AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0171850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171850 MtrunA17_Chr1g0190001 99.571 699 3 0 1 699 1 699 0.0 1434
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171850 AT1G71270.1 83.236 686 114 1 14 699 23 707 0.0 1198
Msa0171850 AT1G71300.2 77.681 690 147 2 16 699 13 701 0.0 1122
Msa0171850 AT1G71300.1 73.370 736 143 5 16 699 13 747 0.0 1103

Find 152 sgRNAs with CRISPR-Local

Find 625 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACACTTTGTTGAAGTATT+TGG 0.142382 1_4:-56683411 None:intergenic
AAAACATACATTGGATATTA+TGG 0.143109 1_4:-56689745 None:intergenic
AAACTCACTTGTACTTTAAA+AGG 0.194550 1_4:-56683432 None:intergenic
GCAACATCCTATGATTTAAT+TGG 0.226169 1_4:+56684799 Msa0171850:CDS
AAGTATTTGGATATTTGTTT+TGG 0.230134 1_4:-56683398 None:intergenic
ATTCCAGCAACTAAGATCTT+AGG 0.236093 1_4:+56690009 Msa0171850:three_prime_UTR
TACATTGGATATTATGGATT+TGG 0.243421 1_4:-56689739 None:intergenic
AGAAACACCGTTTGTAGTTT+TGG 0.244653 1_4:-56688374 None:intergenic
AACTCTGCTAAGTGGATTTC+AGG 0.248051 1_4:+56681353 Msa0171850:CDS
ATCCACTTAAACTCTGAGTT+TGG 0.250844 1_4:+56688189 Msa0171850:CDS
TATTATCACAATCATGAATT+TGG 0.261483 1_4:-56681314 None:intergenic
GCCATTGACGTGATGAGATT+TGG 0.261744 1_4:-56679574 None:intergenic
CTCATACATGATTGAAGATA+TGG 0.264600 1_4:-56689651 None:intergenic
GCAAGAGAAGTCTATGGATA+TGG 0.265601 1_4:+56681855 Msa0171850:CDS
CTCAATTTAATAAATTGATT+TGG 0.273151 1_4:+56690075 Msa0171850:three_prime_UTR
GCAACAGTTATAGGTTTATC+AGG 0.284406 1_4:-56689416 None:intergenic
CGCTTTATACTTACAGGCTT+TGG 0.287857 1_4:-56689269 None:intergenic
TCCACTTCCGCAACAGTTAT+AGG 0.293677 1_4:-56689425 None:intergenic
TTAGTATAATCTCTAAGTTT+TGG 0.301178 1_4:-56681015 None:intergenic
TCCACTTAAACTCTGAGTTT+GGG 0.308316 1_4:+56688190 Msa0171850:CDS
AGTGGAGTTGGATTCAATTC+AGG 0.310032 1_4:+56681062 Msa0171850:CDS
TTGGTTTATACAGGTCCTTT+TGG 0.364770 1_4:+56686497 Msa0171850:intron
GAGCTTGCAGAAGCTGCTTA+TGG 0.365008 1_4:+56685667 Msa0171850:CDS
CCATTGACGTGATGAGATTT+GGG 0.371241 1_4:-56679573 None:intergenic
CCTTCTAGTGCATTTGATCT+AGG 0.372542 1_4:+56679858 Msa0171850:CDS
ATTGCAGCTTGAACTGAATC+TGG 0.380544 1_4:+56688292 Msa0171850:intron
TTAAATCATTAAAATGCTCT+TGG 0.392587 1_4:-56689231 None:intergenic
TGATAATATCTTGTCACATA+TGG 0.393000 1_4:+56681329 Msa0171850:CDS
CTCTGAGTTTGGGGATGGTC+AGG 0.393038 1_4:+56688200 Msa0171850:CDS
ACCTATAACTGTTGCGGAAG+TGG 0.396596 1_4:+56689424 Msa0171850:CDS
CTTCAATCATGTATGAGATT+AGG 0.397107 1_4:+56689657 Msa0171850:CDS
TCGGAGGCGGATTCCATGCT+TGG 0.397429 1_4:+56687044 Msa0171850:CDS
TTTAATAAATTGATTTGGAT+TGG 0.397531 1_4:+56690080 Msa0171850:three_prime_UTR
CCCACCAGGGATCCTCTTGA+TGG 0.398438 1_4:-56689603 None:intergenic
ATTTCAGGAAATTGATGAAC+CGG 0.399043 1_4:+56685583 Msa0171850:intron
ATCCCTAAGATCTTAGTTGC+TGG 0.401540 1_4:-56690012 None:intergenic
GCTGGAATGCCATGCACAAC+AGG 0.402165 1_4:-56689994 None:intergenic
ATCCATATGAAGTTCTGTTC+AGG 0.405654 1_4:+56685645 Msa0171850:CDS
TTTATTTACCAGGCTGAGAT+TGG 0.409163 1_4:+56681805 Msa0171850:intron
CAAATCAATTTATTAAATTG+AGG 0.411966 1_4:-56690074 None:intergenic
AATTCTGCAAGAGAAGTCTA+TGG 0.414810 1_4:+56681849 Msa0171850:CDS
TCGTATAGTAAAGTAGCAAT+TGG 0.417834 1_4:-56689568 None:intergenic
ATCGTTAGATGGACTTCAAC+AGG 0.417942 1_4:+56680047 Msa0171850:CDS
CCTATAGCATCATAGCAGTT+TGG 0.418595 1_4:-56686551 None:intergenic
CTCCTGAACAGAACTTCATA+TGG 0.421045 1_4:-56685647 None:intergenic
CTCTACACCAATTAAATCAT+AGG 0.428333 1_4:-56684806 None:intergenic
TTCCACAAACTTAGCCAGCT+TGG 0.428764 1_4:-56682207 None:intergenic
AATTATACAGAATGCAAATA+CGG 0.434615 1_4:+56689905 Msa0171850:three_prime_UTR
CCCCAAACTCAGAGTTTAAG+TGG 0.436616 1_4:-56688191 None:intergenic
CCCGTTAAGATCTTCTTCAA+TGG 0.437299 1_4:-56679901 None:intergenic
CAAAATTCAAATGCACTTTG+AGG 0.439404 1_4:+56688643 Msa0171850:CDS
GAAACTGAAGTTTGTAGAAG+TGG 0.448325 1_4:+56683114 Msa0171850:CDS
ACCATTGAAGAAGATCTTAA+CGG 0.451464 1_4:+56679900 Msa0171850:CDS
CCTAGATCAAATGCACTAGA+AGG 0.458119 1_4:-56679858 None:intergenic
CCAAACTGCTATGATGCTAT+AGG 0.459765 1_4:+56686551 Msa0171850:CDS
TGATTTGCGCAAAGTGGAGT+TGG 0.463004 1_4:+56681050 Msa0171850:CDS
ATTCTTCAACAATGGCAATT+CGG 0.463031 1_4:-56689829 None:intergenic
TCAATATTTCCCTATGGCCT+CGG 0.467395 1_4:+56688043 Msa0171850:CDS
CCATTGAAGAAGATCTTAAC+GGG 0.467598 1_4:+56679901 Msa0171850:CDS
AGCATTGGAGAAACTGCAAT+TGG 0.468009 1_4:+56684771 Msa0171850:CDS
TGCTCATCCATGACACCAAA+AGG 0.473405 1_4:-56686512 None:intergenic
ATATGGATATTTAATAGAGC+TGG 0.474130 1_4:-56685630 None:intergenic
GGCAGGTCAATATTTCCCTA+TGG 0.475047 1_4:+56688037 Msa0171850:intron
GTTTATCAGGACTCGATGTT+GGG 0.475291 1_4:-56689403 None:intergenic
CCGTGCTTACATACAAGCAT+TGG 0.475768 1_4:+56684756 Msa0171850:CDS
GGTTTATCAGGACTCGATGT+TGG 0.478071 1_4:-56689404 None:intergenic
TTCCAGCAACTAAGATCTTA+GGG 0.478658 1_4:+56690010 Msa0171850:three_prime_UTR
ATCCAAGCTGGCTAAGTTTG+TGG 0.479760 1_4:+56682205 Msa0171850:CDS
CATTATTATCCCTCCGAGAA+TGG 0.482423 1_4:+56682232 Msa0171850:CDS
CCTATGGCCTCGGTTTAAGA+TGG 0.482544 1_4:+56688053 Msa0171850:CDS
AAGAAGTCATAGTTATCTGT+TGG 0.483385 1_4:+56689708 Msa0171850:three_prime_UTR
TATATGTACCATTGTGTTTG+AGG 0.486517 1_4:-56679733 None:intergenic
TTGCATTCTGTATAATTCCA+TGG 0.489937 1_4:-56689899 None:intergenic
GAGCAATACAGCATTATTTG+TGG 0.490021 1_4:+56688676 Msa0171850:CDS
AACCTGAGCTTGAAAAGCTC+AGG 0.490108 1_4:+56683176 Msa0171850:CDS
CCCAAATCTCATCACGTCAA+TGG 0.498059 1_4:+56679573 Msa0171850:five_prime_UTR
ATGGTGGACATCCTTGTTGA+TGG 0.498798 1_4:+56682251 Msa0171850:CDS
AGTGATGATATATCGTTAGA+TGG 0.498874 1_4:+56680036 Msa0171850:intron
ACAAGGATGTCCACCATTCT+CGG 0.499451 1_4:-56682245 None:intergenic
AGCTCATTATGTCTCGGAGG+CGG 0.500639 1_4:+56687031 Msa0171850:intron
TCGCATAATACACCAGCATC+AGG 0.502459 1_4:+56686589 Msa0171850:CDS
CACAAAGCCAAAACTACAAA+CGG 0.504050 1_4:+56688367 Msa0171850:CDS
CAGGAAGCAGGTCCTGAAGC+TGG 0.508420 1_4:+56688620 Msa0171850:intron
CTTGATAAGTAAATCATCAA+TGG 0.510022 1_4:-56688330 None:intergenic
CAAGAGAAGTCTATGGATAT+GGG 0.510930 1_4:+56681856 Msa0171850:CDS
AGTCTATGGATATGGGTTTG+AGG 0.513380 1_4:+56681863 Msa0171850:CDS
ACAGCAGATCGATTCTTTAG+CGG 0.514662 1_4:-56684868 None:intergenic
GGATAGGATTAATATATTGA+AGG 0.519305 1_4:+56684903 Msa0171850:CDS
AAAACTTAGAGATTATACTA+AGG 0.519810 1_4:+56681017 Msa0171850:CDS
GAATCTGGAACGACTTAGAA+TGG 0.521290 1_4:+56688307 Msa0171850:CDS
GATTCCATCAAGAGGATCCC+TGG 0.522126 1_4:+56689599 Msa0171850:CDS
TGCAACAAATATCAAGTCCA+TGG 0.523909 1_4:+56689882 Msa0171850:three_prime_UTR
GTTGCAAATATACTATCTAA+AGG 0.530234 1_4:+56680991 Msa0171850:CDS
CATCTTAAACCGAGGCCATA+GGG 0.530347 1_4:-56688052 None:intergenic
TTGTTCAATGCAGACCCACC+AGG 0.531672 1_4:-56689617 None:intergenic
CGTATAGTAAAGTAGCAATT+GGG 0.531794 1_4:-56689567 None:intergenic
TATTTCAGCTCATTATGTCT+CGG 0.532355 1_4:+56687025 Msa0171850:intron
GAGCTGGCTTCAGCTATATG+AGG 0.536113 1_4:-56685614 None:intergenic
CCACTTAAACTCTGAGTTTG+GGG 0.538247 1_4:+56688191 Msa0171850:CDS
CCATCTTAAACCGAGGCCAT+AGG 0.544335 1_4:-56688053 None:intergenic
CAGGCAGAAAGCAGTCTCAA+AGG 0.545719 1_4:+56683195 Msa0171850:CDS
CATGCTTGATTCCAGGAAGC+AGG 0.549332 1_4:+56688608 Msa0171850:intron
GACTCTCTGATTCCATCAAG+AGG 0.549335 1_4:+56689591 Msa0171850:CDS
ATTATACAGAATGCAAATAC+GGG 0.550875 1_4:+56689906 Msa0171850:three_prime_UTR
AAACTTAGAGATTATACTAA+GGG 0.553199 1_4:+56681018 Msa0171850:CDS
GAATTGCCATTGTTGAAGAA+TGG 0.553471 1_4:+56689831 Msa0171850:three_prime_UTR
TGAGAATGATTTGCGCAAAG+TGG 0.554547 1_4:+56681044 Msa0171850:CDS
GCATCACCATTCTTCAACAA+TGG 0.555886 1_4:-56689837 None:intergenic
TTGCATTTCGCAAACTGTTG+AGG 0.557428 1_4:-56688089 None:intergenic
CTTGGATTCTTATTTAGACA+AGG 0.558627 1_4:+56687062 Msa0171850:CDS
GGAAGTGGAGCCACTGGTGA+AGG 0.561875 1_4:+56689439 Msa0171850:CDS
TAACGCCTCATGACATAATG+AGG 0.563593 1_4:-56688144 None:intergenic
GTATGTTGTTAACTTTCTCA+AGG 0.565046 1_4:+56683995 Msa0171850:CDS
GTTAACTTTCTCAAGGAACA+TGG 0.568981 1_4:+56684002 Msa0171850:CDS
TCTAAATAAGAATCCAAGCA+TGG 0.575363 1_4:-56687057 None:intergenic
TTAAACTCTGAGTTTGGGGA+TGG 0.578938 1_4:+56688195 Msa0171850:CDS
CCAATGCTTGTATGTAAGCA+CGG 0.580622 1_4:-56684756 None:intergenic
TGATTTAATCAAGTTTGTCA+AGG 0.581810 1_4:+56689246 Msa0171850:CDS
