAACG+AGG | 0.614308 | tig0023272:+47114 | Msa1407150:exon |
TTTAGACAGATATGATCTCA+GGG | 0.617719 | tig0023272:+48401 | Msa1407150:CDS |
AACGCCCACGAACAGTCACA+AGG | 0.617810 | tig0023272:+47512 | Msa1407150:CDS |
AATCATGCTAATTACACTAG+TGG | 0.620695 | tig0023272:+49260 | Msa1407150:CDS |
CTCAACTTTATAAAGGATGG+GGG | 0.621549 | tig0023272:-53551 | None:intergenic |
ATCCAAAGCTGAGGATGATG+GGG | 0.622295 | tig0023272:+48773 | Msa1407150:CDS |
AGATCCAGAAATTTGCCGGT+GGG | 0.622920 | tig0023272:-47659 | None:intergenic |
TATGGAATTCGAGTCTGAAG+AGG | 0.624053 | tig0023272:+47321 | Msa1407150:CDS |
CTTGGGAGAGCATATGAATG+AGG | 0.624492 | tig0023272:+49298 | Msa1407150:CDS |
CAAATTTAAAGGCTTCATGT+CGG | 0.625446 | tig0023272:-49088 | None:intergenic |
CAGCAAGGTTGGCTTTACTG+AGG | 0.625913 | tig0023272:+47768 | Msa1407150:CDS |
CAGTGGTTATGGAGAGTGGG+GGG | 0.627461 | tig0023272:-48176 | None:intergenic |
TGTGTTGAAAAGCCAGACAA+AGG | 0.628839 | tig0023272:-48130 | None:intergenic |
TCGAATTCCATACCCTCAGA+AGG | 0.628976 | tig0023272:-47310 | None:intergenic |
GGACCCCATCTCCGATGGAG+AGG | 0.629360 | tig0023272:+48673 | Msa1407150:CDS |
ATTAAGATAAGCATGAAAGA+CGG | 0.631649 | tig0023272:+53361 | Msa1407150:CDS |
AGGCAGTGAACCTGATCGGG+TGG | 0.632274 | tig0023272:-47631 | None:intergenic |
AGGTACCCAGTGCCTGCAAG+CGG | 0.638903 | tig0023272:-48451 | None:intergenic |
TTTGGGAGGAGAATATGAGG+AGG | 0.639911 | tig0023272:+47156 | Msa1407150:CDS |
CAAAGCTGAGGATGATGGGG+AGG | 0.640907 | tig0023272:+48776 | Msa1407150:CDS |
GGGGTCAGCCCAGAAAACAT+TGG | 0.643984 | tig0023272:-47944 | None:intergenic |
ATGAATAATGAACTGAAGTG+AGG | 0.645021 | tig0023272:+47075 | Msa1407150:five_prime_UTR |
AGAAACGGTGACGAGTGTCT+GGG | 0.645500 | tig0023272:-48239 | None:intergenic |
GGAGATCTGGAACCTTCTGA+GGG | 0.646337 | tig0023272:+47298 | Msa1407150:CDS |
TGGGAATACTTGCATTATAG+CGG | 0.646366 | tig0023272:-48220 | None:intergenic |
GCATATTGAGATGATGGACG+AGG | 0.650585 | tig0023272:+47186 | Msa1407150:CDS |
TGAAACTTATGATGTTGCAA+AGG | 0.650987 | tig0023272:+49133 | Msa1407150:CDS |
AGCATGAAAGACGGCCTCTG+AGG | 0.655501 | tig0023272:+53370 | Msa1407150:CDS |
TTGATTGTAGGAATTACATG+AGG | 0.657971 | tig0023272:+47791 | Msa1407150:CDS |
AGTTGCGCAGGTAATGCGAA+AGG | 0.657991 | tig0023272:+49181 | Msa1407150:CDS |
AATGACAGAATCGTGATCAG+TGG | 0.660094 | tig0023272:-48193 | None:intergenic |
TCATGTAGCTAAATTTGGAG+AGG | 0.661413 | tig0023272:+48809 | Msa1407150:CDS |
TCAGTGGTTATGGAGAGTGG+GGG | 0.663708 | tig0023272:-48177 | None:intergenic |
ATTCATGGCATCCAAAGCTG+AGG | 0.668434 | tig0023272:+48764 | Msa1407150:CDS |
GAAGCCAGATACGATCCACT+TGG | 0.669193 | tig0023272:-47581 | None:intergenic |
TCGTCCATCATCTCAATATG+CGG | 0.670750 | tig0023272:-47184 | None:intergenic |
TCAAGGTGATCTTGATGACG+AGG | 0.673752 | tig0023272:+47909 | Msa1407150:CDS |
AGAGTATGGTGGTATCAGCA+AGG | 0.675333 | tig0023272:+47753 | Msa1407150:CDS |
TCCATCATCTCAATATGCGG+CGG | 0.677985 | tig0023272:-47181 | None:intergenic |
GTAATCGATACCTGTTAGAG+CGG | 0.683465 | tig0023272:-48023 | None:intergenic |
GCACTCATCAAAGAGTATGG+TGG | 0.683994 | tig0023272:+47742 | Msa1407150:CDS |
CAATGAGAAAGAAGTAAGAG+CGG | 0.684122 | tig0023272:+48617 | Msa1407150:CDS |
GATGATTTGGGAGAAAGCAG+CGG | 0.686560 | tig0023272:+47247 | Msa1407150:CDS |
TGTAATTCAACCTTGCCTTG+GGG | 0.693919 | tig0023272:-47963 | None:intergenic |
ACGCCCACGAACAGTCACAA+GGG | 0.715179 | tig0023272:+47513 | Msa1407150:CDS |
ACTCCCACAATCCTCCTCAG+AGG | 0.731695 | tig0023272:-53384 | None:intergenic |
GGTTTGGATGGAGAACGAGG+TGG | 0.749123 | tig0023272:+47117 | Msa1407150:exon |
TCTGAATGATAGCTCCGTCG+CGG | 0.754566 | tig0023272:-47420 | None:intergenic |
AGTGCAGACATAATTCTGCG+AGG | 0.756220 | tig0023272:-47724 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATATTTTATTTACATCAAT+TGG | + | tig0023272:50149-50168 | Msa1407150:intron | 10.0% |
!! | TTAGAAGAAAAAAAAAAATA+GGG | - | tig0023272:51673-51692 | None:intergenic | 10.0% |
!! | ATTAGAAGAAAAAAAAAAAT+AGG | - | tig0023272:51674-51693 | None:intergenic | 10.0% |
!!! | ATTACTTTTAAATGATATTT+TGG | - | tig0023272:51776-51795 | None:intergenic | 10.0% |
!! | TATGATGATTATATATTAGT+AGG | - | tig0023272:49822-49841 | None:intergenic | 15.0% |
!!! | ATTTTATTTGTACATATTCA+GGG | + | tig0023272:50028-50047 | Msa1407150:intron | 15.0% |
!! | ATTGTATCAAAATCAATATT+TGG | - | tig0023272:50115-50134 | None:intergenic | 15.0% |
!! | AAACCATATAATTCTAATTT+GGG | - | tig0023272:50877-50896 | None:intergenic | 15.0% |
!! | AAAACCATATAATTCTAATT+TGG | - | tig0023272:50878-50897 | None:intergenic | 15.0% |
!!! | ATATGGTTTTGAATTAATTA+AGG | + | tig0023272:50888-50907 | Msa1407150:intron | 15.0% |
!!! | ACATTTTGTGTTTTAATATT+GGG | + | tig0023272:51037-51056 | Msa1407150:intron | 15.0% |
!!! | TATACCAATAAAACTATTTT+GGG | - | tig0023272:52506-52525 | None:intergenic | 15.0% |
!!! | ATATACCAATAAAACTATTT+TGG | - | tig0023272:52507-52526 | None:intergenic | 15.0% |
!!! | GTTTTTTTTTTTTGTTACAA+CGG | + | tig0023272:52604-52623 | Msa1407150:intron | 15.0% |
!! | ATAGCTTATTATATTTAACT+AGG | + | tig0023272:52706-52725 | Msa1407150:intron | 15.0% |
!! | AATGTTGAATAATAATGATA+TGG | + | tig0023272:52967-52986 | Msa1407150:intron | 15.0% |
!!! | TTTTGTCTAATAGATTATAT+CGG | + | tig0023272:53112-53131 | Msa1407150:intron | 15.0% |
!!! | AAAGAAGAAATTAGGATTTT+GGG | - | tig0023272:47884-47903 | None:intergenic | 20.0% |
!! | TCATGTATATACTTACTATT+TGG | + | tig0023272:49037-49056 | Msa1407150:CDS | 20.0% |
!! | ACCTTTATCAACAAATTTAA+AGG | - | tig0023272:49102-49121 | None:intergenic | 20.0% |
!!! | CATTTTATTTGTACATATTC+AGG | + | tig0023272:50027-50046 | Msa1407150:intron | 20.0% |
!!! | TTTTATTTGTACATATTCAG+GGG | + | tig0023272:50029-50048 | Msa1407150:intron | 20.0% |
