AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1419190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1419190 MtrunA17_Chr4g0011741 92.959 980 66 3 26 1003 1 979 0.0 1786
Msa1419190 MtrunA17_Chr6g0472201 51.942 412 170 5 562 967 29 418 1.79e-140 427
Msa1419190 MtrunA17_Chr3g0096851 57.377 244 96 2 562 800 29 269 9.24e-96 304
Msa1419190 MtrunA17_Chr7g0226581 68.900 209 57 2 722 930 1 201 6.57e-89 286
Msa1419190 MtrunA17_Chr5g0409781 77.519 129 29 0 634 762 47 175 7.05e-67 222
Msa1419190 MtrunA17_Chr2g0306531 41.270 189 89 6 748 930 2 174 2.72e-32 125
Msa1419190 MtrunA17_Chr2g0306521 46.316 95 50 1 585 678 236 330 2.58e-23 102
Msa1419190 MtrunA17_Chr7g0226591 41.007 139 62 5 202 327 62 193 6.14e-16 77.8
Msa1419190 MtrunA17_Chr7g0226591 44.928 138 55 7 471 594 70 200 4.83e-14 72.0
Msa1419190 MtrunA17_Chr2g0305311 24.308 325 220 10 619 939 183 485 2.79e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1419190 AT1G40087.1 27.037 270 171 9 620 867 73 338 1.13e-18 90.1
Msa1419190 AT3G30200.1 26.667 270 176 8 616 867 193 458 1.17e-18 91.3

Find 188 sgRNAs with CRISPR-Local

Find 447 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGCTCCCCTTCTTCATTTA+AGG 0.093712 tig0024677:+59035 None:intergenic
AACATCCACTTTATACTTTC+TGG 0.100460 tig0024677:+60757 None:intergenic
TTGAATCACAAAGGTGATTT+TGG 0.177757 tig0024677:-56814 Msa1419190:three_prime_UTR
TATCACAATGAAAGTAAATA+AGG 0.196877 tig0024677:-63743 Msa1419190:CDS
CATTGATGATTTCAGGAAAT+TGG 0.204677 tig0024677:-58519 Msa1419190:intron
GTCCTCTTACTTACACTAAT+TGG 0.212199 tig0024677:-58939 Msa1419190:CDS
CATATATTCTCCTTCTTCTT+TGG 0.215996 tig0024677:+58907 None:intergenic
TAGGAAATTAATGATTTATT+GGG 0.227619 tig0024677:-58630 Msa1419190:CDS
CCATGGCAGCGCACTCTTCC+AGG 0.230720 tig0024677:+57794 None:intergenic
AAAACTTACAATTGTGTTAC+TGG 0.234856 tig0024677:+57973 None:intergenic
GCCCATTATTGTGGTCATTT+GGG 0.242734 tig0024677:+57522 None:intergenic
TTAGGAAATTAATGATTTAT+TGG 0.243216 tig0024677:-58631 Msa1419190:CDS
CCTTATGATAGCAAAGCTTA+TGG 0.259101 tig0024677:+58443 None:intergenic
CACGATCGACAAGGTCCTTT+TGG 0.259459 tig0024677:+61891 None:intergenic
AGCCCATTATTGTGGTCATT+TGG 0.275452 tig0024677:+57521 None:intergenic
TTGAAAAGAAGTAAAGAAAT+TGG 0.277839 tig0024677:-57749 Msa1419190:CDS
AGATACATTGTTCCTGAAAA+AGG 0.278882 tig0024677:-58791 Msa1419190:CDS
GGAAATTGCAAGTTCTTCTA+AGG 0.286199 tig0024677:-57607 Msa1419190:CDS
GATAAGAACACAAACCTTAT+AGG 0.293069 tig0024677:-57028 Msa1419190:three_prime_UTR
ACCGATGTAAACATCATCTT+TGG 0.298416 tig0024677:+63445 None:intergenic
CAAAGAAGAAGGAGAATATA+TGG 0.298681 tig0024677:-58906 Msa1419190:CDS
GCAAAGTTCTAGTTTAAATC+AGG 0.322392 tig0024677:-63105 Msa1419190:CDS
GATTCTATTATCAACCTATA+AGG 0.323753 tig0024677:+57014 None:intergenic
ACCCCAAATGACCACAATAA+TGG 0.333226 tig0024677:-57524 Msa1419190:CDS
ACCTTCCATTGGATTGTCAT+TGG 0.333646 tig0024677:+59694 None:intergenic
GCCACTTGGATTGAACTTCC+AGG 0.341080 tig0024677:+62813 None:intergenic
CAATTGTGTTACTGGTAACT+TGG 0.347417 tig0024677:+57981 None:intergenic
CAAGATTTGATCGTAAATTC+TGG 0.349141 tig0024677:-57863 Msa1419190:CDS
AGTGACACTGAGGGAATCTT+TGG 0.349893 tig0024677:+61842 None:intergenic
TATCTTGGTCTGAATTGCTT+TGG 0.356836 tig0024677:+57573 None:intergenic
AATTTCCTAAAGTCTGCTTC+TGG 0.359358 tig0024677:+58644 None:intergenic
CCCCAAATGACCACAATAAT+GGG 0.360164 tig0024677:-57523 Msa1419190:CDS
CAAGAGGACCTTGTTGATCA+TGG 0.361988 tig0024677:-59875 Msa1419190:CDS
AACATACCTCATCATTATTT+AGG 0.362058 tig0024677:+57474 None:intergenic
CCTTTGGTCATTCTTTAGAA+TGG 0.364604 tig0024677:+62854 None:intergenic
TCAATGATTGTTGTATCCTT+TGG 0.381600 tig0024677:+62838 None:intergenic
CTTATGATAGCAAAGCTTAT+GGG 0.385281 tig0024677:+58444 None:intergenic
GCAGAGGACTTTGTAATGTC+TGG 0.390946 tig0024677:+63179 None:intergenic
AAGCAATTCAGACCAAGATA+TGG 0.396175 tig0024677:-57570 Msa1419190:CDS
CGTTTGATCATGCTTGAGAA+TGG 0.397941 tig0024677:+63004 None:intergenic
GTAGGGGTGTTACCTTTCAT+TGG 0.400408 tig0024677:+61686 None:intergenic
ACCTTTGTGATTCAACAATC+TGG 0.402367 tig0024677:+56822 None:intergenic
CGTAAATTCTGGTCAGTCTT+CGG 0.402447 tig0024677:-57852 Msa1419190:CDS
CCGTTGTTCATGCATGAGAA+TGG 0.406746 tig0024677:+60534 None:intergenic
CCATAAGCTTTGCTATCATA+AGG 0.406969 tig0024677:-58443 Msa1419190:CDS
ACATACCAGAAGCAGACTTT+AGG 0.407882 tig0024677:-58649 Msa1419190:CDS
ATCACAATGAAAGTAAATAA+GGG 0.408475 tig0024677:-63742 Msa1419190:CDS
ATTAACTCTGAAAGTGATAA+TGG 0.409576 tig0024677:-59764 Msa1419190:CDS
TCAAAGATTGTTGTTTCCTC+AGG 0.411003 tig0024677:+60422 None:intergenic
AAGTGACAAGATTCAAGAAA+TGG 0.411534 tig0024677:-57687 Msa1419190:CDS
ACTTACAGTTCTCCACTAGA+AGG 0.419485 tig0024677:+60950 None:intergenic
CTTCCCAGTCATGAAAAGAT+TGG 0.424153 tig0024677:+57112 None:intergenic
CATCAGACAATTGTTCTTCA+AGG 0.426301 tig0024677:+57259 None:intergenic
GGAAGATCAATCCAAGTTGC+AGG 0.427190 tig0024677:-62960 Msa1419190:CDS
TAATCATCAAGTGACATTGA+TGG 0.431600 tig0024677:+59827 None:intergenic
CTGTTGATCATGCTTGAGAA+TGG 0.432349 tig0024677:+60630 None:intergenic
CCGATGTAAACATCATCTTT+GGG 0.444317 tig0024677:+63446 None:intergenic
TTTCTTTACCGAAGATAGTT+CGG 0.446641 tig0024677:+57819 None:intergenic
GGAAAAGGAGGCACGCGACT+TGG 0.446853 tig0024677:-63721 Msa1419190:CDS
TCTGCTTCTGGTATGTTGTC+TGG 0.448187 tig0024677:+58656 None:intergenic
AACTCGATAACGATGTCGTT+TGG 0.451029 tig0024677:-56899 Msa1419190:three_prime_UTR
TTCCAATTAGTGTAAGTAAG+AGG 0.461637 tig0024677:+58937 None:intergenic
GAAATCACCTTAAATGAAGA+AGG 0.461651 tig0024677:-59042 Msa1419190:CDS
ACTAATGTAAACATCAGCTT+TGG 0.464189 tig0024677:+60997 None:intergenic
CCCATTATTGTGGTCATTTG+GGG 0.468524 tig0024677:+57523 None:intergenic
CTAGTGGGCCACTCTCGGTT+AGG 0.470673 tig0024677:-61947 Msa1419190:intron
CCTGGAAGAGTGCGCTGCCA+TGG 0.474546 tig0024677:-57794 Msa1419190:CDS
GAAGCATTCCGAACTATCTT+CGG 0.475610 tig0024677:-57827 Msa1419190:CDS
AGCAATTCAGACCAAGATAT+GGG 0.476590 tig0024677:-57569 Msa1419190:CDS
TCATCTTCCAAGTCATCAAA+AGG 0.480538 tig0024677:+57210 None:intergenic
TCATTTCCAAAGTCATCAAA+AGG 0.481346 tig0024677:+57174 None:intergenic
ATGCTATAATAAATGATGCT+TGG 0.483767 tig0024677:-58754 Msa1419190:CDS
CTCATCATTATTTAGGCCAT+GGG 0.484311 tig0024677:+57481 None:intergenic
CCTCATCATTATTTAGGCCA+TGG 0.484321 tig0024677:+57480 None:intergenic
ATGAAAGTAAATAAGGGAAA+AGG 0.485460 tig0024677:-63736 Msa1419190:CDS
TTCTTCTGCTCAATTCCAAA+AGG 0.487887 tig0024677:-61906 Msa1419190:CDS
CCTCAGGTCATGCATGAGAA+TGG 0.488919 tig0024677:+60438 None:intergenic
TTTGAGCAGATCCTGCAACT+TGG 0.490867 tig0024677:+62949 None:intergenic
TTGAGAATGGATCGACTAGC+GGG 0.493143 tig0024677:+60643 None:intergenic
ACATTAGTTCACAACTCAAA+CGG 0.494455 tig0024677:-60982 Msa1419190:CDS
GGCCACTCTCGGTTAGGTGG+TGG 0.496350 tig0024677:-61941 Msa1419190:CDS
GTAGGGGTGTTACCTTCCAT+TGG 0.499221 tig0024677:+59683 None:intergenic