TGGTGGGTCTGCATTGAACA+AGG 0.583690 1_4:+56689619 Msa0171850:CDS
GTCAGAATGTTACCTGATGC+TGG 0.583853 1_4:-56686601 None:intergenic
TGATAAACCTATAACTGTTG+CGG 0.590582 1_4:+56689418 Msa0171850:CDS
CATATGGAAACTCTGCTAAG+TGG 0.592668 1_4:+56681345 Msa0171850:CDS
CAATTTCTACACAAACAAGA+TGG 0.602918 1_4:+56679701 Msa0171850:exon
GCTATATGAGGAATCAATGC+CGG 0.605953 1_4:-56685602 None:intergenic
ATAGGTGGCTGAATCCAAGC+TGG 0.607893 1_4:+56682193 Msa0171850:intron
TTCATCCTCATTATGTCATG+AGG 0.609555 1_4:+56688139 Msa0171850:CDS
TGTTGCGGAAGTGGAGCCAC+TGG 0.613209 1_4:+56689433 Msa0171850:CDS
ATGCAAATGTGAAGACATTG+TGG 0.614201 1_4:+56688106 Msa0171850:CDS
TGGACTTCAACAGGAGCTTG+AGG 0.615166 1_4:+56680056 Msa0171850:CDS
ATGAGATTTGGGAGACACGT+CGG 0.618823 1_4:-56679562 None:intergenic
TTTGATCTAGGAGCATTCGT+TGG 0.622940 1_4:+56679870 Msa0171850:CDS
TATTATCCCTCCGAGAATGG+TGG 0.631865 1_4:+56682235 Msa0171850:CDS
TGCAAATGTGAAGACATTGT+GGG 0.634645 1_4:+56688107 Msa0171850:CDS
TCGAATACCATCTTAAACCG+AGG 0.634683 1_4:-56688060 None:intergenic
GTTTGTAGAAGTGGACACAA+TGG 0.634918 1_4:+56683123 Msa0171850:CDS
TTATGTCATGAGGCGTTATG+CGG 0.635931 1_4:+56688149 Msa0171850:CDS
GGATGTCCACCATTCTCGGA+GGG 0.636579 1_4:-56682241 None:intergenic
TTTGAGGCTTAAGAATCGCA+AGG 0.639267 1_4:+56681879 Msa0171850:CDS
TTCAGCTCATTATGTCTCGG+AGG 0.639985 1_4:+56687028 Msa0171850:intron
CCATCAAGAGGATCCCTGGT+GGG 0.646372 1_4:+56689603 Msa0171850:CDS
ATGAGATTAGGAAATATTCG+AGG 0.647688 1_4:+56689669 Msa0171850:CDS
GGACATCCTTGTTGATGGAG+AGG 0.650934 1_4:+56682256 Msa0171850:CDS
TCCATCAAGAGGATCCCTGG+TGG 0.661975 1_4:+56689602 Msa0171850:CDS
CTTGCAAAATCCTTCACCAG+TGG 0.665825 1_4:-56689449 None:intergenic
AGATCAATGAAAGAGTGTTG+CGG 0.677146 1_4:-56679605 None:intergenic
TTATATTGATACAATGAACA+AGG 0.679968 1_4:+56684055 Msa0171850:CDS
TGTTCAATGCAGACCCACCA+GGG 0.681342 1_4:-56689616 None:intergenic
ATAATACCTCTCCATCAACA+AGG 0.682669 1_4:-56682262 None:intergenic
TGATGTCGCCTCAAACACAA+TGG 0.699806 1_4:+56679725 Msa0171850:CDS
AGGATGTCCACCATTCTCGG+AGG 0.702552 1_4:-56682242 None:intergenic
CTGCAGATATAATTTCTGTG+AGG 0.705047 1_4:+56685804 Msa0171850:intron
GTAGAGACAAGAAGCAACAG+CGG 0.747225 1_4:+56684823 Msa0171850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTTTTATATCAATATTTT+TGG + chr1_4:56680181-56680200 Msa0171850:intron 10.0%
!!! AAATTTTAATTTTATTTACC+AGG + chr1_4:56681795-56681814 Msa0171850:intron 10.0%
!! AGAAATTAATAAAACATTAT+TGG - chr1_4:56682317-56682336 None:intergenic 10.0%
!!! ATATATATTTTCTAATACTT+TGG + chr1_4:56682582-56682601 Msa0171850:intron 10.0%
!! TTGATCAATAAAAATATTAA+TGG - chr1_4:56684104-56684123 None:intergenic 10.0%
!! TGTTATATTATTCAATTATT+TGG - chr1_4:56686845-56686864 None:intergenic 10.0%
!! AATAAAATATATTAGACTAA+GGG - chr1_4:56687928-56687947 None:intergenic 10.0%
!! AAATAAAATATATTAGACTA+AGG - chr1_4:56687929-56687948 None:intergenic 10.0%
!!! TTGTAAAAAAAAAACATTTT+TGG + chr1_4:56689766-56689785 Msa0171850:three_prime_UTR 10.0%
!!! TTGTAATGTAATTTTTAATT+TGG + chr1_4:56689946-56689965 Msa0171850:three_prime_UTR 10.0%
!!! TGTAATGTAATTTTTAATTT+GGG + chr1_4:56689947-56689966 Msa0171850:three_prime_UTR 10.0%
!!! TAATAATCATTTTGGTAAAT+AGG - chr1_4:56680593-56680612 None:intergenic 15.0%
!!! TTTTTTTATATTCTTCTGAT+TGG + chr1_4:56680798-56680817 Msa0171850:intron 15.0%
!!! TCAATAATATCCTTTAAAAA+TGG + chr1_4:56681467-56681486 Msa0171850:intron 15.0%
!!! TAATGAAAGTATTTTACATT+TGG + chr1_4:56681527-56681546 Msa0171850:intron 15.0%
!! GTTCATTAATATTTCTTTAA+TGG + chr1_4:56682044-56682063 Msa0171850:intron 15.0%
!! ATTAATATTTCTTTAATGGT+TGG + chr1_4:56682048-56682067 Msa0171850:intron 15.0%
!!! GTTTTATTAATTTCTTTTTG+TGG + chr1_4:56682322-56682341 Msa0171850:intron 15.0%
!!! AAAAATTGATAATTGTAACA+TGG - chr1_4:56684600-56684619 None:intergenic 15.0%
!! ATATCTATATGTCTAAATAT+TGG - chr1_4:56684633-56684652 None:intergenic 15.0%
!!! AAATAAAAAGTATATAGCAA+AGG - chr1_4:56685224-56685243 None:intergenic 15.0%
!! AAAGAAATTCTTTAATCTAT+TGG - chr1_4:56685920-56685939 None:intergenic 15.0%
!! GCATTTAATATAATCAATAA+TGG + chr1_4:56686131-56686150 Msa0171850:intron 15.0%
!!! ATTTTCAGCAATTTTTTATT+GGG + chr1_4:56686170-56686189 Msa0171850:intron 15.0%
!!! AACTTTTTAAATAAATGCAT+TGG + chr1_4:56686291-56686310 Msa0171850:intron 15.0%
!!! AAAGGTACAAAAATAAAAAA+GGG - chr1_4:56686380-56686399 None:intergenic 15.0%
!!! AAAAGGTACAAAAATAAAAA+AGG - chr1_4:56686381-56686400 None:intergenic 15.0%
!!! TTTTTATTTTTGTACCTTTT+TGG + chr1_4:56686381-56686400 Msa0171850:intron 15.0%
!!! GTTTTTTTTTTTTTAACAAG+TGG - chr1_4:56689301-56689320 None:intergenic 15.0%
!!! TTTTTTTACAAAACATACAT+TGG - chr1_4:56689757-56689776 None:intergenic 15.0%
!! CAAATCAATTTATTAAATTG+AGG - chr1_4:56690077-56690096 None:intergenic 15.0%
!! CTCAATTTAATAAATTGATT+TGG + chr1_4:56690075-56690094 Msa0171850:three_prime_UTR 15.0%
!!! TTTAATAAATTGATTTGGAT+TGG + chr1_4:56690080-56690099 Msa0171850:three_prime_UTR 15.0%
!! AACTAAAACAGATTGTAATT+TGG - chr1_4:56679956-56679975 None:intergenic 20.0%
!! ATTAGTTGTGTTTATTTCAA+CGG + chr1_4:56680263-56680282 Msa0171850:intron 20.0%
!! TCTATTAACTACAACTAATA+AGG - chr1_4:56680316-56680335 None:intergenic 20.0%
!!! AATGAATAAGAGTATATTAG+TGG + chr1_4:56680358-56680377 Msa0171850:intron 20.0%
!! ACAAATAATCAATGTTTCAT+TGG + chr1_4:56680383-56680402 Msa0171850:intron 20.0%
!! GATATAATCCAATAATCAAT+AGG + chr1_4:56680635-56680654 Msa0171850:intron 20.0%
!! ACTCAAAATAATTCTTCAAT+TGG + chr1_4:56680735-56680754 Msa0171850:intron 20.0%
!! ATGCTTAAAGTGAAATTAAT+TGG - chr1_4:56680772-56680791 None:intergenic 20.0%
!!! TTAGTATAATCTCTAAGTTT+TGG - chr1_4:56681018-56681037 None:intergenic 20.0%
!! AAAACTTAGAGATTATACTA+AGG + chr1_4:56681017-56681036 Msa0171850:CDS 20.0%
!! AAACTTAGAGATTATACTAA+GGG + chr1_4:56681018-56681037 Msa0171850:CDS 20.0%
!! TAATATAATCCTGCAATAAA+TGG - chr1_4:56681263-56681282 None:intergenic 20.0%
!! TATTATCACAATCATGAATT+TGG - chr1_4:56681317-56681336 None:intergenic 20.0%
!!! ATAATATCCTTTAAAAATGG+TGG + chr1_4:56681470-56681489 Msa0171850:intron 20.0%
!!! AATTTTAATGTCTGAACTTA+TGG - chr1_4:56681833-56681852 None:intergenic 20.0%
!! CTTAGATCGTTTATATAAAA+TGG - chr1_4:56681910-56681929 None:intergenic 20.0%
!! TTAATAAAACATTATTGGAG+AGG - chr1_4:56682312-56682331 None:intergenic 20.0%
!!! TCATTTATTATCTAAGATCA+TGG + chr1_4:56682702-56682721 Msa0171850:intron 20.0%
!!! CAGAAATTTTCTTTTATTCT+GGG + chr1_4:56683275-56683294 Msa0171850:intron 20.0%
!!! AGTATTTGGATATTTGTTTT+GGG - chr1_4:56683400-56683419 None:intergenic 20.0%
!!! AAGTATTTGGATATTTGTTT+TGG - chr1_4:56683401-56683420 None:intergenic 20.0%
!! TAGATAAAATTGTACATTCA+AGG - chr1_4:56683716-56683735 None:intergenic 20.0%
!!! AAAACGTTTTCACAATTTAA+AGG - chr1_4:56683915-56683934 None:intergenic 20.0%
!!! TTTCGTTATTTTTGTAACTT+TGG + chr1_4:56683932-56683951 Msa0171850:intron 20.0%
!!! TTCGTTATTTTTGTAACTTT+GGG + chr1_4:56683933-56683952 Msa0171850:intron 20.0%
!!! AAATAGAAATGTAAAAGTGT+AGG + chr1_4:56683973-56683992 Msa0171850:intron 20.0%
!! TTATATTGATACAATGAACA+AGG + chr1_4:56684055-56684074 Msa0171850:CDS 20.0%
!! ATATAGATATTGAGTGAAAT+GGG + chr1_4:56684643-56684662 Msa0171850:intron 20.0%
!! AGATGGTATTATAAAACAAA+AGG - chr1_4:56684971-56684990 None:intergenic 20.0%
!! TACTTTGAATTATTTGCTTT+AGG + chr1_4:56685174-56685193 Msa0171850:intron 20.0%
!!! TTTGTGAAAGTTATATTTTG+TGG + chr1_4:56685241-56685260 Msa0171850:intron 20.0%
!! AATTATAAACGATGATTGAT+AGG + chr1_4:56685345-56685364 Msa0171850:intron 20.0%
!!! GTATAAATTTTGATTGAGTT+TGG - chr1_4:56685495-56685514 None:intergenic 20.0%
!! TGAAATAATGTCAAATCTTA+AGG - chr1_4:56685569-56685588 None:intergenic 20.0%
!! TTAAGATTTGACATTATTTC+AGG + chr1_4:56685568-56685587 Msa0171850:intron 20.0%
!!! ATGTTCTATGAAATTTTTTC+AGG + chr1_4:56685847-56685866 Msa0171850:CDS 20.0%
!! AAAATGAACTTTGTTAGATT+CGG + chr1_4:56685955-56685974 Msa0171850:intron 20.0%
!! TAATATAATCAATAATGGCA+TGG + chr1_4:56686136-56686155 Msa0171850:intron 20.0%
!! CAATAAAAAATTGCTGAAAA+TGG - chr1_4:56686171-56686190 None:intergenic 20.0%
!!! CATTTTCAGCAATTTTTTAT+TGG + chr1_4:56686169-56686188 Msa0171850:intron 20.0%
!! TGTTTGTTTATATACCAAAA+AGG - chr1_4:56686398-56686417 None:intergenic 20.0%