!! | TAAGGAATTTATCTTTCAAA+AGG | - | tig0023272:50351-50370 | None:intergenic | 20.0% |
!!! | TTAGTTTTCTTTTTTCTCTT+AGG | + | tig0023272:50793-50812 | Msa1407150:intron | 20.0% |
!!! | CACATTTTGTGTTTTAATAT+TGG | + | tig0023272:51036-51055 | Msa1407150:intron | 20.0% |
!!! | AATGTTGTTAATGATGTTTT+TGG | - | tig0023272:51408-51427 | None:intergenic | 20.0% |
!! | TAAGAAAATAAATCAGATTG+AGG | - | tig0023272:51581-51600 | None:intergenic | 20.0% |
!!! | AATCTGATTTATTTTCTTAC+TGG | + | tig0023272:51582-51601 | Msa1407150:intron | 20.0% |
!!! | ATCTGATTTATTTTCTTACT+GGG | + | tig0023272:51583-51602 | Msa1407150:intron | 20.0% |
!! | AAGTAATGTGAACTAATATT+TGG | + | tig0023272:51789-51808 | Msa1407150:intron | 20.0% |
!! | TTAATTTAATACCCATTGAT+TGG | + | tig0023272:51988-52007 | Msa1407150:intron | 20.0% |
!!! | ACGTTTTAAAAAAATTCACT+AGG | - | tig0023272:52422-52441 | None:intergenic | 20.0% |
!! | AAAAATGTTGAGTATTTGAA+CGG | + | tig0023272:52574-52593 | Msa1407150:intron | 20.0% |
!! | TACAAAAACTAAACAAAATG+GGG | - | tig0023272:53492-53511 | None:intergenic | 20.0% |
!! | CTACAAAAACTAAACAAAAT+GGG | - | tig0023272:53493-53512 | None:intergenic | 20.0% |
!! | TCTACAAAAACTAAACAAAA+TGG | - | tig0023272:53494-53513 | None:intergenic | 20.0% |
!! | AGATTATCTCAACTTTATAA+AGG | - | tig0023272:53561-53580 | None:intergenic | 20.0% |
!!! | GTAGAATTTGATATTGGTTT+GGG | + | tig0023272:47139-47158 | Msa1407150:CDS | 25.0% |
!! | CAAAGAAGAAATTAGGATTT+TGG | - | tig0023272:47885-47904 | None:intergenic | 25.0% |
!!! | AGGTTGAATTACACTTTTTT+CGG | + | tig0023272:47973-47992 | Msa1407150:CDS | 25.0% |
!! | CTTAAAGAACTGATTTAAAC+TGG | - | tig0023272:48571-48590 | None:intergenic | 25.0% |
!! | AATTTTTCTTGTGTAAAGCT+CGG | - | tig0023272:48706-48725 | None:intergenic | 25.0% |
! | ACATATCATGTAGCTAAATT+TGG | + | tig0023272:48804-48823 | Msa1407150:CDS | 25.0% |
!!! | GCCTTTAAATTTGTTGATAA+AGG | + | tig0023272:49098-49117 | Msa1407150:CDS | 25.0% |
!!! | TCATCTTTTAAGAACCAAAT+TGG | + | tig0023272:50262-50281 | Msa1407150:intron | 25.0% |
!! | TTTCATTGATTGAACAAAGT+TGG | + | tig0023272:50325-50344 | Msa1407150:intron | 25.0% |
! | TCACCCAAATTAGAATTATA+TGG | + | tig0023272:50871-50890 | Msa1407150:intron | 25.0% |
!! | TATTTTTCTTTATGCCCTAA+GGG | - | tig0023272:50956-50975 | None:intergenic | 25.0% |
!! | ATATTTTTCTTTATGCCCTA+AGG | - | tig0023272:50957-50976 | None:intergenic | 25.0% |
! | AGAATATTATGATAGATGAG+TGG | - | tig0023272:51731-51750 | None:intergenic | 25.0% |
!! | CATTTTACAAATGTATGCTT+CGG | - | tig0023272:51839-51858 | None:intergenic | 25.0% |
! | TGGAAAGAATAACTCTATAA+AGG | - | tig0023272:51940-51959 | None:intergenic | 25.0% |
!! | AAATTAGGGTTAGTGTAAAT+TGG | + | tig0023272:52306-52325 | Msa1407150:intron | 25.0% |
!! | AATTAGGGTTAGTGTAAATT+GGG | + | tig0023272:52307-52326 | Msa1407150:intron | 25.0% |
!!! | TACTCCCAAAATAGTTTTAT+TGG | + | tig0023272:52499-52518 | Msa1407150:intron | 25.0% |
! | TAATAATGATATGGAAAGAG+AGG | + | tig0023272:52976-52995 | Msa1407150:intron | 25.0% |
! | AATAATGATATGGAAAGAGA+GGG | + | tig0023272:52977-52996 | Msa1407150:intron | 25.0% |
! | CTTAATATCTAATATCTTGC+AGG | + | tig0023272:53195-53214 | Msa1407150:intron | 25.0% |
! | ATTAAGATAAGCATGAAAGA+CGG | + | tig0023272:53361-53380 | Msa1407150:CDS | 25.0% |
! | ATCTCAACTTTATAAAGGAT+GGG | - | tig0023272:53556-53575 | None:intergenic | 25.0% |
! | TATCTCAACTTTATAAAGGA+TGG | - | tig0023272:53557-53576 | None:intergenic | 25.0% |
ATGAATAATGAACTGAAGTG+AGG | + | tig0023272:47075-47094 | Msa1407150:five_prime_UTR | 30.0% | |
GGTATTTGTTTGTTTGTTTG+TGG | + | tig0023272:47096-47115 | Msa1407150:five_prime_UTR | 30.0% | |
TTGTTTGTTTGTTTGTGGTT+TGG | + | tig0023272:47101-47120 | Msa1407150:five_prime_UTR | 30.0% | |
! | GGTAGAATTTGATATTGGTT+TGG | + | tig0023272:47138-47157 | Msa1407150:CDS | 30.0% |
AGAAGAAGAAGATGATGATT+TGG | + | tig0023272:47234-47253 | Msa1407150:CDS | 30.0% | |
GAAGAAGAAGATGATGATTT+GGG | + | tig0023272:47235-47254 | Msa1407150:CDS | 30.0% | |
TTGATTGTAGGAATTACATG+AGG | + | tig0023272:47791-47810 | Msa1407150:CDS | 30.0% | |
AATCGCCATAAAAGTTTACA+AGG | + | tig0023272:47817-47836 | Msa1407150:CDS | 30.0% | |
TGAACAGCAAAGAAGAAATT+AGG | - | tig0023272:47892-47911 | None:intergenic | 30.0% | |
!! | AATTTCTTCTTTGCTGTTCA+AGG | + | tig0023272:47892-47911 | Msa1407150:CDS | 30.0% |
GTTAACACATTTGTGAAACT+CGG | - | tig0023272:48337-48356 | None:intergenic | 30.0% | |
ATCATATCTGTCTAAAAGTG+TGG | - | tig0023272:48397-48416 | None:intergenic | 30.0% | |
! | TTTTAGACAGATATGATCTC+AGG | + | tig0023272:48400-48419 | Msa1407150:CDS | 30.0% |
TTTAGACAGATATGATCTCA+GGG | + | tig0023272:48401-48420 | Msa1407150:CDS | 30.0% | |
TATAATGAGATGGAAGAGTA+AGG | - | tig0023272:48959-48978 | None:intergenic | 30.0% | |
CGTTTGAGTATATAATGAGA+TGG | - | tig0023272:48969-48988 | None:intergenic | 30.0% | |
CAAATTTAAAGGCTTCATGT+CGG | - | tig0023272:49091-49110 | None:intergenic | 30.0% | |
TTGCAACATCATAAGTTTCA+GGG | - | tig0023272:49133-49152 | None:intergenic | 30.0% | |
TTTGCAACATCATAAGTTTC+AGG | - | tig0023272:49134-49153 | None:intergenic | 30.0% | |
TGAAACTTATGATGTTGCAA+AGG | + | tig0023272:49133-49152 | Msa1407150:CDS | 30.0% | |
AATCATGCTAATTACACTAG+TGG | + | tig0023272:49260-49279 | Msa1407150:CDS | 30.0% | |
GGTTAAAAACAACCGTAAAA+TGG | - | tig0023272:49332-49351 | None:intergenic | 30.0% | |
TATATCTCTATTCTCTAGCA+TGG | - | tig0023272:49409-49428 | None:intergenic | 30.0% | |
CAACTTTATTGGAAGAATGA+TGG | - | tig0023272:49550-49569 | None:intergenic | 30.0% | |
GCACTGAAATTCAACTTTAT+TGG | - | tig0023272:49561-49580 | None:intergenic | 30.0% | |
CAACAAAAATGAAGGTCAAA+GGG | - | tig0023272:49764-49783 | None:intergenic | 30.0% | |
TCAACAAAAATGAAGGTCAA+AGG | - | tig0023272:49765-49784 | None:intergenic | 30.0% | |