GTGGGCCGGTCTCAGTTCGT+TGG 0.511416 tig0024677:-59923 Msa1419190:CDS
TTTGAGCAGATCCTGCCACT+TGG 0.512670 tig0024677:+60383 None:intergenic
AAAGAAGAAGGAGAATATAT+GGG 0.517336 tig0024677:-58905 Msa1419190:CDS
TTCTCCACTACAAGGTGGCA+TGG 0.521633 tig0024677:+63406 None:intergenic
TTAAATTTATCTTACTTGAA+CGG 0.522475 tig0024677:+58598 None:intergenic
AAACAACAATCTTTGACAGC+TGG 0.523878 tig0024677:-60415 Msa1419190:CDS
ACATCGGTGCACAACTCAAA+CGG 0.524605 tig0024677:-63430 Msa1419190:CDS
TTCTAGTTTAAATCAGGGGA+TGG 0.525203 tig0024677:-63099 Msa1419190:CDS
CGTAATATTACCAGCTGCAG+AGG 0.525968 tig0024677:-63912 Msa1419190:CDS
ATGACTACTATAGACTCTGC+TGG 0.527721 tig0024677:-63032 Msa1419190:CDS
ATTTCTTCTCTTTCAGCAAG+TGG 0.528393 tig0024677:+59060 None:intergenic
ATTACCATCACCTCTGCAGC+TGG 0.531115 tig0024677:+63902 None:intergenic
AAAACTTCAGCTTGAGTAGG+AGG 0.531759 tig0024677:+58043 None:intergenic
CAAAGTTCTAGTTTAAATCA+GGG 0.532231 tig0024677:-63104 Msa1419190:CDS
GAAACACGACAAAGTAAGAA+AGG 0.532579 tig0024677:-58016 Msa1419190:CDS
AAAGAGATGGCAGCAATGGA+GGG 0.533542 tig0024677:-57629 Msa1419190:CDS
CATAAGCTTTGCTATCATAA+GGG 0.534866 tig0024677:-58442 Msa1419190:CDS
TAAAAGAGAAGCTAATATCA+TGG 0.537021 tig0024677:-56945 Msa1419190:three_prime_UTR
TTTGCGCAGATCCTGCCACT+TGG 0.537377 tig0024677:+62799 None:intergenic
GGAAGTTCAATCCAAGTGGC+AGG 0.538723 tig0024677:-62810 Msa1419190:CDS
TCTCCACTACAAGGTGGCAT+GGG 0.539275 tig0024677:+63407 None:intergenic
AGTGATAATGGTGATGTTGA+GGG 0.539299 tig0024677:-59752 Msa1419190:CDS
AGAACAACATACCGACGACT+TGG 0.539872 tig0024677:-57151 Msa1419190:CDS
GGAAGTTCAAGCCAAGTGGC+AGG 0.540366 tig0024677:-60394 Msa1419190:CDS
AGGAAATTAATGATTTATTG+GGG 0.540538 tig0024677:-58629 Msa1419190:CDS
CCAAACTAGTGGGCCACTCT+CGG 0.543416 tig0024677:-61952 Msa1419190:intron
AGGAGGCTCACAATCATCCT+TGG 0.544300 tig0024677:+58060 None:intergenic
TTCTCCACTAGAAGGTTGCA+TGG 0.545017 tig0024677:+60958 None:intergenic
GTTGGTGATGGTGATGGTGA+GGG 0.545120 tig0024677:-61755 Msa1419190:CDS
GAAGGCTATACCAAAGAAGA+AGG 0.545383 tig0024677:-58917 Msa1419190:CDS
ATTACCAGCTGCAGAGGTGA+TGG 0.546186 tig0024677:-63906 Msa1419190:intron
TAAAGAGATGGCAGCAATGG+AGG 0.548073 tig0024677:-57630 Msa1419190:CDS
GTCATCTTCTTCCAAGTCGT+CGG 0.550197 tig0024677:+57140 None:intergenic
TAGTAAAGAGATGGCAGCAA+TGG 0.550552 tig0024677:-57633 Msa1419190:CDS
TCAGATTGACTCATCAATGC+TGG 0.550681 tig0024677:-57075 Msa1419190:exon
TTTATCCTGTAGGTAAATCA+CGG 0.551659 tig0024677:-57282 Msa1419190:intron
TCTTACTTACACTAATTGGA+AGG 0.551758 tig0024677:-58935 Msa1419190:CDS
AAAGGAGGCACGCGACTTGG+AGG 0.552533 tig0024677:-63718 Msa1419190:CDS
TTAATCCAACGAACTGAGAC+CGG 0.557213 tig0024677:+59918 None:intergenic
ATTAACTATGAAAATGATGA+TGG 0.557967 tig0024677:-61728 Msa1419190:CDS
AACCTACCACTTGAAGTTGA+GGG 0.558153 tig0024677:-59791 Msa1419190:CDS
AATGAAGAAGGGGAGCCCAT+TGG 0.560442 tig0024677:-59030 Msa1419190:CDS
CTTCTGGTATGTTGTCTGGA+CGG 0.561123 tig0024677:+58660 None:intergenic
CAAAAGGACCTTGTCGATCG+TGG 0.562659 tig0024677:-61890 Msa1419190:CDS
AAATCACCTTAAATGAAGAA+GGG 0.563337 tig0024677:-59041 Msa1419190:CDS
AAACAACAATCATTGACAGC+TGG 0.563591 tig0024677:-62981 Msa1419190:CDS
CGGCCCATGCAACCTTCTAG+TGG 0.563950 tig0024677:-60962 Msa1419190:CDS
CGGCCCATGCCACCTTGTAG+TGG 0.564484 tig0024677:-63410 Msa1419190:CDS
TAACCTACCACTTGAAGTTG+AGG 0.568282 tig0024677:-59792 Msa1419190:CDS
TGTTGGTGATGGTGATGGTG+AGG 0.568841 tig0024677:-61756 Msa1419190:CDS
AAACGACATCGTTATCGAGT+TGG 0.573943 tig0024677:+56901 None:intergenic
AGTATGACAACTTGCGTGAG+CGG 0.575926 tig0024677:-58691 Msa1419190:CDS
AAGTGATAATGGTGATGTTG+AGG 0.576279 tig0024677:-59753 Msa1419190:CDS
TAAGCAACAACTTGAAGTTG+AGG 0.580484 tig0024677:-61801 Msa1419190:CDS
ACCAATGACAATCCAATGGA+AGG 0.580607 tig0024677:-59695 Msa1419190:intron
ATAAACTATGAAAATGATGA+TGG 0.581271 tig0024677:-59725 Msa1419190:CDS
ATATTCCAGAAAGTATAAAG+TGG 0.583110 tig0024677:-60762 Msa1419190:CDS
CAGTTCTGCTCAATTTCAAG+AGG 0.584026 tig0024677:-59891 Msa1419190:CDS
ACTAATGACACTCCAATGAA+AGG 0.584851 tig0024677:-61698 Msa1419190:intron
AAAGTAAATAAGGGAAAAGG+AGG 0.587085 tig0024677:-63733 Msa1419190:CDS
ATCAACCATGAAAATGATGT+TGG 0.588199 tig0024677:-61773 Msa1419190:CDS
GAAAACCAATGACAATCCAA+TGG 0.589221 tig0024677:-59699 Msa1419190:CDS
CATGTTAATGTGAACAATGA+TGG 0.596679 tig0024677:-63652 Msa1419190:intron
AATTCAGAAAACAACGATGA+GGG 0.597970 tig0024677:-60482 Msa1419190:CDS
ATATCACCCTCAACTTCAAG+TGG 0.599635 tig0024677:+59785 None:intergenic
ATCCACCACCTAACCGAGAG+TGG 0.601174 tig0024677:+61939 None:intergenic
AATCACCTTAAATGAAGAAG+GGG 0.602115 tig0024677:-59040 Msa1419190:CDS
CATGAAAATGATGTTGGTGA+TGG 0.604334 tig0024677:-61767 Msa1419190:CDS
AAAGTTCTAGTTTAAATCAG+GGG 0.604848 tig0024677:-63103 Msa1419190:CDS
TAATAAATGATGCTTGGAGA+CGG 0.606235 tig0024677:-58748 Msa1419190:CDS
AATGATGTTGGTGATGGTGA+TGG 0.607681 tig0024677:-61761 Msa1419190:CDS
AAGGTGTTGTAACTCTTCCA+TGG 0.608703 tig0024677:+57777 None:intergenic
ATGAATGTAGCCCATTATTG+TGG 0.611135 tig0024677:+57513 None:intergenic
GTGGGCCACTCTCGGTTAGG+TGG 0.613865 tig0024677:-61944 Msa1419190:CDS
TGACTACTATAGACTCTGCT+GGG 0.622977 tig0024677:-63031 Msa1419190:CDS
TGACAAGATTCAAGAAATGG+AGG 0.626506 tig0024677:-57684 Msa1419190:CDS
CCCAAAGATGATGTTTACAT+CGG 0.630117 tig0024677:-63446 Msa1419190:CDS
GCAATTCAGACCAAGATATG+GGG 0.632072 tig0024677:-57568 Msa1419190:CDS
CATTCATCTACATCTGCCCA+TGG 0.633478 tig0024677:-57497 Msa1419190:CDS
CTTGAGAATGGATCGACTAG+CGG 0.634905 tig0024677:+60642 None:intergenic
ACTTACGGTTCTCCACTACA+AGG 0.637620 tig0024677:+63398 None:intergenic
TATGCTCGAGAATTCATGAT+CGG 0.640321 tig0024677:-59083 Msa1419190:CDS
CCATGGCCTAAATAATGATG+AGG 0.641883 tig0024677:-57480 Msa1419190:intron
CACCCTCAACTTCAAGTGGT+AGG 0.642167 tig0024677:+59789 None:intergenic
AGCTGGAAGTTCAAGCCAAG+TGG 0.642871 tig0024677:-60398 Msa1419190:CDS
TCTCCACTAGAAGGTTGCAT+GGG 0.644391 tig0024677:+60959 None:intergenic
ACCTGGAAGTTCAATCCAAG+TGG 0.651682 tig0024677:-62814 Msa1419190:CDS
AAATGATCAAGTGACACTGA+GGG 0.652066 tig0024677:+61833 None:intergenic
ATACAACAATCATTGACACC+TGG 0.652106 tig0024677:-62831 Msa1419190:CDS
GGAGGTAAAACATGAAACGA+TGG 0.653175 tig0024677:-57666 Msa1419190:CDS
TGGAAGGTCCATGATCAACA+AGG 0.654556 tig0024677:+59867 None:intergenic
GCCAGATTGTTGAATCACAA+AGG 0.661508 tig0024677:-56823 Msa1419190:three_prime_UTR
CAATTCAGACCAAGATATGG+GGG 0.664719 tig0024677:-57567 Msa1419190:CDS
CCATTCTCATGCATGACCTG+AGG 0.667212 tig0024677:-60438 Msa1419190:CDS
AAATTCAGAAAACAACGATG+AGG 0.669446 tig0024677:-60483 Msa1419190:CDS
AAAATGATCAAGTGACACTG+AGG 0.669992 tig0024677:+61832 None:intergenic
CTATGTGTAGCGTGCAACCA+AGG 0.673476 tig0024677:-58077 Msa1419190:intron
AAGAGATGGCAGCAATGGAG+GGG 0.675148 tig0024677:-57628 Msa1419190:CDS
CCATTCTCATGCATGAACAA+CGG 0.678870 tig0024677:-60534 Msa1419190:CDS
