Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1412820 | sp|Q9T072|BH025_ARATH | 55.556 | 180 | 75 | 3 | 134 | 310 | 151 | 328 | 1.21e-53 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1412820 | G7JTZ1 | 94.839 | 310 | 16 | 0 | 1 | 310 | 24 | 333 | 0.0 | 611 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1412820 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0654550 | Msa1412820 | 0.817988 | 2.478068e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1412820 | MtrunA17_Chr4g0049331 | 94.839 | 310 | 16 | 0 | 1 | 310 | 1 | 310 | 0.0 | 610 |
| Msa1412820 | MtrunA17_Chr2g0280161 | 53.009 | 349 | 120 | 9 | 4 | 310 | 7 | 353 | 7.44e-110 | 323 |
| Msa1412820 | MtrunA17_Chr5g0400661 | 54.011 | 187 | 71 | 3 | 134 | 306 | 148 | 333 | 7.59e-57 | 186 |
| Msa1412820 | MtrunA17_Chr4g0054561 | 37.910 | 335 | 176 | 9 | 1 | 310 | 1 | 328 | 1.37e-54 | 180 |
| Msa1412820 | MtrunA17_Chr4g0054551 | 37.313 | 335 | 178 | 9 | 1 | 310 | 1 | 328 | 2.28e-52 | 174 |
| Msa1412820 | MtrunA17_Chr5g0400621 | 49.198 | 187 | 93 | 2 | 118 | 303 | 140 | 325 | 2.63e-51 | 172 |
| Msa1412820 | MtrunA17_Chr4g0054571 | 54.749 | 179 | 68 | 4 | 135 | 303 | 150 | 325 | 9.28e-45 | 155 |
| Msa1412820 | MtrunA17_Chr5g0400671 | 39.409 | 203 | 110 | 3 | 113 | 306 | 124 | 322 | 4.98e-44 | 153 |
| Msa1412820 | MtrunA17_Chr8g0336681 | 40.179 | 224 | 112 | 4 | 100 | 303 | 110 | 331 | 1.71e-43 | 152 |
| Msa1412820 | MtrunA17_Chr2g0333621 | 46.857 | 175 | 88 | 2 | 135 | 306 | 138 | 310 | 2.36e-42 | 148 |
| Msa1412820 | MtrunA17_Chr6g0468491 | 45.000 | 180 | 97 | 2 | 125 | 303 | 127 | 305 | 3.55e-42 | 147 |
| Msa1412820 | MtrunA17_Chr4g0054581 | 44.724 | 199 | 100 | 5 | 119 | 310 | 182 | 377 | 4.06e-42 | 149 |
| Msa1412820 | MtrunA17_Chr2g0307131 | 41.848 | 184 | 107 | 0 | 127 | 310 | 171 | 354 | 4.78e-40 | 143 |
| Msa1412820 | MtrunA17_Chr4g0033291 | 40.000 | 215 | 107 | 5 | 107 | 309 | 122 | 326 | 1.54e-39 | 141 |
| Msa1412820 | MtrunA17_Chr4g0002801 | 43.820 | 178 | 94 | 2 | 135 | 306 | 152 | 329 | 4.47e-39 | 140 |
| Msa1412820 | MtrunA17_Chr2g0307141 | 41.243 | 177 | 104 | 0 | 134 | 310 | 182 | 358 | 9.34e-39 | 140 |
| Msa1412820 | MtrunA17_Chr4g0002781 | 43.429 | 175 | 96 | 1 | 135 | 306 | 174 | 348 | 2.58e-37 | 136 |
| Msa1412820 | MtrunA17_Chr4g0033391 | 39.583 | 192 | 100 | 4 | 125 | 310 | 138 | 319 | 1.17e-36 | 134 |
| Msa1412820 | MtrunA17_Chr4g0033281 | 37.915 | 211 | 118 | 4 | 107 | 310 | 120 | 324 | 1.49e-36 | 133 |
| Msa1412820 | MtrunA17_Chr5g0400641 | 44.516 | 155 | 84 | 2 | 138 | 291 | 1 | 154 | 1.54e-36 | 128 |
| Msa1412820 | MtrunA17_Chr7g0225901 | 40.314 | 191 | 101 | 4 | 105 | 288 | 57 | 241 | 1.68e-36 | 131 |
| Msa1412820 | MtrunA17_Chr2g0333641 | 43.103 | 174 | 97 | 1 | 135 | 308 | 137 | 308 | 3.31e-36 | 132 |
| Msa1412820 | MtrunA17_Chr7g0249811 | 43.158 | 190 | 96 | 5 | 115 | 303 | 146 | 324 | 5.91e-36 | 132 |
| Msa1412820 | MtrunA17_Chr4g0054621 | 40.449 | 178 | 97 | 3 | 134 | 310 | 171 | 340 | 5.83e-35 | 129 |
| Msa1412820 | MtrunA17_Chr2g0333611 | 38.636 | 176 | 94 | 4 | 134 | 303 | 44 | 211 | 3.00e-34 | 124 |
| Msa1412820 | MtrunA17_Chr6g0468461 | 44.805 | 154 | 71 | 4 | 134 | 287 | 172 | 311 | 1.41e-29 | 115 |
| Msa1412820 | MtrunA17_Chr2g0333541 | 38.119 | 202 | 115 | 5 | 110 | 307 | 73 | 268 | 1.76e-28 | 110 |
| Msa1412820 | MtrunA17_Chr4g0002831 | 36.723 | 177 | 98 | 5 | 133 | 308 | 42 | 205 | 4.75e-24 | 97.4 |
| Msa1412820 | MtrunA17_Chr7g0233441 | 35.948 | 153 | 88 | 2 | 156 | 308 | 55 | 197 | 4.04e-23 | 94.4 |
| Msa1412820 | MtrunA17_Chr4g0002851 | 35.294 | 153 | 81 | 2 | 156 | 308 | 63 | 197 | 6.19e-22 | 91.3 |
| Msa1412820 | MtrunA17_Chr7g0260841 | 53.125 | 64 | 30 | 0 | 133 | 196 | 353 | 416 | 3.49e-16 | 79.0 |
| Msa1412820 | MtrunA17_Chr1g0185621 | 29.310 | 174 | 113 | 3 | 103 | 266 | 441 | 614 | 6.88e-16 | 78.2 |
| Msa1412820 | MtrunA17_Chr7g0275821 | 34.058 | 138 | 81 | 3 | 133 | 269 | 250 | 378 | 7.08e-16 | 77.8 |
