Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418670 | sp|Q6NNP0|ATG16_ARATH | 67.066 | 167 | 55 | 0 | 8 | 174 | 3 | 169 | 2.76e-72 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418670 | A0A072UPU7 | 97.701 | 174 | 4 | 0 | 1 | 174 | 1 | 174 | 1.78e-113 | 341 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1369780 | Msa1418670 | 0.809211 | 2.117142e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418670 | MtrunA17_Chr4g0058091 | 97.701 | 174 | 4 | 0 | 1 | 174 | 1 | 174 | 3.82e-117 | 341 |
| Msa1418670 | MtrunA17_Chr4g0001841 | 78.621 | 145 | 7 | 1 | 30 | 174 | 20 | 140 | 7.56e-71 | 215 |
| Msa1418670 | MtrunA17_Chr3g0116561 | 67.857 | 168 | 54 | 0 | 7 | 174 | 2 | 169 | 2.14e-67 | 213 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418670 | AT5G50230.1 | 67.066 | 167 | 55 | 0 | 8 | 174 | 3 | 169 | 2.80e-73 | 229 |
Find 27 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGAATTGATCACTAAATT+AGG | 0.120625 | tig0024623:-76680 | None:intergenic |
| ACCATTGTTGTTGTTGTGTT+TGG | 0.308418 | tig0024623:-76705 | None:intergenic |
| GATTGTATTATACCTCATTT+AGG | 0.316444 | tig0024623:-78029 | None:intergenic |
| CAGAATTGATCACTAAATTA+GGG | 0.329052 | tig0024623:-76679 | None:intergenic |
| CTCTCAATTAAAGACAGATT+TGG | 0.339284 | tig0024623:+77852 | Msa1418670:CDS |
| TCAATCGCAACTTGTTCTTT+CGG | 0.343457 | tig0024623:-76741 | None:intergenic |
| ACAACAACAATGGTGAAAAC+TGG | 0.379287 | tig0024623:+76714 | Msa1418670:exon |
| TTCAGAACTAAAAGCACAAC+TGG | 0.383721 | tig0024623:+77915 | Msa1418670:CDS |
| GAAAGAGAAAGCAGAGAACT+TGG | 0.396574 | tig0024623:+77372 | Msa1418670:CDS |
| TTCTAGACCCATCGTTTCTC+AGG | 0.404660 | tig0024623:+76845 | Msa1418670:CDS |
| CTAGAAAGTGCGAGAAAAGC+AGG | 0.474966 | tig0024623:-76828 | None:intergenic |
| AGACTAGAGAGACCGAAAAT+AGG | 0.486000 | tig0024623:-76623 | None:intergenic |
| GAAAGCAGAGAACTTGGAAG+TGG | 0.488324 | tig0024623:+77378 | Msa1418670:CDS |
| AAACGCCATCTTCTCGAAGA+AGG | 0.507490 | tig0024623:+76795 | Msa1418670:CDS |
| GAGCGCCTTCTTCGAGAAGA+TGG | 0.521377 | tig0024623:-76800 | None:intergenic |
| TACTTCCACAACAAGTTGCT+CGG | 0.529307 | tig0024623:-77437 | None:intergenic |
| AGAAGGAGTTGACAGAATTG+AGG | 0.554456 | tig0024623:+77521 | Msa1418670:CDS |
| TGCAATTTCTGATATGCAGA+AGG | 0.560064 | tig0024623:+77504 | Msa1418670:CDS |
| CTTGATGTTAGAAAAGATGA+AGG | 0.562481 | tig0024623:+77996 | Msa1418670:CDS |
| GTTATCCGAGCAACTTGTTG+TGG | 0.566280 | tig0024623:+77432 | Msa1418670:CDS |
| GGATGCTGAACGCCTAAATG+AGG | 0.592570 | tig0024623:+78017 | Msa1418670:CDS |
| AATGCTATAAAGCTCAATCT+CGG | 0.592904 | tig0024623:+77410 | Msa1418670:CDS |
| ATGATCTACTTATTTGTACG+TGG | 0.604095 | tig0024623:+76598 | Msa1418670:five_prime_UTR |