TGAGAATGGATCGACTAGCG+GGG 0.689452 tig0024677:+60644 None:intergenic
AGCAGAATATTGCAACACAA+CGG 0.691187 tig0024677:+63936 None:intergenic
CCATTCTAAAGAATGACCAA+AGG 0.692103 tig0024677:-62854 Msa1419190:CDS
TTGATCATGGACCTTCCAAG+AGG 0.695593 tig0024677:-59862 Msa1419190:CDS
TGAATGATCCACGATCGACA+AGG 0.696041 tig0024677:+61882 None:intergenic
TTTGGTTCTTGATAGAGACG+AGG 0.701174 tig0024677:-61024 Msa1419190:intron
TACGGTTCTCCACTACAAGG+TGG 0.728989 tig0024677:+63401 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATGTTTTTTTTTTTTTTTG+AGG - tig0024677:57367-57386 Msa1419190:intron 10.0%
!!! ATGTTTTTTTTTTTTTTTGA+GGG - tig0024677:57368-57387 Msa1419190:intron 10.0%
!!! CTTTATTTTTTGTTTTTTTT+TGG - tig0024677:59606-59625 Msa1419190:intron 10.0%
!! AAATACATATATTAAATCAC+CGG + tig0024677:57083-57102 None:intergenic 15.0%
!!! TTATACTTTTCAATTGATAA+AGG - tig0024677:57434-57453 Msa1419190:intron 15.0%
!! TAAATAAATAGAATGAACAA+AGG + tig0024677:61124-61143 None:intergenic 15.0%
!! TTAGGAAATTAATGATTTAT+TGG - tig0024677:62017-62036 Msa1419190:intron 15.0%
!! TAGGAAATTAATGATTTATT+GGG - tig0024677:62018-62037 Msa1419190:intron 15.0%
!! TTAAATTTATCTTACTTGAA+CGG + tig0024677:62053-62072 None:intergenic 15.0%
!! GTTAAATTCTATTAAAAGTT+TGG - tig0024677:62267-62286 Msa1419190:intron 15.0%
!! TATCACAATGAAAGTAAATA+AGG - tig0024677:56905-56924 Msa1419190:three_prime_UTR 20.0%
!! ATCACAATGAAAGTAAATAA+GGG - tig0024677:56906-56925 Msa1419190:three_prime_UTR 20.0%
!! AAAACTGAATTATCAAAAGA+AGG - tig0024677:57308-57327 Msa1419190:intron 20.0%
!! AAAACATAATGTGTTCTAAT+AGG + tig0024677:57355-57374 None:intergenic 20.0%
!! GAAAGGAGTAATAAAAATAA+TGG + tig0024677:57937-57956 None:intergenic 20.0%
!! TATTACAATTTACCATACAA+TGG - tig0024677:58340-58359 Msa1419190:intron 20.0%
!! ATTAACTATGAAAATGATGA+TGG - tig0024677:58920-58939 Msa1419190:CDS 20.0%
!! GAAACAAAATGAATATACAA+AGG + tig0024677:59123-59142 None:intergenic 20.0%
!! TAATTCATATATGAAATCAG+AGG - tig0024677:59288-59307 Msa1419190:intron 20.0%
!! AGAAAGTTAATCAATAACTA+TGG + tig0024677:59454-59473 None:intergenic 20.0%
!!! AGACAAAACTTCTTTTAAAA+GGG - tig0024677:59524-59543 Msa1419190:intron 20.0%
!!! TTATACTTTTCAATTGAGAA+AGG - tig0024677:59856-59875 Msa1419190:CDS 20.0%
!!! TTTCACTTGTTTTATGTTTT+AGG - tig0024677:60613-60632 Msa1419190:CDS 20.0%
!!! TTCACTTGTTTTATGTTTTA+GGG - tig0024677:60614-60633 Msa1419190:CDS 20.0%
!! ATAAACTATGAAAATGATGA+TGG - tig0024677:60923-60942 Msa1419190:intron 20.0%
!!! ATTCTTTCTGTTTAAGTTAT+TGG - tig0024677:61172-61191 Msa1419190:intron 20.0%
!!! CATATATAACTTGTTGATAT+TGG - tig0024677:61488-61507 Msa1419190:intron 20.0%
!! AGGAAATTAATGATTTATTG+GGG - tig0024677:62019-62038 Msa1419190:intron 20.0%
!!! TTTTTACTACTATTAGTGAA+TGG - tig0024677:62245-62264 Msa1419190:intron 20.0%
!! ATTTAATTATTCGTCATTCA+GGG + tig0024677:62504-62523 None:intergenic 20.0%
!! AATTTAATTATTCGTCATTC+AGG + tig0024677:62505-62524 None:intergenic 20.0%
!! TTGAAAAGAAGTAAAGAAAT+TGG - tig0024677:62899-62918 Msa1419190:CDS 20.0%
! AAGTAACGAGTAAAAGAAAA+AGG + tig0024677:56780-56799 None:intergenic 25.0%
! ATGAAAGTAAATAAGGGAAA+AGG - tig0024677:56912-56931 Msa1419190:three_prime_UTR 25.0%
!!! GAAATGAAAGTTTGTTTTTC+CGG - tig0024677:57061-57080 Msa1419190:three_prime_UTR 25.0%
! GAGATAAATGTATATACTAG+AGG + tig0024677:57138-57157 None:intergenic 25.0%
!!! TTTTGATAATTCAGTTTTGC+AGG + tig0024677:57306-57325 None:intergenic 25.0%
!!! CAAAGTTCTAGTTTAAATCA+GGG - tig0024677:57544-57563 Msa1419190:CDS 25.0%
!!! AAAGTTCTAGTTTAAATCAG+GGG - tig0024677:57545-57564 Msa1419190:CDS 25.0%
! AACATAAAAAACAAGATCAC+AGG - tig0024677:57875-57894 Msa1419190:CDS 25.0%
! AGATTGAGATACTATAAGTT+AGG - tig0024677:58034-58053 Msa1419190:CDS 25.0%
! ACATAAAGTCAATAATAGAG+TGG + tig0024677:58104-58123 None:intergenic 25.0%
! TGAAATAGCAGTAATAACAA+TGG + tig0024677:58185-58204 None:intergenic 25.0%
! GTATGGTAAATTGTAATAGT+TGG + tig0024677:58338-58357 None:intergenic 25.0%
!!! TGTCACTTGATCATTTTAAA+AGG - tig0024677:58822-58841 Msa1419190:intron 25.0%
! TGAAACATAGTTAACTAGTA+GGG + tig0024677:58982-59001 None:intergenic 25.0%
! ATGAAACATAGTTAACTAGT+AGG + tig0024677:58983-59002 None:intergenic 25.0%
! TATCATATGTATATCATCAG+TGG + tig0024677:59034-59053 None:intergenic 25.0%
!!! TTTTTGTTGTACATTCAGTT+AGG - tig0024677:59239-59258 Msa1419190:intron 25.0%
!! GAGACAAAACTTCTTTTAAA+AGG - tig0024677:59523-59542 Msa1419190:intron 25.0%
!!! GACAAAACTTCTTTTAAAAG+GGG - tig0024677:59525-59544 Msa1419190:intron 25.0%
!!! ACAAAACTTCTTTTAAAAGG+GGG - tig0024677:59526-59545 Msa1419190:intron 25.0%
! AATGTATATAGTAGATGACA+AGG + tig0024677:59567-59586 None:intergenic 25.0%
! AAAATAAAGAATTTGAGCTG+TGG + tig0024677:59595-59614 None:intergenic 25.0%
!!! GTTCAATTTCTTGTTGTTTA+AGG - tig0024677:59719-59738 Msa1419190:CDS 25.0%
!! TGAGTTGAATTATCAAAAGA+AGG - tig0024677:59766-59785 Msa1419190:CDS 25.0%
!! ATATTCCAGAAAGTATAAAG+TGG - tig0024677:59886-59905 Msa1419190:CDS 25.0%
!!! ATAAAGTGGATGTTTTTGAA+AGG - tig0024677:59900-59919 Msa1419190:CDS 25.0%
! AACCAAAAAATCAGAAAACA+AGG - tig0024677:59967-59986 Msa1419190:intron 25.0%
!!! ATCCTTGTTTTCTGATTTTT+TGG + tig0024677:59972-59991 None:intergenic 25.0%
!! AATTTTTGCTTGGTTTAAAG+TGG + tig0024677:60150-60169 None:intergenic 25.0%
!! TTGTTTTCTGAATTTTTGCT+TGG + tig0024677:60160-60179 None:intergenic 25.0%
! AATAAAGGACAAGTAATGAT+TGG + tig0024677:60339-60358 None:intergenic 25.0%
! GAAAGGAGCAAATATAATAA+AGG + tig0024677:60354-60373 None:intergenic 25.0%
! TGTTGAAAAATCAAACTAGT+GGG - tig0024677:60707-60726 Msa1419190:CDS 25.0%
!! ATTAACTCTGAAAGTGATAA+TGG - tig0024677:60884-60903 Msa1419190:intron 25.0%
!! TTTCTGTTTAAGTTATTGGT+TGG - tig0024677:61176-61195 Msa1419190:intron 25.0%
! TTTCATTTGTACTTTCAGTT+AGG - tig0024677:61220-61239 Msa1419190:intron 25.0%
! TTCATTTGTACTTTCAGTTA+GGG - tig0024677:61221-61240 Msa1419190:intron 25.0%
! GATAGCATAAGAGATATTTA+AGG + tig0024677:61395-61414 None:intergenic 25.0%
! TTGATATTGGAATGTATACT+AGG - tig0024677:61501-61520 Msa1419190:intron 25.0%
! TAGGAGAAACATCAAAAAAA+AGG - tig0024677:61520-61539 Msa1419190:intron 25.0%
! ACATCAAAAAAAAGGAAAAG+AGG - tig0024677:61528-61547 Msa1419190:intron 25.0%
! AAATCACCTTAAATGAAGAA+GGG - tig0024677:61607-61626 Msa1419190:intron 25.0%
!!! TTCTGAATTCAGCAATTTTT+TGG - tig0024677:61659-61678 Msa1419190:intron 25.0%
!!! TCTGAATTCAGCAATTTTTT+GGG - tig0024677:61660-61679 Msa1419190:intron 25.0%
! AAAGAAGAAGGAGAATATAT+GGG - tig0024677:61743-61762 Msa1419190:CDS 25.0%
! ATGCTATAATAAATGATGCT+TGG - tig0024677:61894-61913 Msa1419190:CDS 25.0%
! AAATATGAACACTTGTAGAA+TGG - tig0024677:62371-62390 Msa1419190:intron 25.0%
! AAAACTTACAATTGTGTTAC+TGG + tig0024677:62678-62697 None:intergenic 25.0%
!! TAAAAAAAAGCATGCTATTG+AGG - tig0024677:62928-62947 Msa1419190:CDS 25.0%
! GAAAAAACATAGTAAAGAGA+TGG - tig0024677:63006-63025 Msa1419190:CDS 25.0%