| Msa1412820 | MtrunA17_Chr8g0366751 | 30.380 | 158 | 81 | 3 | 133 | 270 | 460 | 608 | 4.77e-15 | 75.5 |
| Msa1412820 | MtrunA17_Chr8g0346161 | 29.091 | 165 | 98 | 4 | 120 | 273 | 274 | 430 | 1.42e-14 | 73.9 |
| Msa1412820 | MtrunA17_Chr3g0131691 | 27.711 | 166 | 104 | 3 | 129 | 281 | 292 | 454 | 2.28e-14 | 73.2 |
| Msa1412820 | MtrunA17_Chr5g0411341 | 28.188 | 149 | 96 | 2 | 133 | 270 | 491 | 639 | 5.07e-13 | 69.7 |
| Msa1412820 | MtrunA17_Chr7g0252041 | 29.012 | 162 | 103 | 4 | 132 | 281 | 283 | 444 | 5.71e-13 | 68.9 |
| Msa1412820 | MtrunA17_Chr8g0386921 | 46.269 | 67 | 36 | 0 | 125 | 191 | 396 | 462 | 5.89e-13 | 69.3 |
| Msa1412820 | MtrunA17_Chr8g0365711 | 27.935 | 247 | 159 | 9 | 50 | 284 | 159 | 398 | 2.12e-12 | 67.4 |
| Msa1412820 | MtrunA17_Chr8g0346151 | 43.662 | 71 | 38 | 1 | 120 | 188 | 262 | 332 | 7.50e-12 | 65.9 |
| Msa1412820 | MtrunA17_Chr2g0298751 | 26.829 | 164 | 103 | 4 | 136 | 284 | 53 | 214 | 8.43e-12 | 64.3 |
| Msa1412820 | MtrunA17_Chr2g0320291 | 30.216 | 139 | 91 | 3 | 137 | 273 | 135 | 269 | 9.64e-12 | 64.7 |
| Msa1412820 | MtrunA17_Chr5g0411541 | 22.297 | 296 | 187 | 8 | 37 | 302 | 32 | 314 | 1.93e-11 | 63.9 |
| Msa1412820 | MtrunA17_Chr1g0211081 | 49.091 | 55 | 28 | 0 | 136 | 190 | 318 | 372 | 2.02e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1412820 | AT4G37850.2 | 55.556 | 180 | 75 | 3 | 134 | 310 | 151 | 328 | 1.23e-54 | 181 |
| Msa1412820 | AT4G37850.1 | 55.556 | 180 | 75 | 3 | 134 | 310 | 151 | 328 | 1.23e-54 | 181 |
| Msa1412820 | AT2G22760.1 | 47.727 | 176 | 88 | 2 | 132 | 303 | 116 | 291 | 1.46e-48 | 164 |
| Msa1412820 | AT2G22750.2 | 49.309 | 217 | 96 | 7 | 93 | 302 | 88 | 297 | 1.49e-44 | 154 |
| Msa1412820 | AT2G22750.3 | 49.309 | 217 | 96 | 7 | 93 | 302 | 116 | 325 | 1.86e-44 | 154 |
| Msa1412820 | AT2G22750.5 | 49.309 | 217 | 96 | 7 | 93 | 302 | 112 | 321 | 2.18e-44 | 154 |
| Msa1412820 | AT2G22750.1 | 49.309 | 217 | 95 | 8 | 93 | 302 | 88 | 296 | 4.67e-43 | 150 |
| Msa1412820 | AT2G22750.4 | 49.309 | 217 | 95 | 8 | 93 | 302 | 116 | 324 | 5.85e-43 | 150 |
| Msa1412820 | AT2G22760.2 | 45.283 | 159 | 84 | 1 | 132 | 287 | 116 | 274 | 1.82e-40 | 143 |
| Msa1412820 | AT2G22770.1 | 43.850 | 187 | 90 | 2 | 132 | 303 | 129 | 315 | 2.09e-40 | 144 |
| Msa1412820 | AT2G46510.1 | 42.342 | 111 | 46 | 2 | 133 | 243 | 393 | 485 | 5.41e-18 | 84.7 |
| Msa1412820 | AT1G32640.1 | 34.965 | 143 | 86 | 2 | 133 | 271 | 450 | 589 | 1.38e-15 | 77.8 |
| Msa1412820 | AT1G01260.1 | 32.680 | 153 | 89 | 5 | 51 | 191 | 339 | 489 | 1.73e-14 | 74.3 |
| Msa1412820 | AT1G01260.2 | 32.680 | 153 | 89 | 5 | 51 | 191 | 339 | 489 | 1.73e-14 | 74.3 |
| Msa1412820 | AT1G01260.3 | 32.680 | 153 | 89 | 5 | 51 | 191 | 339 | 489 | 1.73e-14 | 74.3 |
| Msa1412820 | AT5G46760.1 | 31.579 | 152 | 82 | 4 | 133 | 271 | 413 | 555 | 3.58e-14 | 73.2 |
| Msa1412820 | AT4G17880.1 | 30.556 | 144 | 90 | 3 | 133 | 271 | 414 | 552 | 6.62e-14 | 72.4 |
| Msa1412820 | AT4G29930.6 | 28.492 | 179 | 95 | 5 | 124 | 290 | 46 | 203 | 7.02e-14 | 70.1 |
| Msa1412820 | AT2G16910.1 | 29.897 | 194 | 100 | 7 | 136 | 301 | 315 | 500 | 9.48e-14 | 72.0 |
| Msa1412820 | AT4G29930.2 | 30.952 | 168 | 102 | 6 | 124 | 290 | 46 | 200 | 1.37e-13 | 69.3 |
| Msa1412820 | AT1G12860.2 | 29.299 | 157 | 103 | 4 | 132 | 281 | 264 | 419 | 1.54e-13 | 71.2 |
| Msa1412820 | AT4G16430.1 | 48.438 | 64 | 33 | 0 | 135 | 198 | 320 | 383 | 1.69e-13 | 71.2 |
| Msa1412820 | AT1G12860.1 | 29.299 | 157 | 103 | 4 | 132 | 281 | 264 | 419 | 1.91e-13 | 70.9 |
| Msa1412820 | AT5G57150.3 | 32.903 | 155 | 83 | 4 | 136 | 275 | 56 | 204 | 2.12e-13 | 68.6 |
| Msa1412820 | AT3G26744.6 | 29.193 | 161 | 102 | 4 | 132 | 281 | 304 | 463 | 2.39e-13 | 70.9 |
| Msa1412820 | AT5G57150.2 | 32.903 | 155 | 83 | 4 | 136 | 275 | 56 | 204 | 2.52e-13 | 68.6 |
| Msa1412820 | AT3G26744.1 | 29.193 | 161 | 102 | 4 | 132 | 281 | 304 | 463 | 2.55e-13 | 70.5 |
| Msa1412820 | AT3G26744.4 | 29.193 | 161 | 102 | 4 | 132 | 281 | 304 | 463 | 2.55e-13 | 70.5 |
| Msa1412820 | AT3G26744.2 | 29.193 | 161 | 102 | 4 | 132 | 281 | 304 | 463 | 2.55e-13 | 70.5 |