ATAGCACTCAACAAAAATGA+AGG | - | tig0023272:49772-49791 | None:intergenic | 30.0% | |
TAAAACCATAGACATGTAGA+AGG | - | tig0023272:49856-49875 | None:intergenic | 30.0% | |
ACAAGACTCATAACTCAAAA+TGG | - | tig0023272:49896-49915 | None:intergenic | 30.0% | |
GATCGAACTTATCATCAATT+AGG | + | tig0023272:50215-50234 | Msa1407150:intron | 30.0% | |
TCAGTTAGAACCTTAATGTT+TGG | + | tig0023272:50562-50581 | Msa1407150:intron | 30.0% | |
CAGTTAGAACCTTAATGTTT+GGG | + | tig0023272:50563-50582 | Msa1407150:intron | 30.0% | |
! | TTTTATGTTCTCCGTTAACT+CGG | + | tig0023272:50678-50697 | Msa1407150:intron | 30.0% |
ACATCAAAATGTGAAGTTCT+TGG | - | tig0023272:50724-50743 | None:intergenic | 30.0% | |
! | ATTTGCAATGTTTTTCCCTT+AGG | + | tig0023272:50938-50957 | Msa1407150:intron | 30.0% |
! | TTTGCAATGTTTTTCCCTTA+GGG | + | tig0023272:50939-50958 | Msa1407150:intron | 30.0% |
! | AGCACAAATGCACAAAATTT+TGG | + | tig0023272:51152-51171 | Msa1407150:intron | 30.0% |
! | ACAAATGCACAAAATTTTGG+TGG | + | tig0023272:51155-51174 | Msa1407150:intron | 30.0% |
TGATATGGAGACAAGAAAAA+GGG | + | tig0023272:51191-51210 | Msa1407150:intron | 30.0% | |
ATACTTCAGTGACTTAGAAA+TGG | - | tig0023272:51352-51371 | None:intergenic | 30.0% | |
!!! | ATTTGACACTGCTGTTTTTT+GGG | - | tig0023272:51377-51396 | None:intergenic | 30.0% |
CCAAACTATTAAAAGAGGTT+TGG | - | tig0023272:51536-51555 | None:intergenic | 30.0% | |
! | CCAAACCTCTTTTAATAGTT+TGG | + | tig0023272:51533-51552 | Msa1407150:intron | 30.0% |
TCAAGCCAAACTATTAAAAG+AGG | - | tig0023272:51541-51560 | None:intergenic | 30.0% | |
!!! | GTTTGGCTTGAAGTTTTATT+TGG | + | tig0023272:51550-51569 | Msa1407150:intron | 30.0% |
! | GTTCTACATTCTTTTCTACT+AGG | + | tig0023272:51641-51660 | Msa1407150:intron | 30.0% |
TCAGACAATATCCAATCAAT+GGG | - | tig0023272:52002-52021 | None:intergenic | 30.0% | |
ACATAGTAACATAATTCGCT+GGG | + | tig0023272:52023-52042 | Msa1407150:intron | 30.0% | |
ATGAGGAAGATGATGAAATT+AGG | + | tig0023272:52291-52310 | Msa1407150:intron | 30.0% | |
TGAGGAAGATGATGAAATTA+GGG | + | tig0023272:52292-52311 | Msa1407150:intron | 30.0% | |
ATGTTTAGCAATTCAGCATT+GGG | - | tig0023272:52383-52402 | None:intergenic | 30.0% | |
TATGTTTAGCAATTCAGCAT+TGG | - | tig0023272:52384-52403 | None:intergenic | 30.0% | |
AATCGTGAATTATGTGACTA+TGG | + | tig0023272:52833-52852 | Msa1407150:intron | 30.0% | |
!!! | ATATTTGTGAAAGCGCTTTT+TGG | - | tig0023272:52918-52937 | None:intergenic | 30.0% |
! | ATTTTGTTCTTACGTGCATT+TGG | + | tig0023272:52938-52957 | Msa1407150:intron | 30.0% |
TAATATCTTGCAGGATGATA+TGG | + | tig0023272:53204-53223 | Msa1407150:intron | 30.0% | |
TAAGCATATCACGAAACTTA+CGG | + | tig0023272:53228-53247 | Msa1407150:CDS | 30.0% | |
ATAGGAAATGTGAAATGTAC+CGG | + | tig0023272:53269-53288 | Msa1407150:CDS | 30.0% | |
AACAAAATGGGGTTATTCAT+AGG | - | tig0023272:53481-53500 | None:intergenic | 30.0% | |
TCTCAACTTTATAAAGGATG+GGG | - | tig0023272:53555-53574 | None:intergenic | 30.0% | |
! | TTGTTTGTTTGTGGTTTGGA+TGG | + | tig0023272:47105-47124 | Msa1407150:exon | 35.0% |
GAGGTGGTAGAATTTGATAT+TGG | + | tig0023272:47133-47152 | Msa1407150:CDS | 35.0% | |
!! | GAATTTGATATTGGTTTGGG+AGG | + | tig0023272:47142-47161 | Msa1407150:CDS | 35.0% |
AATTCGTTTGTGCTAAGGAA+GGG | + | tig0023272:47446-47465 | Msa1407150:CDS | 35.0% | |
!! | GTGCATTTTGACAGATAAAG+AGG | - | tig0023272:47551-47570 | None:intergenic | 35.0% |
AACCCTAATTGACACTTTAC+AGG | + | tig0023272:47687-47706 | Msa1407150:CDS | 35.0% | |
! | AGCCTGTAAAGTGTCAATTA+GGG | - | tig0023272:47692-47711 | None:intergenic | 35.0% |
! | TGTCGCCTTGTAAACTTTTA+TGG | - | tig0023272:47825-47844 | None:intergenic | 35.0% |
TGATGGTTTACACCAGTAAA+GGG | - | tig0023272:48057-48076 | None:intergenic | 35.0% | |
ATGATGGTTTACACCAGTAA+AGG | - | tig0023272:48058-48077 | None:intergenic | 35.0% | |
TTTACTGGTGTAAACCATCA+TGG | + | tig0023272:48057-48076 | Msa1407150:CDS | 35.0% | |
TGGGAATACTTGCATTATAG+CGG | - | tig0023272:48223-48242 | None:intergenic | 35.0% | |
AATGTGTCTCGCAAATATAC+AGG | - | tig0023272:48474-48493 | None:intergenic | 35.0% | |
AGCATGAACTCTTACTTTGA+TGG | + | tig0023272:48528-48547 | Msa1407150:CDS | 35.0% | |
CAATGAGAAAGAAGTAAGAG+CGG | + | tig0023272:48617-48636 | Msa1407150:CDS | 35.0% | |
TGAATACTTTGCCAGTATTG+AGG | + | tig0023272:48652-48671 | Msa1407150:CDS | 35.0% | |
! | AATTTTCACTCGATTCCAAG+AGG | + | tig0023272:48722-48741 | Msa1407150:CDS | 35.0% |
TCATGTAGCTAAATTTGGAG+AGG | + | tig0023272:48809-48828 | Msa1407150:CDS | 35.0% | |
!! | TGCCAAATGTTTGAGTTTTC+AGG | + | tig0023272:48888-48907 | Msa1407150:CDS | 35.0% |
CTCATTATATACTCAAACGC+TGG | + | tig0023272:48970-48989 | Msa1407150:CDS | 35.0% | |
TGCAACATCATAAGTTTCAG+GGG | - | tig0023272:49132-49151 | None:intergenic | 35.0% | |
! | GAGGTCAGAATTCCATTTTA+CGG | + | tig0023272:49317-49336 | Msa1407150:intron | 35.0% |
! | GTTTTTAACCTGTTCTACGA+TGG | + | tig0023272:49342-49361 | Msa1407150:intron | 35.0% |
AATCTTCACCAAATAGCTTG+CGG | + | tig0023272:49441-49460 | Msa1407150:intron | 35.0% | |
TTAGAGCCTCTATGATAAAG+TGG | + | tig0023272:49493-49512 | Msa1407150:intron | 35.0% | |
TGCTAACCACTTTATCATAG+AGG | - | tig0023272:49502-49521 | None:intergenic | 35.0% | |
CTTTATTGGAAGAATGATGG+TGG | - | tig0023272:49547-49566 | None:intergenic | 35.0% | |
AAGTTGAATTTCAGTGCACA+AGG | + | tig0023272:49564-49583 | Msa1407150:intron | 35.0% | |
TACTTTCAGTTGTACAGCTT+AGG | + | tig0023272:49671-49690 | Msa1407150:intron | 35.0% | |
CTTACCTTGAGAGCTAAAAA+GGG | - | tig0023272:49712-49731 | None:intergenic | 35.0% | |
GACTCATAACTCAAAATGGT+TGG | - | tig0023272:49892-49911 | None:intergenic | 35.0% | |
GTGTTGAATGAGTGTTTCAT+AGG | - | tig0023272:49959-49978 | None:intergenic | 35.0% | |