! AACATACCTCATCATTATTT+AGG + tig0024677:63177-63196 None:intergenic 25.0%
! TTCATTACCATAAGGAATAT+TGG - tig0024677:63228-63247 Msa1419190:intron 25.0%
! TTATTAGTAGCTAAAATACG+AGG - tig0024677:63297-63316 Msa1419190:intron 25.0%
!!! TCTTAGTATTTTTATCCTGT+AGG - tig0024677:63356-63375 Msa1419190:intron 25.0%
! GATTCTATTATCAACCTATA+AGG + tig0024677:63637-63656 None:intergenic 25.0%
! TAAAAGAGAAGCTAATATCA+TGG - tig0024677:63703-63722 Msa1419190:CDS 25.0%
!!! TAATATCATGGTGTGTTTTT+TGG - tig0024677:63715-63734 Msa1419190:CDS 25.0%
AAAGTAAATAAGGGAAAAGG+AGG - tig0024677:56915-56934 Msa1419190:three_prime_UTR 30.0%
CATGTTAATGTGAACAATGA+TGG - tig0024677:56996-57015 Msa1419190:three_prime_UTR 30.0%
GAACCAAGAAATGAAACTTA+CGG + tig0024677:57268-57287 None:intergenic 30.0%
TAAGTTTCATTTCTTGGTTC+AGG - tig0024677:57268-57287 Msa1419190:CDS 30.0%
ATGTGTTCTAATAGGTGAAA+AGG + tig0024677:57347-57366 None:intergenic 30.0%
!!! ATTTTGATTCAATTCAGCAG+AGG + tig0024677:57488-57507 None:intergenic 30.0%
!! GCAAAGTTCTAGTTTAAATC+AGG - tig0024677:57543-57562 Msa1419190:CDS 30.0%
TCAATGATTGTTGTATCCTT+TGG + tig0024677:57813-57832 None:intergenic 30.0%
ATGGACAAGTATGATTGAAA+AGG + tig0024677:57918-57937 None:intergenic 30.0%
ATGAAGATTACAGTGATGAA+AGG + tig0024677:57954-57973 None:intergenic 30.0%
AAAGTCAATAATAGAGTGGT+GGG + tig0024677:58100-58119 None:intergenic 30.0%
TAAAGTCAATAATAGAGTGG+TGG + tig0024677:58101-58120 None:intergenic 30.0%
TTATAGATTGCCAAACATAG+TGG + tig0024677:58135-58154 None:intergenic 30.0%
!! CTGCTATTTCAACTGTAAAA+TGG - tig0024677:58194-58213 Msa1419190:intron 30.0%
! CTCCAGGATTAGTATAAATA+GGG - tig0024677:58218-58237 Msa1419190:intron 30.0%
! AATTGTAATAGTTGGCTCAA+AGG + tig0024677:58330-58349 None:intergenic 30.0%
! TTTCCCCATACTTTATGTTT+TGG - tig0024677:58604-58623 Msa1419190:intron 30.0%
! TTCCCCATACTTTATGTTTT+GGG - tig0024677:58605-58624 Msa1419190:intron 30.0%
TACCCCAAAACATAAAGTAT+GGG + tig0024677:58611-58630 None:intergenic 30.0%
ATACCCCAAAACATAAAGTA+TGG + tig0024677:58612-58631 None:intergenic 30.0%
TGTTGAAAAACCAAACTAGT+GGG - tig0024677:58686-58705 Msa1419190:CDS 30.0%
ATCAACCATGAAAATGATGT+TGG - tig0024677:58875-58894 Msa1419190:intron 30.0%
GAAACATAGTTAACTAGTAG+GGG + tig0024677:58981-59000 None:intergenic 30.0%
ATAGCACTATAGTAACAGAA+GGG + tig0024677:59068-59087 None:intergenic 30.0%
ACTCTTTCTGTTTCAGTTAT+TGG - tig0024677:59191-59210 Msa1419190:intron 30.0%
! ATATGTGTAGTAACTTGCAT+AGG - tig0024677:59488-59507 Msa1419190:intron 30.0%
! TATGTGTAGTAACTTGCATA+GGG - tig0024677:59489-59508 Msa1419190:intron 30.0%
ACTAATGTAAACATCAGCTT+TGG + tig0024677:59654-59673 None:intergenic 30.0%
ACATTAGTTCACAACTCAAA+CGG - tig0024677:59666-59685 Msa1419190:intron 30.0%
AACATCCACTTTATACTTTC+TGG + tig0024677:59894-59913 None:intergenic 30.0%
!!! AAAGGATCTTTTTCAAAGCA+AGG - tig0024677:59918-59937 Msa1419190:CDS 30.0%
!!! AAGGATCTTTTTCAAAGCAA+GGG - tig0024677:59919-59938 Msa1419190:CDS 30.0%
!!! ATTTTTTGGTTGCTTTGAAG+TGG + tig0024677:59958-59977 None:intergenic 30.0%
AAATTCAGAAAACAACGATG+AGG - tig0024677:60165-60184 Msa1419190:intron 30.0%
AATTCAGAAAACAACGATGA+GGG - tig0024677:60166-60185 Msa1419190:intron 30.0%
AACATAAAAAGCAAGATCAC+AGG - tig0024677:60291-60310 Msa1419190:intron 30.0%
TGTTAGTTAGTGCAACAAAA+TGG + tig0024677:60509-60528 None:intergenic 30.0%
GTGTTGAAAAATCAAACTAG+TGG - tig0024677:60706-60725 Msa1419190:CDS 30.0%
TAATCATCAAGTGACATTGA+TGG + tig0024677:60824-60843 None:intergenic 30.0%
TGAAACATAGTTGAGTAGTA+GGG + tig0024677:60985-61004 None:intergenic 30.0%
ATGAAACATAGTTGAGTAGT+AGG + tig0024677:60986-61005 None:intergenic 30.0%
CATATCATATGTGTCATATG+TGG + tig0024677:61037-61056 None:intergenic 30.0%
CAGAAAGAATGAACAACAAA+GGG + tig0024677:61162-61181 None:intergenic 30.0%
ACAGAAAGAATGAACAACAA+AGG + tig0024677:61163-61182 None:intergenic 30.0%
ACCAACTGAATGATACAAAT+GGG + tig0024677:61284-61303 None:intergenic 30.0%
AACCAACTGAATGATACAAA+TGG + tig0024677:61285-61304 None:intergenic 30.0%
! TTTTTCTGCTATCAATCAGT+TGG - tig0024677:61364-61383 Msa1419190:intron 30.0%
AAAAAAAGGAAAAGAGGAAG+AGG - tig0024677:61534-61553 Msa1419190:intron 30.0%
GAAATCACCTTAAATGAAGA+AGG - tig0024677:61606-61625 Msa1419190:intron 30.0%
AATCACCTTAAATGAAGAAG+GGG - tig0024677:61608-61627 Msa1419190:intron 30.0%
!! TCAGAAACTATCTTTTGAGT+TGG + tig0024677:61645-61664 None:intergenic 30.0%
TTCCAATTAGTGTAAGTAAG+AGG + tig0024677:61714-61733 None:intergenic 30.0%
TCTTACTTACACTAATTGGA+AGG - tig0024677:61713-61732 Msa1419190:CDS 30.0%
CATATATTCTCCTTCTTCTT+TGG + tig0024677:61744-61763 None:intergenic 30.0%
CAAAGAAGAAGGAGAATATA+TGG - tig0024677:61742-61761 Msa1419190:CDS 30.0%
AGATACATTGTTCCTGAAAA+AGG - tig0024677:61857-61876 Msa1419190:CDS 30.0%
TAATAAATGATGCTTGGAGA+CGG - tig0024677:61900-61919 Msa1419190:CDS 30.0%
! CATTGATGATTTCAGGAAAT+TGG - tig0024677:62129-62148 Msa1419190:intron 30.0%
CTTATGATAGCAAAGCTTAT+GGG + tig0024677:62207-62226 None:intergenic 30.0%
! CATAAGCTTTGCTATCATAA+GGG - tig0024677:62206-62225 Msa1419190:intron 30.0%
TTTCATAAAGTCCATTCAGT+GGG + tig0024677:62353-62372 None:intergenic 30.0%
! TTTTCATAAAGTCCATTCAG+TGG + tig0024677:62354-62373 None:intergenic 30.0%
!! TTCTGATTTTGGTGAAGAAA+TGG - tig0024677:62423-62442 Msa1419190:intron 30.0%
!! ATTTTGGTGAAGAAATGGAT+GGG - tig0024677:62428-62447 Msa1419190:intron 30.0%
GATTTAAGTGCCAATAATAC+TGG + tig0024677:62460-62479 None:intergenic 30.0%
GTGATGATTTCTACTACTAT+TGG - tig0024677:62534-62553 Msa1419190:intron 30.0%
ATAAAAACTTCAGCTTGAGT+AGG + tig0024677:62611-62630 None:intergenic 30.0%
CAAGATTTGATCGTAAATTC+TGG - tig0024677:62785-62804 Msa1419190:CDS 30.0%
TTTCTTTACCGAAGATAGTT+CGG + tig0024677:62832-62851 None:intergenic 30.0%
!! TTACTTCTTTTCAAGAGAGA+AGG + tig0024677:62893-62912 None:intergenic 30.0%
AAGTGACAAGATTCAAGAAA+TGG - tig0024677:62961-62980 Msa1419190:CDS 30.0%
CCATTATTGTTGCAACTATA+AGG + tig0024677:63202-63221 None:intergenic 30.0%
CCTTATAGTTGCAACAATAA+TGG - tig0024677:63199-63218 Msa1419190:intron 30.0%
! TTCCTTATGGTAATGAATGT+AGG + tig0024677:63225-63244 None:intergenic 30.0%
!!! AATGTTTTAGCTCTCAATGA+GGG + tig0024677:63257-63276 None:intergenic 30.0%
!!! TAATGTTTTAGCTCTCAATG+AGG + tig0024677:63258-63277 None:intergenic 30.0%
TTTATCCTGTAGGTAAATCA+CGG - tig0024677:63366-63385 Msa1419190:intron 30.0%
TCATTTCCAAAGTCATCAAA+AGG + tig0024677:63477-63496 None:intergenic 30.0%
GATAAGAACACAAACCTTAT+AGG - tig0024677:63620-63639 Msa1419190:intron 30.0%
! TACATCGAGCTTCTTTTTAT+AGG - tig0024677:63663-63682 Msa1419190:CDS 30.0%
! TTGAATCACAAAGGTGATTT+TGG - tig0024677:63834-63853 Msa1419190:intron 30.0%
AGCAGAATATTGCAACACAA+CGG + tig0024677:56715-56734 None:intergenic 35.0%
ACACACATACATTACACTCT+GGG + tig0024677:56851-56870 None:intergenic 35.0%
TACACACATACATTACACTC+TGG + tig0024677:56852-56871 None:intergenic 35.0%