| TGATCTACTTATTTGTACGT+GGG | 0.620905 | tig0024623:+76599 | Msa1418670:five_prime_UTR |
| ACCAAACACAACAACAACAA+TGG | 0.632413 | tig0024623:+76704 | Msa1418670:exon |
| GGTACGTACCTGAGAAACGA+TGG | 0.636424 | tig0024623:-76853 | None:intergenic |
| GTACGTACCTGAGAAACGAT+GGG | 0.661026 | tig0024623:-76852 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACAATTTTCATTTTTTTT+AGG | + | tig0024623:76883-76902 | Msa1418670:intron | 10.0% |
| !!! | AACAATTTTCATTTTTTTTA+GGG | + | tig0024623:76884-76903 | Msa1418670:intron | 10.0% |
| !!! | TAACAATTTTCATTTTTTTT+AGG | + | tig0024623:76883-76902 | Msa1418670:intron | 10.0% |
| !!! | AACAATTTTCATTTTTTTTA+GGG | + | tig0024623:76884-76903 | Msa1418670:intron | 10.0% |
| !! | AATGAAAATTGTTAATGAAA+GGG | - | tig0024623:76877-76896 | None:intergenic | 15.0% |
| !! | AAATGAAAATTGTTAATGAA+AGG | - | tig0024623:76878-76897 | None:intergenic | 15.0% |
| !! | AGGAAACAATAAAAAAAAAA+TGG | - | tig0024623:76944-76963 | None:intergenic | 15.0% |
| !! | AATGAAAATTGTTAATGAAA+GGG | - | tig0024623:76877-76896 | None:intergenic | 15.0% |
| !! | AAATGAAAATTGTTAATGAA+AGG | - | tig0024623:76878-76897 | None:intergenic | 15.0% |
| !! | AGGAAACAATAAAAAAAAAA+TGG | - | tig0024623:76944-76963 | None:intergenic | 15.0% |
| !!! | TTTTATTGTTTCCTTTATTG+TGG | + | tig0024623:76950-76969 | Msa1418670:intron | 20.0% |
| !! | ATGATTGAACTAATTTCTTA+CGG | - | tig0024623:76978-76997 | None:intergenic | 20.0% |
| !!! | TTTTATTGTTTCCTTTATTG+TGG | + | tig0024623:76950-76969 | Msa1418670:intron | 20.0% |
| !! | ATGATTGAACTAATTTCTTA+CGG | - | tig0024623:76978-76997 | None:intergenic | 20.0% |
| ! | CAGAATTGATCACTAAATTA+GGG | - | tig0024623:76682-76701 | None:intergenic | 25.0% |
| ! | TCAGAATTGATCACTAAATT+AGG | - | tig0024623:76683-76702 | None:intergenic | 25.0% |
| ! | TAATTCAATGTGATCACATA+TGG | - | tig0024623:77109-77128 | None:intergenic | 25.0% |
| ! | TAACTTTGCACAGTTAAAAT+AGG | - | tig0024623:77202-77221 | None:intergenic | 25.0% |
| !!! | TTTTAACTGTGCAAAGTTAT+TGG | + | tig0024623:77203-77222 | Msa1418670:intron | 25.0% |
| ! | TGATGTATTTATGTTGTTGA+AGG | + | tig0024623:77339-77358 | Msa1418670:intron | 25.0% |
| ! | GATGTATTTATGTTGTTGAA+GGG | + | tig0024623:77340-77359 | Msa1418670:intron | 25.0% |
| ! | AAATTAATGTTGCAAAATGC+AGG | + | tig0024623:77821-77840 | Msa1418670:intron | 25.0% |
| ! | AATTAATGTTGCAAAATGCA+GGG | + | tig0024623:77822-77841 | Msa1418670:intron | 25.0% |
| ! | CAGAATTGATCACTAAATTA+GGG | - | tig0024623:76682-76701 | None:intergenic | 25.0% |
| ! | TCAGAATTGATCACTAAATT+AGG | - | tig0024623:76683-76702 | None:intergenic | 25.0% |
| ! | TAATTCAATGTGATCACATA+TGG | - | tig0024623:77109-77128 | None:intergenic | 25.0% |
| ! | TAACTTTGCACAGTTAAAAT+AGG | - | tig0024623:77202-77221 | None:intergenic | 25.0% |