! | GAGTAACTAGCTTCTCAATT+GGG | - | tig0023272:50008-50027 | None:intergenic | 35.0% |
! | TGAGTAACTAGCTTCTCAAT+TGG | - | tig0023272:50009-50028 | None:intergenic | 35.0% |
GCTTGAAGTACACATCAATT+TGG | + | tig0023272:50171-50190 | Msa1407150:intron | 35.0% | |
ATGATAAGTTCGATCTTCAG+AGG | - | tig0023272:50210-50229 | None:intergenic | 35.0% | |
TTCCTTATCCATTATCCCTT+AGG | + | tig0023272:50364-50383 | Msa1407150:intron | 35.0% | |
AAGTTCGTTAGAGGGAAAAA+TGG | + | tig0023272:50444-50463 | Msa1407150:intron | 35.0% | |
AGTTCGTTAGAGGGAAAAAT+GGG | + | tig0023272:50445-50464 | Msa1407150:intron | 35.0% | |
AGAAAATGTGCAATTCCAGA+TGG | + | tig0023272:50520-50539 | Msa1407150:intron | 35.0% | |
! | TGATCTAAGATAACTCCATC+TGG | - | tig0023272:50538-50557 | None:intergenic | 35.0% |
TTCTCTGTACCCAAACATTA+AGG | - | tig0023272:50575-50594 | None:intergenic | 35.0% | |
AAATGTGAAGTTCTTGGTCA+GGG | - | tig0023272:50718-50737 | None:intergenic | 35.0% | |
AAAATGTGAAGTTCTTGGTC+AGG | - | tig0023272:50719-50738 | None:intergenic | 35.0% | |
ATTAAGGATGCATACTGTGT+TGG | + | tig0023272:50904-50923 | Msa1407150:intron | 35.0% | |
TTAAGGATGCATACTGTGTT+GGG | + | tig0023272:50905-50924 | Msa1407150:intron | 35.0% | |
!! | ACTGAATTGACTTGTAGATG+TGG | + | tig0023272:51079-51098 | Msa1407150:intron | 35.0% |
! | ATGTGGTATGTTGTGGATTT+TGG | + | tig0023272:51096-51115 | Msa1407150:intron | 35.0% |
GTGATATGGAGACAAGAAAA+AGG | + | tig0023272:51190-51209 | Msa1407150:intron | 35.0% | |
!!! | CATTTGACACTGCTGTTTTT+TGG | - | tig0023272:51378-51397 | None:intergenic | 35.0% |
GTGGTTATGCAAGACAATAT+AGG | - | tig0023272:51712-51731 | None:intergenic | 35.0% | |
! | TTTTCTTGCTTTACTGAAGC+TGG | + | tig0023272:51885-51904 | Msa1407150:intron | 35.0% |
! | TAAGCACATCATGATGATGA+TGG | - | tig0023272:51960-51979 | None:intergenic | 35.0% |
GTCAGACAATATCCAATCAA+TGG | - | tig0023272:52003-52022 | None:intergenic | 35.0% | |
CACATAGTAACATAATTCGC+TGG | + | tig0023272:52022-52041 | Msa1407150:intron | 35.0% | |
GAAGAAACAGAAACTGGATT+TGG | + | tig0023272:52250-52269 | Msa1407150:intron | 35.0% | |
TAGTGTAAATTGGGCTTATC+TGG | + | tig0023272:52316-52335 | Msa1407150:intron | 35.0% | |
AGTGTAAATTGGGCTTATCT+GGG | + | tig0023272:52317-52336 | Msa1407150:intron | 35.0% | |
GACACGCAGAATATATTAGA+AGG | - | tig0023272:53008-53027 | None:intergenic | 35.0% | |
! | AGAAATGAGAGAAAGCACAT+GGG | - | tig0023272:53066-53085 | None:intergenic | 35.0% |
! | AAGAAATGAGAGAAAGCACA+TGG | - | tig0023272:53067-53086 | None:intergenic | 35.0% |
CAAGTTAGAGTTGTCAGTAA+AGG | + | tig0023272:53330-53349 | Msa1407150:CDS | 35.0% | |
CTCAACTTTATAAAGGATGG+GGG | - | tig0023272:53554-53573 | None:intergenic | 35.0% | |
TCGTCCATCATCTCAATATG+CGG | - | tig0023272:47187-47206 | None:intergenic | 40.0% | |
TATGGAATTCGAGTCTGAAG+AGG | + | tig0023272:47321-47340 | Msa1407150:CDS | 40.0% | |
GAGACAATTCGTTTGTGCTA+AGG | + | tig0023272:47441-47460 | Msa1407150:CDS | 40.0% | |
CAATTCGTTTGTGCTAAGGA+AGG | + | tig0023272:47445-47464 | Msa1407150:CDS | 40.0% | |
TTGCAGATCCAGAAATTTGC+CGG | - | tig0023272:47666-47685 | None:intergenic | 40.0% | |
! | CAGCCTGTAAAGTGTCAATT+AGG | - | tig0023272:47693-47712 | None:intergenic | 40.0% |
TCTGCACTCATCAAAGAGTA+TGG | + | tig0023272:47739-47758 | Msa1407150:CDS | 40.0% | |
! | GCTTTACTGAGGTTGATTGT+AGG | + | tig0023272:47779-47798 | Msa1407150:CDS | 40.0% |
! | ATCCCATCACCAATGTTTTC+TGG | + | tig0023272:47935-47954 | Msa1407150:CDS | 40.0% |
! | TCCCATCACCAATGTTTTCT+GGG | + | tig0023272:47936-47955 | Msa1407150:CDS | 40.0% |
TGTAATTCAACCTTGCCTTG+GGG | - | tig0023272:47966-47985 | None:intergenic | 40.0% | |
GTGTAATTCAACCTTGCCTT+GGG | - | tig0023272:47967-47986 | None:intergenic | 40.0% | |
AGTGTAATTCAACCTTGCCT+TGG | - | tig0023272:47968-47987 | None:intergenic | 40.0% | |
GTAATCGATACCTGTTAGAG+CGG | - | tig0023272:48026-48045 | None:intergenic | 40.0% | |
AAAGCACAACCAAAGAGAAC+AGG | - | tig0023272:48087-48106 | None:intergenic | 40.0% | |
AAACTGAAGCTTCCTTTGTC+TGG | + | tig0023272:48118-48137 | Msa1407150:CDS | 40.0% | |
TGTGTTGAAAAGCCAGACAA+AGG | - | tig0023272:48133-48152 | None:intergenic | 40.0% | |
!!! | TTGTCTGGCTTTTCAACACA+TGG | + | tig0023272:48133-48152 | Msa1407150:CDS | 40.0% |
AGAATCGTGATCAGTGGTTA+TGG | - | tig0023272:48190-48209 | None:intergenic | 40.0% | |
AATGACAGAATCGTGATCAG+TGG | - | tig0023272:48196-48215 | None:intergenic | 40.0% | |
! | AGATATGCCACTTGCAGAAA+CGG | - | tig0023272:48257-48276 | None:intergenic | 40.0% |
GCATATCTTTAAGCAATGCC+AGG | + | tig0023272:48269-48288 | Msa1407150:CDS | 40.0% | |
AAATGTGAGACAACTTCTCC+TGG | - | tig0023272:48290-48309 | None:intergenic | 40.0% | |
GAAACTCGGCTTCAAAGTTT+GGG | - | tig0023272:48323-48342 | None:intergenic | 40.0% | |
TGAAACTCGGCTTCAAAGTT+TGG | - | tig0023272:48324-48343 | None:intergenic | 40.0% | |
TTGACGAATTTGAGTCTTGC+TGG | + | tig0023272:48370-48389 | Msa1407150:CDS | 40.0% | |
ATGATCTCAGGGACAATGAA+TGG | + | tig0023272:48412-48431 | Msa1407150:CDS | 40.0% | |
GGCCTGAAAACTCAAACATT+TGG | - | tig0023272:48893-48912 | None:intergenic | 40.0% | |
CCAGAATATGTCTGCAAAGA+AGG | - | tig0023272:48914-48933 | None:intergenic | 40.0% | |
CCTTCTTTGCAGACATATTC+TGG | + | tig0023272:48911-48930 | Msa1407150:CDS | 40.0% | |
AGATGGAAGAGTAAGGACAT+TGG | - | tig0023272:48952-48971 | None:intergenic | 40.0% | |
!! | TTGCAAACTGACGTTGCTTT+TGG | - | tig0023272:49006-49025 | None:intergenic | 40.0% |
TAATTACACTAGTGGCTGTC+AGG | + | tig0023272:49268-49287 | Msa1407150:CDS | 40.0% | |
ATAACATGCCATCGTAGAAC+AGG | - | tig0023272:49353-49372 | None:intergenic | 40.0% | |
!! | TTCTCTAGCATGGTGGATTA+AGG | - | tig0023272:49399-49418 | None:intergenic | 40.0% |
ATCTCTATTCTCTAGCATGG+TGG | - | tig0023272:49406-49425 | None:intergenic | 40.0% | |
