Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432090 | XP_024639602.1 | 97.845 | 789 | 14 | 2 | 1 | 789 | 1 | 786 | 0.0 | 1616 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432090 | sp|Q9SZL8|FRS5_ARATH | 70.705 | 809 | 195 | 8 | 1 | 789 | 2 | 788 | 0.0 | 1159 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432090 | A0A396HY09 | 97.845 | 789 | 14 | 2 | 1 | 789 | 1 | 786 | 0.0 | 1616 |
Gene ID | Type | Classification |
---|---|---|
Msa1432090 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1407150 | Msa1432090 | 0.883983 | 2.826154e-71 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432090 | MtrunA17_Chr5g0448761 | 97.845 | 789 | 14 | 2 | 1 | 789 | 1 | 786 | 0.0 | 1616 |
Msa1432090 | MtrunA17_Chr5g0448511 | 54.352 | 563 | 238 | 3 | 229 | 787 | 1 | 548 | 0.0 | 646 |
Msa1432090 | MtrunA17_Chr5g0440451 | 40.563 | 710 | 378 | 9 | 22 | 713 | 4 | 687 | 0.0 | 551 |
Msa1432090 | MtrunA17_Chr1g0202341 | 40.611 | 655 | 367 | 7 | 56 | 702 | 44 | 684 | 9.85e-173 | 513 |
Msa1432090 | MtrunA17_Chr3g0118611 | 45.818 | 550 | 266 | 6 | 177 | 704 | 36 | 575 | 9.64e-169 | 506 |
Msa1432090 | MtrunA17_Chr2g0329031 | 36.890 | 656 | 368 | 15 | 62 | 708 | 13 | 631 | 6.67e-142 | 436 |
Msa1432090 | MtrunA17_Chr1g0207551 | 35.957 | 648 | 398 | 9 | 44 | 690 | 15 | 646 | 2.95e-141 | 436 |
Msa1432090 | MtrunA17_Chr3g0080351 | 35.127 | 669 | 378 | 11 | 55 | 707 | 68 | 696 | 1.18e-140 | 436 |
Msa1432090 | MtrunA17_Chr2g0287061 | 36.767 | 631 | 345 | 12 | 61 | 689 | 181 | 759 | 2.46e-125 | 394 |
Msa1432090 | MtrunA17_Chr2g0287061 | 36.449 | 107 | 51 | 2 | 62 | 168 | 28 | 117 | 2.62e-13 | 73.9 |
Msa1432090 | MtrunA17_Chr5g0441581 | 34.789 | 664 | 389 | 17 | 62 | 716 | 31 | 659 | 3.06e-124 | 388 |
Msa1432090 | MtrunA17_Chr3g0082121 | 34.380 | 637 | 396 | 7 | 60 | 694 | 40 | 656 | 2.18e-120 | 378 |
Msa1432090 | MtrunA17_Chr2g0296781 | 36.851 | 578 | 337 | 12 | 67 | 633 | 1 | 561 | 1.07e-119 | 377 |
Msa1432090 | MtrunA17_Chr6g0458391 | 34.039 | 567 | 347 | 7 | 63 | 628 | 225 | 765 | 6.27e-111 | 355 |
Msa1432090 | MtrunA17_Chr6g0458391 | 34.694 | 147 | 84 | 4 | 61 | 200 | 89 | 230 | 2.79e-17 | 86.7 |
Msa1432090 | MtrunA17_Chr2g0324011 | 33.101 | 574 | 373 | 9 | 60 | 631 | 7 | 571 | 1.00e-106 | 339 |
Msa1432090 | MtrunA17_Chr8g0363841 | 34.859 | 568 | 357 | 10 | 66 | 629 | 20 | 578 | 1.47e-106 | 341 |
Msa1432090 | MtrunA17_Chr6g0477261 | 39.821 | 447 | 252 | 7 | 197 | 633 | 11 | 450 | 5.41e-104 | 334 |
Msa1432090 | MtrunA17_Chr1g0203721 | 30.818 | 636 | 415 | 8 | 66 | 691 | 66 | 686 | 7.54e-104 | 340 |
Msa1432090 | MtrunA17_Chr2g0291581 | 32.917 | 641 | 396 | 16 | 63 | 694 | 71 | 686 | 8.58e-104 | 334 |
Msa1432090 | MtrunA17_Chr2g0287651 | 32.389 | 565 | 370 | 8 | 67 | 629 | 79 | 633 | 3.21e-101 | 332 |
Msa1432090 | MtrunA17_Chr1g0196541 | 33.276 | 577 | 365 | 11 | 67 | 636 | 1 | 564 | 1.67e-98 | 321 |
Msa1432090 | MtrunA17_Chr2g0291591 | 35.146 | 515 | 299 | 14 | 62 | 564 | 63 | 554 | 9.49e-96 | 309 |
Msa1432090 | MtrunA17_Chr1g0203051 | 29.091 | 550 | 376 | 7 | 69 | 616 | 85 | 622 | 1.37e-87 | 290 |
Msa1432090 | MtrunA17_Chr1g0198761 | 30.511 | 626 | 394 | 14 | 37 | 640 | 14 | 620 | 8.21e-84 | 283 |
Msa1432090 | MtrunA17_Chr2g0276841 | 29.291 | 635 | 416 | 14 | 63 | 687 | 70 | 681 | 1.39e-82 | 278 |
Msa1432090 | MtrunA17_Chr2g0294841 | 28.193 | 642 | 435 | 13 | 60 | 692 | 42 | 666 | 1.91e-82 | 279 |
Msa1432090 | MtrunA17_Chr2g0290391 | 29.318 | 689 | 425 | 20 | 37 | 697 | 22 | 676 | 7.15e-73 | 251 |
Msa1432090 | MtrunA17_Chr5g0431001 | 31.136 | 440 | 284 | 9 | 55 | 481 | 50 | 483 | 1.05e-62 | 219 |
Msa1432090 | MtrunA17_Chr1g0164591 | 34.579 | 321 | 197 | 4 | 144 | 463 | 1 | 309 | 4.73e-60 | 206 |
Msa1432090 | MtrunA17_Chr7g0258861 | 37.113 | 291 | 173 | 6 | 60 | 347 | 7 | 290 | 7.00e-54 | 189 |
Msa1432090 | MtrunA17_Chr4g0033611 | 42.857 | 154 | 76 | 4 | 24 | 170 | 30 | 178 | 4.08e-28 | 114 |
Msa1432090 | MtrunA17_Chr3g0078041 | 52.778 | 108 | 48 | 2 | 62 | 169 | 49 | 153 | 1.24e-27 | 112 |
Msa1432090 | MtrunA17_Chr2g0329421 | 54.128 | 109 | 45 | 3 | 62 | 170 | 26 | 129 | 5.98e-26 | 106 |
Msa1432090 | MtrunA17_Chr7g0233911 | 51.852 | 108 | 49 | 3 | 62 | 169 | 33 | 137 | 1.92e-25 | 105 |
Msa1432090 | MtrunA17_Chr2g0329361 | 44.737 | 114 | 61 | 2 | 61 | 174 | 59 | 170 | 2.93e-25 | 105 |
Msa1432090 | MtrunA17_Chr2g0308841 | 23.982 | 221 | 167 | 1 | 408 | 627 | 6 | 226 | 2.12e-23 | 100 |
Msa1432090 | MtrunA17_Chr1g0149131 | 30.909 | 110 | 76 | 0 | 348 | 457 | 1 | 110 | 1.37e-16 | 76.6 |
Msa1432090 | MtrunA17_Chr5g0401121 | 39.640 | 111 | 64 | 2 | 63 | 173 | 56 | 163 | 1.41e-16 | 78.2 |
Msa1432090 | MtrunA17_Chr2g0331371 | 40.164 | 122 | 65 | 4 | 61 | 178 | 51 | 168 | 9.04e-13 | 68.2 |
Msa1432090 | MtrunA17_Chr1g0171741 | 33.621 | 116 | 70 | 3 | 67 | 180 | 137 | 247 | 1.91e-12 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432090 | AT4G38180.1 | 70.705 | 809 | 195 | 8 | 1 | 789 | 2 | 788 | 0.0 | 1159 |
Msa1432090 | AT2G27110.2 | 46.178 | 641 | 305 | 9 | 57 | 696 | 43 | 644 | 0.0 | 587 |
Msa1432090 | AT2G27110.1 | 46.178 | 641 | 305 | 9 | 57 | 696 | 43 | 644 | 0.0 | 587 |
Msa1432090 | AT4G38170.1 | 48.540 | 548 | 261 | 5 | 241 | 787 | 18 | 545 | 0.0 | 547 |
Msa1432090 | AT2G27110.3 | 52.778 | 468 | 213 | 3 | 229 | 696 | 40 | 499 | 3.29e-177 | 526 |
Msa1432090 | AT4G15090.1 | 36.078 | 668 | 411 | 9 | 50 | 715 | 38 | 691 | 3.27e-150 | 460 |
Msa1432090 | AT4G15090.5 | 36.078 | 668 | 411 | 9 | 50 | 715 | 38 | 691 | 3.27e-150 | 460 |
Msa1432090 | AT4G15090.3 | 36.078 | 668 | 411 | 9 | 50 | 715 | 38 | 691 | 3.27e-150 | 460 |
Msa1432090 | AT4G15090.2 | 36.078 | 668 | 411 | 9 | 50 | 715 | 38 | 691 | 3.27e-150 | 460 |
Msa1432090 | AT4G15090.4 | 36.078 | 668 | 411 | 9 | 50 | 715 | 38 | 691 | 3.27e-150 | 460 |
Msa1432090 | AT3G22170.2 | 34.795 | 684 | 390 | 10 | 24 | 690 | 30 | 674 | 6.95e-143 | 441 |
Msa1432090 | AT3G22170.1 | 34.795 | 684 | 390 | 10 | 24 | 690 | 30 | 674 | 6.95e-143 | 441 |
Msa1432090 | AT1G76320.3 | 36.943 | 628 | 361 | 12 | 67 | 688 | 1 | 599 | 1.69e-133 | 412 |
Msa1432090 | AT5G18960.2 | 37.143 | 630 | 337 | 12 | 62 | 687 | 210 | 784 | 3.47e-133 | 415 |
Msa1432090 | AT5G18960.2 | 39.837 | 123 | 48 | 4 | 46 | 168 | 35 | 131 | 7.08e-17 | 85.9 |
Msa1432090 | AT5G18960.1 | 37.143 | 630 | 337 | 12 | 62 | 687 | 210 | 784 | 3.47e-133 | 415 |
Msa1432090 | AT5G18960.1 | 39.837 | 123 | 48 | 4 | 46 | 168 | 35 | 131 | 7.08e-17 | 85.9 |
Msa1432090 | AT1G76320.1 | 36.943 | 628 | 361 | 12 | 67 | 688 | 1 | 599 | 8.52e-133 | 412 |
Msa1432090 | AT1G76320.4 | 36.943 | 628 | 361 | 12 | 67 | 688 | 1 | 599 | 8.52e-133 | 412 |
Msa1432090 | AT1G76320.2 | 36.943 | 628 | 361 | 12 | 67 | 688 | 1 | 599 | 9.46e-133 | 412 |
Msa1432090 | AT3G06250.2 | 36.090 | 665 | 349 | 15 | 40 | 687 | 155 | 760 | 3.31e-132 | 411 |
Msa1432090 | AT3G06250.2 | 41.667 | 108 | 46 | 3 | 61 | 168 | 26 | 116 | 1.06e-16 | 85.1 |
Msa1432090 | AT3G06250.1 | 36.090 | 665 | 349 | 15 | 40 | 687 | 155 | 760 | 3.31e-132 | 411 |
Msa1432090 | AT3G06250.1 | 41.667 | 108 | 46 | 3 | 61 | 168 | 26 | 116 | 1.06e-16 | 85.1 |
Msa1432090 | AT3G06250.3 | 36.090 | 665 | 349 | 15 | 40 | 687 | 155 | 760 | 3.31e-132 | 411 |
Msa1432090 | AT3G06250.3 | 41.667 | 108 | 46 | 3 | 61 | 168 | 26 | 116 | 1.06e-16 | 85.1 |
Msa1432090 | AT4G19990.3 | 35.148 | 643 | 354 | 15 | 60 | 686 | 18 | 613 | 1.65e-118 | 375 |
Msa1432090 | AT4G19990.4 | 35.148 | 643 | 354 | 15 | 60 | 686 | 18 | 613 | 1.65e-118 | 375 |
Msa1432090 | AT4G19990.5 | 35.148 | 643 | 354 | 15 | 60 | 686 | 18 | 613 | 2.09e-118 | 375 |
Msa1432090 | AT4G19990.7 | 35.148 | 643 | 354 | 15 | 60 | 686 | 32 | 627 | 3.75e-118 | 375 |
Msa1432090 | AT4G19990.6 | 35.148 | 643 | 354 | 15 | 60 | 686 | 18 | 613 | 7.01e-118 | 374 |
Msa1432090 | AT4G19990.2 | 35.148 | 643 | 354 | 15 | 60 | 686 | 18 | 613 | 7.01e-118 | 374 |
Msa1432090 | AT2G32250.5 | 33.132 | 661 | 386 | 9 | 25 | 685 | 1 | 605 | 1.60e-115 | 367 |
Msa1432090 | AT2G32250.2 | 33.132 | 661 | 386 | 9 | 25 | 685 | 1 | 605 | 3.53e-115 | 368 |
Msa1432090 | AT2G32250.4 | 33.132 | 661 | 386 | 9 | 25 | 685 | 1 | 605 | 3.53e-115 | 368 |
Msa1432090 | AT2G32250.6 | 33.585 | 661 | 383 | 9 | 25 | 685 | 1 | 605 | 5.08e-115 | 367 |
Msa1432090 | AT2G32250.1 | 33.585 | 661 | 383 | 9 | 25 | 685 | 1 | 605 | 5.08e-115 | 367 |
Msa1432090 | AT2G32250.3 | 33.585 | 661 | 383 | 9 | 25 | 685 | 1 | 605 | 5.08e-115 | 367 |
Msa1432090 | AT2G32250.7 | 33.603 | 619 | 356 | 8 | 67 | 685 | 1 | 564 | 2.16e-113 | 362 |