| !!! | TTTTAACTGTGCAAAGTTAT+TGG | + | tig0024623:77203-77222 | Msa1418670:intron | 25.0% |
| ! | TGATGTATTTATGTTGTTGA+AGG | + | tig0024623:77339-77358 | Msa1418670:intron | 25.0% |
| ! | GATGTATTTATGTTGTTGAA+GGG | + | tig0024623:77340-77359 | Msa1418670:intron | 25.0% |
| ! | AAATTAATGTTGCAAAATGC+AGG | + | tig0024623:77821-77840 | Msa1418670:intron | 25.0% |
| ! | AATTAATGTTGCAAAATGCA+GGG | + | tig0024623:77822-77841 | Msa1418670:intron | 25.0% |
| ATGATCTACTTATTTGTACG+TGG | + | tig0024623:76598-76617 | Msa1418670:five_prime_UTR | 30.0% | |
| TGATCTACTTATTTGTACGT+GGG | + | tig0024623:76599-76618 | Msa1418670:five_prime_UTR | 30.0% | |
| !! | TTCTGATTCGAATGATTTTC+AGG | - | tig0024623:76652-76671 | None:intergenic | 30.0% |
| ! | ACTACTAAGCACTATTCTTT+TGG | - | tig0024623:77006-77025 | None:intergenic | 30.0% |
| AATGCTATAAAGCTCAATCT+CGG | + | tig0024623:77410-77429 | Msa1418670:CDS | 30.0% | |
| ! | TGCATTTTCTTTCTCTTGAA+GGG | - | tig0024623:77488-77507 | None:intergenic | 30.0% |
| ! | TTGCATTTTCTTTCTCTTGA+AGG | - | tig0024623:77489-77508 | None:intergenic | 30.0% |
| ! | TAGCTGCTATTTAACAACAT+TGG | - | tig0024623:77574-77593 | None:intergenic | 30.0% |
| CAAATTCTGCTATGGTATAA+CGG | - | tig0024623:77602-77621 | None:intergenic | 30.0% | |
| AGTGTATCTTGAAACTATAG+CGG | - | tig0024623:77631-77650 | None:intergenic | 30.0% | |
| TACAAAATGTTGTCCAATAG+CGG | + | tig0024623:77657-77676 | Msa1418670:intron | 30.0% | |
| ACTAAAAAAAATGTTGGTCG+CGG | - | tig0024623:77776-77795 | None:intergenic | 30.0% | |
| TCGCAGACTAAAAAAAATGT+TGG | - | tig0024623:77782-77801 | None:intergenic | 30.0% | |
| CTCTCAATTAAAGACAGATT+TGG | + | tig0024623:77852-77871 | Msa1418670:CDS | 30.0% | |
| ! | TCATCTTTTCTAACATCAAG+CGG | - | tig0024623:77996-78015 | None:intergenic | 30.0% |
| CTTGATGTTAGAAAAGATGA+AGG | + | tig0024623:77996-78015 | Msa1418670:CDS | 30.0% | |
| ATGATCTACTTATTTGTACG+TGG | + | tig0024623:76598-76617 | Msa1418670:five_prime_UTR | 30.0% | |
| TGATCTACTTATTTGTACGT+GGG | + | tig0024623:76599-76618 | Msa1418670:five_prime_UTR | 30.0% | |
| !! | TTCTGATTCGAATGATTTTC+AGG | - | tig0024623:76652-76671 | None:intergenic | 30.0% |
| ! | ACTACTAAGCACTATTCTTT+TGG | - | tig0024623:77006-77025 | None:intergenic | 30.0% |
| AATGCTATAAAGCTCAATCT+CGG | + | tig0024623:77410-77429 | Msa1418670:CDS | 30.0% | |
| ! | TGCATTTTCTTTCTCTTGAA+GGG | - | tig0024623:77488-77507 | None:intergenic | 30.0% |
| ! | TTGCATTTTCTTTCTCTTGA+AGG | - | tig0024623:77489-77508 | None:intergenic | 30.0% |
| ! | TAGCTGCTATTTAACAACAT+TGG | - | tig0024623:77574-77593 | None:intergenic | 30.0% |
| CAAATTCTGCTATGGTATAA+CGG | - | tig0024623:77602-77621 | None:intergenic | 30.0% | |
| AGTGTATCTTGAAACTATAG+CGG | - | tig0024623:77631-77650 | None:intergenic | 30.0% | |