!!! AAGTTTTTCATTTTCAGATA+TGG + chr1_4:56686439-56686458 Msa0171850:intron 20.0%
!!! AGTTTTTCATTTTCAGATAT+GGG + chr1_4:56686440-56686459 Msa0171850:intron 20.0%
!! AGTTATAACATTGAAATTTC+TGG + chr1_4:56687237-56687256 Msa0171850:intron 20.0%
!! GTTATAACATTGAAATTTCT+GGG + chr1_4:56687238-56687257 Msa0171850:intron 20.0%
!! TTATAACATTGAAATTTCTG+GGG + chr1_4:56687239-56687258 Msa0171850:intron 20.0%
!! TTAAAGCTAATTCATAACTT+TGG + chr1_4:56688016-56688035 Msa0171850:intron 20.0%
!! TGCATTAGAAATTTACAAAA+AGG - chr1_4:56688256-56688275 None:intergenic 20.0%
!! AAATTAAAGTTCGTGTTTAA+TGG + chr1_4:56688736-56688755 Msa0171850:intron 20.0%
!!! TGTAATTTTCAAAAAGAAGA+TGG + chr1_4:56689086-56689105 Msa0171850:intron 20.0%
!!! GTAATTTTCAAAAAGAAGAT+GGG + chr1_4:56689087-56689106 Msa0171850:intron 20.0%
!! TTAAATCATTAAAATGCTCT+TGG - chr1_4:56689234-56689253 None:intergenic 20.0%
!!! ATTCAATATTTGCTAAACTA+TGG + chr1_4:56689349-56689368 Msa0171850:intron 20.0%
!!! TTCAATATTTGCTAAACTAT+GGG + chr1_4:56689350-56689369 Msa0171850:intron 20.0%
!! AAAACATACATTGGATATTA+TGG - chr1_4:56689748-56689767 None:intergenic 20.0%
!!! TAAGATTTTTTTACTCGTTT+TGG + chr1_4:56689791-56689810 Msa0171850:three_prime_UTR 20.0%
!!! AAGATTTTTTTACTCGTTTT+GGG + chr1_4:56689792-56689811 Msa0171850:three_prime_UTR 20.0%
!! AATTATACAGAATGCAAATA+CGG + chr1_4:56689905-56689924 Msa0171850:three_prime_UTR 20.0%
! CAAAATAATTCTTCAATTGG+AGG + chr1_4:56680738-56680757 Msa0171850:intron 25.0%
!! TAGCTAGAAGTATAATTGAA+AGG - chr1_4:56680919-56680938 None:intergenic 25.0%
! CTTAATAACTTACATATGTG+TGG - chr1_4:56680950-56680969 None:intergenic 25.0%
! GTTGCAAATATACTATCTAA+AGG + chr1_4:56680991-56681010 Msa0171850:CDS 25.0%
! TGATAATATCTTGTCACATA+TGG + chr1_4:56681329-56681348 Msa0171850:CDS 25.0%
!! ATTATTGACTAACTAAGAAC+TGG - chr1_4:56681455-56681474 None:intergenic 25.0%
!!! ACATTTACCACCATTTTTAA+AGG - chr1_4:56681480-56681499 None:intergenic 25.0%
!! AAATGTGTTTTCCTGATTTT+CGG + chr1_4:56681494-56681513 Msa0171850:intron 25.0%
!!! AAAGTATTTTACATTTGGAG+TGG + chr1_4:56681532-56681551 Msa0171850:intron 25.0%
! TTGTTTATTCGATCATTTGA+AGG + chr1_4:56681716-56681735 Msa0171850:intron 25.0%
! TCAATTAATATTACGCCAAA+AGG - chr1_4:56681960-56681979 None:intergenic 25.0%
!! AATTGATTATCAGTTTGTTC+TGG + chr1_4:56681974-56681993 Msa0171850:intron 25.0%
!!! TCTTGTTTTTTTCTCTCAAT+AGG + chr1_4:56682175-56682194 Msa0171850:intron 25.0%
!!! TCTCTTGTTTGATTTTGTTT+AGG + chr1_4:56682816-56682835 Msa0171850:intron 25.0%
! AGAAAGAAATCTAACTAGAA+GGG - chr1_4:56683034-56683053 None:intergenic 25.0%
! CATCAATAACAGTATTAGTA+TGG + chr1_4:56683225-56683244 Msa0171850:intron 25.0%
!! GCAGAAATTTTCTTTTATTC+TGG + chr1_4:56683274-56683293 Msa0171850:intron 25.0%
! AAACTCACTTGTACTTTAAA+AGG - chr1_4:56683435-56683454 None:intergenic 25.0%
! ATTCTGAATTCCTATTGATA+AGG + chr1_4:56683504-56683523 Msa0171850:intron 25.0%
! TAGATAAAACTAATTGCTAG+AGG - chr1_4:56683532-56683551 None:intergenic 25.0%
! TGTTATTGAACTACTATTGA+AGG + chr1_4:56683781-56683800 Msa0171850:intron 25.0%
! TTATCCTAAATAATGCTATG+AGG + chr1_4:56684128-56684147 Msa0171850:intron 25.0%
!!! TTTTTTGAAAACAACTTTGC+TGG - chr1_4:56684252-56684271 None:intergenic 25.0%
! TATGTATTCAATCAAAGTGT+AGG + chr1_4:56684355-56684374 Msa0171850:intron 25.0%
!!! TGGTAGCATTTTAAAATCTT+TGG + chr1_4:56684447-56684466 Msa0171850:intron 25.0%
!!! TTCATTCTATGTTAATTTGC+TGG + chr1_4:56684495-56684514 Msa0171850:intron 25.0%
! CATATAGATATTGAGTGAAA+TGG + chr1_4:56684642-56684661 Msa0171850:intron 25.0%
! GGATAGGATTAATATATTGA+AGG + chr1_4:56684903-56684922 Msa0171850:CDS 25.0%
! TTATGAGTTTATCCTCTAAA+GGG - chr1_4:56685318-56685337 None:intergenic 25.0%
! TTTATGAGTTTATCCTCTAA+AGG - chr1_4:56685319-56685338 None:intergenic 25.0%
! ATATGGATATTTAATAGAGC+TGG - chr1_4:56685633-56685652 None:intergenic 25.0%
! TGTCAACATGTATTTAACTA+GGG - chr1_4:56685770-56685789 None:intergenic 25.0%
! ATGTCAACATGTATTTAACT+AGG - chr1_4:56685771-56685790 None:intergenic 25.0%
!! AATTTCTGTGAGGATTTTTA+TGG + chr1_4:56685814-56685833 Msa0171850:CDS 25.0%
!! ATTTCTGTGAGGATTTTTAT+GGG + chr1_4:56685815-56685834 Msa0171850:CDS 25.0%
!!! AATTTTTTCAGGTATTGTGA+TGG + chr1_4:56685858-56685877 Msa0171850:intron 25.0%
!! GATGGAGTTTTTAAATTTTG+TGG + chr1_4:56685876-56685895 Msa0171850:intron 25.0%
! AAATTTAAACTATGCCAACA+TGG + chr1_4:56686005-56686024 Msa0171850:intron 25.0%
! AATTTAAACTATGCCAACAT+GGG + chr1_4:56686006-56686025 Msa0171850:intron 25.0%
! TTAAAGACAAAATGATACAG+TGG - chr1_4:56686421-56686440 None:intergenic 25.0%
!! TTTTCATTGGAATTTCAAGA+GGG - chr1_4:56686775-56686794 None:intergenic 25.0%
! TCAGTTTCAAATTGTTTGAA+AGG - chr1_4:56686995-56687014 None:intergenic 25.0%
!!! AAAATGAGGAGATATTTTTG+GGG - chr1_4:56687559-56687578 None:intergenic 25.0%
!! CAAAATGAGGAGATATTTTT+GGG - chr1_4:56687560-56687579 None:intergenic 25.0%
!! AAAATTTGATGACCAAAATG+AGG - chr1_4:56687573-56687592 None:intergenic 25.0%
! AATGTTCTCATAAAAAGTTG+AGG - chr1_4:56687653-56687672 None:intergenic 25.0%
!! TCAACTTTTTATGAGAACAT+TGG + chr1_4:56687652-56687671 Msa0171850:intron 25.0%
!!! TTAGCTTTAAATATGACTCA+AGG - chr1_4:56688006-56688025 None:intergenic 25.0%
! TAGAAATTTACAAAAAGGAG+TGG - chr1_4:56688251-56688270 None:intergenic 25.0%
! CTTGATAAGTAAATCATCAA+TGG - chr1_4:56688333-56688352 None:intergenic 25.0%
!!! TATCAATTTTGGAATATCCA+GGG + chr1_4:56688566-56688585 Msa0171850:intron 25.0%
! AGTTCTGTGTTAAATTAAGT+GGG + chr1_4:56688979-56688998 Msa0171850:intron 25.0%
! ATTTACTTGTTTCCTTTAGA+TGG - chr1_4:56689057-56689076 None:intergenic 25.0%
!! TGTATTCATTGATTATTTCG+TGG + chr1_4:56689114-56689133 Msa0171850:intron 25.0%
! TGATTTAATCAAGTTTGTCA+AGG + chr1_4:56689246-56689265 Msa0171850:CDS 25.0%
! TACATTGGATATTATGGATT+TGG - chr1_4:56689742-56689761 None:intergenic 25.0%
! ATTATACAGAATGCAAATAC+GGG + chr1_4:56689906-56689925 Msa0171850:three_prime_UTR 25.0%
! TTTGAAGAAGAAAAAGTGTG+AGG - chr1_4:56679632-56679651 None:intergenic 30.0%
CAATTTCTACACAAACAAGA+TGG + chr1_4:56679701-56679720 Msa0171850:exon 30.0%
TATATGTACCATTGTGTTTG+AGG - chr1_4:56679736-56679755 None:intergenic 30.0%
ACCATTGAAGAAGATCTTAA+CGG + chr1_4:56679900-56679919 Msa0171850:CDS 30.0%
AGTGATGATATATCGTTAGA+TGG + chr1_4:56680036-56680055 Msa0171850:intron 30.0%
GATCAACTATGCAATTTCAT+CGG - chr1_4:56680153-56680172 None:intergenic 30.0%
!!! TTTTTGGTTGTAGCTTTGTA+AGG + chr1_4:56680197-56680216 Msa0171850:intron 30.0%
TGTGCGTGATTCTTAAAAAA+AGG + chr1_4:56680240-56680259 Msa0171850:intron 30.0%
! AATTCATTGGTATTCTGAAG+TGG + chr1_4:56680506-56680525 Msa0171850:intron 30.0%
AGACACTTATAATGAGATGA+GGG + chr1_4:56680563-56680582 Msa0171850:intron 30.0%
! TACGCGGTTAATAATCATTT+TGG - chr1_4:56680601-56680620 None:intergenic 30.0%
TGTTTCTCAATTGAAGAGTT+TGG + chr1_4:56680677-56680696 Msa0171850:intron 30.0%
TTCTTTATGTGCATAGTCAA+AGG + chr1_4:56680857-56680876 Msa0171850:intron 30.0%
! AGAAGTATAATTGAAAGGCA+GGG - chr1_4:56680914-56680933 None:intergenic 30.0%
! TAGAAGTATAATTGAAAGGC+AGG - chr1_4:56680915-56680934 None:intergenic 30.0%
CAAAGAAGAAACAAAATGAG+TGG - chr1_4:56681118-56681137 None:intergenic 30.0%
AACAAAAATTGTCGAGATTG+TGG - chr1_4:56681560-56681579 None:intergenic 30.0%
ATATACTAACAGATCCTCAA+AGG - chr1_4:56681672-56681691 None:intergenic 30.0%
! TTCATAATTGTAGCACCTTT+TGG + chr1_4:56681942-56681961 Msa0171850:intron 30.0%
!! AGTTTGTTCTGGAAATCAAA+TGG + chr1_4:56681985-56682004 Msa0171850:intron 30.0%
TTCTATTCATGTTTGGATGA+GGG + chr1_4:56682073-56682092 Msa0171850:intron 30.0%
ACAGAAAAACTTAATTCGCT+GGG - chr1_4:56682120-56682139 None:intergenic 30.0%
TGTGTCGTATGTAGTATAAT+TGG + chr1_4:56682152-56682171 Msa0171850:intron 30.0%
!!! TGTTTTTTTCTCTCAATAGG+TGG + chr1_4:56682178-56682197 Msa0171850:intron 30.0%
AAACCTTATAAGTACTACCT+AGG - chr1_4:56682421-56682440 None:intergenic 30.0%
TAGGTAGTACTTATAAGGTT+TGG + chr1_4:56682420-56682439 Msa0171850:intron 30.0%
!! ACCTTATAAGTCAGTTTTGT+GGG + chr1_4:56682452-56682471 Msa0171850:intron 30.0%
TACCTTAAATTCAGGACTTA+GGG - chr1_4:56682488-56682507 None:intergenic 30.0%
ATACCTTAAATTCAGGACTT+AGG - chr1_4:56682489-56682508 None:intergenic 30.0%
GCAAACAATACCTTAAATTC+AGG - chr1_4:56682496-56682515 None:intergenic 30.0%
TCCTTAGAGAATCAACTAAA+AGG + chr1_4:56682753-56682772 Msa0171850:intron 30.0%