Msa1432090 | AT2G32250.8 | 33.603 | 619 | 356 | 8 | 67 | 685 | 1 | 564 | 2.26e-113 | 362 |
Msa1432090 | AT4G19990.1 | 33.777 | 601 | 335 | 15 | 102 | 686 | 3 | 556 | 3.50e-103 | 333 |
Msa1432090 | AT1G52520.1 | 31.019 | 677 | 420 | 19 | 35 | 694 | 56 | 702 | 1.58e-96 | 316 |
Msa1432090 | AT1G80010.1 | 30.488 | 656 | 404 | 17 | 63 | 693 | 95 | 723 | 2.69e-91 | 302 |
Msa1432090 | AT1G10240.2 | 28.080 | 698 | 462 | 17 | 18 | 705 | 3 | 670 | 2.77e-84 | 282 |
Msa1432090 | AT1G10240.1 | 28.080 | 698 | 462 | 17 | 18 | 705 | 3 | 670 | 2.77e-84 | 282 |
Msa1432090 | AT5G28530.1 | 31.399 | 586 | 361 | 15 | 63 | 627 | 55 | 620 | 3.19e-75 | 258 |
Msa1432090 | AT5G28530.3 | 31.399 | 586 | 357 | 16 | 63 | 627 | 55 | 616 | 5.58e-75 | 257 |
Msa1432090 | AT5G28530.2 | 31.399 | 586 | 357 | 16 | 63 | 627 | 55 | 616 | 5.58e-75 | 257 |
Msa1432090 | AT5G28530.4 | 28.522 | 575 | 329 | 16 | 63 | 627 | 55 | 557 | 4.28e-53 | 195 |
Msa1432090 | AT5G28530.5 | 28.522 | 575 | 325 | 17 | 63 | 627 | 55 | 553 | 7.93e-53 | 194 |
Msa1432090 | AT3G59470.3 | 43.429 | 175 | 78 | 5 | 12 | 170 | 3 | 172 | 6.39e-30 | 119 |
Msa1432090 | AT3G59470.1 | 43.429 | 175 | 78 | 5 | 12 | 170 | 3 | 172 | 6.39e-30 | 119 |
Msa1432090 | AT3G59470.2 | 43.429 | 175 | 78 | 5 | 12 | 170 | 15 | 184 | 7.75e-30 | 119 |
Msa1432090 | AT2G43280.1 | 45.455 | 143 | 68 | 4 | 37 | 177 | 1 | 135 | 1.01e-28 | 114 |
Msa1432090 | AT3G07500.1 | 47.368 | 133 | 65 | 3 | 39 | 170 | 8 | 136 | 1.60e-27 | 111 |
Msa1432090 | AT2G43280.2 | 48.039 | 102 | 48 | 3 | 78 | 177 | 2 | 100 | 4.32e-21 | 91.7 |
Msa1432090 | AT4G12850.2 | 42.982 | 114 | 55 | 3 | 58 | 168 | 3 | 109 | 1.04e-20 | 89.4 |
Msa1432090 | AT4G12850.4 | 42.982 | 114 | 55 | 3 | 58 | 168 | 3 | 109 | 2.54e-20 | 88.6 |
Msa1432090 | AT4G12850.1 | 42.982 | 114 | 55 | 3 | 58 | 168 | 3 | 109 | 2.65e-20 | 89.7 |
Find 195 sgRNAs with CRISPR-Local
Find 487 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTTCCCACCGGCAAATTTC+TGG | 0.095237 | tig0026950:+6199 | Msa1432090:CDS |
CAAAGAAGAAATTAGGATTT+TGG | 0.123283 | tig0026950:-6426 | None:intergenic |
ACCTTTATCAACAAATTTAA+AGG | 0.150987 | tig0026950:-7643 | None:intergenic |
TCATGTATATACTTACTATT+TGG | 0.183092 | tig0026950:+7581 | Msa1432090:CDS |
TTACCCTTTGCTCCCTTTAC+TGG | 0.199899 | tig0026950:+6586 | Msa1432090:CDS |
ACATATCATGTAGCTAAATT+TGG | 0.219908 | tig0026950:+7348 | Msa1432090:CDS |
CATGGTCAACCTGTTCTCTT+TGG | 0.223496 | tig0026950:+6619 | Msa1432090:CDS |
TGAACAGCAAAGAAGAAATT+AGG | 0.236435 | tig0026950:-6433 | None:intergenic |
CCTTCTTTGCAGACATATTC+TGG | 0.237940 | tig0026950:+7455 | Msa1432090:CDS |
AGAAGAAGAAGATGATGATT+TGG | 0.241377 | tig0026950:+5778 | Msa1432090:CDS |
TTTGCAACATCATAAGTTTC+AGG | 0.247657 | tig0026950:-7675 | None:intergenic |
GCCTTTAAATTTGTTGATAA+AGG | 0.252707 | tig0026950:+7642 | Msa1432090:CDS |
AACCCTAATTGACACTTTAC+AGG | 0.254986 | tig0026950:+6231 | Msa1432090:CDS |
TGAAACTCGGCTTCAAAGTT+TGG | 0.256048 | tig0026950:-6865 | None:intergenic |
CAGCCTGTAAAGTGTCAATT+AGG | 0.264947 | tig0026950:-6234 | None:intergenic |
TTGCAAACTGACGTTGCTTT+TGG | 0.278488 | tig0026950:-7547 | None:intergenic |
TAATATCTTGCAGGATGATA+TGG | 0.290977 | tig0026950:+11963 | Msa1432090:intron |
AATTTCTTCTTTGCTGTTCA+AGG | 0.292471 | tig0026950:+6436 | Msa1432090:CDS |
CACTTTACAGGCTGCTGGTA+TGG | 0.294110 | tig0026950:+6243 | Msa1432090:CDS |
TCTGCCAAGTGGATCGTATC+TGG | 0.294800 | tig0026950:+6121 | Msa1432090:CDS |
GTAGAATTTGATATTGGTTT+GGG | 0.307344 | tig0026950:+5683 | Msa1432090:CDS |
GGTAGAATTTGATATTGGTT+TGG | 0.326592 | tig0026950:+5682 | Msa1432090:CDS |
CTTAAAGAACTGATTTAAAC+TGG | 0.329541 | tig0026950:-7112 | None:intergenic |
GCGTTTGATCTCTCTGTCTT+TGG | 0.332960 | tig0026950:-6038 | None:intergenic |
AAGCAATACATTCCGCTTGC+AGG | 0.336808 | tig0026950:+6983 | Msa1432090:CDS |
TTGACGAATTTGAGTCTTGC+TGG | 0.341126 | tig0026950:+6914 | Msa1432090:CDS |
GTGTAATTCAACCTTGCCTT+GGG | 0.343488 | tig0026950:-6508 | None:intergenic |
CTCCCCATCATCCTCAGCTT+TGG | 0.350878 | tig0026950:-7319 | None:intergenic |
GAAGAAGAAGATGATGATTT+GGG | 0.351944 | tig0026950:+5779 | Msa1432090:CDS |
TACATTCCGCTTGCAGGCAC+TGG | 0.358152 | tig0026950:+6989 | Msa1432090:CDS |
TTGTTTGTTTGTTTGTGGTT+TGG | 0.366669 | tig0026950:+5645 | Msa1432090:five_prime_UTR |
AGCATGAACTCTTACTTTGA+TGG | 0.369267 | tig0026950:+7072 | Msa1432090:CDS |
AGATTATCTCAACTTTATAA+AGG | 0.373588 | tig0026950:-12317 | None:intergenic |
TTGCAGATCCAGAAATTTGC+CGG | 0.376547 | tig0026950:-6207 | None:intergenic |
GGAGATGGGGTCCTCAATAC+TGG | 0.377437 | tig0026950:-7207 | None:intergenic |
AAACTGAAGCTTCCTTTGTC+TGG | 0.378773 | tig0026950:+6662 | Msa1432090:CDS |
GCTTTACTGAGGTTGATTGT+AGG | 0.379314 | tig0026950:+6323 | Msa1432090:CDS |
AACAAAATGGGGTTATTCAT+AGG | 0.382440 | tig0026950:-12237 | None:intergenic |
ACATGGCTTACCGCCATGTC+TGG | 0.388564 | tig0026950:+6694 | Msa1432090:CDS |
ACACTACTTACCGCTCTAAC+AGG | 0.393642 | tig0026950:+6557 | Msa1432090:CDS |
GAAACTCGGCTTCAAAGTTT+GGG | 0.402169 | tig0026950:-6864 | None:intergenic |
GGTATTTGTTTGTTTGTTTG+TGG | 0.403783 | tig0026950:+5640 | Msa1432090:five_prime_UTR |
CGGCTTCAAAGTTTGGGAAC+TGG | 0.404355 | tig0026950:-6858 | None:intergenic |
TCTGCACTCATCAAAGAGTA+TGG | 0.412149 | tig0026950:+6283 | Msa1432090:CDS |
GGTTGGCACGCTAACATTCA+TGG | 0.415317 | tig0026950:+7293 | Msa1432090:CDS |
ATGAGCTTGAGTGTGCAAAT+AGG | 0.424341 | tig0026950:+12010 | Msa1432090:CDS |
AGAATCGTGATCAGTGGTTA+TGG | 0.425259 | tig0026950:-6731 | None:intergenic |
CTTGCCTCTCCATCGGAGAT+GGG | 0.427432 | tig0026950:-7221 | None:intergenic |
AGGTTCCAGATCTCCGGCCT+CGG | 0.431500 | tig0026950:-5834 | None:intergenic |
TGGTTTGGGAGGAGAATATG+AGG | 0.434179 | tig0026950:+5697 | Msa1432090:CDS |
TATCTCAACTTTATAAAGGA+TGG | 0.439799 | tig0026950:-12313 | None:intergenic |
GGCCTGAAAACTCAAACATT+TGG | 0.440126 | tig0026950:-7434 | None:intergenic |
GAGGTGGTAGAATTTGATAT+TGG | 0.442215 | tig0026950:+5677 | Msa1432090:CDS |
CCATCAGCAATGGGAAGGTT+AGG | 0.443830 | tig0026950:+7760 | Msa1432090:CDS |
CGAAGGCAGTGAACCTGATC+GGG | 0.445748 | tig0026950:-6178 | None:intergenic |
TTGTTTGTTTGTGGTTTGGA+TGG | 0.447891 | tig0026950:+5649 | Msa1432090:exon |
CCAGAATATGTCTGCAAAGA+AGG | 0.449302 | tig0026950:-7455 | None:intergenic |
CCAACCCTTGTGACTGTTCG+TGG | 0.450668 | tig0026950:-6061 | None:intergenic |
CGAACTTGTTCCACCCGATC+AGG | 0.450679 | tig0026950:+6165 | Msa1432090:CDS |
ATCTCAACTTTATAAAGGAT+GGG | 0.450680 | tig0026950:-12312 | None:intergenic |
TGAGATGATGGACGAGGATG+AGG | 0.456458 | tig0026950:+5736 | Msa1432090:CDS |
CACTCGATTCCAAGAGGAGT+TGG | 0.457309 | tig0026950:+7272 | Msa1432090:CDS |
TTGGGAGAAAGCAGCGGCAG+CGG | 0.460216 | tig0026950:+5797 | Msa1432090:CDS |
TAATTACACTAGTGGCTGTC+AGG | 0.463053 | tig0026950:+7812 | Msa1432090:CDS |
AGCCTGTAAAGTGTCAATTA+GGG | 0.465989 | tig0026950:-6233 | None:intergenic |
GCGTGCCAACCAACTCCTCT+TGG | 0.469006 | tig0026950:-7281 | None:intergenic |
TTGCAACATCATAAGTTTCA+GGG | 0.472255 | tig0026950:-7674 | None:intergenic |
GGCTGTCAGGATGAAAGCTT+GGG | 0.472435 | tig0026950:+7825 | Msa1432090:CDS |
AATGTGTCTCGCAAATATAC+AGG | 0.473103 | tig0026950:-7015 | None:intergenic |
GCATCCAAAGCTGAGGATGA+TGG | 0.473156 | tig0026950:+7315 | Msa1432090:CDS |
TCTGGAACCTTCTGAGGGTA+TGG | 0.473420 | tig0026950:+5847 | Msa1432090:CDS |
TGGCTGTCAGGATGAAAGCT+TGG | 0.476969 | tig0026950:+7824 | Msa1432090:CDS |
ACTTTACAGGCTGCTGGTAT+GGG | 0.477051 | tig0026950:+6244 | Msa1432090:CDS |
AAAGCACAACCAAAGAGAAC+AGG | 0.481412 | tig0026950:-6628 | None:intergenic |
CATCCAAAGCTGAGGATGAT+GGG | 0.487357 | tig0026950:+7316 | Msa1432090:CDS |
CGGCCTCTGAGGAGGATTGT+GGG | 0.492172 | tig0026950:+12140 | Msa1432090:exon |
CCTAACCTTCCCATTGCTGA+TGG | 0.492796 | tig0026950:-7760 | None:intergenic |
TATAATGAGATGGAAGAGTA+AGG | 0.493011 | tig0026950:-7500 | None:intergenic |
TGATGGTTTACACCAGTAAA+GGG | 0.493735 | tig0026950:-6598 | None:intergenic |
CGGAGATCTGGAACCTTCTG+AGG | 0.494898 | tig0026950:+5841 | Msa1432090:CDS |
TGAATACTTTGCCAGTATTG+AGG | 0.495207 | tig0026950:+7196 | Msa1432090:CDS |
TTCACTGCCTTCGTTCCCAC+CGG | 0.499535 | tig0026950:+6188 | Msa1432090:CDS |
CGAGTCTGAAGAGGCTGCTA+AGG | 0.500073 | tig0026950:+5874 | Msa1432090:CDS |
ATGATCTCAGGGACAATGAA+TGG | 0.501996 | tig0026950:+6956 | Msa1432090:CDS |
GGTTCCAGATCTCCGGCCTC+GGG | 0.504308 | tig0026950:-5833 | None:intergenic |
AATTCCTATGCTCGTCGTGT+TGG | 0.505166 | tig0026950:+5905 | Msa1432090:CDS |