| TACAAAATGTTGTCCAATAG+CGG | + | tig0024623:77657-77676 | Msa1418670:intron | 30.0% | |
| ACTAAAAAAAATGTTGGTCG+CGG | - | tig0024623:77776-77795 | None:intergenic | 30.0% | |
| TCGCAGACTAAAAAAAATGT+TGG | - | tig0024623:77782-77801 | None:intergenic | 30.0% | |
| CTCTCAATTAAAGACAGATT+TGG | + | tig0024623:77852-77871 | Msa1418670:CDS | 30.0% | |
| ! | TCATCTTTTCTAACATCAAG+CGG | - | tig0024623:77996-78015 | None:intergenic | 30.0% |
| CTTGATGTTAGAAAAGATGA+AGG | + | tig0024623:77996-78015 | Msa1418670:CDS | 30.0% | |
| !! | TGATTCGAATGATTTTCAGG+TGG | - | tig0024623:76649-76668 | None:intergenic | 35.0% |
| ACCAAACACAACAACAACAA+TGG | + | tig0024623:76704-76723 | Msa1418670:exon | 35.0% | |
| ! | ACCATTGTTGTTGTTGTGTT+TGG | - | tig0024623:76708-76727 | None:intergenic | 35.0% |
| ACAACAACAATGGTGAAAAC+TGG | + | tig0024623:76714-76733 | Msa1418670:exon | 35.0% | |
| ! | TCAATCGCAACTTGTTCTTT+CGG | - | tig0024623:76744-76763 | None:intergenic | 35.0% |
| TTCTTACGGATCCACAATAA+AGG | - | tig0024623:76964-76983 | None:intergenic | 35.0% | |
| ACTTCTGATTGAATGTGTGT+TGG | + | tig0024623:77055-77074 | Msa1418670:intron | 35.0% | |
| TTCAGAATGTTGCTCGATAT+TGG | + | tig0024623:77244-77263 | Msa1418670:intron | 35.0% | |
| !!! | AGCTTTTGAAACTCTAGACT+CGG | - | tig0024623:77464-77483 | None:intergenic | 35.0% |
| TGCAATTTCTGATATGCAGA+AGG | + | tig0024623:77504-77523 | Msa1418670:CDS | 35.0% | |
| CGTTATACCATAGCAGAATT+TGG | + | tig0024623:77600-77619 | Msa1418670:intron | 35.0% | |
| TCGAGAATAGCAGAAAATAG+TGG | - | tig0024623:77734-77753 | None:intergenic | 35.0% | |
| CTATTCTCGATTGACAACAT+TGG | + | tig0024623:77744-77763 | Msa1418670:intron | 35.0% | |
| ! | TTCAGAACTAAAAGCACAAC+TGG | + | tig0024623:77915-77934 | Msa1418670:CDS | 35.0% |
| !! | TGATTCGAATGATTTTCAGG+TGG | - | tig0024623:76649-76668 | None:intergenic | 35.0% |
| ACCAAACACAACAACAACAA+TGG | + | tig0024623:76704-76723 | Msa1418670:exon | 35.0% | |
| ! | ACCATTGTTGTTGTTGTGTT+TGG | - | tig0024623:76708-76727 | None:intergenic | 35.0% |
| ACAACAACAATGGTGAAAAC+TGG | + | tig0024623:76714-76733 | Msa1418670:exon | 35.0% | |
| ! | TCAATCGCAACTTGTTCTTT+CGG | - | tig0024623:76744-76763 | None:intergenic | 35.0% |
| TTCTTACGGATCCACAATAA+AGG | - | tig0024623:76964-76983 | None:intergenic | 35.0% | |
| ACTTCTGATTGAATGTGTGT+TGG | + | tig0024623:77055-77074 | Msa1418670:intron | 35.0% | |
| TTCAGAATGTTGCTCGATAT+TGG | + | tig0024623:77244-77263 | Msa1418670:intron | 35.0% | |
| !!! | AGCTTTTGAAACTCTAGACT+CGG | - | tig0024623:77464-77483 | None:intergenic | 35.0% |
| TGCAATTTCTGATATGCAGA+AGG | + | tig0024623:77504-77523 | Msa1418670:CDS | 35.0% | |
| CGTTATACCATAGCAGAATT+TGG | + | tig0024623:77600-77619 | Msa1418670:intron | 35.0% | |