!! TCCTTTTAGTTGATTCTCTA+AGG - chr1_4:56682757-56682776 None:intergenic 30.0%
!!! ATTGACAGTTTTATTGTTGC+TGG + chr1_4:56682862-56682881 Msa0171850:intron 30.0%
GAGAAAGAAATCTAACTAGA+AGG - chr1_4:56683035-56683054 None:intergenic 30.0%
GTTAGATTTCTTTCTCACTT+TGG + chr1_4:56683039-56683058 Msa0171850:intron 30.0%
! TTTAGAATGCTATAGCTTGA+TGG + chr1_4:56683466-56683485 Msa0171850:intron 30.0%
!!! CTATTCATTGCTATTTTGAC+TGG + chr1_4:56683649-56683668 Msa0171850:intron 30.0%
! ACGTTTTCACAATTTAAAGG+TGG - chr1_4:56683912-56683931 None:intergenic 30.0%
GTATGTTGTTAACTTTCTCA+AGG + chr1_4:56683995-56684014 Msa0171850:CDS 30.0%
!!! AAAACTAGCTTTTTGTCAAC+AGG - chr1_4:56684328-56684347 None:intergenic 30.0%
ACATAGAATGAAAGTAAGTC+AGG - chr1_4:56684487-56684506 None:intergenic 30.0%
! AATGGGTATAATGATTTTGC+AGG + chr1_4:56684660-56684679 Msa0171850:intron 30.0%
! ATGGGTATAATGATTTTGCA+GGG + chr1_4:56684661-56684680 Msa0171850:intron 30.0%
GCAACATCCTATGATTTAAT+TGG + chr1_4:56684799-56684818 Msa0171850:CDS 30.0%
CTCTACACCAATTAAATCAT+AGG - chr1_4:56684809-56684828 None:intergenic 30.0%
! ATAGTTTTTCCCTTTTTCCT+AGG - chr1_4:56684939-56684958 None:intergenic 30.0%
! GTCCATGTATTTCTTTTCAT+TGG + chr1_4:56685005-56685024 Msa0171850:intron 30.0%
CACCAATGAAAAGAAATACA+TGG - chr1_4:56685010-56685029 None:intergenic 30.0%
! AAGTTATATTTTGTGGTCCT+TGG + chr1_4:56685248-56685267 Msa0171850:intron 30.0%
!! TTCAACTGTTGATTCTTCAA+TGG + chr1_4:56685436-56685455 Msa0171850:intron 30.0%
ATTTCAGGAAATTGATGAAC+CGG + chr1_4:56685583-56685602 Msa0171850:intron 30.0%
AAATTATATCTGCAGATGCA+AGG - chr1_4:56685799-56685818 None:intergenic 30.0%
! TTTCTGTGAGGATTTTTATG+GGG + chr1_4:56685816-56685835 Msa0171850:CDS 30.0%
!!! TATGCCTTTTTGGTTTATAC+AGG + chr1_4:56686488-56686507 Msa0171850:intron 30.0%
AATTCTTGGAACAAGATGAT+GGG - chr1_4:56686739-56686758 None:intergenic 30.0%
AAATTCTTGGAACAAGATGA+TGG - chr1_4:56686740-56686759 None:intergenic 30.0%
! GTTTTCATTGGAATTTCAAG+AGG - chr1_4:56686776-56686795 None:intergenic 30.0%
CTGAAACATAAAATGCAGAT+TGG - chr1_4:56686907-56686926 None:intergenic 30.0%
TATTTCAGCTCATTATGTCT+CGG + chr1_4:56687025-56687044 Msa0171850:intron 30.0%
TCTAAATAAGAATCCAAGCA+TGG - chr1_4:56687060-56687079 None:intergenic 30.0%
! CTTGGATTCTTATTTAGACA+AGG + chr1_4:56687062-56687081 Msa0171850:CDS 30.0%
ATAGTTAGAATCCTCAAGAT+TGG + chr1_4:56687383-56687402 Msa0171850:intron 30.0%
TAGTTAGAATCCTCAAGATT+GGG + chr1_4:56687384-56687403 Msa0171850:intron 30.0%
! CCAAAATGAGGAGATATTTT+TGG - chr1_4:56687561-56687580 None:intergenic 30.0%
! CCAAAAATATCTCCTCATTT+TGG + chr1_4:56687558-56687577 Msa0171850:intron 30.0%
! AAGTTGAGGTTAGTCATATT+AGG - chr1_4:56687639-56687658 None:intergenic 30.0%
TATGACTTCTATAGGTAGAA+CGG - chr1_4:56687798-56687817 None:intergenic 30.0%
TAGTCATCTATGACTTCTAT+AGG - chr1_4:56687806-56687825 None:intergenic 30.0%
TATAGAAGTCATAGATGACT+AGG + chr1_4:56687805-56687824 Msa0171850:intron 30.0%
TTTCGTCATTGAACAATAGA+AGG - chr1_4:56687969-56687988 None:intergenic 30.0%
CTATTGTTCAATGACGAAAA+TGG + chr1_4:56687970-56687989 Msa0171850:intron 30.0%
!! GTTTTGTTCAAGTACTTTCT+AGG - chr1_4:56688504-56688523 None:intergenic 30.0%
AAAACTCCATTTCAAATTGC+TGG + chr1_4:56688519-56688538 Msa0171850:intron 30.0%
!! AAAGCTTGCTCTATCAATTT+TGG + chr1_4:56688555-56688574 Msa0171850:intron 30.0%
!!! CTATCAATTTTGGAATATCC+AGG + chr1_4:56688565-56688584 Msa0171850:intron 30.0%
CAAAATTCAAATGCACTTTG+AGG + chr1_4:56688643-56688662 Msa0171850:CDS 30.0%
!! CTTTAATTTGCAACAAAACC+AGG - chr1_4:56688725-56688744 None:intergenic 30.0%
!! TTGCTATTTCTTCACATTGT+TGG + chr1_4:56688795-56688814 Msa0171850:intron 30.0%
GAAACTATATTTCGACTAAG+TGG - chr1_4:56688844-56688863 None:intergenic 30.0%
! TCAAGACTGAAACTCTTTTT+CGG + chr1_4:56688892-56688911 Msa0171850:intron 30.0%
TAATTCATTTCCTTCAGATC+AGG - chr1_4:56688937-56688956 None:intergenic 30.0%
GAATTAGAAATAAGACTAGC+TGG + chr1_4:56688951-56688970 Msa0171850:intron 30.0%
GAGTTCTGTGTTAAATTAAG+TGG + chr1_4:56688978-56688997 Msa0171850:intron 30.0%
GTTCTGTGTTAAATTAAGTG+GGG + chr1_4:56688980-56688999 Msa0171850:intron 30.0%
TTCTGTGTTAAATTAAGTGG+GGG + chr1_4:56688981-56689000 Msa0171850:intron 30.0%
!! AATAGTTTGTTATCAGCAAG+TGG - chr1_4:56689020-56689039 None:intergenic 30.0%
! ATTTTTCTTTCAATCCTTGC+AGG + chr1_4:56689198-56689217 Msa0171850:intron 30.0%
ATGTAAATAAGATGCGACAT+TGG - chr1_4:56689331-56689350 None:intergenic 30.0%
TGATAAACCTATAACTGTTG+CGG + chr1_4:56689418-56689437 Msa0171850:CDS 30.0%
!!! TCTTTCAGCAATTTTTTGTG+CGG + chr1_4:56689518-56689537 Msa0171850:CDS 30.0%
CGTATAGTAAAGTAGCAATT+GGG - chr1_4:56689570-56689589 None:intergenic 30.0%
TCGTATAGTAAAGTAGCAAT+TGG - chr1_4:56689571-56689590 None:intergenic 30.0%
CTCATACATGATTGAAGATA+TGG - chr1_4:56689654-56689673 None:intergenic 30.0%
CTTCAATCATGTATGAGATT+AGG + chr1_4:56689657-56689676 Msa0171850:CDS 30.0%
ATGAGATTAGGAAATATTCG+AGG + chr1_4:56689669-56689688 Msa0171850:CDS 30.0%
AAGAAGTCATAGTTATCTGT+TGG + chr1_4:56689708-56689727 Msa0171850:three_prime_UTR 30.0%
ATTCTTCAACAATGGCAATT+CGG - chr1_4:56689832-56689851 None:intergenic 30.0%
TTGCATTCTGTATAATTCCA+TGG - chr1_4:56689902-56689921 None:intergenic 30.0%
!! AGATCAATGAAAGAGTGTTG+CGG - chr1_4:56679608-56679627 None:intergenic 35.0%
CAGTGTAACAGAAAACGTTA+TGG - chr1_4:56679764-56679783 None:intergenic 35.0%
GAAATGCGAATTCAGCAATT+TGG - chr1_4:56679805-56679824 None:intergenic 35.0%
CCATTGAAGAAGATCTTAAC+GGG + chr1_4:56679901-56679920 Msa0171850:CDS 35.0%
TTCATTGGTATTAACCCACT+TGG + chr1_4:56680398-56680417 Msa0171850:intron 35.0%
TCATTGGTATTAACCCACTT+GGG + chr1_4:56680399-56680418 Msa0171850:intron 35.0%
!! TTCTGAAGTGGCAATTAACT+TGG + chr1_4:56680518-56680537 Msa0171850:intron 35.0%
GAGACACTTATAATGAGATG+AGG + chr1_4:56680562-56680581 Msa0171850:intron 35.0%
TCGAATTGTTCTCATATACG+CGG - chr1_4:56680617-56680636 None:intergenic 35.0%
! CAAGGTCTCCTATTGATTAT+TGG - chr1_4:56680646-56680665 None:intergenic 35.0%
!! AATTGAAGAGTTTGGTGTAC+TGG + chr1_4:56680685-56680704 Msa0171850:intron 35.0%
!! ATTGAAGAGTTTGGTGTACT+GGG + chr1_4:56680686-56680705 Msa0171850:intron 35.0%
!! CTTCTGATTGGCTTCATTTA+AGG + chr1_4:56680810-56680829 Msa0171850:intron 35.0%
! TAAGTTGTTGTTCTCTGTGT+AGG + chr1_4:56680966-56680985 Msa0171850:intron 35.0%
! TAAGTGGATTTCAGGTATGT+TGG + chr1_4:56681361-56681380 Msa0171850:intron 35.0%
TGACTAACTAAGAACTGGTT+GGG - chr1_4:56681450-56681469 None:intergenic 35.0%
TTGACTAACTAAGAACTGGT+TGG - chr1_4:56681451-56681470 None:intergenic 35.0%
TAGACACTTCATTGTTGCAA+GGG - chr1_4:56681642-56681661 None:intergenic 35.0%
ATAGACACTTCATTGTTGCA+AGG - chr1_4:56681643-56681662 None:intergenic 35.0%
TTTATTTACCAGGCTGAGAT+TGG + chr1_4:56681805-56681824 Msa0171850:intron 35.0%
AATTCTGCAAGAGAAGTCTA+TGG + chr1_4:56681849-56681868 Msa0171850:CDS 35.0%
CAAGAGAAGTCTATGGATAT+GGG + chr1_4:56681856-56681875 Msa0171850:CDS 35.0%
GGAAATCAAATGGCATCAAA+AGG + chr1_4:56681995-56682014 Msa0171850:intron 35.0%
GTTGGACTTCTATTCATGTT+TGG + chr1_4:56682066-56682085 Msa0171850:intron 35.0%
CTTCTATTCATGTTTGGATG+AGG + chr1_4:56682072-56682091 Msa0171850:intron 35.0%
TCTATTCATGTTTGGATGAG+GGG + chr1_4:56682074-56682093 Msa0171850:intron 35.0%
GACAGAAAAACTTAATTCGC+TGG - chr1_4:56682121-56682140 None:intergenic 35.0%
ATAATACCTCTCCATCAACA+AGG - chr1_4:56682265-56682284 None:intergenic 35.0%
! CACCTTATAAGTCAGTTTTG+TGG + chr1_4:56682451-56682470 Msa0171850:intron 35.0%
! ACCCACAAAACTGACTTATA+AGG - chr1_4:56682456-56682475 None:intergenic 35.0%
CATAACAAATATTGCAGTGC+CGG + chr1_4:56682635-56682654 Msa0171850:intron 35.0%
GTGTTTATAATGTTGTGTGC+AGG - chr1_4:56682679-56682698 None:intergenic 35.0%
GCACACAACATTATAAACAC+TGG + chr1_4:56682679-56682698 Msa0171850:intron 35.0%
GCATTTGTAAACTAGTGTCT+TGG + chr1_4:56682724-56682743 Msa0171850:intron 35.0%
!! TTGGTCTTCTTTGGCATTTT+AGG + chr1_4:56682899-56682918 Msa0171850:intron 35.0%
CTAGAAGGGAATATACTAGT+AGG - chr1_4:56683020-56683039 None:intergenic 35.0%
GAAACTGAAGTTTGTAGAAG+TGG + chr1_4:56683114-56683133 Msa0171850:CDS 35.0%
TGGATGGATAACAGATGATA+TGG - chr1_4:56683328-56683347 None:intergenic 35.0%
! GGACACTTTGTTGAAGTATT+TGG - chr1_4:56683414-56683433 None:intergenic 35.0%
ATTTAAAGGTGGTTAACGCA+AGG - chr1_4:56683901-56683920 None:intergenic 35.0%