GAATTTGATATTGGTTTGGG+AGG | 0.506640 | tig0026950:+5686 | Msa1432090:CDS |
TAAGCATATCACGAAACTTA+CGG | 0.506729 | tig0026950:+11987 | Msa1432090:CDS |
ATGATGGTTTACACCAGTAA+AGG | 0.513575 | tig0026950:-6599 | None:intergenic |
AGTGTAATTCAACCTTGCCT+TGG | 0.518295 | tig0026950:-6509 | None:intergenic |
CTCATTATATACTCAAACGC+TGG | 0.519018 | tig0026950:+7514 | Msa1432090:CDS |
GAGACAATTCGTTTGTGCTA+AGG | 0.519061 | tig0026950:+5985 | Msa1432090:CDS |
TCTCAACTTTATAAAGGATG+GGG | 0.519857 | tig0026950:-12311 | None:intergenic |
AGCCCAGAAAACATTGGTGA+TGG | 0.521427 | tig0026950:-6482 | None:intergenic |
AAATGTGAGACAACTTCTCC+TGG | 0.528603 | tig0026950:-6831 | None:intergenic |
GGGAGTACATAGAAACAGAT+AGG | 0.530239 | tig0026950:+12160 | Msa1432090:three_prime_UTR |
GGAGAACTCCCATCAGCAAT+GGG | 0.531715 | tig0026950:+7751 | Msa1432090:CDS |
ATTGACACTTTACAGGCTGC+TGG | 0.532057 | tig0026950:+6238 | Msa1432090:CDS |
ACGGCCTCTGAGGAGGATTG+TGG | 0.532458 | tig0026950:+12139 | Msa1432090:exon |
GTTAGAGTTGTCAGTAAAGG+TGG | 0.534829 | tig0026950:+12092 | Msa1432090:CDS |
AGAGAACAGGTTGACCATGA+TGG | 0.535460 | tig0026950:-6615 | None:intergenic |
CAATTCGTTTGTGCTAAGGA+AGG | 0.537258 | tig0026950:+5989 | Msa1432090:CDS |
CTCAGAAGGTTCCAGATCTC+CGG | 0.537315 | tig0026950:-5840 | None:intergenic |
GAAACCAACACGACGAGCAT+AGG | 0.538449 | tig0026950:-5909 | None:intergenic |
ACGAAGGCAGTGAACCTGAT+CGG | 0.539597 | tig0026950:-6179 | None:intergenic |
TATGGTGGTATCAGCAAGGT+TGG | 0.539841 | tig0026950:+6301 | Msa1432090:CDS |
CAAGTTAGAGTTGTCAGTAA+AGG | 0.539938 | tig0026950:+12089 | Msa1432090:CDS |
TCTGGGCTGACCCCAAGGCA+AGG | 0.540324 | tig0026950:+6497 | Msa1432090:CDS |
GATCAGTGGTTATGGAGAGT+GGG | 0.543305 | tig0026950:-6723 | None:intergenic |
TCTCGTCGTTCTCGCCGCGA+CGG | 0.544434 | tig0026950:+5950 | Msa1432090:CDS |
GGGAGAACTCCCATCAGCAA+TGG | 0.547438 | tig0026950:+7750 | Msa1432090:CDS |
AATCGCCATAAAAGTTTACA+AGG | 0.550036 | tig0026950:+6361 | Msa1432090:CDS |
TGATCAGTGGTTATGGAGAG+TGG | 0.550534 | tig0026950:-6724 | None:intergenic |
GCCGCCGCATATTGAGATGA+TGG | 0.551096 | tig0026950:+5724 | Msa1432090:CDS |
ACACCAGTAAAGGGAGCAAA+GGG | 0.551736 | tig0026950:-6589 | None:intergenic |
ATAGGAAATGTGAAATGTAC+CGG | 0.556375 | tig0026950:+12028 | Msa1432090:CDS |
GTTAACACATTTGTGAAACT+CGG | 0.558202 | tig0026950:-6878 | None:intergenic |
TCGGATGCTTGCCTCTCCAT+CGG | 0.558570 | tig0026950:-7228 | None:intergenic |
AATTCGTTTGTGCTAAGGAA+GGG | 0.559501 | tig0026950:+5990 | Msa1432090:CDS |
GCGCAGGTAATGCGAAAGGA+GGG | 0.559887 | tig0026950:+7729 | Msa1432090:CDS |
GATGATGGACGAGGATGAGG+AGG | 0.560621 | tig0026950:+5739 | Msa1432090:CDS |
GCTATCACTTCGCTGAGTGA+TGG | 0.562682 | tig0026950:-7052 | None:intergenic |
CGATTCCAAGAGGAGTTGGT+TGG | 0.567024 | tig0026950:+7276 | Msa1432090:CDS |
GCATATCTTTAAGCAATGCC+AGG | 0.569808 | tig0026950:+6813 | Msa1432090:CDS |
TACACCAGTAAAGGGAGCAA+AGG | 0.570161 | tig0026950:-6590 | None:intergenic |
ATCAGTGGTTATGGAGAGTG+GGG | 0.575873 | tig0026950:-6722 | None:intergenic |
CTAACCTTCCCATTGCTGAT+GGG | 0.576542 | tig0026950:-7759 | None:intergenic |
AAATTTGCCGGTGGGAACGA+AGG | 0.578586 | tig0026950:-6195 | None:intergenic |
GCCCAGAAAACATTGGTGAT+GGG | 0.579481 | tig0026950:-6481 | None:intergenic |
TGCACGATTCTTCTGCCAAG+TGG | 0.580316 | tig0026950:+6110 | Msa1432090:CDS |
ACATTCCGCTTGCAGGCACT+GGG | 0.581089 | tig0026950:+6990 | Msa1432090:CDS |
ATTGAGGACCCCATCTCCGA+TGG | 0.581233 | tig0026950:+7212 | Msa1432090:CDS |
CCACGAACAGTCACAAGGGT+TGG | 0.582221 | tig0026950:+6061 | Msa1432090:CDS |
ATCATATCTGTCTAAAAGTG+TGG | 0.585384 | tig0026950:-6938 | None:intergenic |
TTTACTGGTGTAAACCATCA+TGG | 0.586662 | tig0026950:+6601 | Msa1432090:CDS |
ATGAAAGACGGCCTCTGAGG+AGG | 0.589614 | tig0026950:+12132 | Msa1432090:exon |
TGCAACATCATAAGTTTCAG+GGG | 0.590648 | tig0026950:-7673 | None:intergenic |
CTTCAAAGTTTGGGAACTGG+AGG | 0.598863 | tig0026950:-6855 | None:intergenic |
AGATGGAAGAGTAAGGACAT+TGG | 0.600676 | tig0026950:-7493 | None:intergenic |
CGTTTGAGTATATAATGAGA+TGG | 0.602082 | tig0026950:-7510 | None:intergenic |
CGCAGGTAATGCGAAAGGAG+GGG | 0.602168 | tig0026950:+7730 | Msa1432090:CDS |
AACTCCCATCAGCAATGGGA+AGG | 0.604290 | tig0026950:+7755 | Msa1432090:CDS |
AAACAGAGAGCAAGTTAGAC+CGG | 0.606350 | tig0026950:-12047 | None:intergenic |
CAACCCTTGTGACTGTTCGT+GGG | 0.608141 | tig0026950:-6060 | None:intergenic |
TGCGCAGGTAATGCGAAAGG+AGG | 0.609788 | tig0026950:+7728 | Msa1432090:CDS |
TTGCCTCTCCATCGGAGATG+GGG | 0.612305 | tig0026950:-7220 | None:intergenic |
CAGATCCAGAAATTTGCCGG+TGG | 0.612578 | tig0026950:-6204 | None:intergenic |
TGTGGTTTGGATGGAGAACG+AGG | 0.614308 | tig0026950:+5658 | Msa1432090:exon |
TTTAGACAGATATGATCTCA+GGG | 0.617719 | tig0026950:+6945 | Msa1432090:CDS |
AACGCCCACGAACAGTCACA+AGG | 0.617810 | tig0026950:+6056 | Msa1432090:CDS |
AATCATGCTAATTACACTAG+TGG | 0.620695 | tig0026950:+7804 | Msa1432090:CDS |
CTCAACTTTATAAAGGATGG+GGG | 0.621549 | tig0026950:-12310 | None:intergenic |
ATCCAAAGCTGAGGATGATG+GGG | 0.622295 | tig0026950:+7317 | Msa1432090:CDS |
AGATCCAGAAATTTGCCGGT+GGG | 0.622920 | tig0026950:-6203 | None:intergenic |
TATGGAATTCGAGTCTGAAG+AGG | 0.624053 | tig0026950:+5865 | Msa1432090:CDS |
CTTGGGAGAGCATATGAATG+AGG | 0.624492 | tig0026950:+7842 | Msa1432090:CDS |
CAAATTTAAAGGCTTCATGT+CGG | 0.625446 | tig0026950:-7632 | None:intergenic |
CAGCAAGGTTGGCTTTACTG+AGG | 0.625913 | tig0026950:+6312 | Msa1432090:CDS |
CAGTGGTTATGGAGAGTGGG+GGG | 0.627461 | tig0026950:-6720 | None:intergenic |
TGTGTTGAAAAGCCAGACAA+AGG | 0.628839 | tig0026950:-6674 | None:intergenic |
TCGAATTCCATACCCTCAGA+AGG | 0.628976 | tig0026950:-5854 | None:intergenic |
GGACCCCATCTCCGATGGAG+AGG | 0.629360 | tig0026950:+7217 | Msa1432090:CDS |
ATTAAGATAAGCATGAAAGA+CGG | 0.631649 | tig0026950:+12120 | Msa1432090:CDS |
AGGCAGTGAACCTGATCGGG+TGG | 0.632274 | tig0026950:-6175 | None:intergenic |
AGGTACCCAGTGCCTGCAAG+CGG | 0.638903 | tig0026950:-6995 | None:intergenic |
TTTGGGAGGAGAATATGAGG+AGG | 0.639911 | tig0026950:+5700 | Msa1432090:CDS |
CAAAGCTGAGGATGATGGGG+AGG | 0.640907 | tig0026950:+7320 | Msa1432090:CDS |
GGGGTCAGCCCAGAAAACAT+TGG | 0.643984 | tig0026950:-6488 | None:intergenic |
ATGAATAATGAACTGAAGTG+AGG | 0.645021 | tig0026950:+5619 | Msa1432090:five_prime_UTR |
GGAGATCTGGAACCTTCTGA+GGG | 0.646337 | tig0026950:+5842 | Msa1432090:CDS |
TGGGAATACTTGCATTATAG+CGG | 0.646366 | tig0026950:-6764 | None:intergenic |
GCATATTGAGATGATGGACG+AGG | 0.650585 | tig0026950:+5730 | Msa1432090:CDS |
TGAAACTTATGATGTTGCAA+AGG | 0.650987 | tig0026950:+7677 | Msa1432090:CDS |
AGCATGAAAGACGGCCTCTG+AGG | 0.655501 | tig0026950:+12129 | Msa1432090:CDS |
TTGATTGTAGGAATTACATG+AGG | 0.657971 | tig0026950:+6335 | Msa1432090:CDS |
AGTTGCGCAGGTAATGCGAA+AGG | 0.657991 | tig0026950:+7725 | Msa1432090:CDS |
AATGACAGAATCGTGATCAG+TGG | 0.660094 | tig0026950:-6737 | None:intergenic |
TCATGTAGCTAAATTTGGAG+AGG | 0.661413 | tig0026950:+7353 | Msa1432090:CDS |
TCAGTGGTTATGGAGAGTGG+GGG | 0.663708 | tig0026950:-6721 | None:intergenic |
ATTCATGGCATCCAAAGCTG+AGG | 0.668434 | tig0026950:+7308 | Msa1432090:CDS |
GAAGCCAGATACGATCCACT+TGG | 0.669193 | tig0026950:-6125 | None:intergenic |
TCGTCCATCATCTCAATATG+CGG | 0.670750 | tig0026950:-5728 | None:intergenic |
TCAAGGTGATCTTGATGACG+AGG | 0.673752 | tig0026950:+6453 | Msa1432090:CDS |
AGAGTATGGTGGTATCAGCA+AGG | 0.675333 | tig0026950:+6297 | Msa1432090:CDS |
TCCATCATCTCAATATGCGG+CGG | 0.677985 | tig0026950:-5725 | None:intergenic |
GTAATCGATACCTGTTAGAG+CGG | 0.683465 | tig0026950:-6567 | None:intergenic |
GCACTCATCAAAGAGTATGG+TGG | 0.683994 | tig0026950:+6286 | Msa1432090:CDS |
CAATGAGAAAGAAGTAAGAG+CGG | 0.684122 | tig0026950:+7161 | Msa1432090:CDS |
GATGATTTGGGAGAAAGCAG+CGG | 0.686560 | tig0026950:+5791 | Msa1432090:CDS |
TGTAATTCAACCTTGCCTTG+GGG | 0.693919 | tig0026950:-6507 | None:intergenic |
ACGCCCACGAACAGTCACAA+GGG | 0.715179 | tig0026950:+6057 | Msa1432090:CDS |
ACTCCCACAATCCTCCTCAG+AGG | 0.731695 | tig0026950:-12143 | None:intergenic |
GGTTTGGATGGAGAACGAGG+TGG | 0.749123 | tig0026950:+5661 | Msa1432090:exon |
TCTGAATGATAGCTCCGTCG+CGG | 0.754566 | tig0026950:-5964 | None:intergenic |
AGTGCAGACATAATTCTGCG+AGG | 0.756220 | tig0026950:-6268 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATAAAAAAAAAAAAAAA+TGG | - | tig0026950:11100-11119 | None:intergenic | 0.0% |
!!! | ATTTTTTTTTTTTTTTATAT+TGG | + | tig0026950:11099-11118 | Msa1432090:intron | 0.0% |