!!! | GGTAGTTTTGACTTGTGTGT+TGG | + | tig0023272:49585-49604 | Msa1407150:intron | 40.0% |
AAACCTTTGGACTTGATGTG+TGG | - | tig0023272:49611-49630 | None:intergenic | 40.0% | |
! | CATCAAGTCCAAAGGTTTTG+TGG | + | tig0023272:49613-49632 | Msa1407150:intron | 40.0% |
!! | TCCAAAGGTTTTGTGGATGA+GGG | + | tig0023272:49620-49639 | Msa1407150:intron | 40.0% |
CCTTACCTTGAGAGCTAAAA+AGG | - | tig0023272:49713-49732 | None:intergenic | 40.0% | |
!!! | CCTTTTTAGCTCTCAAGGTA+AGG | + | tig0023272:49710-49729 | Msa1407150:intron | 40.0% |
TGTGTCCTTCTACATGTCTA+TGG | + | tig0023272:49848-49867 | Msa1407150:intron | 40.0% | |
ATCTCAGTGCACTACCAATT+TGG | - | tig0023272:50279-50298 | None:intergenic | 40.0% | |
!! | GACCTAAGGGATAATGGATA+AGG | - | tig0023272:50369-50388 | None:intergenic | 40.0% |
CCATTGGGCTATTCTCTTTA+TGG | - | tig0023272:50405-50424 | None:intergenic | 40.0% | |
CCATAAAGAGAATAGCCCAA+TGG | + | tig0023272:50402-50421 | Msa1407150:intron | 40.0% | |
AATAGCCCAATGGATAGTAG+AGG | + | tig0023272:50412-50431 | Msa1407150:intron | 40.0% | |
ACTCACCTCTACTATCCATT+GGG | - | tig0023272:50420-50439 | None:intergenic | 40.0% | |
AACTCACCTCTACTATCCAT+TGG | - | tig0023272:50421-50440 | None:intergenic | 40.0% | |
AATGGATAGTAGAGGTGAGT+TGG | + | tig0023272:50420-50439 | Msa1407150:intron | 40.0% | |
GGAAAAATGGGAAACACATG+TGG | + | tig0023272:50457-50476 | Msa1407150:intron | 40.0% | |
AGTGATAGGAACCGAGTTAA+CGG | - | tig0023272:50692-50711 | None:intergenic | 40.0% | |
AATGTGAAGTTCTTGGTCAG+GGG | - | tig0023272:50717-50736 | None:intergenic | 40.0% | |
CTTGTAGATGTGGTATGTTG+TGG | + | tig0023272:51089-51108 | Msa1407150:intron | 40.0% | |
GGCAACAATTCAGTGTGATA+TGG | + | tig0023272:51176-51195 | Msa1407150:intron | 40.0% | |
CAAGAAAAAGGGTTCCACTT+TGG | + | tig0023272:51202-51221 | Msa1407150:intron | 40.0% | |
!! | TTCCACTTTGGTGCCATTAA+TGG | + | tig0023272:51214-51233 | Msa1407150:intron | 40.0% |
!! | TGACTTAGAAATGGTGCCAT+TGG | - | tig0023272:51343-51362 | None:intergenic | 40.0% |
AGAATGTAGAACCTCGTCTT+TGG | - | tig0023272:51633-51652 | None:intergenic | 40.0% | |
CTCGTTTATACGGATACTCA+CGG | - | tig0023272:52149-52168 | None:intergenic | 40.0% | |
AGAAGAACATGAGAAGAGAG+TGG | + | tig0023272:52222-52241 | Msa1407150:intron | 40.0% | |
GAGAGTGAAGAAACAGAAAC+TGG | + | tig0023272:52244-52263 | Msa1407150:intron | 40.0% | |
AAACAGAAACTGGATTTGGC+TGG | + | tig0023272:52254-52273 | Msa1407150:intron | 40.0% | |
CACGCTACATCAGAAGAATT+CGG | - | tig0023272:52785-52804 | None:intergenic | 40.0% | |
ACATAATTCACGATTCGTCC+TGG | - | tig0023272:52828-52847 | None:intergenic | 40.0% | |
GACTATGGTCTGATAGTTGT+TGG | + | tig0023272:52848-52867 | Msa1407150:intron | 40.0% | |
TTCTTACGTGCATTTGGTTG+AGG | + | tig0023272:52944-52963 | Msa1407150:intron | 40.0% | |
! | GAAATGAGAGAAAGCACATG+GGG | - | tig0023272:53065-53084 | None:intergenic | 40.0% |
ATGAGCTTGAGTGTGCAAAT+AGG | + | tig0023272:53251-53270 | Msa1407150:CDS | 40.0% | |
AAACAGAGAGCAAGTTAGAC+CGG | - | tig0023272:53291-53310 | None:intergenic | 40.0% | |
!!! | CTCTGTTTTGAAAGCTGTTG+AGG | + | tig0023272:53303-53322 | Msa1407150:CDS | 40.0% |
GTTAGAGTTGTCAGTAAAGG+TGG | + | tig0023272:53333-53352 | Msa1407150:CDS | 40.0% | |
! | GGGAGTACATAGAAACAGAT+AGG | + | tig0023272:53401-53420 | Msa1407150:three_prime_UTR | 40.0% |
ACTTTATAAAGGATGGGGGT+GGG | - | tig0023272:53550-53569 | None:intergenic | 40.0% | |
AACTTTATAAAGGATGGGGG+TGG | - | tig0023272:53551-53570 | None:intergenic | 40.0% | |
! | TGGTTTGGGAGGAGAATATG+AGG | + | tig0023272:47153-47172 | Msa1407150:CDS | 45.0% |
TTTGGGAGGAGAATATGAGG+AGG | + | tig0023272:47156-47175 | Msa1407150:CDS | 45.0% | |
TCCATCATCTCAATATGCGG+CGG | - | tig0023272:47184-47203 | None:intergenic | 45.0% | |
!! | GCATATTGAGATGATGGACG+AGG | + | tig0023272:47186-47205 | Msa1407150:CDS | 45.0% |
! | GATGATTTGGGAGAAAGCAG+CGG | + | tig0023272:47247-47266 | Msa1407150:CDS | 45.0% |
TCGAATTCCATACCCTCAGA+AGG | - | tig0023272:47313-47332 | None:intergenic | 45.0% | |
AATTCCTATGCTCGTCGTGT+TGG | + | tig0023272:47361-47380 | Msa1407150:CDS | 45.0% | |
GCGTTTGATCTCTCTGTCTT+TGG | - | tig0023272:47497-47516 | None:intergenic | 45.0% | |
AGATCCAGAAATTTGCCGGT+GGG | - | tig0023272:47662-47681 | None:intergenic | 45.0% | |
ATTGACACTTTACAGGCTGC+TGG | + | tig0023272:47694-47713 | Msa1407150:CDS | 45.0% | |
ACTTTACAGGCTGCTGGTAT+GGG | + | tig0023272:47700-47719 | Msa1407150:CDS | 45.0% | |
AGTGCAGACATAATTCTGCG+AGG | - | tig0023272:47727-47746 | None:intergenic | 45.0% | |
! | GCACTCATCAAAGAGTATGG+TGG | + | tig0023272:47742-47761 | Msa1407150:CDS | 45.0% |
AGAGTATGGTGGTATCAGCA+AGG | + | tig0023272:47753-47772 | Msa1407150:CDS | 45.0% | |
TATGGTGGTATCAGCAAGGT+TGG | + | tig0023272:47757-47776 | Msa1407150:CDS | 45.0% | |
!! | TCAAGGTGATCTTGATGACG+AGG | + | tig0023272:47909-47928 | Msa1407150:CDS | 45.0% |
! | GCCCAGAAAACATTGGTGAT+GGG | - | tig0023272:47940-47959 | None:intergenic | 45.0% |
AGCCCAGAAAACATTGGTGA+TGG | - | tig0023272:47941-47960 | None:intergenic | 45.0% | |
ACACTACTTACCGCTCTAAC+AGG | + | tig0023272:48013-48032 | Msa1407150:CDS | 45.0% | |
TTACCCTTTGCTCCCTTTAC+TGG | + | tig0023272:48042-48061 | Msa1407150:CDS | 45.0% | |
ACACCAGTAAAGGGAGCAAA+GGG | - | tig0023272:48048-48067 | None:intergenic | 45.0% | |
TACACCAGTAAAGGGAGCAA+AGG | - | tig0023272:48049-48068 | None:intergenic | 45.0% | |
! | AGAGAACAGGTTGACCATGA+TGG | - | tig0023272:48074-48093 | None:intergenic | 45.0% |
CATGGTCAACCTGTTCTCTT+TGG | + | tig0023272:48075-48094 | Msa1407150:CDS | 45.0% | |
ATCAGTGGTTATGGAGAGTG+GGG | - | tig0023272:48181-48200 | None:intergenic | 45.0% | |
GATCAGTGGTTATGGAGAGT+GGG | - | tig0023272:48182-48201 | None:intergenic | 45.0% | |
TGATCAGTGGTTATGGAGAG+TGG | - | tig0023272:48183-48202 | None:intergenic | 45.0% | |