GTTAACTTTCTCAAGGAACA+TGG + chr1_4:56684002-56684021 Msa0171850:CDS 35.0%
CCATCCTCATAGCATTATTT+AGG - chr1_4:56684135-56684154 None:intergenic 35.0%
CCTAAATAATGCTATGAGGA+TGG + chr1_4:56684132-56684151 Msa0171850:intron 35.0%
AAACAACTTTGCTGGCATAT+GGG - chr1_4:56684244-56684263 None:intergenic 35.0%
AAAACAACTTTGCTGGCATA+TGG - chr1_4:56684245-56684264 None:intergenic 35.0%
TTGCTATAAACTTCACTTCG+GGG - chr1_4:56684419-56684438 None:intergenic 35.0%
! CTTGCTATAAACTTCACTTC+GGG - chr1_4:56684420-56684439 None:intergenic 35.0%
! CCTTGCTATAAACTTCACTT+CGG - chr1_4:56684421-56684440 None:intergenic 35.0%
!! AATCTTTGGTAGCTTTGAGT+TGG + chr1_4:56684461-56684480 Msa0171850:intron 35.0%
GAAAATAGAAGTCTTCCATG+TGG - chr1_4:56684534-56684553 None:intergenic 35.0%
TGTAATATGTATGAGCTGAG+TGG + chr1_4:56684556-56684575 Msa0171850:intron 35.0%
GTAATATGTATGAGCTGAGT+GGG + chr1_4:56684557-56684576 Msa0171850:intron 35.0%
TATGACTCAACCTAGGAAAA+AGG + chr1_4:56684926-56684945 Msa0171850:intron 35.0%
ATGACTCAACCTAGGAAAAA+GGG + chr1_4:56684927-56684946 Msa0171850:intron 35.0%
AAAGAAATACATGGACTCCT+CGG - chr1_4:56685001-56685020 None:intergenic 35.0%
! TAGTTCATTTTGAGCAGTGA+AGG + chr1_4:56685034-56685053 Msa0171850:intron 35.0%
AATTATATTTCCTGCCCCTA+GGG + chr1_4:56685115-56685134 Msa0171850:intron 35.0%
CAGTCACATTAACAATACCA+AGG - chr1_4:56685268-56685287 None:intergenic 35.0%
CTTGGTATTGTTAATGTGAC+TGG + chr1_4:56685266-56685285 Msa0171850:intron 35.0%
!! ACTGTTGATTCTTCAATGGA+AGG + chr1_4:56685440-56685459 Msa0171850:intron 35.0%
! TTTTACACTCTTTACTTGCG+AGG + chr1_4:56685467-56685486 Msa0171850:intron 35.0%
ATTGTGTAGTCATTGGGTTA+TGG + chr1_4:56685543-56685562 Msa0171850:intron 35.0%
ATCCATATGAAGTTCTGTTC+AGG + chr1_4:56685645-56685664 Msa0171850:CDS 35.0%
CTGCAGATATAATTTCTGTG+AGG + chr1_4:56685804-56685823 Msa0171850:intron 35.0%
!!! ACCATTTTTTGTTCCCATGT+TGG - chr1_4:56686022-56686041 None:intergenic 35.0%
CAATAATGGCATGGTAACAA+AGG + chr1_4:56686145-56686164 Msa0171850:intron 35.0%
AAATGCTAATGAGTTCCCTA+AGG + chr1_4:56686193-56686212 Msa0171850:intron 35.0%
AATGCTAATGAGTTCCCTAA+GGG + chr1_4:56686194-56686213 Msa0171850:intron 35.0%
AATATGCGTATTCAGTGCAT+TGG + chr1_4:56686254-56686273 Msa0171850:intron 35.0%
! TCATTTTCAGATATGGGTTC+AGG + chr1_4:56686446-56686465 Msa0171850:intron 35.0%
!! TATGGGTTCAGGTTTTGTAT+AGG + chr1_4:56686457-56686476 Msa0171850:intron 35.0%
! GGTCAATTGATATGCCTTTT+TGG + chr1_4:56686478-56686497 Msa0171850:intron 35.0%
AGGACCTGTATAAACCAAAA+AGG - chr1_4:56686495-56686514 None:intergenic 35.0%
! TTGGTTTATACAGGTCCTTT+TGG + chr1_4:56686497-56686516 Msa0171850:intron 35.0%
! AACATTCTGACTTGTAAGAG+TGG + chr1_4:56686613-56686632 Msa0171850:intron 35.0%
AAACCACATTGATGCTATTG+CGG + chr1_4:56686673-56686692 Msa0171850:intron 35.0%
GTTTGCATTACACCTTCTTT+AGG - chr1_4:56686699-56686718 None:intergenic 35.0%
GTGGCTATGAATCAAATTCT+TGG - chr1_4:56686753-56686772 None:intergenic 35.0%
GGTAATTGCTTCTCAAGATA+TGG - chr1_4:56686824-56686843 None:intergenic 35.0%
CCAACATTCACATTACTGTT+TGG - chr1_4:56686943-56686962 None:intergenic 35.0%
CCAAACAGTAATGTGAATGT+TGG + chr1_4:56686940-56686959 Msa0171850:intron 35.0%
AGAACCCTACAAGAATTGTA+GGG - chr1_4:56687207-56687226 None:intergenic 35.0%
!! CATTGAAATTTCTGGGGTAT+CGG + chr1_4:56687245-56687264 Msa0171850:intron 35.0%
ATCTGTACAACCAACATACA+TGG + chr1_4:56687355-56687374 Msa0171850:intron 35.0%
TCTGTACAACCAACATACAT+GGG + chr1_4:56687356-56687375 Msa0171850:intron 35.0%
ACTATGTTTCCCATGTATGT+TGG - chr1_4:56687368-56687387 None:intergenic 35.0%
GATGCTTATTCACTAGTTCA+TGG - chr1_4:56687492-56687511 None:intergenic 35.0%
GAAAAATGAAACCCGTAATG+AGG - chr1_4:56687615-56687634 None:intergenic 35.0%
! TTTTTATGAGAACATTGGCG+AGG + chr1_4:56687657-56687676 Msa0171850:intron 35.0%
! TTTTATGAGAACATTGGCGA+GGG + chr1_4:56687658-56687677 Msa0171850:intron 35.0%
!! TTTAACATGTCAGGTGTTGA+TGG - chr1_4:56687732-56687751 None:intergenic 35.0%
GACTAGACATTTAACATGTC+AGG - chr1_4:56687741-56687760 None:intergenic 35.0%
GAATTTCCATGGAGCAAAAA+TGG - chr1_4:56687763-56687782 None:intergenic 35.0%
AGCTAATTCATAACTTTGGC+AGG + chr1_4:56688020-56688039 Msa0171850:intron 35.0%
ATGCAAATGTGAAGACATTG+TGG + chr1_4:56688106-56688125 Msa0171850:CDS 35.0%
TGCAAATGTGAAGACATTGT+GGG + chr1_4:56688107-56688126 Msa0171850:CDS 35.0%
TTCATCCTCATTATGTCATG+AGG + chr1_4:56688139-56688158 Msa0171850:CDS 35.0%
ATCCACTTAAACTCTGAGTT+TGG + chr1_4:56688189-56688208 Msa0171850:CDS 35.0%
TCCACTTAAACTCTGAGTTT+GGG + chr1_4:56688190-56688209 Msa0171850:CDS 35.0%
AAAAGGAGTGGATGATTGAT+AGG - chr1_4:56688239-56688258 None:intergenic 35.0%
AGCTGCAATTAGTAAACAGA+TGG - chr1_4:56688281-56688300 None:intergenic 35.0%
!!! TTTTGGCTTTGTGAAGTTCT+TGG - chr1_4:56688360-56688379 None:intergenic 35.0%
CACAAAGCCAAAACTACAAA+CGG + chr1_4:56688367-56688386 Msa0171850:CDS 35.0%
! AGAAACACCGTTTGTAGTTT+TGG - chr1_4:56688377-56688396 None:intergenic 35.0%
!! TATGACAATCGCTGTTTTGA+AGG + chr1_4:56688412-56688431 Msa0171850:CDS 35.0%
AGCAAAAATTGAAGTTACCC+TGG - chr1_4:56688586-56688605 None:intergenic 35.0%
! ATTTGAATTTTGCCAGCTTC+AGG - chr1_4:56688635-56688654 None:intergenic 35.0%
GAGCAATACAGCATTATTTG+TGG + chr1_4:56688676-56688695 Msa0171850:CDS 35.0%
ATGACAATCACAACGCAAAT+TGG - chr1_4:56688872-56688891 None:intergenic 35.0%
!! TTCGGAAATTTTAGTGCTGT+CGG + chr1_4:56688910-56688929 Msa0171850:intron 35.0%
GAACTATGATCTCCATCTAA+AGG + chr1_4:56689042-56689061 Msa0171850:intron 35.0%
TGTCATCGCTTTATACTTAC+AGG - chr1_4:56689278-56689297 None:intergenic 35.0%
TGCATGAAATTTATCAGCTG+AGG + chr1_4:56689379-56689398 Msa0171850:intron 35.0%
GCAACAGTTATAGGTTTATC+AGG - chr1_4:56689419-56689438 None:intergenic 35.0%
GAATTGCCATTGTTGAAGAA+TGG + chr1_4:56689831-56689850 Msa0171850:three_prime_UTR 35.0%
TGCAACAAATATCAAGTCCA+TGG + chr1_4:56689882-56689901 Msa0171850:three_prime_UTR 35.0%
!!! TACTTTTTTCCTGTTGTGCA+TGG + chr1_4:56689985-56690004 Msa0171850:three_prime_UTR 35.0%
ATTCCAGCAACTAAGATCTT+AGG + chr1_4:56690009-56690028 Msa0171850:three_prime_UTR 35.0%
TTCCAGCAACTAAGATCTTA+GGG + chr1_4:56690010-56690029 Msa0171850:three_prime_UTR 35.0%
CCATTGACGTGATGAGATTT+GGG - chr1_4:56679576-56679595 None:intergenic 40.0%
CCTAGATCAAATGCACTAGA+AGG - chr1_4:56679861-56679880 None:intergenic 40.0%
CCTTCTAGTGCATTTGATCT+AGG + chr1_4:56679858-56679877 Msa0171850:CDS 40.0%
!! TTTGATCTAGGAGCATTCGT+TGG + chr1_4:56679870-56679889 Msa0171850:CDS 40.0%
CCCGTTAAGATCTTCTTCAA+TGG - chr1_4:56679904-56679923 None:intergenic 40.0%
! ATCGTTAGATGGACTTCAAC+AGG + chr1_4:56680047-56680066 Msa0171850:CDS 40.0%
AGAAACAAAACCGACAAGCA+AGG - chr1_4:56680664-56680683 None:intergenic 40.0%
! TGAGAATGATTTGCGCAAAG+TGG + chr1_4:56681044-56681063 Msa0171850:CDS 40.0%
AGTGGAGTTGGATTCAATTC+AGG + chr1_4:56681062-56681081 Msa0171850:CDS 40.0%
GTAGCGATGATCTTACATGT+AGG + chr1_4:56681181-56681200 Msa0171850:intron 40.0%
! ACAACTCTGCCATTTATTGC+AGG + chr1_4:56681251-56681270 Msa0171850:intron 40.0%
CATATGGAAACTCTGCTAAG+TGG + chr1_4:56681345-56681364 Msa0171850:CDS 40.0%
! AACTCTGCTAAGTGGATTTC+AGG + chr1_4:56681353-56681372 Msa0171850:CDS 40.0%
ATCTGTCTTGTCCGAAAATC+AGG - chr1_4:56681508-56681527 None:intergenic 40.0%
AGACACTTCATTGTTGCAAG+GGG - chr1_4:56681641-56681660 None:intergenic 40.0%
GTGTCTATTTACCACCTTTG+AGG + chr1_4:56681655-56681674 Msa0171850:intron 40.0%
TACTAACAGATCCTCAAAGG+TGG - chr1_4:56681669-56681688 None:intergenic 40.0%
GCAAGAGAAGTCTATGGATA+TGG + chr1_4:56681855-56681874 Msa0171850:CDS 40.0%
AGTCTATGGATATGGGTTTG+AGG + chr1_4:56681863-56681882 Msa0171850:CDS 40.0%
! TTTGAGGCTTAAGAATCGCA+AGG + chr1_4:56681879-56681898 Msa0171850:CDS 40.0%
ATACTACATACGACACATGC+AGG - chr1_4:56682149-56682168 None:intergenic 40.0%
CATTATTATCCCTCCGAGAA+TGG + chr1_4:56682232-56682251 Msa0171850:CDS 40.0%
TTTGTTGAGACTTGAGAGTC+CGG + chr1_4:56682377-56682396 Msa0171850:intron 40.0%
GTCCCTAAGTCCTGAATTTA+AGG + chr1_4:56682483-56682502 Msa0171850:intron 40.0%
! TTTGAAACAAGGGTCTGATC+TGG + chr1_4:56682551-56682570 Msa0171850:intron 40.0%
TGTAAACTAGTGTCTTGGCT+TGG + chr1_4:56682729-56682748 Msa0171850:intron 40.0%
GTAAACTAGTGTCTTGGCTT+GGG + chr1_4:56682730-56682749 Msa0171850:intron 40.0%
!! TAAAAGGAGTCTAGCTCTTC+TGG + chr1_4:56682769-56682788 Msa0171850:intron 40.0%