!!! | AATATTTTATTTACATCAAT+TGG | + | tig0026950:8891-8910 | Msa1432090:intron | 10.0% |
!! | TTAGAAGAAAAAAAAAAATA+GGG | - | tig0026950:10430-10449 | None:intergenic | 10.0% |
!! | ATTAGAAGAAAAAAAAAAAT+AGG | - | tig0026950:10431-10450 | None:intergenic | 10.0% |
!!! | ATTACTTTTAAATGATATTT+TGG | - | tig0026950:10533-10552 | None:intergenic | 10.0% |
!!! | TAAAATACATTTAAAATACG+AGG | - | tig0026950:8116-8135 | None:intergenic | 15.0% |
!! | TATGATGATTATATATTAGT+AGG | - | tig0026950:8564-8583 | None:intergenic | 15.0% |
!!! | ATTTTATTTGTACATATTCA+GGG | + | tig0026950:8770-8789 | Msa1432090:intron | 15.0% |
!! | ATTGTATCAAAATCAATATT+TGG | - | tig0026950:8857-8876 | None:intergenic | 15.0% |
!! | AAACCATATAATTCTAATTT+GGG | - | tig0026950:9619-9638 | None:intergenic | 15.0% |
!! | AAAACCATATAATTCTAATT+TGG | - | tig0026950:9620-9639 | None:intergenic | 15.0% |
!!! | ATATGGTTTTGAATTAATTA+AGG | + | tig0026950:9630-9649 | Msa1432090:intron | 15.0% |
!!! | ACATTTTGTGTTTTAATATT+GGG | + | tig0026950:9779-9798 | Msa1432090:intron | 15.0% |
!!! | TATACCAATAAAACTATTTT+GGG | - | tig0026950:11265-11284 | None:intergenic | 15.0% |
!!! | ATATACCAATAAAACTATTT+TGG | - | tig0026950:11266-11285 | None:intergenic | 15.0% |
!!! | GTTTTTTTTTTTTGTTACAA+CGG | + | tig0026950:11363-11382 | Msa1432090:intron | 15.0% |
!! | ATAGCTTATTATATTTAACT+AGG | + | tig0026950:11465-11484 | Msa1432090:intron | 15.0% |
!! | AATGTTGAATAATAATGATA+TGG | + | tig0026950:11726-11745 | Msa1432090:intron | 15.0% |
!!! | TTTTGTCTAATAGATTATAT+CGG | + | tig0026950:11871-11890 | Msa1432090:intron | 15.0% |
!!! | AAAGAAGAAATTAGGATTTT+GGG | - | tig0026950:6428-6447 | None:intergenic | 20.0% |
!! | TCATGTATATACTTACTATT+TGG | + | tig0026950:7581-7600 | Msa1432090:CDS | 20.0% |
!! | ACCTTTATCAACAAATTTAA+AGG | - | tig0026950:7646-7665 | None:intergenic | 20.0% |
!!! | TTATTGGTTTAAATCATTGT+GGG | + | tig0026950:7980-7999 | Msa1432090:intron | 20.0% |
!!! | CATTTTATTTGTACATATTC+AGG | + | tig0026950:8769-8788 | Msa1432090:intron | 20.0% |
!!! | TTTTATTTGTACATATTCAG+GGG | + | tig0026950:8771-8790 | Msa1432090:intron | 20.0% |
!! | TAAGGAATTTATCTTTCAAA+AGG | - | tig0026950:9093-9112 | None:intergenic | 20.0% |
!!! | TTAGTTTTCTTTTTTCTCTT+AGG | + | tig0026950:9535-9554 | Msa1432090:intron | 20.0% |
!!! | CACATTTTGTGTTTTAATAT+TGG | + | tig0026950:9778-9797 | Msa1432090:intron | 20.0% |
!!! | AATGTTGTTAATGATGTTTT+TGG | - | tig0026950:10165-10184 | None:intergenic | 20.0% |
!! | TAAGAAAATAAATCAGATTG+AGG | - | tig0026950:10338-10357 | None:intergenic | 20.0% |
!!! | AATCTGATTTATTTTCTTAC+TGG | + | tig0026950:10339-10358 | Msa1432090:intron | 20.0% |
!!! | ATCTGATTTATTTTCTTACT+GGG | + | tig0026950:10340-10359 | Msa1432090:intron | 20.0% |
!! | AAGTAATGTGAACTAATATT+TGG | + | tig0026950:10546-10565 | Msa1432090:intron | 20.0% |
!! | TTAATTTAATACCCATTGAT+TGG | + | tig0026950:10745-10764 | Msa1432090:intron | 20.0% |
!!! | ACGTTTTAAAAAAATTCACT+AGG | - | tig0026950:11180-11199 | None:intergenic | 20.0% |
!! | AAAAATGTTGAGTATTTGAA+CGG | + | tig0026950:11333-11352 | Msa1432090:intron | 20.0% |
!! | TACAAAAACTAAACAAAATG+GGG | - | tig0026950:12251-12270 | None:intergenic | 20.0% |
!! | CTACAAAAACTAAACAAAAT+GGG | - | tig0026950:12252-12271 | None:intergenic | 20.0% |
!! | TCTACAAAAACTAAACAAAA+TGG | - | tig0026950:12253-12272 | None:intergenic | 20.0% |
!! | AGATTATCTCAACTTTATAA+AGG | - | tig0026950:12320-12339 | None:intergenic | 20.0% |
!!! | GTAGAATTTGATATTGGTTT+GGG | + | tig0026950:5683-5702 | Msa1432090:CDS | 25.0% |
!! | CAAAGAAGAAATTAGGATTT+TGG | - | tig0026950:6429-6448 | None:intergenic | 25.0% |
!!! | AGGTTGAATTACACTTTTTT+CGG | + | tig0026950:6517-6536 | Msa1432090:CDS | 25.0% |
!! | CTTAAAGAACTGATTTAAAC+TGG | - | tig0026950:7115-7134 | None:intergenic | 25.0% |
!! | AATTTTTCTTGTGTAAAGCT+CGG | - | tig0026950:7250-7269 | None:intergenic | 25.0% |
! | ACATATCATGTAGCTAAATT+TGG | + | tig0026950:7348-7367 | Msa1432090:CDS | 25.0% |
!!! | GCCTTTAAATTTGTTGATAA+AGG | + | tig0026950:7642-7661 | Msa1432090:CDS | 25.0% |
! | TTTATTACTCACTCTCTTAT+TGG | + | tig0026950:7964-7983 | Msa1432090:intron | 25.0% |
!!! | CTTATTGGTTTAAATCATTG+TGG | + | tig0026950:7979-7998 | Msa1432090:intron | 25.0% |
!!! | TCATCTTTTAAGAACCAAAT+TGG | + | tig0026950:9004-9023 | Msa1432090:intron | 25.0% |
!! | TTTCATTGATTGAACAAAGT+TGG | + | tig0026950:9067-9086 | Msa1432090:intron | 25.0% |
! | TCACCCAAATTAGAATTATA+TGG | + | tig0026950:9613-9632 | Msa1432090:intron | 25.0% |
!! | TATTTTTCTTTATGCCCTAA+GGG | - | tig0026950:9698-9717 | None:intergenic | 25.0% |
!! | ATATTTTTCTTTATGCCCTA+AGG | - | tig0026950:9699-9718 | None:intergenic | 25.0% |
! | AGAATATTATGATAGATGAG+TGG | - | tig0026950:10488-10507 | None:intergenic | 25.0% |
!! | CATTTTACAAATGTATGCTT+CGG | - | tig0026950:10596-10615 | None:intergenic | 25.0% |
! | TGGAAAGAATAACTCTATAA+AGG | - | tig0026950:10697-10716 | None:intergenic | 25.0% |
!! | AAATTAGGGTTAGTGTAAAT+TGG | + | tig0026950:11063-11082 | Msa1432090:intron | 25.0% |
!! | AATTAGGGTTAGTGTAAATT+GGG | + | tig0026950:11064-11083 | Msa1432090:intron | 25.0% |
!!! | TACTCCCAAAATAGTTTTAT+TGG | + | tig0026950:11258-11277 | Msa1432090:intron | 25.0% |
! | TAATAATGATATGGAAAGAG+AGG | + | tig0026950:11735-11754 | Msa1432090:intron | 25.0% |
! | AATAATGATATGGAAAGAGA+GGG | + | tig0026950:11736-11755 | Msa1432090:intron | 25.0% |
! | CTTAATATCTAATATCTTGC+AGG | + | tig0026950:11954-11973 | Msa1432090:intron | 25.0% |
! | ATTAAGATAAGCATGAAAGA+CGG | + | tig0026950:12120-12139 | Msa1432090:CDS | 25.0% |
! | ATCTCAACTTTATAAAGGAT+GGG | - | tig0026950:12315-12334 | None:intergenic | 25.0% |
! | TATCTCAACTTTATAAAGGA+TGG | - | tig0026950:12316-12335 | None:intergenic | 25.0% |
ATGAATAATGAACTGAAGTG+AGG | + | tig0026950:5619-5638 | Msa1432090:five_prime_UTR | 30.0% | |
GGTATTTGTTTGTTTGTTTG+TGG | + | tig0026950:5640-5659 | Msa1432090:five_prime_UTR | 30.0% | |
TTGTTTGTTTGTTTGTGGTT+TGG | + | tig0026950:5645-5664 | Msa1432090:five_prime_UTR | 30.0% | |
! | GGTAGAATTTGATATTGGTT+TGG | + | tig0026950:5682-5701 | Msa1432090:CDS | 30.0% |
AGAAGAAGAAGATGATGATT+TGG | + | tig0026950:5778-5797 | Msa1432090:CDS | 30.0% | |
GAAGAAGAAGATGATGATTT+GGG | + | tig0026950:5779-5798 | Msa1432090:CDS | 30.0% | |
TTGATTGTAGGAATTACATG+AGG | + | tig0026950:6335-6354 | Msa1432090:CDS | 30.0% | |
AATCGCCATAAAAGTTTACA+AGG | + | tig0026950:6361-6380 | Msa1432090:CDS | 30.0% | |
TGAACAGCAAAGAAGAAATT+AGG | - | tig0026950:6436-6455 | None:intergenic | 30.0% | |
!! | AATTTCTTCTTTGCTGTTCA+AGG | + | tig0026950:6436-6455 | Msa1432090:CDS | 30.0% |
GTTAACACATTTGTGAAACT+CGG | - | tig0026950:6881-6900 | None:intergenic | 30.0% | |
ATCATATCTGTCTAAAAGTG+TGG | - | tig0026950:6941-6960 | None:intergenic | 30.0% | |
! | TTTTAGACAGATATGATCTC+AGG | + | tig0026950:6944-6963 | Msa1432090:CDS | 30.0% |
TTTAGACAGATATGATCTCA+GGG | + | tig0026950:6945-6964 | Msa1432090:CDS | 30.0% | |
TATAATGAGATGGAAGAGTA+AGG | - | tig0026950:7503-7522 | None:intergenic | 30.0% | |
CGTTTGAGTATATAATGAGA+TGG | - | tig0026950:7513-7532 | None:intergenic | 30.0% | |
CAAATTTAAAGGCTTCATGT+CGG | - | tig0026950:7635-7654 | None:intergenic | 30.0% | |
TTGCAACATCATAAGTTTCA+GGG | - | tig0026950:7677-7696 | None:intergenic | 30.0% | |
TTTGCAACATCATAAGTTTC+AGG | - | tig0026950:7678-7697 | None:intergenic | 30.0% | |
TGAAACTTATGATGTTGCAA+AGG | + | tig0026950:7677-7696 | Msa1432090:CDS | 30.0% | |
AATCATGCTAATTACACTAG+TGG | + | tig0026950:7804-7823 | Msa1432090:CDS | 30.0% | |
GGTTAAAAACAACCGTAAAA+TGG | - | tig0026950:7876-7895 | None:intergenic | 30.0% | |
TATATCTCTATTCTCTAGCA+TGG | - | tig0026950:8151-8170 | None:intergenic | 30.0% | |
CAACTTTATTGGAAGAATGA+TGG | - | tig0026950:8292-8311 | None:intergenic | 30.0% | |
GCACTGAAATTCAACTTTAT+TGG | - | tig0026950:8303-8322 | None:intergenic | 30.0% | |
CAACAAAAATGAAGGTCAAA+GGG | - | tig0026950:8506-8525 | None:intergenic | 30.0% | |
TCAACAAAAATGAAGGTCAA+AGG | - | tig0026950:8507-8526 | None:intergenic | 30.0% | |
ATAGCACTCAACAAAAATGA+AGG | - | tig0026950:8514-8533 | None:intergenic | 30.0% | |
TAAAACCATAGACATGTAGA+AGG | - | tig0026950:8598-8617 | None:intergenic | 30.0% | |
ACAAGACTCATAACTCAAAA+TGG | - | tig0026950:8638-8657 | None:intergenic | 30.0% | |
GATCGAACTTATCATCAATT+AGG | + | tig0026950:8957-8976 | Msa1432090:intron | 30.0% | |
TCAGTTAGAACCTTAATGTT+TGG | + | tig0026950:9304-9323 | Msa1432090:intron | 30.0% | |