CTTCAAAGTTTGGGAACTGG+AGG | - | tig0023272:48314-48333 | None:intergenic | 45.0% | |
AAGCAATACATTCCGCTTGC+AGG | + | tig0023272:48439-48458 | Msa1407150:CDS | 45.0% | |
ATTCATGGCATCCAAAGCTG+AGG | + | tig0023272:48764-48783 | Msa1407150:CDS | 45.0% | |
CATCCAAAGCTGAGGATGAT+GGG | + | tig0023272:48772-48791 | Msa1407150:CDS | 45.0% | |
ATCCAAAGCTGAGGATGATG+GGG | + | tig0023272:48773-48792 | Msa1407150:CDS | 45.0% | |
CTAACCTTCCCATTGCTGAT+GGG | - | tig0023272:49218-49237 | None:intergenic | 45.0% | |
! | CTTGGGAGAGCATATGAATG+AGG | + | tig0023272:49298-49317 | Msa1407150:CDS | 45.0% |
! | ACCAAATAGCTTGCGGTCTT+AGG | + | tig0023272:49448-49467 | Msa1407150:intron | 45.0% |
TCCTAAGACCGCAAGCTATT+TGG | - | tig0023272:49452-49471 | None:intergenic | 45.0% | |
!! | GTCCAAAGGTTTTGTGGATG+AGG | + | tig0023272:49619-49638 | Msa1407150:intron | 45.0% |
TCCCTCATCCACAAAACCTT+TGG | - | tig0023272:49624-49643 | None:intergenic | 45.0% | |
!!! | CACACCCTTTTTAGCTCTCA+AGG | + | tig0023272:49705-49724 | Msa1407150:intron | 45.0% |
CAGAGAGACCTAAGGGATAA+TGG | - | tig0023272:50375-50394 | None:intergenic | 45.0% | |
ATCCCTTAGGTCTCTCTGAT+AGG | + | tig0023272:50377-50396 | Msa1407150:intron | 45.0% | |
TCCCTTAGGTCTCTCTGATA+GGG | + | tig0023272:50378-50397 | Msa1407150:intron | 45.0% | |
ACCCTATCAGAGAGACCTAA+GGG | - | tig0023272:50382-50401 | None:intergenic | 45.0% | |
! | TGAGTTGGCAAGTTCGTTAG+AGG | + | tig0023272:50435-50454 | Msa1407150:intron | 45.0% |
GAGTTGGCAAGTTCGTTAGA+GGG | + | tig0023272:50436-50455 | Msa1407150:intron | 45.0% | |
GGGTACAGAGAAATGTCTCT+AGG | + | tig0023272:50583-50602 | Msa1407150:intron | 45.0% | |
! | TCTCTAGGTGCTTTTGCTCT+GGG | + | tig0023272:50598-50617 | Msa1407150:intron | 45.0% |
!!! | TGCTTTTGCTCTGGGATTAC+AGG | + | tig0023272:50606-50625 | Msa1407150:intron | 45.0% |
!!! | GCTTTTGCTCTGGGATTACA+GGG | + | tig0023272:50607-50626 | Msa1407150:intron | 45.0% |
!!! | CTTTTGCTCTGGGATTACAG+GGG | + | tig0023272:50608-50627 | Msa1407150:intron | 45.0% |
TGCCATTAATGGCACCAAAG+TGG | - | tig0023272:51219-51238 | None:intergenic | 45.0% | |
!! | ATGGAATTGGATGGTGCCAT+TGG | - | tig0023272:51242-51261 | None:intergenic | 45.0% |
! | ATGCGTTTTCTTCCCAACGT+GGG | + | tig0023272:51440-51459 | Msa1407150:intron | 45.0% |
CTTGAAACTGATCCCACGTT+GGG | - | tig0023272:51455-51474 | None:intergenic | 45.0% | |
AAATTTCGCCACGAATTGGG+GGG | - | tig0023272:52111-52130 | None:intergenic | 45.0% | |
CAAATTTCGCCACGAATTGG+GGG | - | tig0023272:52112-52131 | None:intergenic | 45.0% | |
GCAAATTTCGCCACGAATTG+GGG | - | tig0023272:52113-52132 | None:intergenic | 45.0% | |
CGCAAATTTCGCCACGAATT+GGG | - | tig0023272:52114-52133 | None:intergenic | 45.0% | |
CCAATTCGTGGCGAAATTTG+CGG | + | tig0023272:52112-52131 | Msa1407150:intron | 45.0% | |
GTATCCGTATAAACGAGCGA+TGG | + | tig0023272:52152-52171 | Msa1407150:intron | 45.0% | |
CTCTCCATCGCTCGTTTATA+CGG | - | tig0023272:52159-52178 | None:intergenic | 45.0% | |
! | AAGGGAGAACTGTGAGTTGA+GGG | + | tig0023272:52181-52200 | Msa1407150:intron | 45.0% |
AAACTGGATTTGGCTGGTAG+CGG | + | tig0023272:52260-52279 | Msa1407150:intron | 45.0% | |
TATAGAGCTTCGGTACGCTT+CGG | - | tig0023272:52750-52769 | None:intergenic | 45.0% | |
AGAAGAATTCGGTACGCATG+GGG | - | tig0023272:52774-52793 | None:intergenic | 45.0% | |
CAGAAGAATTCGGTACGCAT+GGG | - | tig0023272:52775-52794 | None:intergenic | 45.0% | |
TCAGAAGAATTCGGTACGCA+TGG | - | tig0023272:52776-52795 | None:intergenic | 45.0% | |
TTTATAAAGGATGGGGGTGG+GGG | - | tig0023272:53548-53567 | None:intergenic | 45.0% | |
CTTTATAAAGGATGGGGGTG+GGG | - | tig0023272:53549-53568 | None:intergenic | 45.0% | |
!! | CAATATAAAAAAAAAAAAAA+TGG | - | tig0023272:52343-52362 | None:intergenic | 5.0% |
!!! | CATTTTTTTTTTTTTTATAT+TGG | + | tig0023272:52341-52360 | Msa1407150:intron | 5.0% |
!!! | AATATCATAAATTTAAAATA+TGG | - | tig0023272:53141-53160 | None:intergenic | 5.0% |
! | TGTGGTTTGGATGGAGAACG+AGG | + | tig0023272:47114-47133 | Msa1407150:exon | 50.0% |
!! | TGAGATGATGGACGAGGATG+AGG | + | tig0023272:47192-47211 | Msa1407150:CDS | 50.0% |
!!! | CGGTGCTGTTTATTTTCCCG+AGG | + | tig0023272:47273-47292 | Msa1407150:CDS | 50.0% |
!! | GCTGTTTATTTTCCCGAGGC+CGG | + | tig0023272:47277-47296 | Msa1407150:CDS | 50.0% |
CTCAGAAGGTTCCAGATCTC+CGG | - | tig0023272:47299-47318 | None:intergenic | 50.0% | |
! | GGAGATCTGGAACCTTCTGA+GGG | + | tig0023272:47298-47317 | Msa1407150:CDS | 50.0% |
! | TCTGGAACCTTCTGAGGGTA+TGG | + | tig0023272:47303-47322 | Msa1407150:CDS | 50.0% |
GAAACCAACACGACGAGCAT+AGG | - | tig0023272:47368-47387 | None:intergenic | 50.0% | |
TCTGAATGATAGCTCCGTCG+CGG | - | tig0023272:47423-47442 | None:intergenic | 50.0% | |
CAACCCTTGTGACTGTTCGT+GGG | - | tig0023272:47519-47538 | None:intergenic | 50.0% | |
TGCACGATTCTTCTGCCAAG+TGG | + | tig0023272:47566-47585 | Msa1407150:CDS | 50.0% | |
TCTGCCAAGTGGATCGTATC+TGG | + | tig0023272:47577-47596 | Msa1407150:CDS | 50.0% | |
GAAGCCAGATACGATCCACT+TGG | - | tig0023272:47584-47603 | None:intergenic | 50.0% | |
ACGAAGGCAGTGAACCTGAT+CGG | - | tig0023272:47638-47657 | None:intergenic | 50.0% | |
AAATTTGCCGGTGGGAACGA+AGG | - | tig0023272:47654-47673 | None:intergenic | 50.0% | |
CAGATCCAGAAATTTGCCGG+TGG | - | tig0023272:47663-47682 | None:intergenic | 50.0% | |
CACTTTACAGGCTGCTGGTA+TGG | + | tig0023272:47699-47718 | Msa1407150:CDS | 50.0% | |
!! | CAGCAAGGTTGGCTTTACTG+AGG | + | tig0023272:47768-47787 | Msa1407150:CDS | 50.0% |
TCAGTGGTTATGGAGAGTGG+GGG | - | tig0023272:48180-48199 | None:intergenic | 50.0% | |
AGAAACGGTGACGAGTGTCT+GGG | - | tig0023272:48242-48261 | None:intergenic | 50.0% | |
CGGCTTCAAAGTTTGGGAAC+TGG | - | tig0023272:48317-48336 | None:intergenic | 50.0% | |