!! TTGCATTTGTGTTGATTTGC+AGG - tig0024677:56872-56891 Msa1419190:three_prime_UTR 35.0%
CCGATGTAAACATCATCTTT+GGG + tig0024677:57205-57224 None:intergenic 35.0%
CCCAAAGATGATGTTTACAT+CGG - tig0024677:57202-57221 Msa1419190:CDS 35.0%
ACCGATGTAAACATCATCTT+TGG + tig0024677:57206-57225 None:intergenic 35.0%
GAACCGTAAGTTTCATTTCT+TGG - tig0024677:57262-57281 Msa1419190:CDS 35.0%
!! TTCTAGTTTAAATCAGGGGA+TGG - tig0024677:57549-57568 Msa1419190:CDS 35.0%
AAACAACAATCATTGACAGC+TGG - tig0024677:57667-57686 Msa1419190:CDS 35.0%
! CCTTTGGTCATTCTTTAGAA+TGG + tig0024677:57797-57816 None:intergenic 35.0%
! CCATTCTAAAGAATGACCAA+AGG - tig0024677:57794-57813 Msa1419190:CDS 35.0%
ATACAACAATCATTGACACC+TGG - tig0024677:57817-57836 Msa1419190:CDS 35.0%
! AAAAGGCATGTTTGAAAACC+TGG + tig0024677:57901-57920 None:intergenic 35.0%
CACTGTAATCTTCATTTGTG+AGG - tig0024677:57959-57978 Msa1419190:intron 35.0%
AGCAACCAAAAACATCACAA+AGG + tig0024677:57985-58004 None:intergenic 35.0%
!!! TGTTTTTGGTTGCTACATTC+TGG - tig0024677:57991-58010 Msa1419190:CDS 35.0%
CCTATTTATACTAATCCTGG+AGG + tig0024677:58220-58239 None:intergenic 35.0%
! CCTCCAGGATTAGTATAAAT+AGG - tig0024677:58217-58236 Msa1419190:intron 35.0%
GTCCCTATTTATACTAATCC+TGG + tig0024677:58223-58242 None:intergenic 35.0%
!! TTGAACTTGTTAGTTAGTGC+AGG + tig0024677:58431-58450 None:intergenic 35.0%
ATGGAGGAAGTTTGTGTAAT+AGG - tig0024677:58526-58545 Msa1419190:intron 35.0%
AGCATGAACAGTAAGTCAAT+AGG + tig0024677:58582-58601 None:intergenic 35.0%
! TCCCCATACTTTATGTTTTG+GGG - tig0024677:58606-58625 Msa1419190:intron 35.0%
ACCCCAAAACATAAAGTATG+GGG + tig0024677:58610-58629 None:intergenic 35.0%
GTAAGTCAGTAGCATAACAT+GGG + tig0024677:58640-58659 None:intergenic 35.0%
AGTAAGTCAGTAGCATAACA+TGG + tig0024677:58641-58660 None:intergenic 35.0%
GTGTTGAAAAACCAAACTAG+TGG - tig0024677:58685-58704 Msa1419190:CDS 35.0%
TTCTTCTGCTCAATTCCAAA+AGG - tig0024677:58742-58761 Msa1419190:CDS 35.0%
AAATGATCAAGTGACACTGA+GGG + tig0024677:58818-58837 None:intergenic 35.0%
AAAATGATCAAGTGACACTG+AGG + tig0024677:58819-58838 None:intergenic 35.0%
TAAGCAACAACTTGAAGTTG+AGG - tig0024677:58847-58866 Msa1419190:intron 35.0%
! CATCACCAACATCATTTTCA+TGG + tig0024677:58883-58902 None:intergenic 35.0%
! CATGAAAATGATGTTGGTGA+TGG - tig0024677:58881-58900 Msa1419190:intron 35.0%
ACTAATGACACTCCAATGAA+AGG - tig0024677:58950-58969 Msa1419190:CDS 35.0%
CATAGCACTATAGTAACAGA+AGG + tig0024677:59069-59088 None:intergenic 35.0%
CTTCTGTTACTATAGTGCTA+TGG - tig0024677:59067-59086 Msa1419190:CDS 35.0%
!!! CTTCCTTGTTTCTACTGTTT+TGG - tig0024677:59094-59113 Msa1419190:CDS 35.0%
ACCTACTGAATGATGCAAAA+GGG + tig0024677:59268-59287 None:intergenic 35.0%
AACCTACTGAATGATGCAAA+AGG + tig0024677:59269-59288 None:intergenic 35.0%
TTCAGAATCATCTGTATACG+TGG - tig0024677:59316-59335 Msa1419190:intron 35.0%
CAGCAGTATATAGCAGAAAA+AGG + tig0024677:59346-59365 None:intergenic 35.0%
ACTGCTGTGTATCATTCAAT+TGG - tig0024677:59359-59378 Msa1419190:intron 35.0%
!!! TACACGGTCATTTTTTGCTT+CGG + tig0024677:59409-59428 None:intergenic 35.0%
! ATGTGTAGTAACTTGCATAG+GGG - tig0024677:59490-59509 Msa1419190:intron 35.0%
TGATAATTCAACTCAGCCAA+TGG + tig0024677:59761-59780 None:intergenic 35.0%
!!! ATCTTTTTCAAAGCAAGGGA+TGG - tig0024677:59923-59942 Msa1419190:CDS 35.0%
!!! ATTTTTTGCTTGCTGTGAAG+TGG + tig0024677:60054-60073 None:intergenic 35.0%
!! TCAAAGATTGTTGTTTCCTC+AGG + tig0024677:60229-60248 None:intergenic 35.0%
AAACAACAATCTTTGACAGC+TGG - tig0024677:60233-60252 Msa1419190:intron 35.0%
TAATGATTGGCAAAGCATGT+TGG + tig0024677:60326-60345 None:intergenic 35.0%
ATGAAGATTGCAGTGATGAA+AGG + tig0024677:60371-60390 None:intergenic 35.0%
AAAAAAGTAGCAGCCAACAA+TGG + tig0024677:60402-60421 None:intergenic 35.0%
GTTGAGTACTATTACTACCA+TGG - tig0024677:60425-60444 Msa1419190:CDS 35.0%
GTTAGTGCAACAAAATGGTT+AGG + tig0024677:60504-60523 None:intergenic 35.0%
!! AAGTGATAATGGTGATGTTG+AGG - tig0024677:60895-60914 Msa1419190:intron 35.0%
!! AGTGATAATGGTGATGTTGA+GGG - tig0024677:60896-60915 Msa1419190:intron 35.0%
GAAAACCAATGACAATCCAA+TGG - tig0024677:60949-60968 Msa1419190:intron 35.0%
GAAACATAGTTGAGTAGTAG+GGG + tig0024677:60984-61003 None:intergenic 35.0%
ATCATATGTGTCATATGTGG+TGG + tig0024677:61034-61053 None:intergenic 35.0%
!!! CTCCTTGTTTTTGAATGCTT+TGG - tig0024677:61095-61114 Msa1419190:intron 35.0%
! CACCAAAGCATTCAAAAACA+AGG + tig0024677:61100-61119 None:intergenic 35.0%
!!! CTTGTTTTTGAATGCTTTGG+TGG - tig0024677:61098-61117 Msa1419190:intron 35.0%
GGTTCCTCTTATCTATATTG+AGG - tig0024677:61255-61274 Msa1419190:intron 35.0%
GCTACCTCAATATAGATAAG+AGG + tig0024677:61262-61281 None:intergenic 35.0%
TATTCAGAATCATCTGCGTA+CGG - tig0024677:61330-61349 Msa1419190:intron 35.0%
TATGCTCGAGAATTCATGAT+CGG - tig0024677:61565-61584 Msa1419190:intron 35.0%
ATTTCTTCTCTTTCAGCAAG+TGG + tig0024677:61591-61610 None:intergenic 35.0%
!!! ATCTTTTGAGTTGGACCAAT+GGG + tig0024677:61636-61655 None:intergenic 35.0%
!!! TATCTTTTGAGTTGGACCAA+TGG + tig0024677:61637-61656 None:intergenic 35.0%
!!! ATTTTTTGGGATCAGTAGCA+AGG - tig0024677:61673-61692 Msa1419190:intron 35.0%
GTCCTCTTACTTACACTAAT+TGG - tig0024677:61709-61728 Msa1419190:CDS 35.0%
AATTTCCTAAAGTCTGCTTC+TGG + tig0024677:62007-62026 None:intergenic 35.0%
! TGACTCTCATTGATGATTTC+AGG - tig0024677:62122-62141 Msa1419190:intron 35.0%
ACAAAAATGTAGACATCGAG+CGG - tig0024677:62179-62198 Msa1419190:intron 35.0%
CCTTATGATAGCAAAGCTTA+TGG + tig0024677:62208-62227 None:intergenic 35.0%
! CCATAAGCTTTGCTATCATA+AGG - tig0024677:62205-62224 Msa1419190:intron 35.0%
TGCTATCATAAGGGAAAAAC+TGG - tig0024677:62215-62234 Msa1419190:intron 35.0%
!! GATTTTGGTGAAGAAATGGA+TGG - tig0024677:62427-62446 Msa1419190:intron 35.0%
GAAACACGACAAAGTAAGAA+AGG - tig0024677:62632-62651 Msa1419190:intron 35.0%
! CAATTGTGTTACTGGTAACT+TGG + tig0024677:62670-62689 None:intergenic 35.0%
ATCTTCGGTAAAGAAAAACC+TGG - tig0024677:62836-62855 Msa1419190:CDS 35.0%
TGACAAGATTCAAGAAATGG+AGG - tig0024677:62964-62983 Msa1419190:CDS 35.0%
GGAAATTGCAAGTTCTTCTA+AGG - tig0024677:63041-63060 Msa1419190:CDS 35.0%
TATCTTGGTCTGAATTGCTT+TGG + tig0024677:63078-63097 None:intergenic 35.0%
AAGCAATTCAGACCAAGATA+TGG - tig0024677:63078-63097 Msa1419190:CDS 35.0%
AGCAATTCAGACCAAGATAT+GGG - tig0024677:63079-63098 Msa1419190:CDS 35.0%
ATGAATGTAGCCCATTATTG+TGG + tig0024677:63138-63157 None:intergenic 35.0%
CTCATCATTATTTAGGCCAT+GGG + tig0024677:63170-63189 None:intergenic 35.0%
CATCAGACAATTGTTCTTCA+AGG + tig0024677:63392-63411 None:intergenic 35.0%
!! AGAACAACCTTTTGATGACT+TGG - tig0024677:63431-63450 Msa1419190:CDS 35.0%
TCATCTTCCAAGTCATCAAA+AGG + tig0024677:63441-63460 None:intergenic 35.0%
! AAGACCAATCTTTTCATGAC+TGG - tig0024677:63532-63551 Msa1419190:intron 35.0%
! AGACCAATCTTTTCATGACT+GGG - tig0024677:63533-63552 Msa1419190:intron 35.0%