CAGTTAGAACCTTAATGTTT+GGG | + | tig0026950:9305-9324 | Msa1432090:intron | 30.0% | |
! | TTTTATGTTCTCCGTTAACT+CGG | + | tig0026950:9420-9439 | Msa1432090:intron | 30.0% |
ACATCAAAATGTGAAGTTCT+TGG | - | tig0026950:9466-9485 | None:intergenic | 30.0% | |
! | ATTTGCAATGTTTTTCCCTT+AGG | + | tig0026950:9680-9699 | Msa1432090:intron | 30.0% |
! | TTTGCAATGTTTTTCCCTTA+GGG | + | tig0026950:9681-9700 | Msa1432090:intron | 30.0% |
! | AGCACAAATGCACAAAATTT+TGG | + | tig0026950:9894-9913 | Msa1432090:intron | 30.0% |
! | ACAAATGCACAAAATTTTGG+TGG | + | tig0026950:9897-9916 | Msa1432090:intron | 30.0% |
ATATGGAGACAAGAAAAAAC+AGG | + | tig0026950:9935-9954 | Msa1432090:intron | 30.0% | |
TATGGAGACAAGAAAAAACA+GGG | + | tig0026950:9936-9955 | Msa1432090:intron | 30.0% | |
ATACTTCAGTGACTTAGAAA+TGG | - | tig0026950:10109-10128 | None:intergenic | 30.0% | |
!!! | ATTTGACACTGCTGTTTTTT+GGG | - | tig0026950:10134-10153 | None:intergenic | 30.0% |
CCAAACTATTAAAAGAGGTT+TGG | - | tig0026950:10293-10312 | None:intergenic | 30.0% | |
! | CCAAACCTCTTTTAATAGTT+TGG | + | tig0026950:10290-10309 | Msa1432090:intron | 30.0% |
TCAAGCCAAACTATTAAAAG+AGG | - | tig0026950:10298-10317 | None:intergenic | 30.0% | |
!!! | GTTTGGCTTGAAGTTTTATT+TGG | + | tig0026950:10307-10326 | Msa1432090:intron | 30.0% |
! | GTTCTACATTCTTTTCTACT+AGG | + | tig0026950:10398-10417 | Msa1432090:intron | 30.0% |
TCAGACAATATCCAATCAAT+GGG | - | tig0026950:10759-10778 | None:intergenic | 30.0% | |
ACATAGTAACATAATTCGCT+GGG | + | tig0026950:10780-10799 | Msa1432090:intron | 30.0% | |
ATGAGGAAGATGATGAAATT+AGG | + | tig0026950:11048-11067 | Msa1432090:intron | 30.0% | |
TGAGGAAGATGATGAAATTA+GGG | + | tig0026950:11049-11068 | Msa1432090:intron | 30.0% | |
ATGTTTAGCAATTCAGCATT+GGG | - | tig0026950:11141-11160 | None:intergenic | 30.0% | |
TATGTTTAGCAATTCAGCAT+TGG | - | tig0026950:11142-11161 | None:intergenic | 30.0% | |
AATCGTGAATTATGTGACTA+TGG | + | tig0026950:11592-11611 | Msa1432090:intron | 30.0% | |
!!! | ATATTTGTGAAAGCGCTTTT+TGG | - | tig0026950:11677-11696 | None:intergenic | 30.0% |
! | ATTTTGTTCTTACGTGCATT+TGG | + | tig0026950:11697-11716 | Msa1432090:intron | 30.0% |
TAATATCTTGCAGGATGATA+TGG | + | tig0026950:11963-11982 | Msa1432090:intron | 30.0% | |
TAAGCATATCACGAAACTTA+CGG | + | tig0026950:11987-12006 | Msa1432090:CDS | 30.0% | |
ATAGGAAATGTGAAATGTAC+CGG | + | tig0026950:12028-12047 | Msa1432090:CDS | 30.0% | |
AACAAAATGGGGTTATTCAT+AGG | - | tig0026950:12240-12259 | None:intergenic | 30.0% | |
TCTCAACTTTATAAAGGATG+GGG | - | tig0026950:12314-12333 | None:intergenic | 30.0% | |
! | TTGTTTGTTTGTGGTTTGGA+TGG | + | tig0026950:5649-5668 | Msa1432090:exon | 35.0% |
GAGGTGGTAGAATTTGATAT+TGG | + | tig0026950:5677-5696 | Msa1432090:CDS | 35.0% | |
!! | GAATTTGATATTGGTTTGGG+AGG | + | tig0026950:5686-5705 | Msa1432090:CDS | 35.0% |
AATTCGTTTGTGCTAAGGAA+GGG | + | tig0026950:5990-6009 | Msa1432090:CDS | 35.0% | |
!! | GTGCATTTTGACAGATAAAG+AGG | - | tig0026950:6095-6114 | None:intergenic | 35.0% |
AACCCTAATTGACACTTTAC+AGG | + | tig0026950:6231-6250 | Msa1432090:CDS | 35.0% | |
! | AGCCTGTAAAGTGTCAATTA+GGG | - | tig0026950:6236-6255 | None:intergenic | 35.0% |
! | TGTCGCCTTGTAAACTTTTA+TGG | - | tig0026950:6369-6388 | None:intergenic | 35.0% |
TGATGGTTTACACCAGTAAA+GGG | - | tig0026950:6601-6620 | None:intergenic | 35.0% | |
ATGATGGTTTACACCAGTAA+AGG | - | tig0026950:6602-6621 | None:intergenic | 35.0% | |
TTTACTGGTGTAAACCATCA+TGG | + | tig0026950:6601-6620 | Msa1432090:CDS | 35.0% | |
TGGGAATACTTGCATTATAG+CGG | - | tig0026950:6767-6786 | None:intergenic | 35.0% | |
! | AGATATGCCACTTGCAAAAA+CGG | - | tig0026950:6801-6820 | None:intergenic | 35.0% |
AATGTGTCTCGCAAATATAC+AGG | - | tig0026950:7018-7037 | None:intergenic | 35.0% | |
AGCATGAACTCTTACTTTGA+TGG | + | tig0026950:7072-7091 | Msa1432090:CDS | 35.0% | |
CAATGAGAAAGAAGTAAGAG+CGG | + | tig0026950:7161-7180 | Msa1432090:CDS | 35.0% | |
TGAATACTTTGCCAGTATTG+AGG | + | tig0026950:7196-7215 | Msa1432090:CDS | 35.0% | |
! | AATTTTCACTCGATTCCAAG+AGG | + | tig0026950:7266-7285 | Msa1432090:CDS | 35.0% |
TCATGTAGCTAAATTTGGAG+AGG | + | tig0026950:7353-7372 | Msa1432090:CDS | 35.0% | |
!! | TGCCAAATGTTTGAGTTTTC+AGG | + | tig0026950:7432-7451 | Msa1432090:CDS | 35.0% |
CTCATTATATACTCAAACGC+TGG | + | tig0026950:7514-7533 | Msa1432090:CDS | 35.0% | |
TGCAACATCATAAGTTTCAG+GGG | - | tig0026950:7676-7695 | None:intergenic | 35.0% | |
! | GAGGTCAGAATTCCATTTTA+CGG | + | tig0026950:7861-7880 | Msa1432090:intron | 35.0% |
! | GTTTTTAACCTGTTCTACGA+TGG | + | tig0026950:7886-7905 | Msa1432090:intron | 35.0% |
AAAATTGAACCTCCACAAAG+TGG | + | tig0026950:8014-8033 | Msa1432090:intron | 35.0% | |
TCTAACACTCACTCGTTTAT+TGG | - | tig0026950:8061-8080 | None:intergenic | 35.0% | |
AATCTTCACCAAATAGCTTG+CGG | + | tig0026950:8183-8202 | Msa1432090:intron | 35.0% | |
TTAGAGCCTCTATGATAAAG+TGG | + | tig0026950:8235-8254 | Msa1432090:intron | 35.0% | |
TGCTAACCACTTTATCATAG+AGG | - | tig0026950:8244-8263 | None:intergenic | 35.0% | |
CTTTATTGGAAGAATGATGG+TGG | - | tig0026950:8289-8308 | None:intergenic | 35.0% | |
AAGTTGAATTTCAGTGCACA+AGG | + | tig0026950:8306-8325 | Msa1432090:intron | 35.0% | |
AAACCTTTAGACTTGATGTG+TGG | - | tig0026950:8353-8372 | None:intergenic | 35.0% | |
! | CATCAAGTCTAAAGGTTTTG+TGG | + | tig0026950:8355-8374 | Msa1432090:intron | 35.0% |
!! | TCTAAAGGTTTTGTGGATGA+GGG | + | tig0026950:8362-8381 | Msa1432090:intron | 35.0% |
TACTTTCAGTTGTACAGCTT+AGG | + | tig0026950:8413-8432 | Msa1432090:intron | 35.0% | |
CTTACCTTGAGAGCTAAAAA+GGG | - | tig0026950:8454-8473 | None:intergenic | 35.0% | |
GACTCATAACTCAAAATGGT+TGG | - | tig0026950:8634-8653 | None:intergenic | 35.0% | |
GTGTTGAATGAGTGTTTCAT+AGG | - | tig0026950:8701-8720 | None:intergenic | 35.0% | |
! | GAGTAACTAGCTTCTCAATT+GGG | - | tig0026950:8750-8769 | None:intergenic | 35.0% |
! | TGAGTAACTAGCTTCTCAAT+TGG | - | tig0026950:8751-8770 | None:intergenic | 35.0% |
GCTTGAAGTACACATCAATT+TGG | + | tig0026950:8913-8932 | Msa1432090:intron | 35.0% | |
ATGATAAGTTCGATCTTCAG+AGG | - | tig0026950:8952-8971 | None:intergenic | 35.0% | |
TTCCTTATCCATTATCCCTT+AGG | + | tig0026950:9106-9125 | Msa1432090:intron | 35.0% | |
AAGTTCGTTAGAGGGAAAAA+TGG | + | tig0026950:9186-9205 | Msa1432090:intron | 35.0% | |
AGTTCGTTAGAGGGAAAAAT+GGG | + | tig0026950:9187-9206 | Msa1432090:intron | 35.0% | |
AGAAAATGTGCAATTCCAGA+TGG | + | tig0026950:9262-9281 | Msa1432090:intron | 35.0% | |
! | TGATCTAAGATAACTCCATC+TGG | - | tig0026950:9280-9299 | None:intergenic | 35.0% |
TTCTCTGTACCCAAACATTA+AGG | - | tig0026950:9317-9336 | None:intergenic | 35.0% | |
AAATGTGAAGTTCTTGGTCA+GGG | - | tig0026950:9460-9479 | None:intergenic | 35.0% | |
AAAATGTGAAGTTCTTGGTC+AGG | - | tig0026950:9461-9480 | None:intergenic | 35.0% | |
ATTAAGGATGCATACTGTGT+TGG | + | tig0026950:9646-9665 | Msa1432090:intron | 35.0% | |
TTAAGGATGCATACTGTGTT+GGG | + | tig0026950:9647-9666 | Msa1432090:intron | 35.0% | |
!! | ACTGAATTGACTTGTAGATG+TGG | + | tig0026950:9821-9840 | Msa1432090:intron | 35.0% |
! | ATGTGGTATGTTGTGGATTT+TGG | + | tig0026950:9838-9857 | Msa1432090:intron | 35.0% |
ATGGAGACAAGAAAAAACAG+GGG | + | tig0026950:9937-9956 | Msa1432090:intron | 35.0% | |
!!! | CATTTGACACTGCTGTTTTT+TGG | - | tig0026950:10135-10154 | None:intergenic | 35.0% |
GTGGTTATGCAAGACAATAT+AGG | - | tig0026950:10469-10488 | None:intergenic | 35.0% | |
! | TTTTCTTGCTTTACTGAAGC+TGG | + | tig0026950:10642-10661 | Msa1432090:intron | 35.0% |
! | TAAGCACATCATGATGATGA+TGG | - | tig0026950:10717-10736 | None:intergenic | 35.0% |
GTCAGACAATATCCAATCAA+TGG | - | tig0026950:10760-10779 | None:intergenic | 35.0% | |
CACATAGTAACATAATTCGC+TGG | + | tig0026950:10779-10798 | Msa1432090:intron | 35.0% | |
GAAGAAACAGAAACTGGATT+TGG | + | tig0026950:11007-11026 | Msa1432090:intron | 35.0% | |
TAGTGTAAATTGGGCTTATC+TGG | + | tig0026950:11073-11092 | Msa1432090:intron | 35.0% | |
AGTGTAAATTGGGCTTATCT+GGG | + | tig0026950:11074-11093 | Msa1432090:intron | 35.0% | |
GACACGCAGAATATATTAGA+AGG | - | tig0026950:11767-11786 | None:intergenic | 35.0% | |
! | AGAAATGAGAGAAAGCACAT+GGG | - | tig0026950:11825-11844 | None:intergenic | 35.0% |
! | AAGAAATGAGAGAAAGCACA+TGG | - | tig0026950:11826-11845 | None:intergenic | 35.0% |
CAAGTTAGAGTTGTCAGTAA+AGG | + | tig0026950:12089-12108 | Msa1432090:CDS | 35.0% | |
CTCAACTTTATAAAGGATGG+GGG | - | tig0026950:12313-12332 | None:intergenic | 35.0% | |