| Msa1412820 | AT5G57150.5 | 32.903 | 155 | 83 | 4 | 136 | 275 | 55 | 203 | 2.62e-13 | 68.6 |
| Msa1412820 | AT5G57150.1 | 32.903 | 155 | 83 | 4 | 136 | 275 | 55 | 203 | 3.78e-13 | 68.6 |
| Msa1412820 | AT5G57150.4 | 32.903 | 155 | 83 | 4 | 136 | 275 | 56 | 204 | 6.17e-13 | 68.2 |
| Msa1412820 | AT4G09820.1 | 30.282 | 142 | 70 | 4 | 132 | 267 | 357 | 475 | 7.79e-13 | 69.3 |
| Msa1412820 | AT4G29930.5 | 29.697 | 165 | 102 | 5 | 124 | 287 | 46 | 197 | 8.81e-13 | 67.0 |
| Msa1412820 | AT1G63650.3 | 38.554 | 83 | 51 | 0 | 135 | 217 | 405 | 487 | 9.86e-13 | 68.9 |
| Msa1412820 | AT1G63650.1 | 38.554 | 83 | 51 | 0 | 135 | 217 | 405 | 487 | 9.86e-13 | 68.9 |
| Msa1412820 | AT1G63650.2 | 38.554 | 83 | 51 | 0 | 135 | 217 | 405 | 487 | 9.86e-13 | 68.9 |
| Msa1412820 | AT4G29930.1 | 28.723 | 188 | 109 | 7 | 124 | 290 | 46 | 229 | 1.53e-11 | 63.9 |
| Msa1412820 | AT3G61950.6 | 30.556 | 144 | 92 | 4 | 135 | 273 | 128 | 268 | 1.89e-11 | 64.3 |
| Msa1412820 | AT3G61950.2 | 30.556 | 144 | 92 | 4 | 135 | 273 | 128 | 268 | 3.11e-11 | 63.5 |
| Msa1412820 | AT3G61950.3 | 30.556 | 144 | 92 | 4 | 135 | 273 | 179 | 319 | 4.31e-11 | 63.5 |
| Msa1412820 | AT5G41315.2 | 35.789 | 95 | 53 | 2 | 102 | 188 | 408 | 502 | 4.71e-11 | 63.9 |
| Msa1412820 | AT4G29930.4 | 44.776 | 67 | 34 | 1 | 124 | 190 | 46 | 109 | 4.73e-11 | 61.2 |
| Msa1412820 | AT5G41315.3 | 35.789 | 95 | 53 | 2 | 102 | 188 | 405 | 499 | 4.96e-11 | 63.9 |
| Msa1412820 | AT5G41315.1 | 35.789 | 95 | 53 | 2 | 102 | 188 | 400 | 494 | 5.42e-11 | 63.9 |
| Msa1412820 | AT3G61950.1 | 30.556 | 144 | 92 | 4 | 135 | 273 | 179 | 319 | 6.73e-11 | 62.8 |
Find 57 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATCTTGCTTCAATTTC+TGG | 0.046048 | tig0023956:+78206 | None:intergenic |
| GCAGTTTCCATTGAAATTCT+AGG | 0.225163 | tig0023956:+78987 | None:intergenic |
| GAAAATTCTTCTGCAGAATT+TGG | 0.250591 | tig0023956:-78251 | Msa1412820:CDS |
| ATGGACAAAGTTACTGTTCT+TGG | 0.276006 | tig0023956:-78398 | Msa1412820:CDS |
| AATAGCAGTTTCATGACATT+TGG | 0.296146 | tig0023956:-78086 | Msa1412820:CDS |
| GCTTTCTTTCAGATATTATA+TGG | 0.308934 | tig0023956:+78757 | None:intergenic |
| CTGCCAATAGGTACTGCTTT+TGG | 0.314519 | tig0023956:-79053 | Msa1412820:CDS |
| GCTCTATCTTCCCTTGTTCC+CGG | 0.327620 | tig0023956:-78705 | Msa1412820:CDS |
| GTGCAATTTGCAGATGGATA+TGG | 0.328392 | tig0023956:-77855 | Msa1412820:intron |
| GATTGAGTTTCTCAATTTCA+TGG | 0.328907 | tig0023956:+78120 | None:intergenic |
| GAACCAATCATCTCATCCTT+AGG | 0.367456 | tig0023956:+78876 | None:intergenic |
| GAAATTCTAGGGTTGAAGTT+TGG | 0.375240 | tig0023956:+78999 | None:intergenic |
| AGGAACCTTTGAGGCCAAAA+AGG | 0.379217 | tig0023956:-78814 | Msa1412820:CDS |
| TCGACAAATGAAAGAAGATT+CGG | 0.392423 | tig0023956:+78933 | None:intergenic |
| CTTCAACCCTAGAATTTCAA+TGG | 0.403679 | tig0023956:-78994 | Msa1412820:CDS |
| TATCAGAGGGTTTCCTGAGC+AGG | 0.415708 | tig0023956:-79352 | Msa1412820:intron |
| ATAGCAGTTTCATGACATTT+GGG | 0.420095 | tig0023956:-78085 | Msa1412820:CDS |
| TTTGAATCAGTTAAATCAGT+TGG | 0.433019 | tig0023956:-78910 | Msa1412820:CDS |
| CCTTGTTCCCGGACTACAAA+AGG | 0.436297 | tig0023956:-78694 | Msa1412820:intron |
| TCTCACAGTGAACTCTTATG+AGG | 0.440028 | tig0023956:+78171 | None:intergenic |
| TCTTGAGGAAGAGAGAGTTT+AGG | 0.440922 | tig0023956:+78780 | None:intergenic |
| TTGAATCAGTTAAATCAGTT+GGG | 0.451883 | tig0023956:-78909 | Msa1412820:CDS |
| GAGTCTAACTCACTGCCAAT+AGG | 0.462111 | tig0023956:-79065 | Msa1412820:CDS |
| CAGTTTCCATTGAAATTCTA+GGG | 0.464030 | tig0023956:+78988 | None:intergenic |
| TCTCCAAAAGCAGTACCTAT+TGG | 0.467684 | tig0023956:+79050 | None:intergenic |
| GAGAATATTTCATTTATCAG+AGG | 0.468225 | tig0023956:-79366 | Msa1412820:CDS |
| CGACAAATGAAAGAAGATTC+GGG | 0.471965 | tig0023956:+78934 | None:intergenic |
| ACTATATGTCTTACCTGCTC+AGG | 0.472883 | tig0023956:+79339 | None:intergenic |
| TTCTGGCAGTTCCTCGTCAA+AGG | 0.474337 | tig0023956:+78223 | None:intergenic |