GCTATCACTTCGCTGAGTGA+TGG | - | tig0023272:48511-48530 | None:intergenic | 50.0% | |
CACTCGATTCCAAGAGGAGT+TGG | + | tig0023272:48728-48747 | Msa1407150:CDS | 50.0% | |
! | CGATTCCAAGAGGAGTTGGT+TGG | + | tig0023272:48732-48751 | Msa1407150:CDS | 50.0% |
GGTTGGCACGCTAACATTCA+TGG | + | tig0023272:48749-48768 | Msa1407150:CDS | 50.0% | |
GCATCCAAAGCTGAGGATGA+TGG | + | tig0023272:48771-48790 | Msa1407150:CDS | 50.0% | |
AGCTGCAAAAAGAGTTGCGC+AGG | + | tig0023272:49169-49188 | Msa1407150:CDS | 50.0% | |
AGTTGCGCAGGTAATGCGAA+AGG | + | tig0023272:49181-49200 | Msa1407150:CDS | 50.0% | |
GGAGAACTCCCATCAGCAAT+GGG | + | tig0023272:49207-49226 | Msa1407150:CDS | 50.0% | |
AACTCCCATCAGCAATGGGA+AGG | + | tig0023272:49211-49230 | Msa1407150:CDS | 50.0% | |
CCTAACCTTCCCATTGCTGA+TGG | - | tig0023272:49219-49238 | None:intergenic | 50.0% | |
CCATCAGCAATGGGAAGGTT+AGG | + | tig0023272:49216-49235 | Msa1407150:CDS | 50.0% | |
TGGCTGTCAGGATGAAAGCT+TGG | + | tig0023272:49280-49299 | Msa1407150:CDS | 50.0% | |
GGCTGTCAGGATGAAAGCTT+GGG | + | tig0023272:49281-49300 | Msa1407150:CDS | 50.0% | |
TGGCCACACATCAAGTCCAA+AGG | + | tig0023272:49605-49624 | Msa1407150:intron | 50.0% | |
GCTCTCAAGGTAAGGCTAGT+TGG | + | tig0023272:49718-49737 | Msa1407150:intron | 50.0% | |
GACCCTATCAGAGAGACCTA+AGG | - | tig0023272:50383-50402 | None:intergenic | 50.0% | |
GAAACACATGTGGCAGAGAG+TGG | + | tig0023272:50467-50486 | Msa1407150:intron | 50.0% | |
! | GTCTCTAGGTGCTTTTGCTC+TGG | + | tig0023272:50597-50616 | Msa1407150:intron | 50.0% |
!! | GGTGCCATTAATGGCACCAA+TGG | + | tig0023272:51223-51242 | Msa1407150:intron | 50.0% |
!! | GGTGCCATTGGTGCCATTAA+TGG | - | tig0023272:51230-51249 | None:intergenic | 50.0% |
! | GTGGTGGAGATGGAATTGGA+TGG | - | tig0023272:51251-51270 | None:intergenic | 50.0% |
! | GTGTGTGGTGGAGATGGAAT+TGG | - | tig0023272:51255-51274 | None:intergenic | 50.0% |
! | ATGTGTGTGTGTGGTGGAGA+TGG | - | tig0023272:51261-51280 | None:intergenic | 50.0% |
TGTGTGATGTGTGTGTGTGG+TGG | - | tig0023272:51267-51286 | None:intergenic | 50.0% | |
GTGTGTGTGATGTGTGTGTG+TGG | - | tig0023272:51270-51289 | None:intergenic | 50.0% | |
GATCTCTGCTATGGCACCAA+TGG | + | tig0023272:51324-51343 | Msa1407150:intron | 50.0% | |
! | GATGCGTTTTCTTCCCAACG+TGG | + | tig0023272:51439-51458 | Msa1407150:intron | 50.0% |
CCTTGAAACTGATCCCACGT+TGG | - | tig0023272:51456-51475 | None:intergenic | 50.0% | |
CCAACGTGGGATCAGTTTCA+AGG | + | tig0023272:51453-51472 | Msa1407150:intron | 50.0% | |
! | TCGTCTTTGGTGCGTTAGGT+AGG | - | tig0023272:51620-51639 | None:intergenic | 50.0% |
TACCTAACGCACCAAAGACG+AGG | + | tig0023272:51619-51638 | Msa1407150:intron | 50.0% | |
! | AACCTCGTCTTTGGTGCGTT+AGG | - | tig0023272:51624-51643 | None:intergenic | 50.0% |
TTGACTAGCGAACCGCGAAT+TGG | + | tig0023272:52046-52065 | Msa1407150:intron | 50.0% | |
!! | TACGCGAAAGTACCGCGAAT+CGG | - | tig0023272:52082-52101 | None:intergenic | 50.0% |
TTCGCGGTACTTTCGCGTAT+TGG | + | tig0023272:52083-52102 | Msa1407150:intron | 50.0% | |
!! | TATTGGTTCCCCCCAATTCG+TGG | + | tig0023272:52100-52119 | Msa1407150:intron | 50.0% |
CCGCAAATTTCGCCACGAAT+TGG | - | tig0023272:52115-52134 | None:intergenic | 50.0% | |
AAACGAGCGATGGAGAGTGA+AGG | + | tig0023272:52162-52181 | Msa1407150:intron | 50.0% | |
AACGAGCGATGGAGAGTGAA+GGG | + | tig0023272:52163-52182 | Msa1407150:intron | 50.0% | |
GAAGGGAGAACTGTGAGTTG+AGG | + | tig0023272:52180-52199 | Msa1407150:intron | 50.0% | |
GAAGAATTCGGTACGCATGG+GGG | - | tig0023272:52773-52792 | None:intergenic | 50.0% | |
TTATAAAGGATGGGGGTGGG+GGG | - | tig0023272:53547-53566 | None:intergenic | 50.0% | |
GGTTTGGATGGAGAACGAGG+TGG | + | tig0023272:47117-47136 | Msa1407150:exon | 55.0% | |
GCCGCCGCATATTGAGATGA+TGG | + | tig0023272:47180-47199 | Msa1407150:CDS | 55.0% | |
!! | GATGATGGACGAGGATGAGG+AGG | + | tig0023272:47195-47214 | Msa1407150:CDS | 55.0% |
! | CGGAGATCTGGAACCTTCTG+AGG | + | tig0023272:47297-47316 | Msa1407150:CDS | 55.0% |
CGAGTCTGAAGAGGCTGCTA+AGG | + | tig0023272:47330-47349 | Msa1407150:CDS | 55.0% | |
AACGCCCACGAACAGTCACA+AGG | + | tig0023272:47512-47531 | Msa1407150:CDS | 55.0% | |
ACGCCCACGAACAGTCACAA+GGG | + | tig0023272:47513-47532 | Msa1407150:CDS | 55.0% | |
CCAACCCTTGTGACTGTTCG+TGG | - | tig0023272:47520-47539 | None:intergenic | 55.0% | |
CCACGAACAGTCACAAGGGT+TGG | + | tig0023272:47517-47536 | Msa1407150:CDS | 55.0% | |
! | CGAACTTGTTCCACCCGATC+AGG | + | tig0023272:47621-47640 | Msa1407150:CDS | 55.0% |
CGAAGGCAGTGAACCTGATC+GGG | - | tig0023272:47637-47656 | None:intergenic | 55.0% | |
TTCACTGCCTTCGTTCCCAC+CGG | + | tig0023272:47644-47663 | Msa1407150:CDS | 55.0% | |
CGTTCCCACCGGCAAATTTC+TGG | + | tig0023272:47655-47674 | Msa1407150:CDS | 55.0% | |
GGGGTCAGCCCAGAAAACAT+TGG | - | tig0023272:47947-47966 | None:intergenic | 55.0% | |
! | TGTTTTCTGGGCTGACCCCA+AGG | + | tig0023272:47948-47967 | Msa1407150:CDS | 55.0% |
ACATGGCTTACCGCCATGTC+TGG | + | tig0023272:48150-48169 | Msa1407150:CDS | 55.0% | |
CAGTGGTTATGGAGAGTGGG+GGG | - | tig0023272:48179-48198 | None:intergenic | 55.0% | |
CAGAAACGGTGACGAGTGTC+TGG | - | tig0023272:48243-48262 | None:intergenic | 55.0% | |
CTCGTCACCGTTTCTGCAAG+TGG | + | tig0023272:48247-48266 | Msa1407150:CDS | 55.0% | |
TACATTCCGCTTGCAGGCAC+TGG | + | tig0023272:48445-48464 | Msa1407150:CDS | 55.0% | |
ACATTCCGCTTGCAGGCACT+GGG | + | tig0023272:48446-48465 | Msa1407150:CDS | 55.0% | |
GGAGATGGGGTCCTCAATAC+TGG | - | tig0023272:48666-48685 | None:intergenic | 55.0% | |
ATTGAGGACCCCATCTCCGA+TGG | + | tig0023272:48668-48687 | Msa1407150:CDS | 55.0% | |
TTGCCTCTCCATCGGAGATG+GGG | - | tig0023272:48679-48698 | None:intergenic | 55.0% | |
CTTGCCTCTCCATCGGAGAT+GGG | - | tig0023272:48680-48699 | None:intergenic | 55.0% | |