| TCGAGAATAGCAGAAAATAG+TGG | - | tig0024623:77734-77753 | None:intergenic | 35.0% | |
| CTATTCTCGATTGACAACAT+TGG | + | tig0024623:77744-77763 | Msa1418670:intron | 35.0% | |
| ! | TTCAGAACTAAAAGCACAAC+TGG | + | tig0024623:77915-77934 | Msa1418670:CDS | 35.0% |
| ! | TTGTACGTGGGACCTATTTT+CGG | + | tig0024623:76611-76630 | Msa1418670:five_prime_UTR | 40.0% |
| AGACTAGAGAGACCGAAAAT+AGG | - | tig0024623:76626-76645 | None:intergenic | 40.0% | |
| GTTATTAACTCTTGTAGCGC+CGG | + | tig0024623:77031-77050 | Msa1418670:intron | 40.0% | |
| ! | ACACATTCAATCAGAAGTGC+CGG | - | tig0024623:77053-77072 | None:intergenic | 40.0% |
| !! | GCTCGATATTGGTGTTAAGT+TGG | + | tig0024623:77255-77274 | Msa1418670:intron | 40.0% |
| !! | TTGGTGTTAAGTTGGTTGCT+TGG | + | tig0024623:77263-77282 | Msa1418670:intron | 40.0% |
| TTGGTTGCTTGGATAGTTGA+TGG | + | tig0024623:77274-77293 | Msa1418670:intron | 40.0% | |
| !!! | TGTTGTTGAAGGGTTTTGAG+TGG | + | tig0024623:77350-77369 | Msa1418670:intron | 40.0% |
| GAAAGAGAAAGCAGAGAACT+TGG | + | tig0024623:77372-77391 | Msa1418670:CDS | 40.0% | |
| TACTTCCACAACAAGTTGCT+CGG | - | tig0024623:77440-77459 | None:intergenic | 40.0% | |
| AGAAGGAGTTGACAGAATTG+AGG | + | tig0024623:77521-77540 | Msa1418670:CDS | 40.0% | |
| GGTTTGTCCAAATTCTGCTA+TGG | - | tig0024623:77610-77629 | None:intergenic | 40.0% | |
| GCTATAGCACTATTGTGTAG+CGG | + | tig0024623:77696-77715 | Msa1418670:intron | 40.0% | |
| ! | TTGTACGTGGGACCTATTTT+CGG | + | tig0024623:76611-76630 | Msa1418670:five_prime_UTR | 40.0% |
| AGACTAGAGAGACCGAAAAT+AGG | - | tig0024623:76626-76645 | None:intergenic | 40.0% | |
| GTTATTAACTCTTGTAGCGC+CGG | + | tig0024623:77031-77050 | Msa1418670:intron | 40.0% | |
| ! | ACACATTCAATCAGAAGTGC+CGG | - | tig0024623:77053-77072 | None:intergenic | 40.0% |
| !! | GCTCGATATTGGTGTTAAGT+TGG | + | tig0024623:77255-77274 | Msa1418670:intron | 40.0% |
| !! | TTGGTGTTAAGTTGGTTGCT+TGG | + | tig0024623:77263-77282 | Msa1418670:intron | 40.0% |
| TTGGTTGCTTGGATAGTTGA+TGG | + | tig0024623:77274-77293 | Msa1418670:intron | 40.0% | |
| !!! | TGTTGTTGAAGGGTTTTGAG+TGG | + | tig0024623:77350-77369 | Msa1418670:intron | 40.0% |
| GAAAGAGAAAGCAGAGAACT+TGG | + | tig0024623:77372-77391 | Msa1418670:CDS | 40.0% | |
| TACTTCCACAACAAGTTGCT+CGG | - | tig0024623:77440-77459 | None:intergenic | 40.0% | |
| AGAAGGAGTTGACAGAATTG+AGG | + | tig0024623:77521-77540 | Msa1418670:CDS | 40.0% | |
| GGTTTGTCCAAATTCTGCTA+TGG | - | tig0024623:77610-77629 | None:intergenic | 40.0% | |
| GCTATAGCACTATTGTGTAG+CGG | + | tig0024623:77696-77715 | Msa1418670:intron | 40.0% | |
| AAACGCCATCTTCTCGAAGA+AGG | + | tig0024623:76795-76814 | Msa1418670:CDS | 45.0% | |
| ! | CTAGAAAGTGCGAGAAAAGC+AGG | - | tig0024623:76831-76850 | None:intergenic | 45.0% |