| TTTGATCTTGCAGGAAATGA+TGG | 0.481839 | tig0023956:-79135 | Msa1412820:intron |
| AACCAATCATCTCATCCTTA+GGG | 0.484158 | tig0023956:+78877 | None:intergenic |
| GATTTCTCAAGGAACCTTTG+AGG | 0.485480 | tig0023956:-78823 | Msa1412820:CDS |
| AAATGTCATGAAACTGCTAT+TGG | 0.489746 | tig0023956:+78088 | None:intergenic |
| AATTCTTCTGCAGAATTTGG+TGG | 0.492167 | tig0023956:-78248 | Msa1412820:CDS |
| TCTGGCAGTTCCTCGTCAAA+GGG | 0.506650 | tig0023956:+78224 | None:intergenic |
| CTTCATTTCTTCATCATCAG+TGG | 0.507118 | tig0023956:-79106 | Msa1412820:CDS |
| TCAGTTAAATCAGTTGGGAT+TGG | 0.511136 | tig0023956:-78904 | Msa1412820:CDS |
| AACCCTAAGGATGAGATGAT+TGG | 0.511495 | tig0023956:-78879 | Msa1412820:CDS |
| TGATATAACAATTATTGCAC+AGG | 0.531379 | tig0023956:-78051 | Msa1412820:intron |
| AGAATATTTCATTTATCAGA+GGG | 0.537343 | tig0023956:-79365 | Msa1412820:CDS |
| TGAGAAAATCAAAGGAGTTG+TGG | 0.539482 | tig0023956:-78153 | Msa1412820:CDS |
| CACTGATGATGAAGAAATGA+AGG | 0.551145 | tig0023956:+79107 | None:intergenic |
| TCTTCCGACATGATTTCTCA+AGG | 0.551521 | tig0023956:-78834 | Msa1412820:CDS |
| TCAGATATTATATGGTCTTG+AGG | 0.555208 | tig0023956:+78765 | None:intergenic |
| GTTGGGATTGGTGAACCCTA+AGG | 0.558665 | tig0023956:-78892 | Msa1412820:CDS |
| AAGATAGAGCAATGAAGCGC+TGG | 0.560225 | tig0023956:+78718 | None:intergenic |
| GTTCACTGTGAGAAAATCAA+AGG | 0.561408 | tig0023956:-78161 | Msa1412820:CDS |
| AGTTTGGATAAACGTATGAA+TGG | 0.568981 | tig0023956:+79015 | None:intergenic |
| AGAGAAGGTGAAGGTTCTTG+AGG | 0.571434 | tig0023956:-78345 | Msa1412820:CDS |
| CTTGAAGAAATTGCAAGAGA+AGG | 0.585063 | tig0023956:-78360 | Msa1412820:CDS |
| GAAGGTGAAGGTTCTTGAGG+AGG | 0.607165 | tig0023956:-78342 | Msa1412820:CDS |
| ATATAATATCTGAAAGAAAG+CGG | 0.617975 | tig0023956:-78755 | Msa1412820:CDS |
| ATTTGGTGGTCCCTTTGACG+AGG | 0.618695 | tig0023956:-78234 | Msa1412820:CDS |
| AATGAAAGAAGATTCGGGTA+CGG | 0.630607 | tig0023956:+78939 | None:intergenic |
| GATCTTGCAGGAAATGATGG+AGG | 0.636854 | tig0023956:-79132 | Msa1412820:intron |
| GAAATTGCAAGAGAAGGTGA+AGG | 0.642638 | tig0023956:-78354 | Msa1412820:CDS |
| GGTTCCTTGAGAAATCATGT+CGG | 0.702500 | tig0023956:+78830 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAGAAAATTATGCA+TGG | + | tig0023956:79237-79256 | None:intergenic | 15.0% |
| !! | AAATAATAGAAAATTATGCA+TGG | + | tig0023956:79237-79256 | None:intergenic | 15.0% |
| !! | AGAATATTTCATTTATCAGA+GGG | - | tig0023956:77794-77813 | Msa1412820:CDS | 20.0% |
| !! | AAAGAGAAGTAATCTAATAA+AGG | - | tig0023956:77954-77973 | Msa1412820:intron | 20.0% |
| !! | ATATAATATCTGAAAGAAAG+CGG | - | tig0023956:78404-78423 | Msa1412820:intron | 20.0% |
| !! | ATTTAGTGTTTACTATTAGT+AGG | - | tig0023956:78651-78670 | Msa1412820:intron | 20.0% |
| !! | AATATATAAGAATGTGTTTG+TGG | - | tig0023956:78684-78703 | Msa1412820:intron | 20.0% |
| !! | AGAATATTTCATTTATCAGA+GGG | - | tig0023956:77794-77813 | Msa1412820:CDS | 20.0% |
| !! | AAAGAGAAGTAATCTAATAA+AGG | - | tig0023956:77954-77973 | Msa1412820:intron | 20.0% |
| !! | ATATAATATCTGAAAGAAAG+CGG | - | tig0023956:78404-78423 | Msa1412820:intron | 20.0% |
| !! | ATTTAGTGTTTACTATTAGT+AGG | - | tig0023956:78651-78670 | Msa1412820:intron | 20.0% |
| !! | AATATATAAGAATGTGTTTG+TGG | - | tig0023956:78684-78703 | Msa1412820:intron | 20.0% |
| ! | GAGAATATTTCATTTATCAG+AGG | - | tig0023956:77793-77812 | Msa1412820:CDS | 25.0% |
| ! | CTTACTATACATTCATACTT+TGG | - | tig0023956:77867-77886 | Msa1412820:intron | 25.0% |
| !!! | CTTATTTTCTAACCAAATGT+TGG | + | tig0023956:77915-77934 | None:intergenic | 25.0% |
| ! | TTTGAATCAGTTAAATCAGT+TGG | - | tig0023956:78249-78268 | Msa1412820:CDS | 25.0% |
| ! | TTGAATCAGTTAAATCAGTT+GGG | - | tig0023956:78250-78269 | Msa1412820:CDS | 25.0% |
| ! | GCTTTCTTTCAGATATTATA+TGG | + | tig0023956:78405-78424 | None:intergenic | 25.0% |
| !! | TTTTTATACCTTTTGTAGTC+CGG | + | tig0023956:78476-78495 | None:intergenic | 25.0% |