! TGTCTCTTCTTGGTCTTCTT+TGG + chr1_4:56682890-56682909 Msa0171850:intron 40.0%
! GTTGACATGCTTTTACATCG+AGG + chr1_4:56682927-56682946 Msa0171850:intron 40.0%
CAGCATGCATGTCAAGTATT+GGG - chr1_4:56682980-56682999 None:intergenic 40.0%
! TCTCACTTTGGATGCTTTTC+AGG + chr1_4:56683051-56683070 Msa0171850:intron 40.0%
GTTTGTAGAAGTGGACACAA+TGG + chr1_4:56683123-56683142 Msa0171850:CDS 40.0%
TGAAGTCAAATACCTGCAGA+TGG - chr1_4:56683348-56683367 None:intergenic 40.0%
GCTAGAGGAACCTTATCAAT+AGG - chr1_4:56683517-56683536 None:intergenic 40.0%
AACTCAACACCAGCAAACAT+GGG - chr1_4:56683567-56683586 None:intergenic 40.0%
AAACTCAACACCAGCAAACA+TGG - chr1_4:56683568-56683587 None:intergenic 40.0%
! TAACGCAAGGAGGTATACAA+TGG - chr1_4:56683888-56683907 None:intergenic 40.0%
!!! GGGAAATGCATTTTTAGTGG+GGG - chr1_4:56684398-56684417 None:intergenic 40.0%
!!! GGGGAAATGCATTTTTAGTG+GGG - chr1_4:56684399-56684418 None:intergenic 40.0%
!!! GGGGGAAATGCATTTTTAGT+GGG - chr1_4:56684400-56684419 None:intergenic 40.0%
TGCTATAAACTTCACTTCGG+GGG - chr1_4:56684418-56684437 None:intergenic 40.0%
CCGAAGTGAAGTTTATAGCA+AGG + chr1_4:56684418-56684437 Msa0171850:intron 40.0%
AGTTTATAGCAAGGTGCGAA+TGG + chr1_4:56684427-56684446 Msa0171850:intron 40.0%
! TGCACATATAGAGGAGCATA+AGG - chr1_4:56684718-56684737 None:intergenic 40.0%
TTATGCTCCTCTATATGTGC+AGG + chr1_4:56684717-56684736 Msa0171850:intron 40.0%
CTAAGAACCTGCACATATAG+AGG - chr1_4:56684727-56684746 None:intergenic 40.0%
CCAATGCTTGTATGTAAGCA+CGG - chr1_4:56684759-56684778 None:intergenic 40.0%
! AGCATTGGAGAAACTGCAAT+TGG + chr1_4:56684771-56684790 Msa0171850:CDS 40.0%
! ACAGCAGATCGATTCTTTAG+CGG - chr1_4:56684871-56684890 None:intergenic 40.0%
!!! GATCTGCTGTTTTTGCTCTT+GGG + chr1_4:56684881-56684900 Msa0171850:CDS 40.0%
!!! ATCTGCTGTTTTTGCTCTTG+GGG + chr1_4:56684882-56684901 Msa0171850:CDS 40.0%
! TTGAAGGTATGACTCAACCT+AGG + chr1_4:56684919-56684938 Msa0171850:intron 40.0%
AATACCATCTGAATTGACCG+AGG + chr1_4:56684981-56685000 Msa0171850:intron 40.0%
! AGTGAAGGTTAGTCAAGACT+AGG + chr1_4:56685049-56685068 Msa0171850:intron 40.0%
GAATTATATTTCCTGCCCCT+AGG + chr1_4:56685114-56685133 Msa0171850:intron 40.0%
!! AAGGGCATCTCTTTCTTTAG+AGG - chr1_4:56685300-56685319 None:intergenic 40.0%
AAGAAAGAGATGCCCTTTAG+AGG + chr1_4:56685303-56685322 Msa0171850:intron 40.0%
TGCAGAGATTGTGTAGTCAT+TGG + chr1_4:56685536-56685555 Msa0171850:intron 40.0%
GCAGAGATTGTGTAGTCATT+GGG + chr1_4:56685537-56685556 Msa0171850:intron 40.0%
GCTATATGAGGAATCAATGC+CGG - chr1_4:56685605-56685624 None:intergenic 40.0%
CTCCTGAACAGAACTTCATA+TGG - chr1_4:56685650-56685669 None:intergenic 40.0%
TATTAAGTGCCATAGCAAGC+TGG - chr1_4:56685716-56685735 None:intergenic 40.0%
! CTAGGGTTTTTATGCACAGA+AGG - chr1_4:56685753-56685772 None:intergenic 40.0%
GCCAACATGGGAACAAAAAA+TGG + chr1_4:56686018-56686037 Msa0171850:intron 40.0%
!! ACTCTTAAAGAGTGCCCTTA+GGG - chr1_4:56686211-56686230 None:intergenic 40.0%
!! AACTCTTAAAGAGTGCCCTT+AGG - chr1_4:56686212-56686231 None:intergenic 40.0%
CCTATAGCATCATAGCAGTT+TGG - chr1_4:56686554-56686573 None:intergenic 40.0%
CCAAACTGCTATGATGCTAT+AGG + chr1_4:56686551-56686570 Msa0171850:CDS 40.0%
GGTTTCAGTCTTCAGTAAGA+AGG + chr1_4:56686634-56686653 Msa0171850:intron 40.0%
TCATTGGAATTTCAAGAGGG+TGG - chr1_4:56686772-56686791 None:intergenic 40.0%
!!! AAAACTGACCCGTTGGTTTT+GGG + chr1_4:56686791-56686810 Msa0171850:intron 40.0%
GTTTGTATCCCAAAACCAAC+GGG - chr1_4:56686802-56686821 None:intergenic 40.0%
GGTTTGTATCCCAAAACCAA+CGG - chr1_4:56686803-56686822 None:intergenic 40.0%
CTTGACAGTGTGTTTATTGC+TGG + chr1_4:56687130-56687149 Msa0171850:intron 40.0%
AGTAGCCCTACAATTCTTGT+AGG + chr1_4:56687199-56687218 Msa0171850:intron 40.0%
GTAGCCCTACAATTCTTGTA+GGG + chr1_4:56687200-56687219 Msa0171850:intron 40.0%
CAGAACCCTACAAGAATTGT+AGG - chr1_4:56687208-56687227 None:intergenic 40.0%
GAACTATTTGACTGCTTAGC+TGG + chr1_4:56687273-56687292 Msa0171850:intron 40.0%
GTGAATAAGCATCTGCTACT+CGG + chr1_4:56687499-56687518 Msa0171850:intron 40.0%
AATGAAACCCGTAATGAGGA+AGG - chr1_4:56687611-56687630 None:intergenic 40.0%
TTTATGAGAACATTGGCGAG+GGG + chr1_4:56687659-56687678 Msa0171850:intron 40.0%
!! TCTAGTCCATTTTTGCTCCA+TGG + chr1_4:56687754-56687773 Msa0171850:intron 40.0%
GGGAAAACGTTGAATTTCCA+TGG - chr1_4:56687774-56687793 None:intergenic 40.0%
ACTTCTATAGGTAGAACGGA+GGG - chr1_4:56687794-56687813 None:intergenic 40.0%
! CCATCTAGAAAGTCTTGTCT+AGG - chr1_4:56687842-56687861 None:intergenic 40.0%
CCTAGACAAGACTTTCTAGA+TGG + chr1_4:56687839-56687858 Msa0171850:intron 40.0%
AGACAAGACTTTCTAGATGG+CGG + chr1_4:56687842-56687861 Msa0171850:intron 40.0%
TCAATATTTCCCTATGGCCT+CGG + chr1_4:56688043-56688062 Msa0171850:CDS 40.0%
TCGAATACCATCTTAAACCG+AGG - chr1_4:56688063-56688082 None:intergenic 40.0%
TTGCATTTCGCAAACTGTTG+AGG - chr1_4:56688092-56688111 None:intergenic 40.0%
TAACGCCTCATGACATAATG+AGG - chr1_4:56688147-56688166 None:intergenic 40.0%
! TTATGTCATGAGGCGTTATG+CGG + chr1_4:56688149-56688168 Msa0171850:CDS 40.0%
CCACTTAAACTCTGAGTTTG+GGG + chr1_4:56688191-56688210 Msa0171850:CDS 40.0%
TTAAACTCTGAGTTTGGGGA+TGG + chr1_4:56688195-56688214 Msa0171850:CDS 40.0%
ATTGCAGCTTGAACTGAATC+TGG + chr1_4:56688292-56688311 Msa0171850:intron 40.0%
! GAATCTGGAACGACTTAGAA+TGG + chr1_4:56688307-56688326 Msa0171850:CDS 40.0%
TCCATTTCAAATTGCTGGTG+TGG + chr1_4:56688524-56688543 Msa0171850:intron 40.0%
ACCACACCAGCAATTTGAAA+TGG - chr1_4:56688528-56688547 None:intergenic 40.0%
GCTTTCAATCCTTTCATACC+TGG + chr1_4:56688704-56688723 Msa0171850:intron 40.0%
GCAACAAAACCAGGTATGAA+AGG - chr1_4:56688716-56688735 None:intergenic 40.0%
CGCTTTATACTTACAGGCTT+TGG - chr1_4:56689272-56689291 None:intergenic 40.0%
GTTTATCAGGACTCGATGTT+GGG - chr1_4:56689406-56689425 None:intergenic 40.0%
! TGGTGAAGGATTTTGCAAGT+AGG + chr1_4:56689453-56689472 Msa0171850:CDS 40.0%
! TGAAGGATTTTGCAAGTAGG+TGG + chr1_4:56689456-56689475 Msa0171850:CDS 40.0%
!!! CAGCAATTTTTTGTGCGGTA+TGG + chr1_4:56689523-56689542 Msa0171850:CDS 40.0%
GCATCACCATTCTTCAACAA+TGG - chr1_4:56689840-56689859 None:intergenic 40.0%
ATCCCTAAGATCTTAGTTGC+TGG - chr1_4:56690015-56690034 None:intergenic 40.0%
ATGAGATTTGGGAGACACGT+CGG - chr1_4:56679565-56679584 None:intergenic 45.0%
CCCAAATCTCATCACGTCAA+TGG + chr1_4:56679573-56679592 Msa0171850:five_prime_UTR 45.0%
GCCATTGACGTGATGAGATT+TGG - chr1_4:56679577-56679596 None:intergenic 45.0%
TGATGTCGCCTCAAACACAA+TGG + chr1_4:56679725-56679744 Msa0171850:CDS 45.0%
GCACAACTCGTATGAGACAT+CGG - chr1_4:56680225-56680244 None:intergenic 45.0%
! TTGAGTAGAAGCACACTCCA+AGG - chr1_4:56680450-56680469 None:intergenic 45.0%
TTGGAGTGTGCTTCTACTCA+AGG + chr1_4:56680449-56680468 Msa0171850:intron 45.0%
CAATAGGAGACCTTGCTTGT+CGG + chr1_4:56680651-56680670 Msa0171850:intron 45.0%
AGGCAGGGACAACAAAAAGA+TGG - chr1_4:56680899-56680918 None:intergenic 45.0%
! TGATTTGCGCAAAGTGGAGT+TGG + chr1_4:56681050-56681069 Msa0171850:CDS 45.0%
!! TGGGTGGTTCTGCTTTTGAT+CGG - chr1_4:56681431-56681450 None:intergenic 45.0%
CTAACTAAGAACTGGTTGGG+TGG - chr1_4:56681447-56681466 None:intergenic 45.0%
TTATGGAACCAATCTCAGCC+TGG - chr1_4:56681816-56681835 None:intergenic 45.0%
ACTTAATTCGCTGGGTAGCA+GGG - chr1_4:56682112-56682131 None:intergenic 45.0%
AACTTAATTCGCTGGGTAGC+AGG - chr1_4:56682113-56682132 None:intergenic 45.0%
ATCCAAGCTGGCTAAGTTTG+TGG + chr1_4:56682205-56682224 Msa0171850:CDS 45.0%
TTCCACAAACTTAGCCAGCT+TGG - chr1_4:56682210-56682229 None:intergenic 45.0%
TATTATCCCTCCGAGAATGG+TGG + chr1_4:56682235-56682254 Msa0171850:CDS 45.0%
ACAAGGATGTCCACCATTCT+CGG - chr1_4:56682248-56682267 None:intergenic 45.0%
!! ATGGTGGACATCCTTGTTGA+TGG + chr1_4:56682251-56682270 Msa0171850:CDS 45.0%
!! TCCGGCATTGACTAGAGATA+GGG + chr1_4:56682395-56682414 Msa0171850:intron 45.0%
ATTGACTAGAGATAGGGCCT+AGG + chr1_4:56682401-56682420 Msa0171850:intron 45.0%
GGGCCTAGGTAGTACTTATA+AGG + chr1_4:56682415-56682434 Msa0171850:intron 45.0%
! TACATTTTTGCCAGCTGTCC+AGG + chr1_4:56682527-56682546 Msa0171850:intron 45.0%
!! CTGTCCAGGCTTTGAAACAA+GGG + chr1_4:56682541-56682560 Msa0171850:intron 45.0%
!! GCTGGTTTGATGTCTCTTCT+TGG + chr1_4:56682880-56682899 Msa0171850:intron 45.0%
!! CATGCATGTCAAGTATTGGG+TGG - chr1_4:56682977-56682996 None:intergenic 45.0%
GCAGCATGCATGTCAAGTAT+TGG - chr1_4:56682981-56683000 None:intergenic 45.0%