| TTCTAGACCCATCGTTTCTC+AGG | + | tig0024623:76845-76864 | Msa1418670:CDS | 45.0% | |
| GTACGTACCTGAGAAACGAT+GGG | - | tig0024623:76855-76874 | None:intergenic | 45.0% | |
| ! | TGTTGGTGTCTGACATGTGT+CGG | + | tig0024623:77072-77091 | Msa1418670:intron | 45.0% |
| GAAAGCAGAGAACTTGGAAG+TGG | + | tig0024623:77378-77397 | Msa1418670:CDS | 45.0% | |
| !! | GTTATCCGAGCAACTTGTTG+TGG | + | tig0024623:77432-77451 | Msa1418670:CDS | 45.0% |
| TTGTCCAATAGCGGCTATAG+TGG | + | tig0024623:77666-77685 | Msa1418670:intron | 45.0% | |
| AAACGCCATCTTCTCGAAGA+AGG | + | tig0024623:76795-76814 | Msa1418670:CDS | 45.0% | |
| ! | CTAGAAAGTGCGAGAAAAGC+AGG | - | tig0024623:76831-76850 | None:intergenic | 45.0% |
| TTCTAGACCCATCGTTTCTC+AGG | + | tig0024623:76845-76864 | Msa1418670:CDS | 45.0% | |
| GTACGTACCTGAGAAACGAT+GGG | - | tig0024623:76855-76874 | None:intergenic | 45.0% | |
| ! | TGTTGGTGTCTGACATGTGT+CGG | + | tig0024623:77072-77091 | Msa1418670:intron | 45.0% |
| GAAAGCAGAGAACTTGGAAG+TGG | + | tig0024623:77378-77397 | Msa1418670:CDS | 45.0% | |
| !! | GTTATCCGAGCAACTTGTTG+TGG | + | tig0024623:77432-77451 | Msa1418670:CDS | 45.0% |
| TTGTCCAATAGCGGCTATAG+TGG | + | tig0024623:77666-77685 | Msa1418670:intron | 45.0% | |
| GGTACGTACCTGAGAAACGA+TGG | - | tig0024623:76856-76875 | None:intergenic | 50.0% | |
| AGCACCACTATAGCCGCTAT+TGG | - | tig0024623:77673-77692 | None:intergenic | 50.0% | |
| GGTACGTACCTGAGAAACGA+TGG | - | tig0024623:76856-76875 | None:intergenic | 50.0% | |
| AGCACCACTATAGCCGCTAT+TGG | - | tig0024623:77673-77692 | None:intergenic | 50.0% | |
| GAGCGCCTTCTTCGAGAAGA+TGG | - | tig0024623:76803-76822 | None:intergenic | 55.0% | |
| GAGCGCCTTCTTCGAGAAGA+TGG | - | tig0024623:76803-76822 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024623 | gene | 76591 | 78038 | 76591 | ID=Msa1418670;Name=Msa1418670 |
| tig0024623 | mRNA | 76591 | 78038 | 76591 | ID=Msa1418670-mRNA-1;Parent=Msa1418670;Name=Msa1418670-mRNA-1;_AED=0.13;_eAED=0.13;_QI=132|1|0.66|1|1|1|3|0|174 |
| tig0024623 | exon | 76591 | 76866 | 76591 | ID=Msa1418670-mRNA-1:exon:449;Parent=Msa1418670-mRNA-1 |
| tig0024623 | exon | 77361 | 77542 | 77361 | ID=Msa1418670-mRNA-1:exon:450;Parent=Msa1418670-mRNA-1 |
| tig0024623 | exon | 77843 | 78038 | 77843 | ID=Msa1418670-mRNA-1:exon:451;Parent=Msa1418670-mRNA-1 |
| tig0024623 | five_prime_UTR | 76591 | 76722 | 76591 | ID=Msa1418670-mRNA-1:five_prime_utr;Parent=Msa1418670-mRNA-1 |
| tig0024623 | CDS | 76723 | 76866 | 76723 | ID=Msa1418670-mRNA-1:cds;Parent=Msa1418670-mRNA-1 |
| tig0024623 | CDS | 77361 | 77542 | 77361 | ID=Msa1418670-mRNA-1:cds;Parent=Msa1418670-mRNA-1 |
| tig0024623 | CDS | 77843 | 78038 | 77843 | ID=Msa1418670-mRNA-1:cds;Parent=Msa1418670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