TCGGATGCTTGCCTCTCCAT+CGG | - | tig0023272:48687-48706 | None:intergenic | 55.0% | |
CTCCCCATCATCCTCAGCTT+TGG | - | tig0023272:48778-48797 | None:intergenic | 55.0% | |
!! | CAAAGCTGAGGATGATGGGG+AGG | + | tig0023272:48776-48795 | Msa1407150:CDS | 55.0% |
TGCGCAGGTAATGCGAAAGG+AGG | + | tig0023272:49184-49203 | Msa1407150:CDS | 55.0% | |
GCGCAGGTAATGCGAAAGGA+GGG | + | tig0023272:49185-49204 | Msa1407150:CDS | 55.0% | |
CGCAGGTAATGCGAAAGGAG+GGG | + | tig0023272:49186-49205 | Msa1407150:CDS | 55.0% | |
GGGAGAACTCCCATCAGCAA+TGG | + | tig0023272:49206-49225 | Msa1407150:CDS | 55.0% | |
ACACATGTGGCAGAGAGTGG+TGG | + | tig0023272:50470-50489 | Msa1407150:intron | 55.0% | |
CACATGTGGCAGAGAGTGGT+GGG | + | tig0023272:50471-50490 | Msa1407150:intron | 55.0% | |
CTTGGTCAGGGGAGAGTGAT+AGG | - | tig0023272:50706-50725 | None:intergenic | 55.0% | |
ATCACACACACATCCCCACG+CGG | + | tig0023272:51279-51298 | Msa1407150:intron | 55.0% | |
TCCTGGCCGTTGATGTGTGT+GGG | - | tig0023272:51306-51325 | None:intergenic | 55.0% | |
ATCCTGGCCGTTGATGTGTG+TGG | - | tig0023272:51307-51326 | None:intergenic | 55.0% | |
AACGGCCAGGATCTCTGCTA+TGG | + | tig0023272:51315-51334 | Msa1407150:intron | 55.0% | |
!! | TGGTGCCATAGCAGAGATCC+TGG | - | tig0023272:51323-51342 | None:intergenic | 55.0% |
TGGTGCGTTAGGTAGGTGTG+TGG | - | tig0023272:51613-51632 | None:intergenic | 55.0% | |
!! | TTTGGCTGGTAGCGGCTGTT+AGG | + | tig0023272:52268-52287 | Msa1407150:intron | 55.0% |
!! | TGGTAGCGGCTGTTAGGATG+AGG | + | tig0023272:52274-52293 | Msa1407150:intron | 55.0% |
! | TCGGTACGCTTCGGTTCGTA+GGG | - | tig0023272:52741-52760 | None:intergenic | 55.0% |
! | TTCGGTACGCTTCGGTTCGT+AGG | - | tig0023272:52742-52761 | None:intergenic | 55.0% |
! | CGCATGGGGGTATAGAGCTT+CGG | - | tig0023272:52760-52779 | None:intergenic | 55.0% |
ATTCGTCCTGGTACGCGGTA+CGG | - | tig0023272:52816-52835 | None:intergenic | 55.0% | |
TCACGATTCGTCCTGGTACG+CGG | - | tig0023272:52821-52840 | None:intergenic | 55.0% | |
AGCATGAAAGACGGCCTCTG+AGG | + | tig0023272:53370-53389 | Msa1407150:CDS | 55.0% | |
! | ATGAAAGACGGCCTCTGAGG+AGG | + | tig0023272:53373-53392 | Msa1407150:exon | 55.0% |
ACTCCCACAATCCTCCTCAG+AGG | - | tig0023272:53387-53406 | None:intergenic | 55.0% | |
TATAAAGGATGGGGGTGGGG+GGG | - | tig0023272:53546-53565 | None:intergenic | 55.0% | |
TTGGGAGAAAGCAGCGGCAG+CGG | + | tig0023272:47253-47272 | Msa1407150:CDS | 60.0% | |
! | TTTTCCCGAGGCCGGAGATC+TGG | + | tig0023272:47285-47304 | Msa1407150:CDS | 60.0% |
AGGTTCCAGATCTCCGGCCT+CGG | - | tig0023272:47293-47312 | None:intergenic | 60.0% | |
AGGCAGTGAACCTGATCGGG+TGG | - | tig0023272:47634-47653 | None:intergenic | 60.0% | |
AGGTACCCAGTGCCTGCAAG+CGG | - | tig0023272:48454-48473 | None:intergenic | 60.0% | |
GCTTGCCTCTCCATCGGAGA+TGG | - | tig0023272:48681-48700 | None:intergenic | 60.0% | |
GCGTGCCAACCAACTCCTCT+TGG | - | tig0023272:48740-48759 | None:intergenic | 60.0% | |
TGATGTGTGTGGGTCCGCGT+GGG | - | tig0023272:51296-51315 | None:intergenic | 60.0% | |
TTGATGTGTGTGGGTCCGCG+TGG | - | tig0023272:51297-51316 | None:intergenic | 60.0% | |
CGCGGACCCACACACATCAA+CGG | + | tig0023272:51297-51316 | Msa1407150:intron | 60.0% | |
ACCCACACACATCAACGGCC+AGG | + | tig0023272:51302-51321 | Msa1407150:intron | 60.0% | |
!! | GAACCGCGAATTGGTTCGCG+CGG | + | tig0023272:52055-52074 | Msa1407150:intron | 60.0% |
TTCGTCCTGGTACGCGGTAC+GGG | - | tig0023272:52815-52834 | None:intergenic | 60.0% | |
! | ACGGCCTCTGAGGAGGATTG+TGG | + | tig0023272:53380-53399 | Msa1407150:exon | 60.0% |
! | CGGCCTCTGAGGAGGATTGT+GGG | + | tig0023272:53381-53400 | Msa1407150:exon | 60.0% |
ATAAAGGATGGGGGTGGGGG+GGG | - | tig0023272:53545-53564 | None:intergenic | 60.0% | |
GGTTCCAGATCTCCGGCCTC+GGG | - | tig0023272:47292-47311 | None:intergenic | 65.0% | |
TCTCGTCGTTCTCGCCGCGA+CGG | + | tig0023272:47406-47425 | Msa1407150:CDS | 65.0% | |
TCTGGGCTGACCCCAAGGCA+AGG | + | tig0023272:47953-47972 | Msa1407150:CDS | 65.0% | |
GGACCCCATCTCCGATGGAG+AGG | + | tig0023272:48673-48692 | Msa1407150:CDS | 65.0% | |
!! | GTGGCAGAGAGTGGTGGGTG+AGG | + | tig0023272:50476-50495 | Msa1407150:intron | 65.0% |
GATGTGTGTGGGTCCGCGTG+GGG | - | tig0023272:51295-51314 | None:intergenic | 65.0% | |
GGTCCGCGCGAACCAATTCG+CGG | - | tig0023272:52061-52080 | None:intergenic | 65.0% | |
TGGTACGCGGTACGGGTTCG+CGG | - | tig0023272:52808-52827 | None:intergenic | 65.0% | |
!! | TGGGGGGCGTCCAGACATGG+CGG | - | tig0023272:48163-48182 | None:intergenic | 70.0% |
!! | GAGTGGGGGGCGTCCAGACA+TGG | - | tig0023272:48166-48185 | None:intergenic | 70.0% |
!! | GGTTCGCGCGGACCGATTCG+CGG | + | tig0023272:52067-52086 | Msa1407150:intron | 70.0% |
GCGAACCCGTACCGCGTACC+AGG | + | tig0023272:52807-52826 | Msa1407150:intron | 70.0% | |
AGGATGGGGGTGGGGGGGGA+AGG | - | tig0023272:53541-53560 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0023272 | gene | 47021 | 53703 | 47021 | ID=Msa1407150;Name=Msa1407150 |
tig0023272 | mRNA | 47021 | 53703 | 47021 | ID=Msa1407150-mRNA-1;Parent=Msa1407150;Name=Msa1407150-mRNA-1;_AED=0.00;_eAED=0.00;_QI=103|1|1|1|1|1|2|313|789 |
tig0023272 | exon | 47021 | 49319 | 47021 | ID=Msa1407150-mRNA-1:exon:24913;Parent=Msa1407150-mRNA-1 |
tig0023272 | exon | 53217 | 53703 | 53217 | ID=Msa1407150-mRNA-1:exon:24914;Parent=Msa1407150-mRNA-1 |
tig0023272 | five_prime_UTR | 47021 | 47123 | 47021 | ID=Msa1407150-mRNA-1:five_prime_utr;Parent=Msa1407150-mRNA-1 |
tig0023272 | CDS | 47124 | 49319 | 47124 | ID=Msa1407150-mRNA-1:cds;Parent=Msa1407150-mRNA-1 |
tig0023272 | CDS | 53217 | 53390 | 53217 | ID=Msa1407150-mRNA-1:cds;Parent=Msa1407150-mRNA-1 |
tig0023272 | three_prime_UTR | 53391 | 53703 | 53391 | ID=Msa1407150-mRNA-1:three_prime_utr;Parent=Msa1407150-mRNA-1 |
Gene Sequence |
Protein sequence |