| ! | CTCTACAAAACAAATTTGTA+AGG | - | tig0023956:78543-78562 | Msa1412820:intron | 25.0% |
| !! | AGAAGAATTTTCAACATCAT+TGG | + | tig0023956:78900-78919 | None:intergenic | 25.0% |
| ! | TGATATAACAATTATTGCAC+AGG | - | tig0023956:79108-79127 | Msa1412820:CDS | 25.0% |
| ! | ACTACAATTGTCTATCAATA+TGG | - | tig0023956:79272-79291 | Msa1412820:intron | 25.0% |
| ! | GAGAATATTTCATTTATCAG+AGG | - | tig0023956:77793-77812 | Msa1412820:CDS | 25.0% |
| ! | CTTACTATACATTCATACTT+TGG | - | tig0023956:77867-77886 | Msa1412820:intron | 25.0% |
| !!! | CTTATTTTCTAACCAAATGT+TGG | + | tig0023956:77915-77934 | None:intergenic | 25.0% |
| ! | TTTGAATCAGTTAAATCAGT+TGG | - | tig0023956:78249-78268 | Msa1412820:CDS | 25.0% |
| ! | TTGAATCAGTTAAATCAGTT+GGG | - | tig0023956:78250-78269 | Msa1412820:CDS | 25.0% |
| ! | GCTTTCTTTCAGATATTATA+TGG | + | tig0023956:78405-78424 | None:intergenic | 25.0% |
| !! | TTTTTATACCTTTTGTAGTC+CGG | + | tig0023956:78476-78495 | None:intergenic | 25.0% |
| ! | CTCTACAAAACAAATTTGTA+AGG | - | tig0023956:78543-78562 | Msa1412820:intron | 25.0% |
| !! | AGAAGAATTTTCAACATCAT+TGG | + | tig0023956:78900-78919 | None:intergenic | 25.0% |
| ! | TGATATAACAATTATTGCAC+AGG | - | tig0023956:79108-79127 | Msa1412820:CDS | 25.0% |
| ! | ACTACAATTGTCTATCAATA+TGG | - | tig0023956:79272-79291 | Msa1412820:intron | 25.0% |
| ! | TTTTCTAACCAAATGTTGGA+TGG | + | tig0023956:77911-77930 | None:intergenic | 30.0% |
| ! | AGTAATCTAATAAAGGCACA+AGG | - | tig0023956:77961-77980 | Msa1412820:intron | 30.0% |
| ! | ACATGTTTTCACAATGTTCA+TGG | + | tig0023956:78003-78022 | None:intergenic | 30.0% |
| AGTTTGGATAAACGTATGAA+TGG | + | tig0023956:78147-78166 | None:intergenic | 30.0% | |
| CAGTTTCCATTGAAATTCTA+GGG | + | tig0023956:78174-78193 | None:intergenic | 30.0% | |
| TCGACAAATGAAAGAAGATT+CGG | + | tig0023956:78229-78248 | None:intergenic | 30.0% | |
| ! | TCAGATATTATATGGTCTTG+AGG | + | tig0023956:78397-78416 | None:intergenic | 30.0% |
| ! | TTTTATACCTTTTGTAGTCC+GGG | + | tig0023956:78475-78494 | None:intergenic | 30.0% |
| TATCTATGTTGAACACATGT+TGG | - | tig0023956:78625-78644 | Msa1412820:intron | 30.0% | |
| TTTACTATTAGTAGGACACA+CGG | - | tig0023956:78659-78678 | Msa1412820:intron | 30.0% | |
| GAAAATTCTTCTGCAGAATT+TGG | - | tig0023956:78908-78927 | Msa1412820:CDS | 30.0% | |
| CAAAATCTTGCTTCAATTTC+TGG | + | tig0023956:78956-78975 | None:intergenic | 30.0% | |
| GATTGAGTTTCTCAATTTCA+TGG | + | tig0023956:79042-79061 | None:intergenic | 30.0% | |
| AAATGTCATGAAACTGCTAT+TGG | + | tig0023956:79074-79093 | None:intergenic | 30.0% | |
| AATAGCAGTTTCATGACATT+TGG | - | tig0023956:79073-79092 | Msa1412820:CDS | 30.0% | |
| ATAGCAGTTTCATGACATTT+GGG | - | tig0023956:79074-79093 | Msa1412820:CDS | 30.0% | |
| GACAATTGTAGTAATTTCGT+TGG | + | tig0023956:79264-79283 | None:intergenic | 30.0% | |
| ! | TTTTCTAACCAAATGTTGGA+TGG | + | tig0023956:77911-77930 | None:intergenic | 30.0% |
| ! | AGTAATCTAATAAAGGCACA+AGG | - | tig0023956:77961-77980 | Msa1412820:intron | 30.0% |
| ! | ACATGTTTTCACAATGTTCA+TGG | + | tig0023956:78003-78022 | None:intergenic | 30.0% |
| AGTTTGGATAAACGTATGAA+TGG | + | tig0023956:78147-78166 | None:intergenic | 30.0% | |
| CAGTTTCCATTGAAATTCTA+GGG | + | tig0023956:78174-78193 | None:intergenic | 30.0% | |
| TCGACAAATGAAAGAAGATT+CGG | + | tig0023956:78229-78248 | None:intergenic | 30.0% | |
| ! | TCAGATATTATATGGTCTTG+AGG | + | tig0023956:78397-78416 | None:intergenic | 30.0% |
| ! | TTTTATACCTTTTGTAGTCC+GGG | + | tig0023956:78475-78494 | None:intergenic | 30.0% |
| TATCTATGTTGAACACATGT+TGG | - | tig0023956:78625-78644 | Msa1412820:intron | 30.0% | |
| TTTACTATTAGTAGGACACA+CGG | - | tig0023956:78659-78678 | Msa1412820:intron | 30.0% | |
| GAAAATTCTTCTGCAGAATT+TGG | - | tig0023956:78908-78927 | Msa1412820:CDS | 30.0% | |
| CAAAATCTTGCTTCAATTTC+TGG | + | tig0023956:78956-78975 | None:intergenic | 30.0% | |
| GATTGAGTTTCTCAATTTCA+TGG | + | tig0023956:79042-79061 | None:intergenic | 30.0% | |
| AAATGTCATGAAACTGCTAT+TGG | + | tig0023956:79074-79093 | None:intergenic | 30.0% | |
| AATAGCAGTTTCATGACATT+TGG | - | tig0023956:79073-79092 | Msa1412820:CDS | 30.0% | |
| ATAGCAGTTTCATGACATTT+GGG | - | tig0023956:79074-79093 | Msa1412820:CDS | 30.0% | |
| GACAATTGTAGTAATTTCGT+TGG | + | tig0023956:79264-79283 | None:intergenic | 30.0% | |
| ! | ACTTTGGCAGTGACTAATTT+TGG | - | tig0023956:77883-77902 | Msa1412820:intron | 35.0% |
| !!! | TTTTGGAACCATCCAACATT+TGG | - | tig0023956:77900-77919 | Msa1412820:intron | 35.0% |
| AAACATGTGTTTGATCTTGC+AGG | - | tig0023956:78015-78034 | Msa1412820:intron | 35.0% | |
| TTTGATCTTGCAGGAAATGA+TGG | - | tig0023956:78024-78043 | Msa1412820:intron | 35.0% | |
| ! | CACTGATGATGAAGAAATGA+AGG | + | tig0023956:78055-78074 | None:intergenic | 35.0% |
| CTTCATTTCTTCATCATCAG+TGG | - | tig0023956:78053-78072 | Msa1412820:CDS | 35.0% | |
| !! | GAAATTCTAGGGTTGAAGTT+TGG | + | tig0023956:78163-78182 | None:intergenic | 35.0% |
| CTTCAACCCTAGAATTTCAA+TGG | - | tig0023956:78165-78184 | Msa1412820:CDS | 35.0% | |
| GCAGTTTCCATTGAAATTCT+AGG | + | tig0023956:78175-78194 | None:intergenic | 35.0% | |
| AATGAAAGAAGATTCGGGTA+CGG | + | tig0023956:78223-78242 | None:intergenic | 35.0% | |
| CGACAAATGAAAGAAGATTC+GGG | + | tig0023956:78228-78247 | None:intergenic | 35.0% | |
| TCAGTTAAATCAGTTGGGAT+TGG | - | tig0023956:78255-78274 | Msa1412820:CDS | 35.0% | |
| AACCAATCATCTCATCCTTA+GGG | + | tig0023956:78285-78304 | None:intergenic | 35.0% | |
| !! | TTGTTTTGTAGAGTTGAGTC+AGG | + | tig0023956:78536-78555 | None:intergenic | 35.0% |
| TGTAAGGTGAAGATTGCATT+AGG | - | tig0023956:78559-78578 | Msa1412820:intron | 35.0% | |
| ! | ATTGTGCTACTACTAACAGA+TGG | - | tig0023956:78742-78761 | Msa1412820:CDS | 35.0% |
| ATGGACAAAGTTACTGTTCT+TGG | - | tig0023956:78761-78780 | Msa1412820:CDS | 35.0% | |
| CTTGAAGAAATTGCAAGAGA+AGG | - | tig0023956:78799-78818 | Msa1412820:CDS | 35.0% | |
| ACAGAACATGAAGAAAAACG+TGG | - | tig0023956:78841-78860 | Msa1412820:CDS | 35.0% | |
| GAAGAAAAACGTGGAATTTG+TGG | - | tig0023956:78850-78869 | Msa1412820:CDS | 35.0% | |
| AATTCTTCTGCAGAATTTGG+TGG | - | tig0023956:78911-78930 | Msa1412820:CDS | 35.0% | |
| GTTCACTGTGAGAAAATCAA+AGG | - | tig0023956:78998-79017 | Msa1412820:CDS | 35.0% | |
| TGAGAAAATCAAAGGAGTTG+TGG | - | tig0023956:79006-79025 | Msa1412820:CDS | 35.0% | |
| CTATTTGTGCAATTTGCAGA+TGG | - | tig0023956:79298-79317 | Msa1412820:intron | 35.0% | |
| ! | GGATATGGAATTTTGCATGA+CGG | - | tig0023956:79319-79338 | Msa1412820:intron | 35.0% |
| ! | ACTTTGGCAGTGACTAATTT+TGG | - | tig0023956:77883-77902 | Msa1412820:intron | 35.0% |
| !!! | TTTTGGAACCATCCAACATT+TGG | - | tig0023956:77900-77919 | Msa1412820:intron | 35.0% |
| AAACATGTGTTTGATCTTGC+AGG | - | tig0023956:78015-78034 | Msa1412820:intron | 35.0% | |
| TTTGATCTTGCAGGAAATGA+TGG | - | tig0023956:78024-78043 | Msa1412820:intron | 35.0% | |
| ! | CACTGATGATGAAGAAATGA+AGG | + | tig0023956:78055-78074 | None:intergenic | 35.0% |
| CTTCATTTCTTCATCATCAG+TGG | - | tig0023956:78053-78072 | Msa1412820:CDS | 35.0% | |
| !! | GAAATTCTAGGGTTGAAGTT+TGG | + | tig0023956:78163-78182 | None:intergenic | 35.0% |
| CTTCAACCCTAGAATTTCAA+TGG | - | tig0023956:78165-78184 | Msa1412820:CDS | 35.0% | |
| GCAGTTTCCATTGAAATTCT+AGG | + | tig0023956:78175-78194 | None:intergenic | 35.0% | |
| AATGAAAGAAGATTCGGGTA+CGG | + | tig0023956:78223-78242 | None:intergenic | 35.0% | |
| CGACAAATGAAAGAAGATTC+GGG | + | tig0023956:78228-78247 | None:intergenic | 35.0% | |
| TCAGTTAAATCAGTTGGGAT+TGG | - | tig0023956:78255-78274 | Msa1412820:CDS | 35.0% | |
| AACCAATCATCTCATCCTTA+GGG | + | tig0023956:78285-78304 | None:intergenic | 35.0% | |
| !! | TTGTTTTGTAGAGTTGAGTC+AGG | + | tig0023956:78536-78555 | None:intergenic | 35.0% |
| TGTAAGGTGAAGATTGCATT+AGG | - | tig0023956:78559-78578 | Msa1412820:intron | 35.0% | |
| ! | ATTGTGCTACTACTAACAGA+TGG | - | tig0023956:78742-78761 | Msa1412820:CDS | 35.0% |
| ATGGACAAAGTTACTGTTCT+TGG | - | tig0023956:78761-78780 | Msa1412820:CDS | 35.0% | |
| CTTGAAGAAATTGCAAGAGA+AGG | - | tig0023956:78799-78818 | Msa1412820:CDS | 35.0% | |
| ACAGAACATGAAGAAAAACG+TGG | - | tig0023956:78841-78860 | Msa1412820:CDS | 35.0% | |
| GAAGAAAAACGTGGAATTTG+TGG | - | tig0023956:78850-78869 | Msa1412820:CDS | 35.0% | |
| AATTCTTCTGCAGAATTTGG+TGG | - | tig0023956:78911-78930 | Msa1412820:CDS | 35.0% | |
| GTTCACTGTGAGAAAATCAA+AGG | - | tig0023956:78998-79017 | Msa1412820:CDS | 35.0% | |
| TGAGAAAATCAAAGGAGTTG+TGG | - | tig0023956:79006-79025 | Msa1412820:CDS | 35.0% | |
| CTATTTGTGCAATTTGCAGA+TGG | - | tig0023956:79298-79317 | Msa1412820:intron | 35.0% | |
| ! | GGATATGGAATTTTGCATGA+CGG | - | tig0023956:79319-79338 | Msa1412820:intron | 35.0% |
| ACTATATGTCTTACCTGCTC+AGG | + | tig0023956:77823-77842 | None:intergenic | 40.0% | |
| TCTCCAAAAGCAGTACCTAT+TGG | + | tig0023956:78112-78131 | None:intergenic | 40.0% | |
| AACCCTAAGGATGAGATGAT+TGG | - | tig0023956:78280-78299 | Msa1412820:CDS | 40.0% | |
| GAACCAATCATCTCATCCTT+AGG | + | tig0023956:78286-78305 | None:intergenic | 40.0% | |
| TCTTCCGACATGATTTCTCA+AGG | - | tig0023956:78325-78344 | Msa1412820:CDS | 40.0% | |
| GGTTCCTTGAGAAATCATGT+CGG | + | tig0023956:78332-78351 | None:intergenic | 40.0% | |
| GATTTCTCAAGGAACCTTTG+AGG | - | tig0023956:78336-78355 | Msa1412820:CDS | 40.0% | |
| TCTTGAGGAAGAGAGAGTTT+AGG | + | tig0023956:78382-78401 | None:intergenic | 40.0% | |
| TTTATGATCTCTGCCTAACG+CGG | - | tig0023956:78583-78602 | Msa1412820:intron | 40.0% | |
| AAAAACTTAAGTCCCGCGTT+AGG | + | tig0023956:78599-78618 | None:intergenic | 40.0% | |
| GAAATTGCAAGAGAAGGTGA+AGG | - | tig0023956:78805-78824 | Msa1412820:CDS | 40.0% | |
| GAAAAACGTGGAATTTGTGG+TGG | - | tig0023956:78853-78872 | Msa1412820:CDS | 40.0% | |
| TCTCACAGTGAACTCTTATG+AGG | + | tig0023956:78991-79010 | None:intergenic | 40.0% | |
| GTGCAATTTGCAGATGGATA+TGG | - | tig0023956:79304-79323 | Msa1412820:intron | 40.0% | |
| AAGACGTAAAAACTGAGCGT+AGG | + | tig0023956:79364-79383 | None:intergenic | 40.0% | |
| ACTATATGTCTTACCTGCTC+AGG | + | tig0023956:77823-77842 | None:intergenic | 40.0% | |
| TCTCCAAAAGCAGTACCTAT+TGG | + | tig0023956:78112-78131 | None:intergenic | 40.0% | |
| AACCCTAAGGATGAGATGAT+TGG | - | tig0023956:78280-78299 | Msa1412820:CDS | 40.0% | |
| GAACCAATCATCTCATCCTT+AGG | + | tig0023956:78286-78305 | None:intergenic | 40.0% | |
| TCTTCCGACATGATTTCTCA+AGG | - | tig0023956:78325-78344 | Msa1412820:CDS | 40.0% | |
| GGTTCCTTGAGAAATCATGT+CGG | + | tig0023956:78332-78351 | None:intergenic | 40.0% | |
| GATTTCTCAAGGAACCTTTG+AGG | - | tig0023956:78336-78355 | Msa1412820:CDS | 40.0% | |
| TCTTGAGGAAGAGAGAGTTT+AGG | + | tig0023956:78382-78401 | None:intergenic | 40.0% | |
| TTTATGATCTCTGCCTAACG+CGG | - | tig0023956:78583-78602 | Msa1412820:intron | 40.0% | |
| AAAAACTTAAGTCCCGCGTT+AGG | + | tig0023956:78599-78618 | None:intergenic | 40.0% | |
| GAAATTGCAAGAGAAGGTGA+AGG | - | tig0023956:78805-78824 | Msa1412820:CDS | 40.0% | |
| GAAAAACGTGGAATTTGTGG+TGG | - | tig0023956:78853-78872 | Msa1412820:CDS | 40.0% | |
| TCTCACAGTGAACTCTTATG+AGG | + | tig0023956:78991-79010 | None:intergenic | 40.0% | |
| GTGCAATTTGCAGATGGATA+TGG | - | tig0023956:79304-79323 | Msa1412820:intron | 40.0% | |
| AAGACGTAAAAACTGAGCGT+AGG | + | tig0023956:79364-79383 | None:intergenic | 40.0% | |
| GATCTTGCAGGAAATGATGG+AGG | - | tig0023956:78027-78046 | Msa1412820:intron | 45.0% | |
| GAGTCTAACTCACTGCCAAT+AGG | - | tig0023956:78094-78113 | Msa1412820:CDS | 45.0% | |
| !! | CTGCCAATAGGTACTGCTTT+TGG | - | tig0023956:78106-78125 | Msa1412820:CDS | 45.0% |
| !! | AGGAACCTTTGAGGCCAAAA+AGG | - | tig0023956:78345-78364 | Msa1412820:CDS | 45.0% |
| !! | TGCTACCTTTTTGGCCTCAA+AGG | + | tig0023956:78353-78372 | None:intergenic | 45.0% |
| !! | AGGACGTGTTGCTACCTTTT+TGG | + | tig0023956:78362-78381 | None:intergenic | 45.0% |
| AAGATAGAGCAATGAAGCGC+TGG | + | tig0023956:78444-78463 | None:intergenic | 45.0% | |
| ! | CTTTTGTAGTCCGGGAACAA+GGG | + | tig0023956:78467-78486 | None:intergenic | 45.0% |
| TTATGATCTCTGCCTAACGC+GGG | - | tig0023956:78584-78603 | Msa1412820:intron | 45.0% | |
| AGAGAAGGTGAAGGTTCTTG+AGG | - | tig0023956:78814-78833 | Msa1412820:CDS | 45.0% | |
| ! | GGAATTTTGCATGACGGTGA+AGG | - | tig0023956:79325-79344 | Msa1412820:intron | 45.0% |
| GATCTTGCAGGAAATGATGG+AGG | - | tig0023956:78027-78046 | Msa1412820:intron | 45.0% | |
| GAGTCTAACTCACTGCCAAT+AGG | - | tig0023956:78094-78113 | Msa1412820:CDS | 45.0% | |
| !! | CTGCCAATAGGTACTGCTTT+TGG | - | tig0023956:78106-78125 | Msa1412820:CDS | 45.0% |
| !! | AGGAACCTTTGAGGCCAAAA+AGG | - | tig0023956:78345-78364 | Msa1412820:CDS | 45.0% |
| !! | TGCTACCTTTTTGGCCTCAA+AGG | + | tig0023956:78353-78372 | None:intergenic | 45.0% |
| !! | AGGACGTGTTGCTACCTTTT+TGG | + | tig0023956:78362-78381 | None:intergenic | 45.0% |
| AAGATAGAGCAATGAAGCGC+TGG | + | tig0023956:78444-78463 | None:intergenic | 45.0% | |
| ! | CTTTTGTAGTCCGGGAACAA+GGG | + | tig0023956:78467-78486 | None:intergenic | 45.0% |
| TTATGATCTCTGCCTAACGC+GGG | - | tig0023956:78584-78603 | Msa1412820:intron | 45.0% | |
| AGAGAAGGTGAAGGTTCTTG+AGG | - | tig0023956:78814-78833 | Msa1412820:CDS | 45.0% | |
| ! | GGAATTTTGCATGACGGTGA+AGG | - | tig0023956:79325-79344 | Msa1412820:intron | 45.0% |
| TATCAGAGGGTTTCCTGAGC+AGG | - | tig0023956:77807-77826 | Msa1412820:CDS | 50.0% | |
| ! | GTTGGGATTGGTGAACCCTA+AGG | - | tig0023956:78267-78286 | Msa1412820:CDS | 50.0% |
| GCTCTATCTTCCCTTGTTCC+CGG | - | tig0023956:78454-78473 | Msa1412820:intron | 50.0% | |
| ! | CCTTTTGTAGTCCGGGAACA+AGG | + | tig0023956:78468-78487 | None:intergenic | 50.0% |
| CCTTGTTCCCGGACTACAAA+AGG | - | tig0023956:78465-78484 | Msa1412820:intron | 50.0% | |
| GAAGGTGAAGGTTCTTGAGG+AGG | - | tig0023956:78817-78836 | Msa1412820:CDS | 50.0% | |
| ! | ATTTGGTGGTCCCTTTGACG+AGG | - | tig0023956:78925-78944 | Msa1412820:CDS | 50.0% |
| TCTGGCAGTTCCTCGTCAAA+GGG | + | tig0023956:78938-78957 | None:intergenic | 50.0% | |
| TTCTGGCAGTTCCTCGTCAA+AGG | + | tig0023956:78939-78958 | None:intergenic | 50.0% | |
| TATCAGAGGGTTTCCTGAGC+AGG | - | tig0023956:77807-77826 | Msa1412820:CDS | 50.0% | |
| ! | GTTGGGATTGGTGAACCCTA+AGG | - | tig0023956:78267-78286 | Msa1412820:CDS | 50.0% |
| GCTCTATCTTCCCTTGTTCC+CGG | - | tig0023956:78454-78473 | Msa1412820:intron | 50.0% | |
| ! | CCTTTTGTAGTCCGGGAACA+AGG | + | tig0023956:78468-78487 | None:intergenic | 50.0% |
| CCTTGTTCCCGGACTACAAA+AGG | - | tig0023956:78465-78484 | Msa1412820:intron | 50.0% | |
| GAAGGTGAAGGTTCTTGAGG+AGG | - | tig0023956:78817-78836 | Msa1412820:CDS | 50.0% | |
| ! | ATTTGGTGGTCCCTTTGACG+AGG | - | tig0023956:78925-78944 | Msa1412820:CDS | 50.0% |
| TCTGGCAGTTCCTCGTCAAA+GGG | + | tig0023956:78938-78957 | None:intergenic | 50.0% | |
| TTCTGGCAGTTCCTCGTCAA+AGG | + | tig0023956:78939-78958 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023956 | gene | 77790 | 79391 | 77790 | ID=Msa1412820;Name=Msa1412820 |
| tig0023956 | mRNA | 77790 | 79391 | 77790 | ID=Msa1412820-mRNA-1;Parent=Msa1412820;Name=Msa1412820-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|4|0|310 |
| tig0023956 | exon | 79353 | 79391 | 79353 | ID=Msa1412820-mRNA-1:exon:20826;Parent=Msa1412820-mRNA-1 |
| tig0023956 | exon | 78695 | 79144 | 78695 | ID=Msa1412820-mRNA-1:exon:20825;Parent=Msa1412820-mRNA-1 |
| tig0023956 | exon | 78052 | 78420 | 78052 | ID=Msa1412820-mRNA-1:exon:20824;Parent=Msa1412820-mRNA-1 |
| tig0023956 | exon | 77790 | 77864 | 77790 | ID=Msa1412820-mRNA-1:exon:20823;Parent=Msa1412820-mRNA-1 |
| tig0023956 | CDS | 79353 | 79391 | 79353 | ID=Msa1412820-mRNA-1:cds;Parent=Msa1412820-mRNA-1 |
| tig0023956 | CDS | 78695 | 79144 | 78695 | ID=Msa1412820-mRNA-1:cds;Parent=Msa1412820-mRNA-1 |
| tig0023956 | CDS | 78052 | 78420 | 78052 | ID=Msa1412820-mRNA-1:cds;Parent=Msa1412820-mRNA-1 |
| tig0023956 | CDS | 77790 | 77864 | 77790 | ID=Msa1412820-mRNA-1:cds;Parent=Msa1412820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