!!! GGATGCTTTTCAGGTCAATG+AGG + chr1_4:56683060-56683079 Msa0171850:intron 45.0%
AACCTGAGCTTGAAAAGCTC+AGG + chr1_4:56683176-56683195 Msa0171850:CDS 45.0%
TCTGTTATCCATCCATCTGC+AGG + chr1_4:56683333-56683352 Msa0171850:intron 45.0%
GTCAAATACCTGCAGATGGA+TGG - chr1_4:56683344-56683363 None:intergenic 45.0%
GCTAACAAGAGAACCAGTGA+AGG + chr1_4:56683850-56683869 Msa0171850:intron 45.0%
TAAAGGTGGTTAACGCAAGG+AGG - chr1_4:56683898-56683917 None:intergenic 45.0%
!! CGGGGGAAATGCATTTTTAG+TGG - chr1_4:56684401-56684420 None:intergenic 45.0%
GGCGTTAATGATGAACCACA+TGG + chr1_4:56684516-56684535 Msa0171850:intron 45.0%
CCGTGCTTACATACAAGCAT+TGG + chr1_4:56684756-56684775 Msa0171850:CDS 45.0%
!!! CGATCTGCTGTTTTTGCTCT+TGG + chr1_4:56684880-56684899 Msa0171850:CDS 45.0%
!!! CTGTTTTTGCTCTTGGGGAT+AGG + chr1_4:56684887-56684906 Msa0171850:CDS 45.0%
AAACCAGCAACAGATCCCTA+GGG - chr1_4:56685133-56685152 None:intergenic 45.0%
TAAACCAGCAACAGATCCCT+AGG - chr1_4:56685134-56685153 None:intergenic 45.0%
!! GCACTTAAGGGCACTCTTTA+AGG - chr1_4:56686334-56686353 None:intergenic 45.0%
!!! TACAGGTCCTTTTGGTGTCA+TGG + chr1_4:56686505-56686524 Msa0171850:intron 45.0%
TGCTCATCCATGACACCAAA+AGG - chr1_4:56686515-56686534 None:intergenic 45.0%
TCGCATAATACACCAGCATC+AGG + chr1_4:56686589-56686608 Msa0171850:CDS 45.0%
GTCAGAATGTTACCTGATGC+TGG - chr1_4:56686604-56686623 None:intergenic 45.0%
ATGCTATTGCGGCCTAAAGA+AGG + chr1_4:56686684-56686703 Msa0171850:intron 45.0%
TCCAATGAAAACTGACCCGT+TGG + chr1_4:56686784-56686803 Msa0171850:intron 45.0%
! ACCAACGGGTCAGTTTTCAT+TGG - chr1_4:56686788-56686807 None:intergenic 45.0%
!!! GAAAACTGACCCGTTGGTTT+TGG + chr1_4:56686790-56686809 Msa0171850:intron 45.0%
TTCAGCTCATTATGTCTCGG+AGG + chr1_4:56687028-56687047 Msa0171850:intron 45.0%
TTTAGACAAGGTCAGCTTCC+TGG + chr1_4:56687074-56687093 Msa0171850:intron 45.0%
TTAGACAAGGTCAGCTTCCT+GGG + chr1_4:56687075-56687094 Msa0171850:intron 45.0%
TAATGAGGAAGGAGAGGGAA+CGG - chr1_4:56687600-56687619 None:intergenic 45.0%
TTCCCTCTCCTTCCTCATTA+CGG + chr1_4:56687600-56687619 Msa0171850:intron 45.0%
TGATGGCAAAAAGGACTCGA+GGG - chr1_4:56687715-56687734 None:intergenic 45.0%
! TTGATGGCAAAAAGGACTCG+AGG - chr1_4:56687716-56687735 None:intergenic 45.0%
!! GTCAGGTGTTGATGGCAAAA+AGG - chr1_4:56687724-56687743 None:intergenic 45.0%
GACTTCTATAGGTAGAACGG+AGG - chr1_4:56687795-56687814 None:intergenic 45.0%
GACAAGACTTTCTAGATGGC+GGG + chr1_4:56687843-56687862 Msa0171850:intron 45.0%
TGACAAAACTTCAGACACCC+AGG - chr1_4:56687879-56687898 None:intergenic 45.0%
GGCAGGTCAATATTTCCCTA+TGG + chr1_4:56688037-56688056 Msa0171850:intron 45.0%
CATCTTAAACCGAGGCCATA+GGG - chr1_4:56688055-56688074 None:intergenic 45.0%
CCCCAAACTCAGAGTTTAAG+TGG - chr1_4:56688194-56688213 None:intergenic 45.0%
GAAGGTAAGAATCTGCAAGC+TGG + chr1_4:56688430-56688449 Msa0171850:intron 45.0%
TTGGAGAAGTTCTTCCTGCA+AGG - chr1_4:56689215-56689234 None:intergenic 45.0%
GGTTTATCAGGACTCGATGT+TGG - chr1_4:56689407-56689426 None:intergenic 45.0%
ACCTATAACTGTTGCGGAAG+TGG + chr1_4:56689424-56689443 Msa0171850:CDS 45.0%
TCCACTTCCGCAACAGTTAT+AGG - chr1_4:56689428-56689447 None:intergenic 45.0%
CTTGCAAAATCCTTCACCAG+TGG - chr1_4:56689452-56689471 None:intergenic 45.0%
! GGATTTTGCAAGTAGGTGGA+AGG + chr1_4:56689460-56689479 Msa0171850:CDS 45.0%
! TTTTGCAAGTAGGTGGAAGG+CGG + chr1_4:56689463-56689482 Msa0171850:CDS 45.0%
GACTCTCTGATTCCATCAAG+AGG + chr1_4:56689591-56689610 Msa0171850:CDS 45.0%
!! AAAAAAAAAAAAAAATTCAT+TGG + chr1_4:56680493-56680512 Msa0171850:intron 5.0%
TGGACTTCAACAGGAGCTTG+AGG + chr1_4:56680056-56680075 Msa0171850:CDS 50.0%
!! TTAACCCACTTGGGTTGACC+TGG + chr1_4:56680408-56680427 Msa0171850:intron 50.0%
GAGTGTGCTTCTACTCAAGG+TGG + chr1_4:56680452-56680471 Msa0171850:intron 50.0%
CTTAATTCGCTGGGTAGCAG+GGG - chr1_4:56682111-56682130 None:intergenic 50.0%
ATAGGTGGCTGAATCCAAGC+TGG + chr1_4:56682193-56682212 Msa0171850:intron 50.0%
! GGACATCCTTGTTGATGGAG+AGG + chr1_4:56682256-56682275 Msa0171850:CDS 50.0%
!! GTCCGGCATTGACTAGAGAT+AGG + chr1_4:56682394-56682413 Msa0171850:intron 50.0%
GCCCTATCTCTAGTCAATGC+CGG - chr1_4:56682399-56682418 None:intergenic 50.0%
TGTTTCAAAGCCTGGACAGC+TGG - chr1_4:56682540-56682559 None:intergenic 50.0%
!! GCTGTCCAGGCTTTGAAACA+AGG + chr1_4:56682540-56682559 Msa0171850:intron 50.0%
! CAGACCCTTGTTTCAAAGCC+TGG - chr1_4:56682548-56682567 None:intergenic 50.0%
!! TGCCTGAGCTTTTCAAGCTC+AGG - chr1_4:56683181-56683200 None:intergenic 50.0%
CAGGCAGAAAGCAGTCTCAA+AGG + chr1_4:56683195-56683214 Msa0171850:CDS 50.0%
GACAACATGCCCATGTTTGC+TGG + chr1_4:56683555-56683574 Msa0171850:intron 50.0%
GTGCATGTCAGATCCTTCAC+TGG - chr1_4:56683866-56683885 None:intergenic 50.0%
TATGTATGAGCTGAGTGGGC+TGG + chr1_4:56684561-56684580 Msa0171850:intron 50.0%
! ATGTATGAGCTGAGTGGGCT+GGG + chr1_4:56684562-56684581 Msa0171850:intron 50.0%
GACTCCTCGGTCAATTCAGA+TGG - chr1_4:56684988-56685007 None:intergenic 50.0%
AACCAGCAACAGATCCCTAG+GGG - chr1_4:56685132-56685151 None:intergenic 50.0%
! GAGCTGGCTTCAGCTATATG+AGG - chr1_4:56685617-56685636 None:intergenic 50.0%
GAGCTTGCAGAAGCTGCTTA+TGG + chr1_4:56685667-56685686 Msa0171850:CDS 50.0%
!! GAGTACACTCCAGCTTGCTA+TGG + chr1_4:56685704-56685723 Msa0171850:intron 50.0%
AGTGCCCTTAAGTGCCCTAA+GGG + chr1_4:56686339-56686358 Msa0171850:intron 50.0%
! AGTGCCCTTAGGGCACTTAA+GGG - chr1_4:56686346-56686365 None:intergenic 50.0%
CTTGCTAACGAGTGCCCTTA+GGG - chr1_4:56686356-56686375 None:intergenic 50.0%
TCTTGCTAACGAGTGCCCTT+AGG - chr1_4:56686357-56686376 None:intergenic 50.0%
AGGCCGCAATAGCATCAATG+TGG - chr1_4:56686679-56686698 None:intergenic 50.0%
AGCTCATTATGTCTCGGAGG+CGG + chr1_4:56687031-56687050 Msa0171850:intron 50.0%
TTAAGCAGAACGCATTGCCC+AGG - chr1_4:56687095-56687114 None:intergenic 50.0%
TTCTTCACCTAGCTCCTAGC+TGG - chr1_4:56687449-56687468 None:intergenic 50.0%
! GATTAGCTCCGTATAGCTGC+AGG + chr1_4:56687532-56687551 Msa0171850:intron 50.0%
! TTTGGGGTCCTGCAGCTATA+CGG - chr1_4:56687543-56687562 None:intergenic 50.0%
TCCCTCTCCTTCCTCATTAC+GGG + chr1_4:56687601-56687620 Msa0171850:intron 50.0%
ACCCGTAATGAGGAAGGAGA+GGG - chr1_4:56687605-56687624 None:intergenic 50.0%
AACCCGTAATGAGGAAGGAG+AGG - chr1_4:56687606-56687625 None:intergenic 50.0%
CCATCTTAAACCGAGGCCAT+AGG - chr1_4:56688056-56688075 None:intergenic 50.0%
CCTATGGCCTCGGTTTAAGA+TGG + chr1_4:56688053-56688072 Msa0171850:CDS 50.0%
TTGCTCGCATGCTTGATTCC+AGG + chr1_4:56688601-56688620 Msa0171850:intron 50.0%
CATGCTTGATTCCAGGAAGC+AGG + chr1_4:56688608-56688627 Msa0171850:intron 50.0%
GATTCCATCAAGAGGATCCC+TGG + chr1_4:56689599-56689618 Msa0171850:CDS 50.0%
TGTTCAATGCAGACCCACCA+GGG - chr1_4:56689619-56689638 None:intergenic 50.0%
TTGTTCAATGCAGACCCACC+AGG - chr1_4:56689620-56689639 None:intergenic 50.0%
! TGGTGGGTCTGCATTGAACA+AGG + chr1_4:56689619-56689638 Msa0171850:CDS 50.0%
ACCACCAGGTCAACCCAAGT+GGG - chr1_4:56680415-56680434 None:intergenic 55.0%
!! TTGGGTTGACCTGGTGGTGT+TGG + chr1_4:56680417-56680436 Msa0171850:intron 55.0%
!! TTGACCTGGTGGTGTTGGCT+TGG + chr1_4:56680422-56680441 Msa0171850:intron 55.0%
!! TGACCTGGTGGTGTTGGCTT+GGG + chr1_4:56680423-56680442 Msa0171850:intron 55.0%
GGATGTCCACCATTCTCGGA+GGG - chr1_4:56682244-56682263 None:intergenic 55.0%
AGGATGTCCACCATTCTCGG+AGG - chr1_4:56682245-56682264 None:intergenic 55.0%
!! TTGCAGTGCCGGTGTTGAGA+AGG + chr1_4:56682646-56682665 Msa0171850:intron 55.0%
GCTGCAGACCTTCTCAACAC+CGG - chr1_4:56682657-56682676 None:intergenic 55.0%
GAGTGCCCTTAAGTGCCCTA+AGG + chr1_4:56686338-56686357 Msa0171850:intron 55.0%
! GAGTGCCCTTAGGGCACTTA+AGG - chr1_4:56686347-56686366 None:intergenic 55.0%
GCTAGCTGCTCCCAATCTTG+AGG - chr1_4:56687397-56687416 None:intergenic 55.0%
CTAGCTCCTAGCTGGTTGCA+GGG - chr1_4:56687441-56687460 None:intergenic 55.0%
!! TCTAGATGGCGGGACTCTCT+TGG + chr1_4:56687853-56687872 Msa0171850:intron 55.0%
CTCTGAGTTTGGGGATGGTC+AGG + chr1_4:56688200-56688219 Msa0171850:CDS 55.0%
TGCTGTCGGTCCTGATCTGA+AGG + chr1_4:56688924-56688943 Msa0171850:intron 55.0%
TCCATCAAGAGGATCCCTGG+TGG + chr1_4:56689602-56689621 Msa0171850:CDS 55.0%
CCATCAAGAGGATCCCTGGT+GGG + chr1_4:56689603-56689622 Msa0171850:CDS 55.0%
GCTGGAATGCCATGCACAAC+AGG - chr1_4:56689997-56690016 None:intergenic 55.0%