ACCTTTGTGATTCAACAATC+TGG + tig0024677:63829-63848 None:intergenic 35.0%
!!! ACAAAGGTGATTTTGGAGTT+TGG - tig0024677:63841-63860 Msa1419190:intron 35.0%
!! TTACACTCTGGGATTTCTCT+TGG + tig0024677:56840-56859 None:intergenic 40.0%
AAGAAAGAGAGAAACAGTGG+TGG + tig0024677:57113-57132 None:intergenic 40.0%
! ACCACTGTTTCTCTCTTTCT+TGG - tig0024677:57112-57131 Msa1419190:CDS 40.0%
ATGACTACTATAGACTCTGC+TGG - tig0024677:57616-57635 Msa1419190:CDS 40.0%
TGACTACTATAGACTCTGCT+GGG - tig0024677:57617-57636 Msa1419190:CDS 40.0%
CGTTTGATCATGCTTGAGAA+TGG + tig0024677:57647-57666 None:intergenic 40.0%
AAAAAACAAGATCACAGGCC+AGG - tig0024677:57880-57899 Msa1419190:intron 40.0%
! TGAGGCCTTTGTGATGTTTT+TGG - tig0024677:57977-57996 Msa1419190:intron 40.0%
! TCAATAATAGAGTGGTGGGA+TGG + tig0024677:58096-58115 None:intergenic 40.0%
GTCAATCAAGCCACTATGTT+TGG - tig0024677:58122-58141 Msa1419190:intron 40.0%
!!! CCAGGTTTTGAACCATTGTA+TGG + tig0024677:58355-58374 None:intergenic 40.0%
CCATACAATGGTTCAAAACC+TGG - tig0024677:58352-58371 Msa1419190:intron 40.0%
AAAAGCCTAGTCCAAGTCAT+AGG + tig0024677:58378-58397 None:intergenic 40.0%
GTTAGTGCAGGAAGAAAGAT+GGG + tig0024677:58419-58438 None:intergenic 40.0%
AGTTAGTGCAGGAAGAAAGA+TGG + tig0024677:58420-58439 None:intergenic 40.0%
! AGAGAGTGCACGTTTGAAAA+TGG - tig0024677:58507-58526 Msa1419190:CDS 40.0%
!! AATGATGTTGGTGATGGTGA+TGG - tig0024677:58887-58906 Msa1419190:intron 40.0%
CCACCAAAACAGTAGAAACA+AGG + tig0024677:59100-59119 None:intergenic 40.0%
!!! CCTTGTTTCTACTGTTTTGG+TGG - tig0024677:59097-59116 Msa1419190:CDS 40.0%
CAGAAAGAGTGAACAGCAAA+GGG + tig0024677:59181-59200 None:intergenic 40.0%
ACAGAAAGAGTGAACAGCAA+AGG + tig0024677:59182-59201 None:intergenic 40.0%
!! TTTGGTTCTTGATAGAGACG+AGG - tig0024677:59624-59643 Msa1419190:intron 40.0%
ACTTACAGTTCTCCACTAGA+AGG + tig0024677:59701-59720 None:intergenic 40.0%
CTGTTGATCATGCTTGAGAA+TGG + tig0024677:60021-60040 None:intergenic 40.0%
CCATTCTCATGCATGAACAA+CGG - tig0024677:60114-60133 Msa1419190:intron 40.0%
CACTGCAATCTTCATTTGTG+AGG - tig0024677:60376-60395 Msa1419190:CDS 40.0%
TTCATTTGTGAGGCCATTGT+TGG - tig0024677:60386-60405 Msa1419190:CDS 40.0%
TACTACCATGGTTCAAAACC+TGG - tig0024677:60437-60456 Msa1419190:CDS 40.0%
! GAAAAATCAAACTAGTGGGC+CGG - tig0024677:60711-60730 Msa1419190:CDS 40.0%
TTAATCCAACGAACTGAGAC+CGG + tig0024677:60733-60752 None:intergenic 40.0%
CAGTTCTGCTCAATTTCAAG+AGG - tig0024677:60757-60776 Msa1419190:CDS 40.0%
! AACTTCTTTTGCCTCTTGGA+AGG + tig0024677:60800-60819 None:intergenic 40.0%
! TGGTAACTTCTTTTGCCTCT+TGG + tig0024677:60804-60823 None:intergenic 40.0%
TAACCTACCACTTGAAGTTG+AGG - tig0024677:60856-60875 Msa1419190:intron 40.0%
AACCTACCACTTGAAGTTGA+GGG - tig0024677:60857-60876 Msa1419190:intron 40.0%
ATATCACCCTCAACTTCAAG+TGG + tig0024677:60866-60885 None:intergenic 40.0%
ACCAATGACAATCCAATGGA+AGG - tig0024677:60953-60972 Msa1419190:intron 40.0%
ACCTTCCATTGGATTGTCAT+TGG + tig0024677:60957-60976 None:intergenic 40.0%
! ATGTGGTGGTGATGATGAAA+TGG + tig0024677:61020-61039 None:intergenic 40.0%
! CTTTTGTTACTACAGTGCTC+TGG - tig0024677:61068-61087 Msa1419190:intron 40.0%
!! GTTATTGGTTGGCTTTCTGT+TGG - tig0024677:61187-61206 Msa1419190:intron 40.0%
TTCAGTTAGGGTCCTATTGT+TGG - tig0024677:61233-61252 Msa1419190:intron 40.0%
TCAGTTAGGGTCCTATTGTT+GGG - tig0024677:61234-61253 Msa1419190:intron 40.0%
GATAAGAGGAACCCAACAAT+AGG + tig0024677:61248-61267 None:intergenic 40.0%
GCCCATTTGTATCATTCAGT+TGG - tig0024677:61280-61299 Msa1419190:intron 40.0%
GAAGGCTATACCAAAGAAGA+AGG - tig0024677:61731-61750 Msa1419190:CDS 40.0%
TGTTCCTGAAAAAGGAGAGA+AGG - tig0024677:61865-61884 Msa1419190:CDS 40.0%
ACATACCAGAAGCAGACTTT+AGG - tig0024677:61999-62018 Msa1419190:intron 40.0%
CAAAAATGTAGACATCGAGC+GGG - tig0024677:62180-62199 Msa1419190:intron 40.0%
!!! ACTACTGATTTTTTGCCACC+CGG - tig0024677:62292-62311 Msa1419190:intron 40.0%
TGGGACTAAAATCCAAGCTT+CGG + tig0024677:62334-62353 None:intergenic 40.0%
!! TGGATTTTAGTCCCACTGAA+TGG - tig0024677:62339-62358 Msa1419190:intron 40.0%
! CTAGGGGAACATTCTGATTT+TGG - tig0024677:62412-62431 Msa1419190:intron 40.0%
TGGGATGACTCCAGTATTAT+TGG - tig0024677:62447-62466 Msa1419190:intron 40.0%
AAAACTTCAGCTTGAGTAGG+AGG + tig0024677:62608-62627 None:intergenic 40.0%
CGTAAATTCTGGTCAGTCTT+CGG - tig0024677:62796-62815 Msa1419190:CDS 40.0%
! GAAGCATTCCGAACTATCTT+CGG - tig0024677:62821-62840 Msa1419190:CDS 40.0%
!! AAGGTGTTGTAACTCTTCCA+TGG + tig0024677:62874-62893 None:intergenic 40.0%
GGAGGTAAAACATGAAACGA+TGG - tig0024677:62982-63001 Msa1419190:CDS 40.0%
TAGTAAAGAGATGGCAGCAA+TGG - tig0024677:63015-63034 Msa1419190:CDS 40.0%
GCAATTCAGACCAAGATATG+GGG - tig0024677:63080-63099 Msa1419190:CDS 40.0%
CAATTCAGACCAAGATATGG+GGG - tig0024677:63081-63100 Msa1419190:CDS 40.0%
ACCCCAAATGACCACAATAA+TGG - tig0024677:63124-63143 Msa1419190:CDS 40.0%
CCCATTATTGTGGTCATTTG+GGG + tig0024677:63128-63147 None:intergenic 40.0%
CCCCAAATGACCACAATAAT+GGG - tig0024677:63125-63144 Msa1419190:CDS 40.0%
GCCCATTATTGTGGTCATTT+GGG + tig0024677:63129-63148 None:intergenic 40.0%
AGCCCATTATTGTGGTCATT+TGG + tig0024677:63130-63149 None:intergenic 40.0%
CCTCATCATTATTTAGGCCA+TGG + tig0024677:63171-63190 None:intergenic 40.0%
CCATGGCCTAAATAATGATG+AGG - tig0024677:63168-63187 Msa1419190:CDS 40.0%
GGCCTACATTCATTACCATA+AGG - tig0024677:63220-63239 Msa1419190:intron 40.0%
AGGGTGACCAATATTCCTTA+TGG + tig0024677:63238-63257 None:intergenic 40.0%
!! GAGCAACCTTTTGATGACTT+TGG - tig0024677:63468-63487 Msa1419190:intron 40.0%
CTTCCCAGTCATGAAAAGAT+TGG + tig0024677:63539-63558 None:intergenic 40.0%
! TCAGATTGACTCATCAATGC+TGG - tig0024677:63573-63592 Msa1419190:intron 40.0%
AAACGACATCGTTATCGAGT+TGG + tig0024677:63750-63769 None:intergenic 40.0%
AACTCGATAACGATGTCGTT+TGG - tig0024677:63749-63768 Msa1419190:CDS 40.0%
GCCAGATTGTTGAATCACAA+AGG - tig0024677:63825-63844 Msa1419190:intron 40.0%
CGTAATATTACCAGCTGCAG+AGG - tig0024677:56736-56755 Msa1419190:three_prime_UTR 45.0%
GCCAAGAAAGAGAGAAACAG+TGG + tig0024677:57116-57135 None:intergenic 45.0%
ACATCGGTGCACAACTCAAA+CGG - tig0024677:57218-57237 Msa1419190:CDS 45.0%
ACTTACGGTTCTCCACTACA+AGG + tig0024677:57253-57272 None:intergenic 45.0%
GCAGAGGACTTTGTAATGTC+TGG + tig0024677:57472-57491 None:intergenic 45.0%
GGAAGATCAATCCAAGTTGC+AGG - tig0024677:57688-57707 Msa1419190:CDS 45.0%
TTTGAGCAGATCCTGCAACT+TGG + tig0024677:57702-57721 None:intergenic 45.0%
ACCTGGAAGTTCAATCCAAG+TGG - tig0024677:57834-57853 Msa1419190:CDS 45.0%
ATGGAGAAGCTAGCATGGTA+TGG + tig0024677:58077-58096 None:intergenic 45.0%
TCAACTGTAAAATGGCCTCC+AGG - tig0024677:58202-58221 Msa1419190:intron 45.0%
CTCATTTGAGAGCTAGAGAG+TGG - tig0024677:58292-58311 Msa1419190:intron 45.0%
! CTAGAGAGTGGATTCTCTCT+TGG - tig0024677:58304-58323 Msa1419190:intron 45.0%
TCAAAACCTGGCCTATGACT+TGG - tig0024677:58364-58383 Msa1419190:intron 45.0%
GAGTGCACGTTTGAAAATGG+AGG - tig0024677:58510-58529 Msa1419190:intron 45.0%
TGAATGATCCACGATCGACA+AGG + tig0024677:58769-58788 None:intergenic 45.0%
AGTGACACTGAGGGAATCTT+TGG + tig0024677:58809-58828 None:intergenic 45.0%
!! GTAGGGGTGTTACCTTTCAT+TGG + tig0024677:58965-58984 None:intergenic 45.0%
! GCCCTTTTGCATCATTCAGT+AGG - tig0024677:59264-59283 Msa1419190:intron 45.0%
GCAGACACATCGTTTGTACA+CGG + tig0024677:59425-59444 None:intergenic 45.0%
TCTCCACTAGAAGGTTGCAT+GGG + tig0024677:59692-59711 None:intergenic 45.0%
TTCTCCACTAGAAGGTTGCA+TGG + tig0024677:59693-59712 None:intergenic 45.0%
AATTCAACTCAGCCAATGGC+TGG + tig0024677:59757-59776 None:intergenic 45.0%
TTGAGAATGGATCGACTAGC+GGG + tig0024677:60008-60027 None:intergenic 45.0%
CTTGAGAATGGATCGACTAG+CGG + tig0024677:60009-60028 None:intergenic 45.0%
CCGTTGTTCATGCATGAGAA+TGG + tig0024677:60117-60136 None:intergenic 45.0%
AAAAAGCAAGATCACAGGCC+AGG - tig0024677:60296-60315 Msa1419190:intron 45.0%
GCAAAGCATGTTGGAAAACC+TGG + tig0024677:60317-60336 None:intergenic 45.0%
!!! ACATGCCAGGTTTTGAACCA+TGG + tig0024677:60445-60464 None:intergenic 45.0%
TGTAGTCAAAGTCACATGCC+AGG + tig0024677:60458-60477 None:intergenic 45.0%
CAAGAGGACCTTGTTGATCA+TGG - tig0024677:60773-60792 Msa1419190:CDS 45.0%
TGGAAGGTCCATGATCAACA+AGG + tig0024677:60784-60803 None:intergenic 45.0%
TTGATCATGGACCTTCCAAG+AGG - tig0024677:60786-60805 Msa1419190:intron 45.0%
GCAGACACATCGTTTGTACA+TGG + tig0024677:59425-59444 None:intergenic 45.0%
! ACAGCCTTCTCTCCTTTTTC+AGG + tig0024677:61872-61891 None:intergenic 45.0%
AGTATGACAACTTGCGTGAG+CGG - tig0024677:61957-61976 Msa1419190:intron 45.0%
CTTCTGGTATGTTGTCTGGA+CGG + tig0024677:61991-62010 None:intergenic 45.0%
TCTGCTTCTGGTATGTTGTC+TGG + tig0024677:61995-62014 None:intergenic 45.0%
!!! CTACTGATTTTTTGCCACCC+GGG - tig0024677:62293-62312 Msa1419190:intron 45.0%
!!! TACTGATTTTTTGCCACCCG+GGG - tig0024677:62294-62313 Msa1419190:intron 45.0%
CAGAATGTTCCCCTAGTAGT+TGG + tig0024677:62408-62427 None:intergenic 45.0%
TAAAGAGATGGCAGCAATGG+AGG - tig0024677:63018-63037 Msa1419190:CDS 45.0%
AAAGAGATGGCAGCAATGGA+GGG - tig0024677:63019-63038 Msa1419190:CDS 45.0%
AGACCAAGATATGGGGGATT+TGG - tig0024677:63087-63106 Msa1419190:CDS 45.0%
CATTCATCTACATCTGCCCA+TGG - tig0024677:63151-63170 Msa1419190:CDS 45.0%
AGAACAACATACCGACGACT+TGG - tig0024677:63497-63516 Msa1419190:intron 45.0%
GTCATCTTCTTCCAAGTCGT+CGG + tig0024677:63511-63530 None:intergenic 45.0%
ATTACCAGCTGCAGAGGTGA+TGG - tig0024677:56742-56761 Msa1419190:three_prime_UTR 50.0%
ATTACCATCACCTCTGCAGC+TGG + tig0024677:56749-56768 None:intergenic 50.0%
TCTCCACTACAAGGTGGCAT+GGG + tig0024677:57244-57263 None:intergenic 50.0%
TTCTCCACTACAAGGTGGCA+TGG + tig0024677:57245-57264 None:intergenic 50.0%
TACGGTTCTCCACTACAAGG+TGG + tig0024677:57250-57269 None:intergenic 50.0%
GCCACTTGGATTGAACTTCC+AGG + tig0024677:57838-57857 None:intergenic 50.0%
GGAAGTTCAATCCAAGTGGC+AGG - tig0024677:57838-57857 Msa1419190:CDS 50.0%
!! CATGGTATGGTGGTGGCAAA+TGG + tig0024677:58064-58083 None:intergenic 50.0%
AAGCTAGCATGGTATGGTGG+TGG + tig0024677:58071-58090 None:intergenic 50.0%
GAGAAGCTAGCATGGTATGG+TGG + tig0024677:58074-58093 None:intergenic 50.0%
! CACGATCGACAAGGTCCTTT+TGG + tig0024677:58760-58779 None:intergenic 50.0%
CAAAAGGACCTTGTCGATCG+TGG - tig0024677:58758-58777 Msa1419190:CDS 50.0%
!! TGTTGGTGATGGTGATGGTG+AGG - tig0024677:58892-58911 Msa1419190:intron 50.0%
!! GTTGGTGATGGTGATGGTGA+GGG - tig0024677:58893-58912 Msa1419190:intron 50.0%
AACACTGTTGCTCCAGCCAT+TGG - tig0024677:59742-59761 Msa1419190:CDS 50.0%
TGAGAATGGATCGACTAGCG+GGG + tig0024677:60007-60026 None:intergenic 50.0%
CCTCAGGTCATGCATGAGAA+TGG + tig0024677:60213-60232 None:intergenic 50.0%
CCATTCTCATGCATGACCTG+AGG - tig0024677:60210-60229 Msa1419190:intron 50.0%
AGCTGGAAGTTCAAGCCAAG+TGG - tig0024677:60250-60269 Msa1419190:intron 50.0%
TTTGAGCAGATCCTGCCACT+TGG + tig0024677:60268-60287 None:intergenic 50.0%
CACCCTCAACTTCAAGTGGT+AGG + tig0024677:60862-60881 None:intergenic 50.0%
!! GTAGGGGTGTTACCTTCCAT+TGG + tig0024677:60968-60987 None:intergenic 50.0%
GGGCTCCCCTTCTTCATTTA+AGG + tig0024677:61616-61635 None:intergenic 50.0%
AATGAAGAAGGGGAGCCCAT+TGG - tig0024677:61618-61637 Msa1419190:intron 50.0%
AGCTTCACAAGACCGAAGCT+TGG - tig0024677:62319-62338 Msa1419190:intron 50.0%
AACCACCAGCTCCAACTACT+AGG - tig0024677:62394-62413 Msa1419190:intron 50.0%
ACCACCAGCTCCAACTACTA+GGG - tig0024677:62395-62414 Msa1419190:intron 50.0%
GCAAGCTTCACTGAGGTTGT+TGG + tig0024677:62482-62501 None:intergenic 50.0%
ATTCAGGGCAAGCTTCACTG+AGG + tig0024677:62489-62508 None:intergenic 50.0%
CTATGTGTAGCGTGCAACCA+AGG - tig0024677:62571-62590 Msa1419190:intron 50.0%
AGGAGGCTCACAATCATCCT+TGG + tig0024677:62591-62610 None:intergenic 50.0%
AAGAGATGGCAGCAATGGAG+GGG - tig0024677:63020-63039 Msa1419190:CDS 50.0%
CTGCCAAATCCCCCATATCT+TGG + tig0024677:63093-63112 None:intergenic 50.0%
CAAGGCCGTGATTTACCTAC+AGG + tig0024677:63374-63393 None:intergenic 50.0%
TTTGCGCAGATCCTGCCACT+TGG + tig0024677:57852-57871 None:intergenic 55.0%
GTGGGATGGAGAAGCTAGCA+TGG + tig0024677:58082-58101 None:intergenic 55.0%
CCTAGTCCAAGTCATAGGCC+AGG + tig0024677:58373-58392 None:intergenic 55.0%
! CCTGGCCTATGACTTGGACT+AGG - tig0024677:58370-58389 Msa1419190:intron 55.0%
! CCAAACTAGTGGGCCACTCT+CGG - tig0024677:58696-58715 Msa1419190:CDS 55.0%
ATCCACCACCTAACCGAGAG+TGG + tig0024677:58712-58731 None:intergenic 55.0%
GGAAGTTCAAGCCAAGTGGC+AGG - tig0024677:60254-60273 Msa1419190:intron 55.0%
CCACCAGCTCCAACTACTAG+GGG - tig0024677:62396-62415 Msa1419190:intron 55.0%
GTTCCCCTAGTAGTTGGAGC+TGG + tig0024677:62402-62421 None:intergenic 55.0%
! GGAAAAGGAGGCACGCGACT+TGG - tig0024677:56927-56946 Msa1419190:three_prime_UTR 60.0%
! AAAGGAGGCACGCGACTTGG+AGG - tig0024677:56930-56949 Msa1419190:three_prime_UTR 60.0%
CCGAGAGTGGCCCACTAGTT+TGG + tig0024677:58699-58718 None:intergenic 60.0%
! CTAGTGGGCCACTCTCGGTT+AGG - tig0024677:58701-58720 Msa1419190:CDS 60.0%
CGGCCCATGCAACCTTCTAG+TGG - tig0024677:59686-59705 Msa1419190:intron 60.0%
! GGTCTTGTGAAGCTTGCCCC+GGG + tig0024677:62313-62332 None:intergenic 60.0%
! CGGTCTTGTGAAGCTTGCCC+CGG + tig0024677:62314-62333 None:intergenic 60.0%
CCCCTAGTAGTTGGAGCTGG+TGG + tig0024677:62399-62418 None:intergenic 60.0%
CGGCCCATGCCACCTTGTAG+TGG - tig0024677:57238-57257 Msa1419190:CDS 65.0%
GTGGGCCACTCTCGGTTAGG+TGG - tig0024677:58704-58723 Msa1419190:CDS 65.0%
GGCCACTCTCGGTTAGGTGG+TGG - tig0024677:58707-58726 Msa1419190:CDS 65.0%
GTGGGCCGGTCTCAGTTCGT+TGG - tig0024677:60725-60744 Msa1419190:CDS 65.0%
CTTGTGAAGCTTGCCCCGGG+TGG + tig0024677:62310-62329 None:intergenic 65.0%
CCATGGCAGCGCACTCTTCC+AGG + tig0024677:62857-62876 None:intergenic 65.0%
! CCTGGAAGAGTGCGCTGCCA+TGG - tig0024677:62854-62873 Msa1419190:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0024677 gene 56707 63963 56707 ID=Msa1419190;Name=Msa1419190
tig0024677 mRNA 56707 63963 56707 ID=Msa1419190-mRNA-1;Parent=Msa1419190;Name=Msa1419190-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.92|0.78|0.92|1|1|14|382|1003
tig0024677 exon 56707 57292 56707 ID=Msa1419190-mRNA-1:exon:795;Parent=Msa1419190-mRNA-1
tig0024677 exon 57481 57894 57481 ID=Msa1419190-mRNA-1:exon:794;Parent=Msa1419190-mRNA-1
tig0024677 exon 57982 58089 57982 ID=Msa1419190-mRNA-1:exon:793;Parent=Msa1419190-mRNA-1
tig0024677 exon 58434 58526 58434 ID=Msa1419190-mRNA-1:exon:792;Parent=Msa1419190-mRNA-1
tig0024677 exon 58613 58816 58613 ID=Msa1419190-mRNA-1:exon:791;Parent=Msa1419190-mRNA-1
tig0024677 exon 58894 59147 58894 ID=Msa1419190-mRNA-1:exon:790;Parent=Msa1419190-mRNA-1
tig0024677 exon 59696 59944 59696 ID=Msa1419190-mRNA-1:exon:789;Parent=Msa1419190-mRNA-1
tig0024677 exon 60353 60792 60353 ID=Msa1419190-mRNA-1:exon:788;Parent=Msa1419190-mRNA-1
tig0024677 exon 60956 61031 60956 ID=Msa1419190-mRNA-1:exon:787;Parent=Msa1419190-mRNA-1
tig0024677 exon 61699 61965 61699 ID=Msa1419190-mRNA-1:exon:786;Parent=Msa1419190-mRNA-1
tig0024677 exon 62769 63214 62769 ID=Msa1419190-mRNA-1:exon:785;Parent=Msa1419190-mRNA-1
tig0024677 exon 63404 63479 63404 ID=Msa1419190-mRNA-1:exon:784;Parent=Msa1419190-mRNA-1
tig0024677 exon 63653 63776 63653 ID=Msa1419190-mRNA-1:exon:783;Parent=Msa1419190-mRNA-1
tig0024677 exon 63907 63963 63907 ID=Msa1419190-mRNA-1:exon:782;Parent=Msa1419190-mRNA-1
tig0024677 CDS 63907 63963 63907 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 CDS 63653 63776 63653 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 CDS 63404 63479 63404 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 CDS 62769 63214 62769 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 CDS 61699 61965 61699 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 CDS 60956 61031 60956 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 CDS 60353 60792 60353 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 CDS 59696 59944 59696 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 CDS 58894 59147 58894 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 CDS 58613 58816 58613 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 CDS 58434 58526 58434 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 CDS 57982 58089 57982 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 CDS 57481 57894 57481 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 CDS 57089 57292 57089 ID=Msa1419190-mRNA-1:cds;Parent=Msa1419190-mRNA-1
tig0024677 three_prime_UTR 56707 57088 56707 ID=Msa1419190-mRNA-1:three_prime_utr;Parent=Msa1419190-mRNA-1
Gene Sequence

>Msa1419190

ATGATCCGTTGTGTTGCAATATTCTGCTGCGTAATATTACCAGCTGCAGAGGTGATGGTTGAATTTTTTATCACAATGAAAGTAAATAAGGGAAAAGGAGGCACGCGACTTGGAGGAAAGACGAACAAAAAGAATAGTGAACAAAATGATGTTGAGACACATGTTAATGTGAACAATGATGAGATGAAGAATCCCAAAGATGATGTTTACATCGGTGCACAACTCAAACGGCCCATGCCACCTTGTAGTGGAGAACCGCTAGTAGATATTCCAGACATTACAAAGTCCTCTGCTGAATTGAATCAAAATTATAAATGCAAGTTGAGAACTTTTAAAGCAATGAAGCAAAGTTCTAGTTTAAATCAGGGGATGGAGCAAAGTTCTACTTTAAATCAAGCAAAAAATAAGAAAACAGTGATGACTACTATAGACTCTGCTGGGAGATCCATTCTCAAGCATGATCAAACGAAACAACAATCATTGACAGCTGGAAGATCAATCCAAGTTGCAGGATCTGCTCAAATGCAACATTCTACTTCAAAGCAAGCAAAAAATCAGAAAACACTGACGACTACTATAGAGAATGCTGTGAAGTCCATTCTAAAGAATGACCAAAGGATACAACAATCATTGACACCTGGAAGTTCAATCCAAGTGGCAGGATCTGCGCAAATACAACATAAAAAACAAGATCACAGGCCAGTGGGCCACTCTCGGTTAGGTGGTGGATTAAGCAACAGTTCTTCTGCTCAATTCCAAAAGGACCTTGTCGATCGTGGATCATTCAAAAAGCAAAAGACTACTCCAAAGATTCCCTCAGTGTCACTTGATCATTTTAAAAGGAATAAGCAACAACTTGAAGTTGAGGATGATATCAACCATGAAAATGATGTTGGTGATGGTGATGGTGAGGGTGATATTAACTATGAAAATGATGATGGCGAGAACACTAATGACACTCCAATGAAAGAGACGAGGAAGTCCAAAGCTGATGTTTACATTAGTTCACAACTCAAACGGCCCATGCAACCTTCTAGTGGAGAACTGTTAGAAGATATTCCAGAAAGTATAAAGTGGATGTTTTTGAAAGGATCTTTTTCAAAGCAAGGGATGGAGCAAAGTTCCACTTCAAAGCAACCAAAAAATCAGAAAACAAGGATGAGTACTATAGACCCCGCTAGTCGATCCATTCTCAAGCATGATCAACAGAAACAATGTTCCACTTCACAGCAAGCAAAAAATCAGAAAACAACAATGAGTGCTATAGACTCTGCTGTGAGATCCATTCTCATGCATGAACAACGGAAACAACGTTCCACTTTAAACCAAGCAAAAATTCAGAAAACAACGATGAGGGCTATAGACTCTGCTGTACGATCCATTCTCATGCATGACCTGAGGAAACAACAATCTTTGACAGCTGGAAGTTCAAGCCAAGTGGCAGGATCTGCTCAAATGCAACATAAAAAGCAAGATCACAGGCCAGTGGGCCGGTCTCAGTTCGTTGGATTAAGCAACAGTTCTGCTCAATTTCAAGAGGACCTTGTTGATCATGGACCTTCCAAGAGGCAAAAGAAGTTACCATCAATGTCACTTGATGATTATTTTAAAATGAATAACCTACCACTTGAAGTTGAGGGTGATATTAACTCTGAAAGTGATAATGGTGATGTTGAGGGTGATATAAACTATGAAAATGATGATGGTGAGAAAACCAATGACAATCCAATGGAAGGAGAAACATCAAAAAAAAGGAAAAGAGGAAGAGGAAGAACATTATGCTCGAGAATTCATGATCGGCCACTTGCTGAAAGAGAAGAAATCACCTTAAATGAAGAAGGGGAGCCCATTGGTCCAACTCAAAAGATAGTTTCTGAATTCAGCAATTTTTTGGGATCAGTAGCAAGGATGTCAGATTTATGTCCTCTTACTTACACTAATTGGAAGGCTATACCAAAGAAGAAGGAGAATATATGGGCTTATGTCAATAAAAGATACATTGTTCCTGAAAAAGGAGAGAAGGCTGTCTATGCTATAATAAATGATGCTTGGAGACGGTACAAATATGTTATTAAGAGAAATCATTTCACGAAGTATGACAACTTGCGTGAGCGGATGAAAAACCGTCCAGACAACATACCAGAAGCAGACTTTAGGAAATTAATGATTTATTGGGGAATTGAAACCGTTCAAGAAATTGGTCGTCAAAATGCTAAAATTACAGCTCAACAAAAATGTAGACATCGAGCGGGTCCCATAAGCTTTGCTATCATAAGGGAAAAACTGCGTGCAACCAAGGATGATTGTGAGCCTCCTACTCAAGCTGAAGTTTTTATCGAAACACGACAAAGTAAGAAAGGAAATCAGCTTGACCAAGTTACCAGTAACACAATTACAAATCTTCAAGATTTGATCGTAAATTCTGGTCAGTCTTCGGATGAAGCATTCCGAACTATCTTCGGTAAAGAAAAACCTGGAAGAGTGCGCTGCCATGGAAGAGTTACAACACCTTCTCTCTTGAAAAGAAGTAAAGAAATTGGAGAAATTAAAAAAAAGCATGCTATTGAGGTGAAAAATTTAAGTGACAAGATTCAAGAAATGGAGGTAAAACATGAAACGATGGAGAAAAAACATAGTAAAGAGATGGCAGCAATGGAGGGGAAATTGCAAGTTCTTCTAAGGTTCATGCTGTACCAAAGCAATTCAGACCAAGATATGGGGGATTTGGCAGCTTTGCTGTCAACCCCAAATGACCACAATAATGGGCTACATTCATCTACATCTGCCCATGGCCTAAATAATGATGAGGTAAATCACGGCCTTGAAGAACAATTGTCTGATGACTTTGAAGAAGATGATGAAGAACAACCTTTTGATGACTTGGAAGATGATAATGAAGAGCAACCTTTTGATGACTTTGGAAATGAAGAACAACATACCGACGACTTGGAAGAAGATGACGAAGACCAATCTTTTCATGACTGGGAAGAAGATGAAGAATATTCAGATTGA

Protein sequence

>Msa1419190

MIRCVAIFCCVILPAAEVMVEFFITMKVNKGKGGTRLGGKTNKKNSEQNDVETHVNVNNDEMKNPKDDVYIGAQLKRPMPPCSGEPLVDIPDITKSSAELNQNYKCKLRTFKAMKQSSSLNQGMEQSSTLNQAKNKKTVMTTIDSAGRSILKHDQTKQQSLTAGRSIQVAGSAQMQHSTSKQAKNQKTLTTTIENAVKSILKNDQRIQQSLTPGSSIQVAGSAQIQHKKQDHRPVGHSRLGGGLSNSSSAQFQKDLVDRGSFKKQKTTPKIPSVSLDHFKRNKQQLEVEDDINHENDVGDGDGEGDINYENDDGENTNDTPMKETRKSKADVYISSQLKRPMQPSSGELLEDIPESIKWMFLKGSFSKQGMEQSSTSKQPKNQKTRMSTIDPASRSILKHDQQKQCSTSQQAKNQKTTMSAIDSAVRSILMHEQRKQRSTLNQAKIQKTTMRAIDSAVRSILMHDLRKQQSLTAGSSSQVAGSAQMQHKKQDHRPVGRSQFVGLSNSSAQFQEDLVDHGPSKRQKKLPSMSLDDYFKMNNLPLEVEGDINSESDNGDVEGDINYENDDGEKTNDNPMEGETSKKRKRGRGRTLCSRIHDRPLAEREEITLNEEGEPIGPTQKIVSEFSNFLGSVARMSDLCPLTYTNWKAIPKKKENIWAYVNKRYIVPEKGEKAVYAIINDAWRRYKYVIKRNHFTKYDNLRERMKNRPDNIPEADFRKLMIYWGIETVQEIGRQNAKITAQQKCRHRAGPISFAIIREKLRATKDDCEPPTQAEVFIETRQSKKGNQLDQVTSNTITNLQDLIVNSGQSSDEAFRTIFGKEKPGRVRCHGRVTTPSLLKRSKEIGEIKKKHAIEVKNLSDKIQEMEVKHETMEKKHSKEMAAMEGKLQVLLRFMLYQSNSDQDMGDLAALLSTPNDHNNGLHSSTSAHGLNNDEVNHGLEEQLSDDFEEDDEEQPFDDLEDDNEEQPFDDFGNEEQHTDDLEEDDEDQSFHDWEEDEEYSD*