TCGTCCATCATCTCAATATG+CGG | - | tig0026950:5731-5750 | None:intergenic | 40.0% | |
TATGGAATTCGAGTCTGAAG+AGG | + | tig0026950:5865-5884 | Msa1432090:CDS | 40.0% | |
GAGACAATTCGTTTGTGCTA+AGG | + | tig0026950:5985-6004 | Msa1432090:CDS | 40.0% | |
CAATTCGTTTGTGCTAAGGA+AGG | + | tig0026950:5989-6008 | Msa1432090:CDS | 40.0% | |
TTGCAGATCCAGAAATTTGC+CGG | - | tig0026950:6210-6229 | None:intergenic | 40.0% | |
! | CAGCCTGTAAAGTGTCAATT+AGG | - | tig0026950:6237-6256 | None:intergenic | 40.0% |
TCTGCACTCATCAAAGAGTA+TGG | + | tig0026950:6283-6302 | Msa1432090:CDS | 40.0% | |
! | GCTTTACTGAGGTTGATTGT+AGG | + | tig0026950:6323-6342 | Msa1432090:CDS | 40.0% |
! | ATCCCATCACCAATGTTTTC+TGG | + | tig0026950:6479-6498 | Msa1432090:CDS | 40.0% |
! | TCCCATCACCAATGTTTTCT+GGG | + | tig0026950:6480-6499 | Msa1432090:CDS | 40.0% |
TGTAATTCAACCTTGCCTTG+GGG | - | tig0026950:6510-6529 | None:intergenic | 40.0% | |
GTGTAATTCAACCTTGCCTT+GGG | - | tig0026950:6511-6530 | None:intergenic | 40.0% | |
AGTGTAATTCAACCTTGCCT+TGG | - | tig0026950:6512-6531 | None:intergenic | 40.0% | |
GTAATCGATACCTGTTAGAG+CGG | - | tig0026950:6570-6589 | None:intergenic | 40.0% | |
AAAGCACAACCAAAGAGAAC+AGG | - | tig0026950:6631-6650 | None:intergenic | 40.0% | |
AAACTGAAGCTTCCTTTGTC+TGG | + | tig0026950:6662-6681 | Msa1432090:CDS | 40.0% | |
TGTGTTGAAAAGCCAGACAA+AGG | - | tig0026950:6677-6696 | None:intergenic | 40.0% | |
!!! | TTGTCTGGCTTTTCAACACA+TGG | + | tig0026950:6677-6696 | Msa1432090:CDS | 40.0% |
AGAATCGTGATCAGTGGTTA+TGG | - | tig0026950:6734-6753 | None:intergenic | 40.0% | |
AATGACAGAATCGTGATCAG+TGG | - | tig0026950:6740-6759 | None:intergenic | 40.0% | |
GCATATCTTTAAGCAATGCC+AGG | + | tig0026950:6813-6832 | Msa1432090:CDS | 40.0% | |
AAATGTGAGACAACTTCTCC+TGG | - | tig0026950:6834-6853 | None:intergenic | 40.0% | |
GAAACTCGGCTTCAAAGTTT+GGG | - | tig0026950:6867-6886 | None:intergenic | 40.0% | |
TGAAACTCGGCTTCAAAGTT+TGG | - | tig0026950:6868-6887 | None:intergenic | 40.0% | |
TTGACGAATTTGAGTCTTGC+TGG | + | tig0026950:6914-6933 | Msa1432090:CDS | 40.0% | |
ATGATCTCAGGGACAATGAA+TGG | + | tig0026950:6956-6975 | Msa1432090:CDS | 40.0% | |
GGCCTGAAAACTCAAACATT+TGG | - | tig0026950:7437-7456 | None:intergenic | 40.0% | |
CCAGAATATGTCTGCAAAGA+AGG | - | tig0026950:7458-7477 | None:intergenic | 40.0% | |
CCTTCTTTGCAGACATATTC+TGG | + | tig0026950:7455-7474 | Msa1432090:CDS | 40.0% | |
AGATGGAAGAGTAAGGACAT+TGG | - | tig0026950:7496-7515 | None:intergenic | 40.0% | |
!! | TTGCAAACTGACGTTGCTTT+TGG | - | tig0026950:7550-7569 | None:intergenic | 40.0% |
TAATTACACTAGTGGCTGTC+AGG | + | tig0026950:7812-7831 | Msa1432090:CDS | 40.0% | |
ATAACATGCCATCGTAGAAC+AGG | - | tig0026950:7897-7916 | None:intergenic | 40.0% | |
!! | TTCTCTAGCATGGTGGATTA+AGG | - | tig0026950:8141-8160 | None:intergenic | 40.0% |
ATCTCTATTCTCTAGCATGG+TGG | - | tig0026950:8148-8167 | None:intergenic | 40.0% | |
!!! | GGTAGTTTTGACTTGTGTGT+TGG | + | tig0026950:8327-8346 | Msa1432090:intron | 40.0% |
!! | GTCTAAAGGTTTTGTGGATG+AGG | + | tig0026950:8361-8380 | Msa1432090:intron | 40.0% |
CCTTACCTTGAGAGCTAAAA+AGG | - | tig0026950:8455-8474 | None:intergenic | 40.0% | |
!!! | CCTTTTTAGCTCTCAAGGTA+AGG | + | tig0026950:8452-8471 | Msa1432090:intron | 40.0% |
TGTGTCCTTCTACATGTCTA+TGG | + | tig0026950:8590-8609 | Msa1432090:intron | 40.0% | |
ATCTCAGTGCACTACCAATT+TGG | - | tig0026950:9021-9040 | None:intergenic | 40.0% | |
!! | GACCTAAGGGATAATGGATA+AGG | - | tig0026950:9111-9130 | None:intergenic | 40.0% |
CCATTGGGCTATTCTCTTTA+TGG | - | tig0026950:9147-9166 | None:intergenic | 40.0% | |
CCATAAAGAGAATAGCCCAA+TGG | + | tig0026950:9144-9163 | Msa1432090:intron | 40.0% | |
AATAGCCCAATGGATAGTAG+AGG | + | tig0026950:9154-9173 | Msa1432090:intron | 40.0% | |
ACTCACCTCTACTATCCATT+GGG | - | tig0026950:9162-9181 | None:intergenic | 40.0% | |
AACTCACCTCTACTATCCAT+TGG | - | tig0026950:9163-9182 | None:intergenic | 40.0% | |
AATGGATAGTAGAGGTGAGT+TGG | + | tig0026950:9162-9181 | Msa1432090:intron | 40.0% | |
GGAAAAATGGGAAACACATG+TGG | + | tig0026950:9199-9218 | Msa1432090:intron | 40.0% | |
AGTGATAGGAACCGAGTTAA+CGG | - | tig0026950:9434-9453 | None:intergenic | 40.0% | |
AATGTGAAGTTCTTGGTCAG+GGG | - | tig0026950:9459-9478 | None:intergenic | 40.0% | |
CTTGTAGATGTGGTATGTTG+TGG | + | tig0026950:9831-9850 | Msa1432090:intron | 40.0% | |
GGCAACAATTCAGTGTGATA+TGG | + | tig0026950:9918-9937 | Msa1432090:intron | 40.0% | |
AAAAAACAGGGGTTCCACTT+TGG | + | tig0026950:9948-9967 | Msa1432090:intron | 40.0% | |
!! | TTCCACTTTGGTGCCATTAA+TGG | + | tig0026950:9960-9979 | Msa1432090:intron | 40.0% |
!! | TGACTTAGAAATGGTGCCAT+TGG | - | tig0026950:10100-10119 | None:intergenic | 40.0% |
AGAATGTAGAACCTCGTCTT+TGG | - | tig0026950:10390-10409 | None:intergenic | 40.0% | |
CTCGTTTATACGGATACTCA+CGG | - | tig0026950:10906-10925 | None:intergenic | 40.0% | |
AGAAGAACATGAGAAGAGAG+TGG | + | tig0026950:10979-10998 | Msa1432090:intron | 40.0% | |
GAGAGTGAAGAAACAGAAAC+TGG | + | tig0026950:11001-11020 | Msa1432090:intron | 40.0% | |
AAACAGAAACTGGATTTGGC+TGG | + | tig0026950:11011-11030 | Msa1432090:intron | 40.0% | |
CACGCTACATCAGAAGAATT+CGG | - | tig0026950:11544-11563 | None:intergenic | 40.0% | |
ACATAATTCACGATTCGTCC+TGG | - | tig0026950:11587-11606 | None:intergenic | 40.0% | |
GACTATGGTCTGATAGTTGT+TGG | + | tig0026950:11607-11626 | Msa1432090:intron | 40.0% | |
TTCTTACGTGCATTTGGTTG+AGG | + | tig0026950:11703-11722 | Msa1432090:intron | 40.0% | |
! | GAAATGAGAGAAAGCACATG+GGG | - | tig0026950:11824-11843 | None:intergenic | 40.0% |
ATGAGCTTGAGTGTGCAAAT+AGG | + | tig0026950:12010-12029 | Msa1432090:CDS | 40.0% | |
AAACAGAGAGCAAGTTAGAC+CGG | - | tig0026950:12050-12069 | None:intergenic | 40.0% | |
!!! | CTCTGTTTTGAAAGCTGTTG+AGG | + | tig0026950:12062-12081 | Msa1432090:CDS | 40.0% |
GTTAGAGTTGTCAGTAAAGG+TGG | + | tig0026950:12092-12111 | Msa1432090:CDS | 40.0% | |
! | GGGAGTACATAGAAACAGAT+AGG | + | tig0026950:12160-12179 | Msa1432090:three_prime_UTR | 40.0% |
ACTTTATAAAGGATGGGGGT+GGG | - | tig0026950:12309-12328 | None:intergenic | 40.0% | |
AACTTTATAAAGGATGGGGG+TGG | - | tig0026950:12310-12329 | None:intergenic | 40.0% | |
! | TGGTTTGGGAGGAGAATATG+AGG | + | tig0026950:5697-5716 | Msa1432090:CDS | 45.0% |
TTTGGGAGGAGAATATGAGG+AGG | + | tig0026950:5700-5719 | Msa1432090:CDS | 45.0% | |
TCCATCATCTCAATATGCGG+CGG | - | tig0026950:5728-5747 | None:intergenic | 45.0% | |
!! | GCATATTGAGATGATGGACG+AGG | + | tig0026950:5730-5749 | Msa1432090:CDS | 45.0% |
! | GATGATTTGGGAGAAAGCAG+CGG | + | tig0026950:5791-5810 | Msa1432090:CDS | 45.0% |
TCGAATTCCATACCCTCAGA+AGG | - | tig0026950:5857-5876 | None:intergenic | 45.0% | |
AATTCCTATGCTCGTCGTGT+TGG | + | tig0026950:5905-5924 | Msa1432090:CDS | 45.0% | |
GCGTTTGATCTCTCTGTCTT+TGG | - | tig0026950:6041-6060 | None:intergenic | 45.0% | |
AGATCCAGAAATTTGCCGGT+GGG | - | tig0026950:6206-6225 | None:intergenic | 45.0% | |
ATTGACACTTTACAGGCTGC+TGG | + | tig0026950:6238-6257 | Msa1432090:CDS | 45.0% | |
ACTTTACAGGCTGCTGGTAT+GGG | + | tig0026950:6244-6263 | Msa1432090:CDS | 45.0% | |
AGTGCAGACATAATTCTGCG+AGG | - | tig0026950:6271-6290 | None:intergenic | 45.0% | |
! | GCACTCATCAAAGAGTATGG+TGG | + | tig0026950:6286-6305 | Msa1432090:CDS | 45.0% |
AGAGTATGGTGGTATCAGCA+AGG | + | tig0026950:6297-6316 | Msa1432090:CDS | 45.0% | |
TATGGTGGTATCAGCAAGGT+TGG | + | tig0026950:6301-6320 | Msa1432090:CDS | 45.0% | |
!! | TCAAGGTGATCTTGATGACG+AGG | + | tig0026950:6453-6472 | Msa1432090:CDS | 45.0% |
! | GCCCAGAAAACATTGGTGAT+GGG | - | tig0026950:6484-6503 | None:intergenic | 45.0% |
AGCCCAGAAAACATTGGTGA+TGG | - | tig0026950:6485-6504 | None:intergenic | 45.0% | |
ACACTACTTACCGCTCTAAC+AGG | + | tig0026950:6557-6576 | Msa1432090:CDS | 45.0% | |
TTACCCTTTGCTCCCTTTAC+TGG | + | tig0026950:6586-6605 | Msa1432090:CDS | 45.0% | |
ACACCAGTAAAGGGAGCAAA+GGG | - | tig0026950:6592-6611 | None:intergenic | 45.0% | |
TACACCAGTAAAGGGAGCAA+AGG | - | tig0026950:6593-6612 | None:intergenic | 45.0% | |
! | AGAGAACAGGTTGACCATGA+TGG | - | tig0026950:6618-6637 | None:intergenic | 45.0% |
CATGGTCAACCTGTTCTCTT+TGG | + | tig0026950:6619-6638 | Msa1432090:CDS | 45.0% | |
ATCAGTGGTTATGGAGAGTG+GGG | - | tig0026950:6725-6744 | None:intergenic | 45.0% | |
GATCAGTGGTTATGGAGAGT+GGG | - | tig0026950:6726-6745 | None:intergenic | 45.0% | |
TGATCAGTGGTTATGGAGAG+TGG | - | tig0026950:6727-6746 | None:intergenic | 45.0% | |
AAAAACGGTGACGAGTGTCT+GGG | - | tig0026950:6786-6805 | None:intergenic | 45.0% | |
CTTCAAAGTTTGGGAACTGG+AGG | - | tig0026950:6858-6877 | None:intergenic | 45.0% | |
AAGCAATACATTCCGCTTGC+AGG | + | tig0026950:6983-7002 | Msa1432090:CDS | 45.0% | |
ATTCATGGCATCCAAAGCTG+AGG | + | tig0026950:7308-7327 | Msa1432090:CDS | 45.0% | |
CATCCAAAGCTGAGGATGAT+GGG | + | tig0026950:7316-7335 | Msa1432090:CDS | 45.0% | |
ATCCAAAGCTGAGGATGATG+GGG | + | tig0026950:7317-7336 | Msa1432090:CDS | 45.0% | |
CTAACCTTCCCATTGCTGAT+GGG | - | tig0026950:7762-7781 | None:intergenic | 45.0% | |
! | CTTGGGAGAGCATATGAATG+AGG | + | tig0026950:7842-7861 | Msa1432090:CDS | 45.0% |
ATTGAACCTCCACAAAGTGG+TGG | + | tig0026950:8017-8036 | Msa1432090:intron | 45.0% | |
TTGAACCTCCACAAAGTGGT+GGG | + | tig0026950:8018-8037 | Msa1432090:intron | 45.0% | |
ATGTATGTCCCACCACTTTG+TGG | - | tig0026950:8029-8048 | None:intergenic | 45.0% | |
! | ACCAAATAGCTTGCGGTCTT+AGG | + | tig0026950:8190-8209 | Msa1432090:intron | 45.0% |
TCCTAAGACCGCAAGCTATT+TGG | - | tig0026950:8194-8213 | None:intergenic | 45.0% | |
TGGCCACACATCAAGTCTAA+AGG | + | tig0026950:8347-8366 | Msa1432090:intron | 45.0% | |
!!! | CACACCCTTTTTAGCTCTCA+AGG | + | tig0026950:8447-8466 | Msa1432090:intron | 45.0% |
CAGAGAGACCTAAGGGATAA+TGG | - | tig0026950:9117-9136 | None:intergenic | 45.0% | |
ATCCCTTAGGTCTCTCTGAT+AGG | + | tig0026950:9119-9138 | Msa1432090:intron | 45.0% | |
TCCCTTAGGTCTCTCTGATA+GGG | + | tig0026950:9120-9139 | Msa1432090:intron | 45.0% | |
ACCCTATCAGAGAGACCTAA+GGG | - | tig0026950:9124-9143 | None:intergenic | 45.0% | |
! | TGAGTTGGCAAGTTCGTTAG+AGG | + | tig0026950:9177-9196 | Msa1432090:intron | 45.0% |
GAGTTGGCAAGTTCGTTAGA+GGG | + | tig0026950:9178-9197 | Msa1432090:intron | 45.0% | |
GGGTACAGAGAAATGTCTCT+AGG | + | tig0026950:9325-9344 | Msa1432090:intron | 45.0% | |
! | TCTCTAGGTGCTTTTGCTCT+GGG | + | tig0026950:9340-9359 | Msa1432090:intron | 45.0% |
!!! | TGCTTTTGCTCTGGGATTAC+AGG | + | tig0026950:9348-9367 | Msa1432090:intron | 45.0% |
!!! | GCTTTTGCTCTGGGATTACA+GGG | + | tig0026950:9349-9368 | Msa1432090:intron | 45.0% |
!!! | CTTTTGCTCTGGGATTACAG+GGG | + | tig0026950:9350-9369 | Msa1432090:intron | 45.0% |
TGCCATTAATGGCACCAAAG+TGG | - | tig0026950:9965-9984 | None:intergenic | 45.0% | |
!! | ATGGAATTGGATGGTGCCAT+TGG | - | tig0026950:9988-10007 | None:intergenic | 45.0% |
! | ATGCGTTTTCTTCCCAACGT+GGG | + | tig0026950:10197-10216 | Msa1432090:intron | 45.0% |
CTTGAAACTGATCCCACGTT+GGG | - | tig0026950:10212-10231 | None:intergenic | 45.0% | |
AAATTTCGCCACGAATTGGG+GGG | - | tig0026950:10868-10887 | None:intergenic | 45.0% | |
CAAATTTCGCCACGAATTGG+GGG | - | tig0026950:10869-10888 | None:intergenic | 45.0% | |
GCAAATTTCGCCACGAATTG+GGG | - | tig0026950:10870-10889 | None:intergenic | 45.0% | |
CGCAAATTTCGCCACGAATT+GGG | - | tig0026950:10871-10890 | None:intergenic | 45.0% | |
CCAATTCGTGGCGAAATTTG+CGG | + | tig0026950:10869-10888 | Msa1432090:intron | 45.0% | |
GTATCCGTATAAACGAGCGA+TGG | + | tig0026950:10909-10928 | Msa1432090:intron | 45.0% | |
CTCTCCATCGCTCGTTTATA+CGG | - | tig0026950:10916-10935 | None:intergenic | 45.0% | |
! | AAGGGAGAACTGTGAGTTGA+GGG | + | tig0026950:10938-10957 | Msa1432090:intron | 45.0% |
AAACTGGATTTGGCTGGTAG+CGG | + | tig0026950:11017-11036 | Msa1432090:intron | 45.0% | |
TATAGAGCTTCGGTACGCTT+CGG | - | tig0026950:11509-11528 | None:intergenic | 45.0% | |
AGAAGAATTCGGTACGCATG+GGG | - | tig0026950:11533-11552 | None:intergenic | 45.0% | |
CAGAAGAATTCGGTACGCAT+GGG | - | tig0026950:11534-11553 | None:intergenic | 45.0% | |
TCAGAAGAATTCGGTACGCA+TGG | - | tig0026950:11535-11554 | None:intergenic | 45.0% | |
TTTATAAAGGATGGGGGTGG+GGG | - | tig0026950:12307-12326 | None:intergenic | 45.0% | |
CTTTATAAAGGATGGGGGTG+GGG | - | tig0026950:12308-12327 | None:intergenic | 45.0% | |
!!! | AATATCATAAATTTAAAATA+TGG | - | tig0026950:11900-11919 | None:intergenic | 5.0% |
! | TGTGGTTTGGATGGAGAACG+AGG | + | tig0026950:5658-5677 | Msa1432090:exon | 50.0% |
!! | TGAGATGATGGACGAGGATG+AGG | + | tig0026950:5736-5755 | Msa1432090:CDS | 50.0% |
!!! | CGGTGCTGTTTATTTTCCCG+AGG | + | tig0026950:5817-5836 | Msa1432090:CDS | 50.0% |
!! | GCTGTTTATTTTCCCGAGGC+CGG | + | tig0026950:5821-5840 | Msa1432090:CDS | 50.0% |
CTCAGAAGGTTCCAGATCTC+CGG | - | tig0026950:5843-5862 | None:intergenic | 50.0% | |
! | GGAGATCTGGAACCTTCTGA+GGG | + | tig0026950:5842-5861 | Msa1432090:CDS | 50.0% |
! | TCTGGAACCTTCTGAGGGTA+TGG | + | tig0026950:5847-5866 | Msa1432090:CDS | 50.0% |
GAAACCAACACGACGAGCAT+AGG | - | tig0026950:5912-5931 | None:intergenic | 50.0% | |
TCTGAATGATAGCTCCGTCG+CGG | - | tig0026950:5967-5986 | None:intergenic | 50.0% | |
CAACCCTTGTGACTGTTCGT+GGG | - | tig0026950:6063-6082 | None:intergenic | 50.0% | |
TGCACGATTCTTCTGCCAAG+TGG | + | tig0026950:6110-6129 | Msa1432090:CDS | 50.0% | |
TCTGCCAAGTGGATCGTATC+TGG | + | tig0026950:6121-6140 | Msa1432090:CDS | 50.0% | |
GAAGCCAGATACGATCCACT+TGG | - | tig0026950:6128-6147 | None:intergenic | 50.0% | |
ACGAAGGCAGTGAACCTGAT+CGG | - | tig0026950:6182-6201 | None:intergenic | 50.0% | |
AAATTTGCCGGTGGGAACGA+AGG | - | tig0026950:6198-6217 | None:intergenic | 50.0% | |
CAGATCCAGAAATTTGCCGG+TGG | - | tig0026950:6207-6226 | None:intergenic | 50.0% | |
CACTTTACAGGCTGCTGGTA+TGG | + | tig0026950:6243-6262 | Msa1432090:CDS | 50.0% | |
!! | CAGCAAGGTTGGCTTTACTG+AGG | + | tig0026950:6312-6331 | Msa1432090:CDS | 50.0% |
TCAGTGGTTATGGAGAGTGG+GGG | - | tig0026950:6724-6743 | None:intergenic | 50.0% | |
CAAAAACGGTGACGAGTGTC+TGG | - | tig0026950:6787-6806 | None:intergenic | 50.0% | |
!! | CTCGTCACCGTTTTTGCAAG+TGG | + | tig0026950:6791-6810 | Msa1432090:CDS | 50.0% |
CGGCTTCAAAGTTTGGGAAC+TGG | - | tig0026950:6861-6880 | None:intergenic | 50.0% | |
GCTATCACTTCGCTGAGTGA+TGG | - | tig0026950:7055-7074 | None:intergenic | 50.0% | |
CACTCGATTCCAAGAGGAGT+TGG | + | tig0026950:7272-7291 | Msa1432090:CDS | 50.0% | |
! | CGATTCCAAGAGGAGTTGGT+TGG | + | tig0026950:7276-7295 | Msa1432090:CDS | 50.0% |
GGTTGGCACGCTAACATTCA+TGG | + | tig0026950:7293-7312 | Msa1432090:CDS | 50.0% | |
GCATCCAAAGCTGAGGATGA+TGG | + | tig0026950:7315-7334 | Msa1432090:CDS | 50.0% | |
AGCTGCAAAAAGAGTTGCGC+AGG | + | tig0026950:7713-7732 | Msa1432090:CDS | 50.0% | |
AGTTGCGCAGGTAATGCGAA+AGG | + | tig0026950:7725-7744 | Msa1432090:CDS | 50.0% | |
GGAGAACTCCCATCAGCAAT+GGG | + | tig0026950:7751-7770 | Msa1432090:CDS | 50.0% | |
AACTCCCATCAGCAATGGGA+AGG | + | tig0026950:7755-7774 | Msa1432090:CDS | 50.0% | |
CCTAACCTTCCCATTGCTGA+TGG | - | tig0026950:7763-7782 | None:intergenic | 50.0% | |
CCATCAGCAATGGGAAGGTT+AGG | + | tig0026950:7760-7779 | Msa1432090:CDS | 50.0% | |
TGGCTGTCAGGATGAAAGCT+TGG | + | tig0026950:7824-7843 | Msa1432090:CDS | 50.0% | |
GGCTGTCAGGATGAAAGCTT+GGG | + | tig0026950:7825-7844 | Msa1432090:CDS | 50.0% | |
TATGTCCCACCACTTTGTGG+AGG | - | tig0026950:8026-8045 | None:intergenic | 50.0% | |
GCTCTCAAGGTAAGGCTAGT+TGG | + | tig0026950:8460-8479 | Msa1432090:intron | 50.0% | |
GACCCTATCAGAGAGACCTA+AGG | - | tig0026950:9125-9144 | None:intergenic | 50.0% | |
GAAACACATGTGGCAGAGAG+TGG | + | tig0026950:9209-9228 | Msa1432090:intron | 50.0% | |
! | GTCTCTAGGTGCTTTTGCTC+TGG | + | tig0026950:9339-9358 | Msa1432090:intron | 50.0% |
!! | GGTGCCATTAATGGCACCAA+TGG | + | tig0026950:9969-9988 | Msa1432090:intron | 50.0% |
!! | GGTGCCATTGGTGCCATTAA+TGG | - | tig0026950:9976-9995 | None:intergenic | 50.0% |
! | GTGGTGGAGATGGAATTGGA+TGG | - | tig0026950:9997-10016 | None:intergenic | 50.0% |
! | GTGTGTGGTGGAGATGGAAT+TGG | - | tig0026950:10001-10020 | None:intergenic | 50.0% |
! | ATGTGTGTGTGTGGTGGAGA+TGG | - | tig0026950:10007-10026 | None:intergenic | 50.0% |
TGTGTGATGTGTGTGTGTGG+TGG | - | tig0026950:10013-10032 | None:intergenic | 50.0% | |
GTGTGTGTGATGTGTGTGTG+TGG | - | tig0026950:10016-10035 | None:intergenic | 50.0% | |
GATCTCTGCTATGGCACCAA+TGG | + | tig0026950:10081-10100 | Msa1432090:intron | 50.0% | |
! | GATGCGTTTTCTTCCCAACG+TGG | + | tig0026950:10196-10215 | Msa1432090:intron | 50.0% |
CCTTGAAACTGATCCCACGT+TGG | - | tig0026950:10213-10232 | None:intergenic | 50.0% | |
CCAACGTGGGATCAGTTTCA+AGG | + | tig0026950:10210-10229 | Msa1432090:intron | 50.0% | |
! | TCGTCTTTGGTGCGTTAGGT+AGG | - | tig0026950:10377-10396 | None:intergenic | 50.0% |
TACCTAACGCACCAAAGACG+AGG | + | tig0026950:10376-10395 | Msa1432090:intron | 50.0% | |
! | AACCTCGTCTTTGGTGCGTT+AGG | - | tig0026950:10381-10400 | None:intergenic | 50.0% |
TTGACTAGCGAACCGCGAAT+TGG | + | tig0026950:10803-10822 | Msa1432090:intron | 50.0% | |
!! | TACGCGAAAGTACCGCGAAT+CGG | - | tig0026950:10839-10858 | None:intergenic | 50.0% |
TTCGCGGTACTTTCGCGTAT+TGG | + | tig0026950:10840-10859 | Msa1432090:intron | 50.0% | |
!! | TATTGGTTCCCCCCAATTCG+TGG | + | tig0026950:10857-10876 | Msa1432090:intron | 50.0% |
CCGCAAATTTCGCCACGAAT+TGG | - | tig0026950:10872-10891 | None:intergenic | 50.0% | |
AAACGAGCGATGGAGAGTGA+AGG | + | tig0026950:10919-10938 | Msa1432090:intron | 50.0% | |
AACGAGCGATGGAGAGTGAA+GGG | + | tig0026950:10920-10939 | Msa1432090:intron | 50.0% | |
GAAGGGAGAACTGTGAGTTG+AGG | + | tig0026950:10937-10956 | Msa1432090:intron | 50.0% | |
GAAGAATTCGGTACGCATGG+GGG | - | tig0026950:11532-11551 | None:intergenic | 50.0% | |
TTATAAAGGATGGGGGTGGG+GGG | - | tig0026950:12306-12325 | None:intergenic | 50.0% | |
GGTTTGGATGGAGAACGAGG+TGG | + | tig0026950:5661-5680 | Msa1432090:exon | 55.0% | |
GCCGCCGCATATTGAGATGA+TGG | + | tig0026950:5724-5743 | Msa1432090:CDS | 55.0% | |
!! | GATGATGGACGAGGATGAGG+AGG | + | tig0026950:5739-5758 | Msa1432090:CDS | 55.0% |
! | CGGAGATCTGGAACCTTCTG+AGG | + | tig0026950:5841-5860 | Msa1432090:CDS | 55.0% |
CGAGTCTGAAGAGGCTGCTA+AGG | + | tig0026950:5874-5893 | Msa1432090:CDS | 55.0% | |
AACGCCCACGAACAGTCACA+AGG | + | tig0026950:6056-6075 | Msa1432090:CDS | 55.0% | |
ACGCCCACGAACAGTCACAA+GGG | + | tig0026950:6057-6076 | Msa1432090:CDS | 55.0% | |
CCAACCCTTGTGACTGTTCG+TGG | - | tig0026950:6064-6083 | None:intergenic | 55.0% | |
CCACGAACAGTCACAAGGGT+TGG | + | tig0026950:6061-6080 | Msa1432090:CDS | 55.0% | |
! | CGAACTTGTTCCACCCGATC+AGG | + | tig0026950:6165-6184 | Msa1432090:CDS | 55.0% |
CGAAGGCAGTGAACCTGATC+GGG | - | tig0026950:6181-6200 | None:intergenic | 55.0% | |
TTCACTGCCTTCGTTCCCAC+CGG | + | tig0026950:6188-6207 | Msa1432090:CDS | 55.0% | |
CGTTCCCACCGGCAAATTTC+TGG | + | tig0026950:6199-6218 | Msa1432090:CDS | 55.0% | |
GGGGTCAGCCCAGAAAACAT+TGG | - | tig0026950:6491-6510 | None:intergenic | 55.0% | |
! | TGTTTTCTGGGCTGACCCCA+AGG | + | tig0026950:6492-6511 | Msa1432090:CDS | 55.0% |
ACATGGCTTACCGCCATGTC+TGG | + | tig0026950:6694-6713 | Msa1432090:CDS | 55.0% | |
CAGTGGTTATGGAGAGTGGG+GGG | - | tig0026950:6723-6742 | None:intergenic | 55.0% | |
TACATTCCGCTTGCAGGCAC+TGG | + | tig0026950:6989-7008 | Msa1432090:CDS | 55.0% | |
ACATTCCGCTTGCAGGCACT+GGG | + | tig0026950:6990-7009 | Msa1432090:CDS | 55.0% | |
GGAGATGGGGTCCTCAATAC+TGG | - | tig0026950:7210-7229 | None:intergenic | 55.0% | |
ATTGAGGACCCCATCTCCGA+TGG | + | tig0026950:7212-7231 | Msa1432090:CDS | 55.0% | |
TTGCCTCTCCATCGGAGATG+GGG | - | tig0026950:7223-7242 | None:intergenic | 55.0% | |
CTTGCCTCTCCATCGGAGAT+GGG | - | tig0026950:7224-7243 | None:intergenic | 55.0% | |
TCGGATGCTTGCCTCTCCAT+CGG | - | tig0026950:7231-7250 | None:intergenic | 55.0% | |
CTCCCCATCATCCTCAGCTT+TGG | - | tig0026950:7322-7341 | None:intergenic | 55.0% | |
!! | CAAAGCTGAGGATGATGGGG+AGG | + | tig0026950:7320-7339 | Msa1432090:CDS | 55.0% |
TGCGCAGGTAATGCGAAAGG+AGG | + | tig0026950:7728-7747 | Msa1432090:CDS | 55.0% | |
GCGCAGGTAATGCGAAAGGA+GGG | + | tig0026950:7729-7748 | Msa1432090:CDS | 55.0% | |
CGCAGGTAATGCGAAAGGAG+GGG | + | tig0026950:7730-7749 | Msa1432090:CDS | 55.0% | |
GGGAGAACTCCCATCAGCAA+TGG | + | tig0026950:7750-7769 | Msa1432090:CDS | 55.0% | |
ACACATGTGGCAGAGAGTGG+TGG | + | tig0026950:9212-9231 | Msa1432090:intron | 55.0% | |
CACATGTGGCAGAGAGTGGT+GGG | + | tig0026950:9213-9232 | Msa1432090:intron | 55.0% | |
CTTGGTCAGGGGAGAGTGAT+AGG | - | tig0026950:9448-9467 | None:intergenic | 55.0% | |
ATCACACACACATCCCCACG+CGG | + | tig0026950:10036-10055 | Msa1432090:intron | 55.0% | |
TCCTGGCCGTTGATGTGTGT+GGG | - | tig0026950:10063-10082 | None:intergenic | 55.0% | |
ATCCTGGCCGTTGATGTGTG+TGG | - | tig0026950:10064-10083 | None:intergenic | 55.0% | |
AACGGCCAGGATCTCTGCTA+TGG | + | tig0026950:10072-10091 | Msa1432090:intron | 55.0% | |
!! | TGGTGCCATAGCAGAGATCC+TGG | - | tig0026950:10080-10099 | None:intergenic | 55.0% |
TGGTGCGTTAGGTAGGTGTG+TGG | - | tig0026950:10370-10389 | None:intergenic | 55.0% | |
!! | TTTGGCTGGTAGCGGCTGTT+AGG | + | tig0026950:11025-11044 | Msa1432090:intron | 55.0% |
!! | TGGTAGCGGCTGTTAGGATG+AGG | + | tig0026950:11031-11050 | Msa1432090:intron | 55.0% |
! | TCGGTACGCTTCGGTTCGTA+GGG | - | tig0026950:11500-11519 | None:intergenic | 55.0% |
! | TTCGGTACGCTTCGGTTCGT+AGG | - | tig0026950:11501-11520 | None:intergenic | 55.0% |
! | CGCATGGGGGTATAGAGCTT+CGG | - | tig0026950:11519-11538 | None:intergenic | 55.0% |
ATTCGTCCTGGTACGCGGTA+CGG | - | tig0026950:11575-11594 | None:intergenic | 55.0% | |
TCACGATTCGTCCTGGTACG+CGG | - | tig0026950:11580-11599 | None:intergenic | 55.0% | |
AGCATGAAAGACGGCCTCTG+AGG | + | tig0026950:12129-12148 | Msa1432090:CDS | 55.0% | |
! | ATGAAAGACGGCCTCTGAGG+AGG | + | tig0026950:12132-12151 | Msa1432090:exon | 55.0% |
ACTCCCACAATCCTCCTCAG+AGG | - | tig0026950:12146-12165 | None:intergenic | 55.0% | |
TATAAAGGATGGGGGTGGGG+GGG | - | tig0026950:12305-12324 | None:intergenic | 55.0% | |
TTGGGAGAAAGCAGCGGCAG+CGG | + | tig0026950:5797-5816 | Msa1432090:CDS | 60.0% | |
! | TTTTCCCGAGGCCGGAGATC+TGG | + | tig0026950:5829-5848 | Msa1432090:CDS | 60.0% |
AGGTTCCAGATCTCCGGCCT+CGG | - | tig0026950:5837-5856 | None:intergenic | 60.0% | |
AGGCAGTGAACCTGATCGGG+TGG | - | tig0026950:6178-6197 | None:intergenic | 60.0% | |
AGGTACCCAGTGCCTGCAAG+CGG | - | tig0026950:6998-7017 | None:intergenic | 60.0% | |
GCTTGCCTCTCCATCGGAGA+TGG | - | tig0026950:7225-7244 | None:intergenic | 60.0% | |
GCGTGCCAACCAACTCCTCT+TGG | - | tig0026950:7284-7303 | None:intergenic | 60.0% | |
TGATGTGTGTGGGTCCGCGT+GGG | - | tig0026950:10053-10072 | None:intergenic | 60.0% | |
TTGATGTGTGTGGGTCCGCG+TGG | - | tig0026950:10054-10073 | None:intergenic | 60.0% | |
CGCGGACCCACACACATCAA+CGG | + | tig0026950:10054-10073 | Msa1432090:intron | 60.0% | |
ACCCACACACATCAACGGCC+AGG | + | tig0026950:10059-10078 | Msa1432090:intron | 60.0% | |
!! | GAACCGCGAATTGGTTCGCG+CGG | + | tig0026950:10812-10831 | Msa1432090:intron | 60.0% |
TTCGTCCTGGTACGCGGTAC+GGG | - | tig0026950:11574-11593 | None:intergenic | 60.0% | |
! | ACGGCCTCTGAGGAGGATTG+TGG | + | tig0026950:12139-12158 | Msa1432090:exon | 60.0% |
! | CGGCCTCTGAGGAGGATTGT+GGG | + | tig0026950:12140-12159 | Msa1432090:exon | 60.0% |
ATAAAGGATGGGGGTGGGGG+GGG | - | tig0026950:12304-12323 | None:intergenic | 60.0% | |
GGTTCCAGATCTCCGGCCTC+GGG | - | tig0026950:5836-5855 | None:intergenic | 65.0% | |
TCTCGTCGTTCTCGCCGCGA+CGG | + | tig0026950:5950-5969 | Msa1432090:CDS | 65.0% | |
TCTGGGCTGACCCCAAGGCA+AGG | + | tig0026950:6497-6516 | Msa1432090:CDS | 65.0% | |
GGACCCCATCTCCGATGGAG+AGG | + | tig0026950:7217-7236 | Msa1432090:CDS | 65.0% | |
!! | GTGGCAGAGAGTGGTGGGTG+AGG | + | tig0026950:9218-9237 | Msa1432090:intron | 65.0% |
GATGTGTGTGGGTCCGCGTG+GGG | - | tig0026950:10052-10071 | None:intergenic | 65.0% | |
GGTCCGCGCGAACCAATTCG+CGG | - | tig0026950:10818-10837 | None:intergenic | 65.0% | |
TGGTACGCGGTACGGGTTCG+CGG | - | tig0026950:11567-11586 | None:intergenic | 65.0% | |
!! | TGGGGGGCGTCCAGACATGG+CGG | - | tig0026950:6707-6726 | None:intergenic | 70.0% |
!! | GAGTGGGGGGCGTCCAGACA+TGG | - | tig0026950:6710-6729 | None:intergenic | 70.0% |
!! | GGTTCGCGCGGACCGATTCG+CGG | + | tig0026950:10824-10843 | Msa1432090:intron | 70.0% |
GCGAACCCGTACCGCGTACC+AGG | + | tig0026950:11566-11585 | Msa1432090:intron | 70.0% | |
AGGATGGGGGTGGGGGGGGA+AGG | - | tig0026950:12300-12319 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0026950 | gene | 5565 | 12462 | 5565 | ID=Msa1432090;Name=Msa1432090 |
tig0026950 | mRNA | 5565 | 12462 | 5565 | ID=Msa1432090-mRNA-1;Parent=Msa1432090;Name=Msa1432090-mRNA-1;_AED=0.00;_eAED=0.00;_QI=103|1|1|1|1|1|2|313|789 |
tig0026950 | exon | 5565 | 7863 | 5565 | ID=Msa1432090-mRNA-1:exon:7888;Parent=Msa1432090-mRNA-1 |
tig0026950 | exon | 11976 | 12462 | 11976 | ID=Msa1432090-mRNA-1:exon:7889;Parent=Msa1432090-mRNA-1 |
tig0026950 | five_prime_UTR | 5565 | 5667 | 5565 | ID=Msa1432090-mRNA-1:five_prime_utr;Parent=Msa1432090-mRNA-1 |
tig0026950 | CDS | 5668 | 7863 | 5668 | ID=Msa1432090-mRNA-1:cds;Parent=Msa1432090-mRNA-1 |
tig0026950 | CDS | 11976 | 12149 | 11976 | ID=Msa1432090-mRNA-1:cds;Parent=Msa1432090-mRNA-1 |
tig0026950 | three_prime_UTR | 12150 | 12462 | 12150 | ID=Msa1432090-mRNA-1:three_prime_utr;Parent=Msa1432090-mRNA-1 |
Gene Sequence |
Protein sequence |