!! ACCCACTTGGGTTGACCTGG+TGG + chr1_4:56680411-56680430 Msa0171850:intron 60.0%
CACCACCAGGTCAACCCAAG+TGG - chr1_4:56680416-56680435 None:intergenic 60.0%
!! GTGGTGTTGGCTTGGGACCT+TGG + chr1_4:56680430-56680449 Msa0171850:intron 60.0%
AGCAACAGATCCCTAGGGGC+AGG - chr1_4:56685128-56685147 None:intergenic 60.0%
TGCCCCTAGGGATCTGTTGC+TGG + chr1_4:56685127-56685146 Msa0171850:intron 60.0%
! TCGGAGGCGGATTCCATGCT+TGG + chr1_4:56687044-56687063 Msa0171850:CDS 60.0%
TCTCGACCCTGCAACCAGCT+AGG + chr1_4:56687432-56687451 Msa0171850:intron 60.0%
CCTAGCTCCTAGCTGGTTGC+AGG - chr1_4:56687442-56687461 None:intergenic 60.0%
CCTGCAACCAGCTAGGAGCT+AGG + chr1_4:56687439-56687458 Msa0171850:intron 60.0%
CAGCTTCAGGACCTGCTTCC+TGG - chr1_4:56688622-56688641 None:intergenic 60.0%
CAGGAAGCAGGTCCTGAAGC+TGG + chr1_4:56688620-56688639 Msa0171850:intron 60.0%
TGTTGCGGAAGTGGAGCCAC+TGG + chr1_4:56689433-56689452 Msa0171850:CDS 60.0%
GGAAGTGGAGCCACTGGTGA+AGG + chr1_4:56689439-56689458 Msa0171850:CDS 60.0%
CCCACCAGGGATCCTCTTGA+TGG - chr1_4:56689606-56689625 None:intergenic 60.0%
GGTCCCAAGCCAACACCACC+AGG - chr1_4:56680429-56680448 None:intergenic 65.0%
! ATGGCGGGACTCTCTTGGCC+TGG + chr1_4:56687858-56687877 Msa0171850:intron 65.0%
TGGCGGGACTCTCTTGGCCT+GGG + chr1_4:56687859-56687878 Msa0171850:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 56679546 56690111 56679546 ID=Msa0171850;Name=Msa0171850
chr1_4 mRNA 56679546 56690111 56679546 ID=Msa0171850-mRNA-1;Parent=Msa0171850;Name=Msa0171850-mRNA-1;_AED=0.07;_eAED=0.07;_QI=174|1|1|1|1|1|20|411|699
chr1_4 exon 56679546 56679746 56679546 ID=Msa0171850-mRNA-1:exon:17189;Parent=Msa0171850-mRNA-1
chr1_4 exon 56679855 56679922 56679855 ID=Msa0171850-mRNA-1:exon:17190;Parent=Msa0171850-mRNA-1
chr1_4 exon 56680038 56680095 56680038 ID=Msa0171850-mRNA-1:exon:17191;Parent=Msa0171850-mRNA-1
chr1_4 exon 56680988 56681083 56680988 ID=Msa0171850-mRNA-1:exon:17192;Parent=Msa0171850-mRNA-1
chr1_4 exon 56681273 56681374 56681273 ID=Msa0171850-mRNA-1:exon:17193;Parent=Msa0171850-mRNA-1
chr1_4 exon 56681817 56681900 56681817 ID=Msa0171850-mRNA-1:exon:17194;Parent=Msa0171850-mRNA-1
chr1_4 exon 56682197 56682277 56682197 ID=Msa0171850-mRNA-1:exon:17195;Parent=Msa0171850-mRNA-1
chr1_4 exon 56683073 56683216 56683073 ID=Msa0171850-mRNA-1:exon:17196;Parent=Msa0171850-mRNA-1
chr1_4 exon 56683355 56683446 56683355 ID=Msa0171850-mRNA-1:exon:17197;Parent=Msa0171850-mRNA-1
chr1_4 exon 56683995 56684076 56683995 ID=Msa0171850-mRNA-1:exon:17198;Parent=Msa0171850-mRNA-1
chr1_4 exon 56684739 56684924 56684739 ID=Msa0171850-mRNA-1:exon:17199;Parent=Msa0171850-mRNA-1
chr1_4 exon 56685590 56685705 56685590 ID=Msa0171850-mRNA-1:exon:17200;Parent=Msa0171850-mRNA-1
chr1_4 exon 56685810 56685868 56685810 ID=Msa0171850-mRNA-1:exon:17201;Parent=Msa0171850-mRNA-1
chr1_4 exon 56686510 56686610 56686510 ID=Msa0171850-mRNA-1:exon:17202;Parent=Msa0171850-mRNA-1
chr1_4 exon 56687033 56687083 56687033 ID=Msa0171850-mRNA-1:exon:17203;Parent=Msa0171850-mRNA-1
chr1_4 exon 56688042 56688221 56688042 ID=Msa0171850-mRNA-1:exon:17204;Parent=Msa0171850-mRNA-1
chr1_4 exon 56688299 56688433 56688299 ID=Msa0171850-mRNA-1:exon:17205;Parent=Msa0171850-mRNA-1
chr1_4 exon 56688623 56688697 56688623 ID=Msa0171850-mRNA-1:exon:17206;Parent=Msa0171850-mRNA-1
chr1_4 exon 56689220 56689277 56689220 ID=Msa0171850-mRNA-1:exon:17207;Parent=Msa0171850-mRNA-1
chr1_4 exon 56689396 56690111 56689396 ID=Msa0171850-mRNA-1:exon:17208;Parent=Msa0171850-mRNA-1
chr1_4 five_prime_UTR 56679546 56679719 56679546 ID=Msa0171850-mRNA-1:five_prime_utr;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56679720 56679746 56679720 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56679855 56679922 56679855 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56680038 56680095 56680038 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56680988 56681083 56680988 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56681273 56681374 56681273 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56681817 56681900 56681817 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56682197 56682277 56682197 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56683073 56683216 56683073 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56683355 56683446 56683355 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56683995 56684076 56683995 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56684739 56684924 56684739 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56685590 56685705 56685590 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56685810 56685868 56685810 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56686510 56686610 56686510 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56687033 56687083 56687033 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56688042 56688221 56688042 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56688299 56688433 56688299 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56688623 56688697 56688623 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56689220 56689277 56689220 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 CDS 56689396 56689700 56689396 ID=Msa0171850-mRNA-1:cds;Parent=Msa0171850-mRNA-1
chr1_4 three_prime_UTR 56689701 56690111 56689701 ID=Msa0171850-mRNA-1:three_prime_utr;Parent=Msa0171850-mRNA-1
Gene Sequence

>Msa0171850

ATGGCTGATGTCGCCTCAAACACAATGAGTCCTTCTAGTGCATTTGATCTAGGAGCATTCGTTGGTGATTTAACCATTGAAGAAGATCTTAACGGTGATGATATATCGTTAGATGGACTTCAACAGGAGCTTGAGGAATGTAAGAATGATGAAGTTGTTGCAAATATACTATCTAAAGGTCCAAAACTTAGAGATTATACTAAGGGAGTTGAGAATGATTTGCGCAAAGTGGAGTTGGATTCAATTCAGGATTATATTAAAGAGAGTGATAATCTAGTCTCTCTTCATGACCAAATTCATGATTGTGATAATATCTTGTCACATATGGAAACTCTGCTAAGTGGATTTCAGGCTGAGATTGGTTCCATAAGTTCAGACATTAAAATTCTGCAAGAGAAGTCTATGGATATGGGTTTGAGGCTTAAGAATCGCAAGGTGGCTGAATCCAAGCTGGCTAAGTTTGTGGAAGACATTATTATCCCTCCGAGAATGGTGGACATCCTTGTTGATGGAGAGGTCAATGAGGAATACATGAGAACTCTTGAGATTCTAAGTAAGAAACTGAAGTTTGTAGAAGTGGACACAATGGTTAAAGCTTCAAAAGCTCTAAAAGATGTTCAACCTGAGCTTGAAAAGCTCAGGCAGAAAGCAGTCTCAAAGGTATTTGACTTCATTGTTCAGAAACTATATGCATTGAGAAAACCCAAAACAAATATCCAAATACTTCAACAAAGTGTCCTTTTAAAGTACAAGTATGTTGTTAACTTTCTCAAGGAACATGGCAAAGAAGTATATAATGAAGTTCGTGCAGCTTATATTGATACAATGAACAAGGTTCTTAGTGCTCATTTCCGTGCTTACATACAAGCATTGGAGAAACTGCAATTGGATATAGCAACATCCTATGATTTAATTGGTGTAGAGACAAGAAGCAACAGCGGTCTTTTTGCAACAGCATGGCAACCGCTAAAGAATCGATCTGCTGTTTTTGCTCTTGGGGATAGGATTAATATATTGAAGGAAATTGATGAACCGGCATTGATTCCTCATATAGCTGAAGCCAGCTCTATTAAATATCCATATGAAGTTCTGTTCAGGAGCTTGCAGAAGCTGCTTATGGATACTGCTACTTCAGAATATAATTTCTGTGAGGATTTTTATGGGGAACAACATATGTTCTATGAAATTTTTTCAGGTCCTTTTGGTGTCATGGATGAGCATTTCAGTACAATACTTCCAAACTGCTATGATGCTATAGGTCTAATGCTTATGATTCGCATAATACACCAGCATCAGCTCATTATGTCTCGGAGGCGGATTCCATGCTTGGATTCTTATTTAGACAAGGTCAATATTTCCCTATGGCCTCGGTTTAAGATGGTATTCGACATGCACCTCAACAGTTTGCGAAATGCAAATGTGAAGACATTGTGGGAAGATGATGTTCATCCTCATTATGTCATGAGGCGTTATGCGGAGTTTACTGCTTCACTTATCCACTTAAACTCTGAGTTTGGGGATGGTCAGCTTGAACTGAATCTGGAACGACTTAGAATGGCCATTGATGATTTACTTATCAAGCTTGCCAAGAACTTCACAAAGCCAAAACTACAAACGGTGTTTCTTATAAACAATTATGATATGACAATCGCTGTTTTGAAGGAAGCAGGTCCTGAAGCTGGCAAAATTCAAATGCACTTTGAGGAACTACTGAAGAGCAATACAGCATTATTTGTGGAAGAACTTCTCCAAGAGCATTTTAATGATTTAATCAAGTTTGTCAAGGCCAAAGCCTCTGAGGACCCAACATCGAGTCCTGATAAACCTATAACTGTTGCGGAAGTGGAGCCACTGGTGAAGGATTTTGCAAGTAGGTGGAAGGCGGCAATAGAGTTGATGCACAAAGATGTCATCACATCTTTCAGCAATTTTTTGTGCGGTATGGAGATCTTAAGAGCTGCATTGACCCAATTGCTACTTTACTATACGAGACTCTCTGATTCCATCAAGAGGATCCCTGGTGGGTCTGCATTGAACAAGGATCTTGTTTCCATATCTTCAATCATGTATGAGATTAGGAAATATTCGAGGACTTTCTAA

Protein sequence

>Msa0171850

MADVASNTMSPSSAFDLGAFVGDLTIEEDLNGDDISLDGLQQELEECKNDEVVANILSKGPKLRDYTKGVENDLRKVELDSIQDYIKESDNLVSLHDQIHDCDNILSHMETLLSGFQAEIGSISSDIKILQEKSMDMGLRLKNRKVAESKLAKFVEDIIIPPRMVDILVDGEVNEEYMRTLEILSKKLKFVEVDTMVKASKALKDVQPELEKLRQKAVSKVFDFIVQKLYALRKPKTNIQILQQSVLLKYKYVVNFLKEHGKEVYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSYDLIGVETRSNSGLFATAWQPLKNRSAVFALGDRINILKEIDEPALIPHIAEASSIKYPYEVLFRSLQKLLMDTATSEYNFCEDFYGEQHMFYEIFSGPFGVMDEHFSTILPNCYDAIGLMLMIRIIHQHQLIMSRRRIPCLDSYLDKVNISLWPRFKMVFDMHLNSLRNANVKTLWEDDVHPHYVMRRYAEFTASLIHLNSEFGDGQLELNLERLRMAIDDLLIKLAKNFTKPKLQTVFLINNYDMTIAVLKEAGPEAGKIQMHFEELLKSNTALFVEELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEIRKYSRTF*