Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423330 | sp|Q3SZL5|PIGS_BOVIN | 26.620 | 571 | 354 | 18 | 50 | 597 | 25 | 553 | 2.15e-37 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423330 | A0A072TZI8 | 94.000 | 600 | 26 | 2 | 1 | 600 | 1 | 590 | 0.0 | 1164 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1423330 | Msa1445570 | 0.804570 | 2.027441e-49 | -8.615850e-47 |
| Msa1131740 | Msa1423330 | 0.825503 | 4.523017e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423330 | MtrunA17_Chr7g0235571 | 94.000 | 600 | 26 | 2 | 1 | 600 | 1 | 590 | 0.0 | 1164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423330 | AT3G07180.1 | 60.768 | 599 | 197 | 9 | 27 | 599 | 13 | 599 | 0.0 | 695 |
| Msa1423330 | AT3G07180.3 | 59.766 | 599 | 195 | 10 | 27 | 599 | 13 | 591 | 0.0 | 675 |
| Msa1423330 | AT3G07180.2 | 56.160 | 349 | 126 | 7 | 27 | 349 | 13 | 360 | 4.21e-122 | 369 |
| Msa1423330 | AT3G07180.2 | 68.041 | 97 | 31 | 0 | 503 | 599 | 358 | 454 | 1.99e-33 | 133 |
Find 175 sgRNAs with CRISPR-Local
Find 1030 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTCATTTCTTTCGTTCT+AGG | 0.130408 | tig0025528:-42306 | Msa1423330:CDS |
| TATAGTGTTGTGGTGGTAAA+TGG | 0.185656 | tig0025528:-41820 | Msa1423330:CDS |
| CAAATCCTTTATACAGCTTT+GGG | 0.223453 | tig0025528:+39289 | None:intergenic |
| TGATCTTATTGTAGGGATTT+TGG | 0.238739 | tig0025528:-41005 | Msa1423330:intron |
| CCAAATCCTTTATACAGCTT+TGG | 0.289879 | tig0025528:+39288 | None:intergenic |
| TTGAATCGGTTATCGGAGTT+TGG | 0.290757 | tig0025528:+42400 | None:intergenic |
| ATGATTATAATGGATGAAAT+TGG | 0.297476 | tig0025528:-36648 | Msa1423330:CDS |
| GAAGTCAATGCTGTTGATTT+TGG | 0.301472 | tig0025528:-41922 | Msa1423330:CDS |
| CCAAAGCTGTATAAAGGATT+TGG | 0.306450 | tig0025528:-39288 | Msa1423330:CDS |
| ATAAAATTAGAAATGGCATT+TGG | 0.318636 | tig0025528:+35120 | None:intergenic |
| GTGGATTGTTGGGAAGGTTT+CGG | 0.320075 | tig0025528:-41755 | Msa1423330:CDS |
| AATGGATGAAATTGGAAAAC+AGG | 0.337157 | tig0025528:-36640 | Msa1423330:intron |
| CGATGAAGAGGCGGATGAAT+TGG | 0.338228 | tig0025528:-41881 | Msa1423330:CDS |
| TGAATCGGTTATCGGAGTTT+GGG | 0.346873 | tig0025528:+42401 | None:intergenic |
| AAAGATACAAGCAAGAAAAT+AGG | 0.352639 | tig0025528:-35253 | Msa1423330:CDS |
| GGGCAGTTACGGCAACTTCT+TGG | 0.359643 | tig0025528:-38880 | Msa1423330:CDS |
| CAAGGGATTGGGTTTATGAT+TGG | 0.364134 | tig0025528:-41585 | Msa1423330:intron |
| ATTACCAAGGATGATTATAA+TGG | 0.365327 | tig0025528:-36658 | Msa1423330:CDS |
| GACCTTTATGTTGGTGAGTC+TGG | 0.368121 | tig0025528:-38844 | Msa1423330:CDS |
| TTTGAAGTTGAATCGGTTAT+CGG | 0.368419 | tig0025528:+42393 | None:intergenic |
| TAAAATTAGAAATGGCATTT+GGG | 0.368826 | tig0025528:+35121 | None:intergenic |
| GCTTGGATCTCTTTCTAGAT+TGG | 0.374672 | tig0025528:-36776 | Msa1423330:intron |
| GGGCTTCTAATAATGAACTA+AGG | 0.383129 | tig0025528:-42140 | Msa1423330:CDS |
| GGATGCAAAGCCTCAATAAC+AGG | 0.383148 | tig0025528:+40957 | None:intergenic |
| ACAGGTTGAAGCTAGTTTCC+AGG | 0.386519 | tig0025528:-35172 | Msa1423330:three_prime_UTR |
| CTTTCATGTGCCACAACGCT+TGG | 0.397509 | tig0025528:-36793 | Msa1423330:CDS |
| GTAGTGCTGACACGGTCCTT+AGG | 0.401407 | tig0025528:-35086 | Msa1423330:three_prime_UTR |
| ATTCGCAATGCGGTTGCAAT+GGG | 0.402020 | tig0025528:-42077 | Msa1423330:CDS |
| AAGAATATGGTGAATGTGTA+TGG | 0.402517 | tig0025528:-41856 | Msa1423330:CDS |
| TAATGCTGACCCAAGGGATT+GGG | 0.406220 | tig0025528:-41596 | Msa1423330:CDS |
| TTGAAGGTCAGAGAAATAAC+TGG | 0.412201 | tig0025528:+39425 | None:intergenic |
| CAGACATATGATTTCTCCTC+AGG | 0.412813 | tig0025528:-39249 | Msa1423330:intron |
| TACAGGCATGGGTGGATTGT+TGG | 0.417154 | tig0025528:-41766 | Msa1423330:CDS |
| GCTGACTGTGTGTAGGGAAT+TGG | 0.420206 | tig0025528:-36851 | Msa1423330:intron |
| TTTGGTAAGGTGTTTGTGAA+TGG | 0.424019 | tig0025528:-41700 | Msa1423330:CDS |
| ATTCTCTTATCGCAGCTAGA+AGG | 0.425827 | tig0025528:+35279 | None:intergenic |
| GACATTGATGCGGCGGCTCT+TGG | 0.429053 | tig0025528:-35040 | Msa1423330:three_prime_UTR |
| TATAAAGGATTTGGAAAGTA+AGG | 0.431090 | tig0025528:-39279 | Msa1423330:CDS |
| AAGTTCTCATGGGGCAGTTA+CGG | 0.431363 | tig0025528:-38891 | Msa1423330:CDS |
| ACAGGCATGGGTGGATTGTT+GGG | 0.432435 | tig0025528:-41765 | Msa1423330:CDS |
| AGAAGGATATGCATTGTAAC+TGG | 0.441608 | tig0025528:+35296 | None:intergenic |
| TTTATGCCGGTTGGTTCTGA+TGG | 0.442700 | tig0025528:-41646 | Msa1423330:CDS |
| GTGAATGGTGGGAGTGAAGA+TGG | 0.444296 | tig0025528:-41685 | Msa1423330:CDS |
| TCAACAGTGACATCGGCTAT+AGG | 0.447116 | tig0025528:+40936 | None:intergenic |
| ATAGTGTTGTGGTGGTAAAT+GGG | 0.447632 | tig0025528:-41819 | Msa1423330:CDS |
| GGATGAATTGGTGAAGAATA+TGG | 0.450781 | tig0025528:-41869 | Msa1423330:CDS |
| GAAGAGGTGAAGGCTGTGGT+TGG | 0.451712 | tig0025528:-41793 | Msa1423330:CDS |
| TAGTGCTGACACGGTCCTTA+GGG | 0.455119 | tig0025528:-35085 | Msa1423330:three_prime_UTR |
| TCATCCATTATAATCATCCT+TGG | 0.457874 | tig0025528:+36654 | None:intergenic |
| ATGAACTAAGGGATTCAATT+CGG | 0.460412 | tig0025528:-42128 | Msa1423330:CDS |
| TAGGAAGTACTTGGCTTGGA+AGG | 0.460900 | tig0025528:-35234 | Msa1423330:CDS |
| CTCCATTCGCAAGCTCTAGT+TGG | 0.461662 | tig0025528:+39477 | None:intergenic |
| GGTAAGGTGTTTGTGAATGG+TGG | 0.461816 | tig0025528:-41697 | Msa1423330:CDS |
| AAATTTACACGGAAAGAGTA+AGG | 0.466437 | tig0025528:+42191 | None:intergenic |
| CGGAGTGAGTTTATGCCGGT+TGG | 0.469904 | tig0025528:-41655 | Msa1423330:CDS |
| GGATTCGATGTTGGAGGAGA+AGG | 0.474593 | tig0025528:+42218 | None:intergenic |
| CGATGTCACTGTTGAAAGCC+AGG | 0.476162 | tig0025528:-40928 | Msa1423330:intron |
| AAGAGGTGAAGGCTGTGGTT+GGG | 0.479480 | tig0025528:-41792 | Msa1423330:CDS |
| AAATTTCGTGCTATCTTCAT+CGG | 0.483311 | tig0025528:-42174 | Msa1423330:CDS |
| AGGTGCACGGTAGATTTCAA+TGG | 0.484784 | tig0025528:+42263 | None:intergenic |
| CAATCATAAACCCAATCCCT+TGG | 0.486930 | tig0025528:+41586 | None:intergenic |
| TTCTAGCTGCGATAAGAGAA+TGG | 0.489632 | tig0025528:-35277 | Msa1423330:CDS |
| GGTGGTAAATGGGGAGGAAG+AGG | 0.491032 | tig0025528:-41809 | Msa1423330:CDS |
| AAAATAGGAAGTACTTGGCT+TGG | 0.491213 | tig0025528:-35238 | Msa1423330:CDS |
| GGAGAGATCTCTAAGACTAA+TGG | 0.491895 | tig0025528:-39458 | Msa1423330:CDS |
| CTCACAAGACCTCGACTACC+TGG | 0.492055 | tig0025528:+35154 | None:intergenic |
| GCTCAAAATAATGCAACTGT+TGG | 0.492447 | tig0025528:-36091 | Msa1423330:CDS |
| TTAATGCTGACCCAAGGGAT+TGG | 0.493164 | tig0025528:-41597 | Msa1423330:CDS |
| TGTGGGGAGGTGTTGTGGTA+TGG | 0.493358 | tig0025528:-39316 | Msa1423330:CDS |
| TCTTTCGCTCCCTAGGAGAA+TGG | 0.497516 | tig0025528:+38816 | None:intergenic |
| TGAAACCTCTTTCGCTCCCT+AGG | 0.497597 | tig0025528:+38809 | None:intergenic |
| TCTGGCACATCCATTCTCCT+AGG | 0.497958 | tig0025528:-38826 | Msa1423330:CDS |
| AGGCTGTGGTTGGGAAGTAC+AGG | 0.498454 | tig0025528:-41783 | Msa1423330:CDS |
| CAGGAAGAAAATGAAGACTT+TGG | 0.498770 | tig0025528:+40807 | None:intergenic |
| AATTATCGATCAACAGTGAC+AGG | 0.499321 | tig0025528:-35190 | Msa1423330:three_prime_UTR |
| TGCCAGACTCACCAACATAA+AGG | 0.499380 | tig0025528:+38842 | None:intergenic |
| GATTCGCAATGCGGTTGCAA+TGG | 0.500467 | tig0025528:-42078 | Msa1423330:CDS |
| GATACTTCAGTTGCAGCTGG+TGG | 0.501022 | tig0025528:-40327 | Msa1423330:CDS |
| AAATGGGGAGGAAGAGGTGA+AGG | 0.504258 | tig0025528:-41803 | Msa1423330:CDS |
| AAGGATTCGATGCGGTCGAA+AGG | 0.506734 | tig0025528:+42237 | None:intergenic |
| GCGAAAGAGGTTTCACAGAA+TGG | 0.508016 | tig0025528:-38801 | Msa1423330:intron |
| TTAGATACTTCAGTTGCAGC+TGG | 0.514652 | tig0025528:-40330 | Msa1423330:CDS |
| GCAGATGTGGGGAGGTGTTG+TGG | 0.516431 | tig0025528:-39321 | Msa1423330:intron |
| TCAATGGATTTCCAGAGAAG+AGG | 0.520889 | tig0025528:+42279 | None:intergenic |
| TGCCGGTTGGTTCTGATGGG+AGG | 0.522091 | tig0025528:-41642 | Msa1423330:CDS |
| CATTGTTACGAGCAAATTGA+GGG | 0.522170 | tig0025528:-34966 | Msa1423330:three_prime_UTR |
| TTATGCCGGTTGGTTCTGAT+GGG | 0.523477 | tig0025528:-41645 | Msa1423330:CDS |
| GTAAGGTGTTTGTGAATGGT+GGG | 0.525491 | tig0025528:-41696 | Msa1423330:CDS |
| ATGAAGAGACGTTTAACGCC+GGG | 0.528765 | tig0025528:+42339 | None:intergenic |
| GCATGGGTGGATTGTTGGGA+AGG | 0.528777 | tig0025528:-41761 | Msa1423330:CDS |
| ACAACCACCTTTCAAGTGAA+AGG | 0.529973 | tig0025528:+34991 | None:intergenic |
| GGAATGTATGATGCTTCTGC+TGG | 0.530664 | tig0025528:-36070 | Msa1423330:intron |
| TAGCTGATGGACATAATTGA+AGG | 0.531966 | tig0025528:+35892 | None:intergenic |
| GGCTTCTAATAATGAACTAA+GGG | 0.534042 | tig0025528:-42139 | Msa1423330:CDS |
| CTCAAATGAATAGTAGCTGA+TGG | 0.534091 | tig0025528:+35879 | None:intergenic |
| GAATCGGTTATCGGAGTTTG+GGG | 0.534823 | tig0025528:+42402 | None:intergenic |
| TTTCCCTTTCACTTGAAAGG+TGG | 0.536074 | tig0025528:-34995 | Msa1423330:three_prime_UTR |
| ATCCTCCCATCAGAACCAAC+CGG | 0.536929 | tig0025528:+41640 | None:intergenic |
| GCAAGAAAATAGGAAGTACT+TGG | 0.537006 | tig0025528:-35243 | Msa1423330:CDS |
| CAACCACCTTTCAAGTGAAA+GGG | 0.539645 | tig0025528:+34992 | None:intergenic |
| TTTGTTGAAACCTGTTATTG+AGG | 0.540648 | tig0025528:-40967 | Msa1423330:CDS |
| CAAGCGTTGTGGCACATGAA+AGG | 0.543032 | tig0025528:+36794 | None:intergenic |
| CCATTGTTACGAGCAAATTG+AGG | 0.548440 | tig0025528:-34967 | Msa1423330:three_prime_UTR |
| GGAGAAATCATATGTCTGAC+TGG | 0.549427 | tig0025528:+39254 | None:intergenic |
| AATCATAAACCCAATCCCTT+GGG | 0.550520 | tig0025528:+41587 | None:intergenic |
| GGGACTGGATTCGATGTTGG+AGG | 0.552116 | tig0025528:+42212 | None:intergenic |
| GGAGGAAGAGGTGAAGGCTG+TGG | 0.552968 | tig0025528:-41797 | Msa1423330:CDS |
| GATCTTGAGTACTGAATATG+TGG | 0.556061 | tig0025528:+40766 | None:intergenic |
| GTGGTTGGGAAGTACAGGCA+TGG | 0.557066 | tig0025528:-41778 | Msa1423330:CDS |
| TAAGGGACTGGATTCGATGT+TGG | 0.557622 | tig0025528:+42209 | None:intergenic |
| ACGATCACTTCACGCTTCCA+TGG | 0.559044 | tig0025528:-42475 | Msa1423330:exon |
| ATTCTCCTAGGGAGCGAAAG+AGG | 0.562499 | tig0025528:-38814 | Msa1423330:CDS |
| GTTTGCTTAATGCTGACCCA+AGG | 0.562968 | tig0025528:-41603 | Msa1423330:CDS |
| TCGATGCGGTCGAAAGGAAG+AGG | 0.563156 | tig0025528:+42243 | None:intergenic |
| GATTGTTGGGAAGGTTTCGG+AGG | 0.563294 | tig0025528:-41752 | Msa1423330:CDS |
| TGGTTGGGAAGTACAGGCAT+GGG | 0.563829 | tig0025528:-41777 | Msa1423330:CDS |
| GGAGTGAAGATGGTTCGATT+CGG | 0.565920 | tig0025528:-41675 | Msa1423330:CDS |
| ACAATAGAACATACAAAGAA+CGG | 0.567002 | tig0025528:+40741 | None:intergenic |
| AGAGAAGGTGTATAGTGTTG+TGG | 0.567287 | tig0025528:-41830 | Msa1423330:CDS |
| ATACTTCAGTTGCAGCTGGT+GGG | 0.567698 | tig0025528:-40326 | Msa1423330:CDS |
| ACACGGAAAGAGTAAGGGAC+TGG | 0.567958 | tig0025528:+42197 | None:intergenic |
| AAGTCAGATGACCTTTATGT+TGG | 0.569066 | tig0025528:-38853 | Msa1423330:CDS |
| AGAGGACACTCCTTTGCAGA+TGG | 0.569090 | tig0025528:+39500 | None:intergenic |
| TTGGGAAGTACAGGCATGGG+TGG | 0.571152 | tig0025528:-41774 | Msa1423330:CDS |
| AATCTCAGATTCACCACCAC+CGG | 0.575796 | tig0025528:-42448 | Msa1423330:CDS |
| TAGTGTTGTGGTGGTAAATG+GGG | 0.577283 | tig0025528:-41818 | Msa1423330:CDS |
| GATTCGGAGTGAGTTTATGC+CGG | 0.577521 | tig0025528:-41659 | Msa1423330:CDS |
| GTCAAAAGTATTGCAACTTG+TGG | 0.578476 | tig0025528:-40301 | Msa1423330:CDS |
| TGTCACTGTCATTCTAAACA+AGG | 0.581077 | tig0025528:+34845 | None:intergenic |
| CTCCAACTAGAGCTTGCGAA+TGG | 0.584338 | tig0025528:-39479 | Msa1423330:CDS |
| AGGAAGTACTTGGCTTGGAA+GGG | 0.584866 | tig0025528:-35233 | Msa1423330:CDS |
| AAATCCTTTATACAGCTTTG+GGG | 0.588176 | tig0025528:+39290 | None:intergenic |
| TTTGCTTAATGCTGACCCAA+GGG | 0.588784 | tig0025528:-41602 | Msa1423330:CDS |
| CAGATATATTCCATCTGCAA+AGG | 0.589184 | tig0025528:-39510 | Msa1423330:CDS |
| ACGTATACTAGTTGTCCCTA+AGG | 0.591985 | tig0025528:+35070 | None:intergenic |
| ACTCTGTGTCTGTCGTTGAA+AGG | 0.592026 | tig0025528:-42050 | Msa1423330:intron |
| AATCCTTTATACAGCTTTGG+GGG | 0.592811 | tig0025528:+39291 | None:intergenic |
| CTGGCACATCCATTCTCCTA+GGG | 0.593812 | tig0025528:-38825 | Msa1423330:CDS |
| CCTCAATTTGCTCGTAACAA+TGG | 0.601661 | tig0025528:+34967 | None:intergenic |
| TCTTCCTGGGATGACGAGCA+TGG | 0.604602 | tig0025528:-40792 | Msa1423330:CDS |
| AGCTAGTTTCCAGGTAGTCG+AGG | 0.606107 | tig0025528:-35163 | Msa1423330:three_prime_UTR |
| TGAATCTGAGATTTCCGCCA+TGG | 0.609618 | tig0025528:+42458 | None:intergenic |
| CTGGCTTTCAACAGTGACAT+CGG | 0.614755 | tig0025528:+40929 | None:intergenic |
| CTTCAGTTGCAGCTGGTGGG+AGG | 0.616847 | tig0025528:-40323 | Msa1423330:CDS |
| AAATGACAGTAGTGCTGACA+CGG | 0.617382 | tig0025528:-35094 | Msa1423330:three_prime_UTR |
| TTCGCAAGCTCTAGTTGGAG+AGG | 0.620379 | tig0025528:+39482 | None:intergenic |
| AACAGGTGAATTCTAATGAG+TGG | 0.622364 | tig0025528:-40356 | Msa1423330:intron |
| TGCAGGTACAATCATTACCA+AGG | 0.629331 | tig0025528:-36671 | Msa1423330:intron |
| ATTGAGGCGAAACGATGAAG+AGG | 0.631474 | tig0025528:-41893 | Msa1423330:CDS |
| AAGGCAATCAAGATCTCTTG+CGG | 0.631831 | tig0025528:-35932 | Msa1423330:CDS |
| AACCGCGGTGATTCGCAATG+CGG | 0.633088 | tig0025528:-42087 | Msa1423330:CDS |
| TGTTGTGGTGGTAAATGGGG+AGG | 0.633382 | tig0025528:-41815 | Msa1423330:CDS |
| AGAAAGAGATCCAAGCGTTG+TGG | 0.636450 | tig0025528:+36783 | None:intergenic |
| GGGAATTGGATGTCTTGTCA+AGG | 0.639791 | tig0025528:-36837 | Msa1423330:CDS |
| AATTTACACGGAAAGAGTAA+GGG | 0.640749 | tig0025528:+42192 | None:intergenic |
| ATACTATTGCAGATGTGGGG+AGG | 0.641438 | tig0025528:-39329 | Msa1423330:intron |
| ATGGAAGCGTGAAGTGATCG+TGG | 0.643567 | tig0025528:+42477 | None:intergenic |
| GGTCGAAAGGAAGAGGTGCA+CGG | 0.649156 | tig0025528:+42250 | None:intergenic |
| GCAACAAGACATTGATGCGG+CGG | 0.653634 | tig0025528:-35047 | Msa1423330:three_prime_UTR |
| GAAGGTGTATAGTGTTGTGG+TGG | 0.655000 | tig0025528:-41827 | Msa1423330:CDS |
| GAATGTGTATGGAGAAGAGA+AGG | 0.655024 | tig0025528:-41845 | Msa1423330:CDS |
| AAGATAGCACGAAATTTACA+CGG | 0.657796 | tig0025528:+42180 | None:intergenic |
| GAAGGTTTCGGAGGACGAAG+CGG | 0.661130 | tig0025528:-41743 | Msa1423330:CDS |
| GAGGCGAAACGATGAAGAGG+CGG | 0.662028 | tig0025528:-41890 | Msa1423330:CDS |
| GATGAAGAGACGTTTAACGC+CGG | 0.669895 | tig0025528:+42338 | None:intergenic |
| AATCGGTTATCGGAGTTTGG+GGG | 0.670109 | tig0025528:+42403 | None:intergenic |
| GCAATCAAGATCTCTTGCGG+AGG | 0.670297 | tig0025528:-35929 | Msa1423330:CDS |
| TCTATACTATTGCAGATGTG+GGG | 0.681956 | tig0025528:-39332 | Msa1423330:intron |
| TTCGCAATGCGGTTGCAATG+GGG | 0.684348 | tig0025528:-42076 | Msa1423330:CDS |
| ATCACTTCACGCTTCCATGG+CGG | 0.692187 | tig0025528:-42472 | Msa1423330:exon |
| AAAATGAAGACTTTGGTGTG+TGG | 0.709097 | tig0025528:+40814 | None:intergenic |
| AAAATGATTGAATTTAACCG+CGG | 0.716413 | tig0025528:-42102 | Msa1423330:CDS |
| AACCGCATTGCGAATCACCG+CGG | 0.718123 | tig0025528:+42085 | None:intergenic |
| CGTGCAACAAGACATTGATG+CGG | 0.753447 | tig0025528:-35050 | Msa1423330:three_prime_UTR |
| TGGAGGAGAAGGATTCGATG+CGG | 0.778409 | tig0025528:+42229 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTACTTATTTTTATTTTTTT+TGG | - | tig0025528:37954-37973 | Msa1423330:intron | 10.0% |
| !! | GATTTACTTTAAATAAATAA+TGG | - | tig0025528:38245-38264 | Msa1423330:intron | 10.0% |
| !!! | AATTATTATTTTTTAAACAC+AGG | - | tig0025528:39030-39049 | Msa1423330:intron | 10.0% |
| !! | AAGATATAAATATAACAATT+CGG | - | tig0025528:39294-39313 | Msa1423330:CDS | 10.0% |
| !! | TAATTAAAATATTCAATTAG+CGG | - | tig0025528:39489-39508 | Msa1423330:CDS | 10.0% |
| !!! | TTTTTTTTTTAAATGTTGTT+GGG | + | tig0025528:40124-40143 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTAAATGTTGT+TGG | + | tig0025528:40125-40144 | None:intergenic | 10.0% |
| !! | TTTATTGTTATGAATAATAT+AGG | + | tig0025528:40150-40169 | None:intergenic | 10.0% |
| !! | TCTAAAAAAAATTATTATGA+TGG | + | tig0025528:40967-40986 | None:intergenic | 10.0% |
| !!! | TTTTTTTATATCAATTAATC+AGG | + | tig0025528:41132-41151 | None:intergenic | 10.0% |
| !! | AAAATCTTATCAAAATAAAT+AGG | + | tig0025528:41692-41711 | None:intergenic | 10.0% |
| !! | ATTATTAAGTATTAATGAAT+TGG | - | tig0025528:41742-41761 | Msa1423330:CDS | 10.0% |
| !!! | ATTTTCAATAAAATTAGAAA+TGG | + | tig0025528:42239-42258 | None:intergenic | 10.0% |
| !!! | GTACTTATTTTTATTTTTTT+TGG | - | tig0025528:37954-37973 | Msa1423330:intron | 10.0% |
| !! | GATTTACTTTAAATAAATAA+TGG | - | tig0025528:38245-38264 | Msa1423330:intron | 10.0% |
| !!! | AATTATTATTTTTTAAACAC+AGG | - | tig0025528:39030-39049 | Msa1423330:intron | 10.0% |
| !! | AAGATATAAATATAACAATT+CGG | - | tig0025528:39294-39313 | Msa1423330:CDS | 10.0% |
| !! | TAATTAAAATATTCAATTAG+CGG | - | tig0025528:39489-39508 | Msa1423330:CDS | 10.0% |
| !!! | TTTTTTTTTTAAATGTTGTT+GGG | + | tig0025528:40124-40143 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTAAATGTTGT+TGG | + | tig0025528:40125-40144 | None:intergenic | 10.0% |
| !! | TTTATTGTTATGAATAATAT+AGG | + | tig0025528:40150-40169 | None:intergenic | 10.0% |
| !! | TCTAAAAAAAATTATTATGA+TGG | + | tig0025528:40967-40986 | None:intergenic | 10.0% |
| !!! | TTTTTTTATATCAATTAATC+AGG | + | tig0025528:41132-41151 | None:intergenic | 10.0% |
| !! | AAAATCTTATCAAAATAAAT+AGG | + | tig0025528:41692-41711 | None:intergenic | 10.0% |
| !! | ATTATTAAGTATTAATGAAT+TGG | - | tig0025528:41742-41761 | Msa1423330:CDS | 10.0% |
| !!! | ATTTTCAATAAAATTAGAAA+TGG | + | tig0025528:42239-42258 | None:intergenic | 10.0% |
| !!! | TTTGTTTTGTTTCTATTTTT+GGG | - | tig0025528:35823-35842 | Msa1423330:intron | 15.0% |
| !!! | TGTAATTGTAATTTGTAAAT+TGG | - | tig0025528:35883-35902 | Msa1423330:CDS | 15.0% |
| !!! | GTAATTGTAATTTGTAAATT+GGG | - | tig0025528:35884-35903 | Msa1423330:CDS | 15.0% |
| !!! | TAATTGTAATTTGTAAATTG+GGG | - | tig0025528:35885-35904 | Msa1423330:CDS | 15.0% |
| !! | ATAAGTATAACATAGTTAAA+AGG | + | tig0025528:37817-37836 | None:intergenic | 15.0% |
| !!! | TTTTACTTTTTCTCATTAAT+TGG | - | tig0025528:38123-38142 | Msa1423330:intron | 15.0% |
| !! | ATATGTGAGTATAAAAATAA+TGG | + | tig0025528:38651-38670 | None:intergenic | 15.0% |
| !! | TTGCTAAATATATATCTTTA+AGG | - | tig0025528:38682-38701 | Msa1423330:intron | 15.0% |
| !! | TGCTAAATATATATCTTTAA+GGG | - | tig0025528:38683-38702 | Msa1423330:intron | 15.0% |
| !!! | TATATTTTTTATATTCCACA+TGG | - | tig0025528:38732-38751 | Msa1423330:intron | 15.0% |
| !! | ATCCTATTCTATTATTATTT+AGG | + | tig0025528:38765-38784 | None:intergenic | 15.0% |
| !! | ATACAATAACATTTAATGTA+GGG | - | tig0025528:39136-39155 | Msa1423330:intron | 15.0% |
| !!! | AATTTTGTAATACAATTATG+TGG | - | tig0025528:39986-40005 | Msa1423330:intron | 15.0% |
| !!! | AAATGAAACAATTTTCAATT+AGG | + | tig0025528:40098-40117 | None:intergenic | 15.0% |
| !!! | CTTTGAAAATTATATAGAAT+TGG | - | tig0025528:40179-40198 | Msa1423330:intron | 15.0% |
| !!! | AAAAAACTATTCTTTCATTT+TGG | + | tig0025528:40297-40316 | None:intergenic | 15.0% |
| !!! | TGTTTTAAATGTTTATTGTT+GGG | - | tig0025528:40629-40648 | Msa1423330:intron | 15.0% |
| !!! | ATGATATTCATTTTCTAATT+TGG | - | tig0025528:41032-41051 | Msa1423330:intron | 15.0% |
| !!! | TGATATTCATTTTCTAATTT+GGG | - | tig0025528:41033-41052 | Msa1423330:intron | 15.0% |
| !! | GAATATATTTCTTGTATTTA+TGG | + | tig0025528:41542-41561 | None:intergenic | 15.0% |
| !! | TTATGAATATCAAAATGTAA+TGG | + | tig0025528:41624-41643 | None:intergenic | 15.0% |
| !!! | TTTGTTTTGTTTCTATTTTT+GGG | - | tig0025528:35823-35842 | Msa1423330:intron | 15.0% |
| !!! | TGTAATTGTAATTTGTAAAT+TGG | - | tig0025528:35883-35902 | Msa1423330:CDS | 15.0% |
| !!! | GTAATTGTAATTTGTAAATT+GGG | - | tig0025528:35884-35903 | Msa1423330:CDS | 15.0% |
| !!! | TAATTGTAATTTGTAAATTG+GGG | - | tig0025528:35885-35904 | Msa1423330:CDS | 15.0% |
| !! | ATAAGTATAACATAGTTAAA+AGG | + | tig0025528:37817-37836 | None:intergenic | 15.0% |
| !!! | TTTTACTTTTTCTCATTAAT+TGG | - | tig0025528:38123-38142 | Msa1423330:intron | 15.0% |
| !! | ATATGTGAGTATAAAAATAA+TGG | + | tig0025528:38651-38670 | None:intergenic | 15.0% |
| !! | TTGCTAAATATATATCTTTA+AGG | - | tig0025528:38682-38701 | Msa1423330:intron | 15.0% |
| !! | TGCTAAATATATATCTTTAA+GGG | - | tig0025528:38683-38702 | Msa1423330:intron | 15.0% |
| !!! | TATATTTTTTATATTCCACA+TGG | - | tig0025528:38732-38751 | Msa1423330:intron | 15.0% |
| !! | ATCCTATTCTATTATTATTT+AGG | + | tig0025528:38765-38784 | None:intergenic | 15.0% |
| !! | ATACAATAACATTTAATGTA+GGG | - | tig0025528:39136-39155 | Msa1423330:intron | 15.0% |
| !!! | AATTTTGTAATACAATTATG+TGG | - | tig0025528:39986-40005 | Msa1423330:intron | 15.0% |
| !!! | AAATGAAACAATTTTCAATT+AGG | + | tig0025528:40098-40117 | None:intergenic | 15.0% |
| !!! | CTTTGAAAATTATATAGAAT+TGG | - | tig0025528:40179-40198 | Msa1423330:intron | 15.0% |
| !!! | AAAAAACTATTCTTTCATTT+TGG | + | tig0025528:40297-40316 | None:intergenic | 15.0% |
| !!! | TGTTTTAAATGTTTATTGTT+GGG | - | tig0025528:40629-40648 | Msa1423330:intron | 15.0% |
| !!! | ATGATATTCATTTTCTAATT+TGG | - | tig0025528:41032-41051 | Msa1423330:intron | 15.0% |
| !!! | TGATATTCATTTTCTAATTT+GGG | - | tig0025528:41033-41052 | Msa1423330:intron | 15.0% |
| !! | GAATATATTTCTTGTATTTA+TGG | + | tig0025528:41542-41561 | None:intergenic | 15.0% |
| !! | TTATGAATATCAAAATGTAA+TGG | + | tig0025528:41624-41643 | None:intergenic | 15.0% |
| !!! | GTTTGTTTTGTTTCTATTTT+TGG | - | tig0025528:35822-35841 | Msa1423330:intron | 20.0% |
| !! | ATTTCACATATACAACAAAA+AGG | + | tig0025528:36864-36883 | None:intergenic | 20.0% |
| !!! | TCAGTTTATATTTTTAGCAT+CGG | - | tig0025528:37129-37148 | Msa1423330:intron | 20.0% |
| !!! | ATAATGGATATACTTTTGTT+TGG | - | tig0025528:38261-38280 | Msa1423330:intron | 20.0% |
| !! | TGTATAACTGTAGAAATAAA+TGG | + | tig0025528:38350-38369 | None:intergenic | 20.0% |
| !! | TCATATGTTTACACAATAAT+GGG | - | tig0025528:38613-38632 | Msa1423330:intron | 20.0% |
| !! | GCTAAATATATATCTTTAAG+GGG | - | tig0025528:38684-38703 | Msa1423330:intron | 20.0% |
| !! | GTCCTAAATAATAATAGAAT+AGG | - | tig0025528:38760-38779 | Msa1423330:intron | 20.0% |
| !! | GATACAATAACATTTAATGT+AGG | - | tig0025528:39135-39154 | Msa1423330:intron | 20.0% |
| !! | AAAAATCGAATTCTTTAACT+AGG | + | tig0025528:39173-39192 | None:intergenic | 20.0% |
| !! | TTCATGAACTTTGAATTATT+TGG | - | tig0025528:39435-39454 | Msa1423330:CDS | 20.0% |
| !! | CATATTTATTACTACTAAGT+TGG | - | tig0025528:39581-39600 | Msa1423330:intron | 20.0% |
| !! | ATTATGTGGTACAAAAATTA+CGG | + | tig0025528:39729-39748 | None:intergenic | 20.0% |
| !!! | GATTTTGTAATACAATTATG+TGG | + | tig0025528:39743-39762 | None:intergenic | 20.0% |
| !! | CAACAAAATTTGACATTAAT+TGG | + | tig0025528:39928-39947 | None:intergenic | 20.0% |
| !!! | TTATTTTGTTTTTTCAGCAA+AGG | - | tig0025528:40033-40052 | Msa1423330:intron | 20.0% |
| !! | TTCATGAAGTTATCAAATAA+GGG | + | tig0025528:40215-40234 | None:intergenic | 20.0% |
| !! | ATTCATGAAGTTATCAAATA+AGG | + | tig0025528:40216-40235 | None:intergenic | 20.0% |
| !! | ACTTCAAAAATAATTCTTGT+GGG | - | tig0025528:40476-40495 | Msa1423330:intron | 20.0% |
| !!! | CTGTTTTAAATGTTTATTGT+TGG | - | tig0025528:40628-40647 | Msa1423330:intron | 20.0% |
| !!! | GTTTTAAATGTTTATTGTTG+GGG | - | tig0025528:40630-40649 | Msa1423330:intron | 20.0% |
| !!! | ATGATTATAATGGATGAAAT+TGG | - | tig0025528:40701-40720 | Msa1423330:intron | 20.0% |
| !!! | ATTTTAGTTAAGAGTTTGTT+AGG | - | tig0025528:40783-40802 | Msa1423330:CDS | 20.0% |
| !!! | GTTACTAATAGTATTGAATA+TGG | - | tig0025528:40938-40957 | Msa1423330:CDS | 20.0% |
| !! | AAAAGATAAACATCATAAGT+TGG | + | tig0025528:41382-41401 | None:intergenic | 20.0% |
| !! | TATATTCTTGCTTATATTGA+TGG | - | tig0025528:41555-41574 | Msa1423330:intron | 20.0% |
| !! | TAAAATTAGAAATGGCATTT+GGG | + | tig0025528:42231-42250 | None:intergenic | 20.0% |
| !! | ATAAAATTAGAAATGGCATT+TGG | + | tig0025528:42232-42251 | None:intergenic | 20.0% |
| !!! | GTTTGTTTTGTTTCTATTTT+TGG | - | tig0025528:35822-35841 | Msa1423330:intron | 20.0% |
| !! | ATTTCACATATACAACAAAA+AGG | + | tig0025528:36864-36883 | None:intergenic | 20.0% |
| !!! | TCAGTTTATATTTTTAGCAT+CGG | - | tig0025528:37129-37148 | Msa1423330:intron | 20.0% |
| !!! | ATAATGGATATACTTTTGTT+TGG | - | tig0025528:38261-38280 | Msa1423330:intron | 20.0% |
| !! | TGTATAACTGTAGAAATAAA+TGG | + | tig0025528:38350-38369 | None:intergenic | 20.0% |
| !! | TCATATGTTTACACAATAAT+GGG | - | tig0025528:38613-38632 | Msa1423330:intron | 20.0% |
| !! | GCTAAATATATATCTTTAAG+GGG | - | tig0025528:38684-38703 | Msa1423330:intron | 20.0% |
| !! | GTCCTAAATAATAATAGAAT+AGG | - | tig0025528:38760-38779 | Msa1423330:intron | 20.0% |
| !! | GATACAATAACATTTAATGT+AGG | - | tig0025528:39135-39154 | Msa1423330:intron | 20.0% |
| !! | AAAAATCGAATTCTTTAACT+AGG | + | tig0025528:39173-39192 | None:intergenic | 20.0% |
| !! | TTCATGAACTTTGAATTATT+TGG | - | tig0025528:39435-39454 | Msa1423330:CDS | 20.0% |
| !! | CATATTTATTACTACTAAGT+TGG | - | tig0025528:39581-39600 | Msa1423330:intron | 20.0% |
| !! | ATTATGTGGTACAAAAATTA+CGG | + | tig0025528:39729-39748 | None:intergenic | 20.0% |
| !!! | GATTTTGTAATACAATTATG+TGG | + | tig0025528:39743-39762 | None:intergenic | 20.0% |
| !! | CAACAAAATTTGACATTAAT+TGG | + | tig0025528:39928-39947 | None:intergenic | 20.0% |
| !!! | TTATTTTGTTTTTTCAGCAA+AGG | - | tig0025528:40033-40052 | Msa1423330:intron | 20.0% |
| !! | TTCATGAAGTTATCAAATAA+GGG | + | tig0025528:40215-40234 | None:intergenic | 20.0% |
| !! | ATTCATGAAGTTATCAAATA+AGG | + | tig0025528:40216-40235 | None:intergenic | 20.0% |
| !! | ACTTCAAAAATAATTCTTGT+GGG | - | tig0025528:40476-40495 | Msa1423330:intron | 20.0% |
| !!! | CTGTTTTAAATGTTTATTGT+TGG | - | tig0025528:40628-40647 | Msa1423330:intron | 20.0% |
| !!! | GTTTTAAATGTTTATTGTTG+GGG | - | tig0025528:40630-40649 | Msa1423330:intron | 20.0% |
| !!! | ATGATTATAATGGATGAAAT+TGG | - | tig0025528:40701-40720 | Msa1423330:intron | 20.0% |
| !!! | ATTTTAGTTAAGAGTTTGTT+AGG | - | tig0025528:40783-40802 | Msa1423330:CDS | 20.0% |
| !!! | GTTACTAATAGTATTGAATA+TGG | - | tig0025528:40938-40957 | Msa1423330:CDS | 20.0% |
| !! | AAAAGATAAACATCATAAGT+TGG | + | tig0025528:41382-41401 | None:intergenic | 20.0% |
| !! | TATATTCTTGCTTATATTGA+TGG | - | tig0025528:41555-41574 | Msa1423330:intron | 20.0% |
| !! | TAAAATTAGAAATGGCATTT+GGG | + | tig0025528:42231-42250 | None:intergenic | 20.0% |
| !! | ATAAAATTAGAAATGGCATT+TGG | + | tig0025528:42232-42251 | None:intergenic | 20.0% |
| !!! | ATCGAATTTTGAAGTTGAAT+CGG | + | tig0025528:34966-34985 | None:intergenic | 25.0% |
| ! | AAAATGATTGAATTTAACCG+CGG | - | tig0025528:35247-35266 | Msa1423330:CDS | 25.0% |
| ! | ACAAACAATTGAATGTTGTT+AGG | - | tig0025528:35398-35417 | Msa1423330:intron | 25.0% |
| !! | TATGTATGGATTGTGAAATT+TGG | - | tig0025528:35787-35806 | Msa1423330:intron | 25.0% |
| !!! | TTCTATTTTTGGGTTGTAAA+AGG | - | tig0025528:35833-35852 | Msa1423330:intron | 25.0% |
| ! | AGTTTGCCAAATTTATAGTT+GGG | - | tig0025528:35943-35962 | Msa1423330:intron | 25.0% |
| ! | TCATGTAAGTCTAGATAAAT+AGG | - | tig0025528:36033-36052 | Msa1423330:intron | 25.0% |
| ! | ATTATTATTAAGAGCCTGAT+AGG | + | tig0025528:36223-36242 | None:intergenic | 25.0% |
| ! | ACAATAGAACATACAAAGAA+CGG | + | tig0025528:36611-36630 | None:intergenic | 25.0% |
| !! | TGTTGCAAACTTTTATCAAT+TGG | - | tig0025528:36697-36716 | Msa1423330:intron | 25.0% |
| !! | ACTTTTATCAATTGGATAGT+TGG | - | tig0025528:36705-36724 | Msa1423330:intron | 25.0% |
| ! | AAATATGACAAGGAAAGAAA+AGG | + | tig0025528:36899-36918 | None:intergenic | 25.0% |
| ! | TGAATGTTTAAATCTTGAAC+AGG | - | tig0025528:36976-36995 | Msa1423330:intron | 25.0% |
| ! | AGCATAATCAGAAATTTAGA+TGG | + | tig0025528:37359-37378 | None:intergenic | 25.0% |
| ! | ATCTAAATTTCTGATTATGC+TGG | - | tig0025528:37358-37377 | Msa1423330:intron | 25.0% |
| !!! | TCTAGAATAAATTTTGCTCT+TGG | - | tig0025528:37657-37676 | Msa1423330:intron | 25.0% |
| !! | CTAGAATAAATTTTGCTCTT+GGG | - | tig0025528:37658-37677 | Msa1423330:intron | 25.0% |
| !!! | AATAAGTACAGAAGTTTTGA+AGG | + | tig0025528:37943-37962 | None:intergenic | 25.0% |
| ! | TATAAAGGATTTGGAAAGTA+AGG | - | tig0025528:38070-38089 | Msa1423330:intron | 25.0% |
| ! | TTAATGACATCAACAATAGA+GGG | + | tig0025528:38379-38398 | None:intergenic | 25.0% |
| ! | ATTAATGACATCAACAATAG+AGG | + | tig0025528:38380-38399 | None:intergenic | 25.0% |
| ! | CATCATGATTTCAAAACTAT+AGG | + | tig0025528:38587-38606 | None:intergenic | 25.0% |
| ! | GTCATATGTTTACACAATAA+TGG | - | tig0025528:38612-38631 | Msa1423330:intron | 25.0% |
| !! | GGCATATTTTTCATTTAACT+CGG | - | tig0025528:39075-39094 | Msa1423330:intron | 25.0% |
| !!! | TCTGTTTTTTCATGAAAGTT+GGG | + | tig0025528:39117-39136 | None:intergenic | 25.0% |
| !!! | ATCTGTTTTTTCATGAAAGT+TGG | + | tig0025528:39118-39137 | None:intergenic | 25.0% |
| ! | AAAGATTTGTGATTATTGAC+GGG | + | tig0025528:39256-39275 | None:intergenic | 25.0% |
| ! | GAAAGATTTGTGATTATTGA+CGG | + | tig0025528:39257-39276 | None:intergenic | 25.0% |
| ! | AGTTATAATTCAAGTCTTAG+AGG | - | tig0025528:39321-39340 | Msa1423330:intron | 25.0% |
| !! | TTTGTTTCCTTGATTTTTGT+TGG | - | tig0025528:39354-39373 | Msa1423330:intron | 25.0% |
| ! | ATAACAAAATAATGTGGACA+GGG | + | tig0025528:39519-39538 | None:intergenic | 25.0% |
| ! | GCAATATATATATATCACCA+TGG | - | tig0025528:39679-39698 | Msa1423330:intron | 25.0% |
| ! | ATTTATTAAGTTTGACACCA+TGG | + | tig0025528:39699-39718 | None:intergenic | 25.0% |
| !!! | GATAATAGCTTTAAATCCAA+AGG | + | tig0025528:39768-39787 | None:intergenic | 25.0% |
| !! | GATAATAGTTTTCAATCCAA+CGG | - | tig0025528:39961-39980 | Msa1423330:intron | 25.0% |
| !!! | TATTGTTTAATTTGACACCA+TGG | - | tig0025528:40061-40080 | Msa1423330:intron | 25.0% |
| !!! | TATCGACAGTTTTATACATT+TGG | + | tig0025528:40340-40359 | None:intergenic | 25.0% |
| ! | GTCTAAATGATTATGTTTCA+TGG | + | tig0025528:40383-40402 | None:intergenic | 25.0% |
| ! | AAACATAATCATTTAGACCA+TGG | - | tig0025528:40385-40404 | Msa1423330:intron | 25.0% |
| ! | CACTTCAAAAATAATTCTTG+TGG | - | tig0025528:40475-40494 | Msa1423330:intron | 25.0% |
| ! | ATTACCAAGGATGATTATAA+TGG | - | tig0025528:40691-40710 | Msa1423330:intron | 25.0% |
| ! | ATGAATATAACAATTCCGTT+TGG | - | tig0025528:41088-41107 | Msa1423330:intron | 25.0% |
| ! | TCGTTTACTAACTAAATATG+AGG | + | tig0025528:41162-41181 | None:intergenic | 25.0% |
| ! | CATAATTGAAGGATGAAAAA+AGG | + | tig0025528:41449-41468 | None:intergenic | 25.0% |
| !!! | TCAAAATGTAATGGATAATC+TGG | + | tig0025528:41615-41634 | None:intergenic | 25.0% |
| !! | AAATAGGAATTACGTTTTCA+TGG | + | tig0025528:41676-41695 | None:intergenic | 25.0% |
| ! | AGAATAAATACAAGGCTAAA+AGG | + | tig0025528:41821-41840 | None:intergenic | 25.0% |
| ! | ACAACGAAAGAATAAATACA+AGG | + | tig0025528:41829-41848 | None:intergenic | 25.0% |
| !! | TCTGAAATTGTACCAATATT+AGG | - | tig0025528:41933-41952 | Msa1423330:intron | 25.0% |
| ! | AATTCTCATGAACCTAATAT+TGG | + | tig0025528:41948-41967 | None:intergenic | 25.0% |
| ! | AAAGATACAAGCAAGAAAAT+AGG | - | tig0025528:42096-42115 | Msa1423330:CDS | 25.0% |
| !!! | ATCGAATTTTGAAGTTGAAT+CGG | + | tig0025528:34966-34985 | None:intergenic | 25.0% |
| ! | AAAATGATTGAATTTAACCG+CGG | - | tig0025528:35247-35266 | Msa1423330:CDS | 25.0% |
| ! | ACAAACAATTGAATGTTGTT+AGG | - | tig0025528:35398-35417 | Msa1423330:intron | 25.0% |
| !! | TATGTATGGATTGTGAAATT+TGG | - | tig0025528:35787-35806 | Msa1423330:intron | 25.0% |
| !!! | TTCTATTTTTGGGTTGTAAA+AGG | - | tig0025528:35833-35852 | Msa1423330:intron | 25.0% |
| ! | AGTTTGCCAAATTTATAGTT+GGG | - | tig0025528:35943-35962 | Msa1423330:intron | 25.0% |
| ! | TCATGTAAGTCTAGATAAAT+AGG | - | tig0025528:36033-36052 | Msa1423330:intron | 25.0% |
| ! | ATTATTATTAAGAGCCTGAT+AGG | + | tig0025528:36223-36242 | None:intergenic | 25.0% |
| ! | ACAATAGAACATACAAAGAA+CGG | + | tig0025528:36611-36630 | None:intergenic | 25.0% |
| !! | TGTTGCAAACTTTTATCAAT+TGG | - | tig0025528:36697-36716 | Msa1423330:intron | 25.0% |
| !! | ACTTTTATCAATTGGATAGT+TGG | - | tig0025528:36705-36724 | Msa1423330:intron | 25.0% |
| ! | AAATATGACAAGGAAAGAAA+AGG | + | tig0025528:36899-36918 | None:intergenic | 25.0% |
| ! | TGAATGTTTAAATCTTGAAC+AGG | - | tig0025528:36976-36995 | Msa1423330:intron | 25.0% |
| ! | AGCATAATCAGAAATTTAGA+TGG | + | tig0025528:37359-37378 | None:intergenic | 25.0% |
| ! | ATCTAAATTTCTGATTATGC+TGG | - | tig0025528:37358-37377 | Msa1423330:intron | 25.0% |
| !!! | TCTAGAATAAATTTTGCTCT+TGG | - | tig0025528:37657-37676 | Msa1423330:intron | 25.0% |
| !! | CTAGAATAAATTTTGCTCTT+GGG | - | tig0025528:37658-37677 | Msa1423330:intron | 25.0% |
| !!! | AATAAGTACAGAAGTTTTGA+AGG | + | tig0025528:37943-37962 | None:intergenic | 25.0% |
| ! | TATAAAGGATTTGGAAAGTA+AGG | - | tig0025528:38070-38089 | Msa1423330:intron | 25.0% |
| ! | TTAATGACATCAACAATAGA+GGG | + | tig0025528:38379-38398 | None:intergenic | 25.0% |
| ! | ATTAATGACATCAACAATAG+AGG | + | tig0025528:38380-38399 | None:intergenic | 25.0% |
| ! | CATCATGATTTCAAAACTAT+AGG | + | tig0025528:38587-38606 | None:intergenic | 25.0% |
| ! | GTCATATGTTTACACAATAA+TGG | - | tig0025528:38612-38631 | Msa1423330:intron | 25.0% |
| !! | GGCATATTTTTCATTTAACT+CGG | - | tig0025528:39075-39094 | Msa1423330:intron | 25.0% |
| !!! | TCTGTTTTTTCATGAAAGTT+GGG | + | tig0025528:39117-39136 | None:intergenic | 25.0% |
| !!! | ATCTGTTTTTTCATGAAAGT+TGG | + | tig0025528:39118-39137 | None:intergenic | 25.0% |
| ! | AAAGATTTGTGATTATTGAC+GGG | + | tig0025528:39256-39275 | None:intergenic | 25.0% |
| ! | GAAAGATTTGTGATTATTGA+CGG | + | tig0025528:39257-39276 | None:intergenic | 25.0% |
| ! | AGTTATAATTCAAGTCTTAG+AGG | - | tig0025528:39321-39340 | Msa1423330:intron | 25.0% |
| !! | TTTGTTTCCTTGATTTTTGT+TGG | - | tig0025528:39354-39373 | Msa1423330:intron | 25.0% |
| ! | ATAACAAAATAATGTGGACA+GGG | + | tig0025528:39519-39538 | None:intergenic | 25.0% |
| ! | GCAATATATATATATCACCA+TGG | - | tig0025528:39679-39698 | Msa1423330:intron | 25.0% |
| ! | ATTTATTAAGTTTGACACCA+TGG | + | tig0025528:39699-39718 | None:intergenic | 25.0% |
| !!! | GATAATAGCTTTAAATCCAA+AGG | + | tig0025528:39768-39787 | None:intergenic | 25.0% |
| !! | GATAATAGTTTTCAATCCAA+CGG | - | tig0025528:39961-39980 | Msa1423330:intron | 25.0% |
| !!! | TATTGTTTAATTTGACACCA+TGG | - | tig0025528:40061-40080 | Msa1423330:intron | 25.0% |
| !!! | TATCGACAGTTTTATACATT+TGG | + | tig0025528:40340-40359 | None:intergenic | 25.0% |
| ! | GTCTAAATGATTATGTTTCA+TGG | + | tig0025528:40383-40402 | None:intergenic | 25.0% |
| ! | AAACATAATCATTTAGACCA+TGG | - | tig0025528:40385-40404 | Msa1423330:intron | 25.0% |
| ! | CACTTCAAAAATAATTCTTG+TGG | - | tig0025528:40475-40494 | Msa1423330:intron | 25.0% |
| ! | ATTACCAAGGATGATTATAA+TGG | - | tig0025528:40691-40710 | Msa1423330:intron | 25.0% |
| ! | ATGAATATAACAATTCCGTT+TGG | - | tig0025528:41088-41107 | Msa1423330:intron | 25.0% |
| ! | TCGTTTACTAACTAAATATG+AGG | + | tig0025528:41162-41181 | None:intergenic | 25.0% |
| ! | CATAATTGAAGGATGAAAAA+AGG | + | tig0025528:41449-41468 | None:intergenic | 25.0% |
| !!! | TCAAAATGTAATGGATAATC+TGG | + | tig0025528:41615-41634 | None:intergenic | 25.0% |
| !! | AAATAGGAATTACGTTTTCA+TGG | + | tig0025528:41676-41695 | None:intergenic | 25.0% |
| ! | AGAATAAATACAAGGCTAAA+AGG | + | tig0025528:41821-41840 | None:intergenic | 25.0% |
| ! | ACAACGAAAGAATAAATACA+AGG | + | tig0025528:41829-41848 | None:intergenic | 25.0% |
| !! | TCTGAAATTGTACCAATATT+AGG | - | tig0025528:41933-41952 | Msa1423330:intron | 25.0% |
| ! | AATTCTCATGAACCTAATAT+TGG | + | tig0025528:41948-41967 | None:intergenic | 25.0% |
| ! | AAAGATACAAGCAAGAAAAT+AGG | - | tig0025528:42096-42115 | Msa1423330:CDS | 25.0% |
| ! | TTTGAAGTTGAATCGGTTAT+CGG | + | tig0025528:34959-34978 | None:intergenic | 30.0% |
| !!! | TTTAGTTTTTCGCATGGTTT+GGG | + | tig0025528:34990-35009 | None:intergenic | 30.0% |
| AATTTACACGGAAAGAGTAA+GGG | + | tig0025528:35160-35179 | None:intergenic | 30.0% | |
| AAATTTACACGGAAAGAGTA+AGG | + | tig0025528:35161-35180 | None:intergenic | 30.0% | |
| AAGATAGCACGAAATTTACA+CGG | + | tig0025528:35172-35191 | None:intergenic | 30.0% | |
| AAATTTCGTGCTATCTTCAT+CGG | - | tig0025528:35175-35194 | Msa1423330:three_prime_UTR | 30.0% | |
| GGCTTCTAATAATGAACTAA+GGG | - | tig0025528:35210-35229 | Msa1423330:exon | 30.0% | |
| ATGAACTAAGGGATTCAATT+CGG | - | tig0025528:35221-35240 | Msa1423330:CDS | 30.0% | |
| AAGAATATGGTGAATGTGTA+TGG | - | tig0025528:35493-35512 | Msa1423330:intron | 30.0% | |
| ! | TGTAATTTGTAAATTGGGGT+AGG | - | tig0025528:35889-35908 | Msa1423330:CDS | 30.0% |
| GAGTTTGCCAAATTTATAGT+TGG | - | tig0025528:35942-35961 | Msa1423330:CDS | 30.0% | |
| CTATCACCCAACTATAAATT+TGG | + | tig0025528:35952-35971 | None:intergenic | 30.0% | |
| ! | TCAAGTTGTTTATCCAAACA+AGG | + | tig0025528:36002-36021 | None:intergenic | 30.0% |
| !! | GCTGTTTTCATAAGCTATTT+TGG | - | tig0025528:36110-36129 | Msa1423330:CDS | 30.0% |
| !! | AAGCTATTTTGGATAGCTTA+TGG | - | tig0025528:36121-36140 | Msa1423330:CDS | 30.0% |
| !!! | ATTTGTTTTTTAAACCCTGC+TGG | - | tig0025528:36241-36260 | Msa1423330:intron | 30.0% |
| ATGGATGATGATCTTATTGT+AGG | - | tig0025528:36336-36355 | Msa1423330:intron | 30.0% | |
| TGGATGATGATCTTATTGTA+GGG | - | tig0025528:36337-36356 | Msa1423330:intron | 30.0% | |
| ! | TGATCTTATTGTAGGGATTT+TGG | - | tig0025528:36344-36363 | Msa1423330:intron | 30.0% |
| TTTGTTGAAACCTGTTATTG+AGG | - | tig0025528:36382-36401 | Msa1423330:intron | 30.0% | |
| ! | ATTGCTCTTATTTGATTGTC+AGG | - | tig0025528:36505-36524 | Msa1423330:intron | 30.0% |
| ! | AAAGTCTTCATTTTCTTCCT+GGG | - | tig0025528:36544-36563 | Msa1423330:intron | 30.0% |
| ACATCACAAGATAAGATACA+TGG | + | tig0025528:36680-36699 | None:intergenic | 30.0% | |
| ACGTCAAATGAAATATGACA+AGG | + | tig0025528:36909-36928 | None:intergenic | 30.0% | |
| !!! | ACTGCTTAAAGACTAGTTTT+AGG | - | tig0025528:37586-37605 | Msa1423330:intron | 30.0% |
| CATCTGCAATAGTATAGAAT+AGG | + | tig0025528:38015-38034 | None:intergenic | 30.0% | |
| ATTCTATACTATTGCAGATG+TGG | - | tig0025528:38015-38034 | Msa1423330:intron | 30.0% | |
| TTCTATACTATTGCAGATGT+GGG | - | tig0025528:38016-38035 | Msa1423330:intron | 30.0% | |
| AAATCCTTTATACAGCTTTG+GGG | + | tig0025528:38062-38081 | None:intergenic | 30.0% | |
| CAAATCCTTTATACAGCTTT+GGG | + | tig0025528:38063-38082 | None:intergenic | 30.0% | |
| ATGAGAAAAAGTAAAACCTG+AGG | + | tig0025528:38119-38138 | None:intergenic | 30.0% | |
| !! | ATGGATATACTTTTGTTTGG+AGG | - | tig0025528:38264-38283 | Msa1423330:intron | 30.0% |
| TAGCATTCATATACTGAAAC+AGG | - | tig0025528:38417-38436 | Msa1423330:intron | 30.0% | |
| !!! | AAGCTTTTTGAAGTTCTCAT+GGG | - | tig0025528:38448-38467 | Msa1423330:intron | 30.0% |
| !!! | TAGTTTTGAAATCATGATGC+TGG | - | tig0025528:38588-38607 | Msa1423330:intron | 30.0% |
| ATGGAATACAAAGCTTGATT+GGG | - | tig0025528:38819-38838 | Msa1423330:CDS | 30.0% | |
| TCATGAAAGTTGGGATAAAA+AGG | + | tig0025528:39108-39127 | None:intergenic | 30.0% | |
| AAGATTTGTGATTATTGACG+GGG | + | tig0025528:39255-39274 | None:intergenic | 30.0% | |
| GTAAGTACCAACAAAAATCA+AGG | + | tig0025528:39364-39383 | None:intergenic | 30.0% | |
| GATAACAAAATAATGTGGAC+AGG | + | tig0025528:39520-39539 | None:intergenic | 30.0% | |
| ACTGGGATAACAAAATAATG+TGG | + | tig0025528:39525-39544 | None:intergenic | 30.0% | |
| !! | TTATTTTGTTATCCCAGTTC+TGG | - | tig0025528:39527-39546 | Msa1423330:intron | 30.0% |
| !! | TATTTTGTTATCCCAGTTCT+GGG | - | tig0025528:39528-39547 | Msa1423330:intron | 30.0% |
| TGTATTACAAAATCCACCTT+TGG | - | tig0025528:39749-39768 | Msa1423330:intron | 30.0% | |
| !! | AATAGCTTTAAATCCAAAGG+TGG | + | tig0025528:39765-39784 | None:intergenic | 30.0% |
| TGTATTACAAAATTCACCGT+TGG | + | tig0025528:39980-39999 | None:intergenic | 30.0% | |
| ATAATCATTTAGACCATGGT+GGG | - | tig0025528:40389-40408 | Msa1423330:intron | 30.0% | |
| ! | GTTTAACTCTTATTTCTTGC+AGG | - | tig0025528:40661-40680 | Msa1423330:intron | 30.0% |
| TCATCCATTATAATCATCCT+TGG | + | tig0025528:40698-40717 | None:intergenic | 30.0% | |
| AATGGATGAAATTGGAAAAC+AGG | - | tig0025528:40709-40728 | Msa1423330:intron | 30.0% | |
| AGGAATTAGTTAGTTGCATA+TGG | - | tig0025528:40803-40822 | Msa1423330:CDS | 30.0% | |
| !! | TCCAATATAAGTGTTGGAAA+GGG | + | tig0025528:40917-40936 | None:intergenic | 30.0% |
| !! | ATCCAATATAAGTGTTGGAA+AGG | + | tig0025528:40918-40937 | None:intergenic | 30.0% |
| GTAACATCCAATATAAGTGT+TGG | + | tig0025528:40923-40942 | None:intergenic | 30.0% | |
| ATGTAATTGTACACACCAAA+CGG | + | tig0025528:41106-41125 | None:intergenic | 30.0% | |
| TTAGCGATAAGTCTCAAAAA+AGG | + | tig0025528:41309-41328 | None:intergenic | 30.0% | |
| ! | TTTTCTTGTCAGTATCATCA+AGG | - | tig0025528:41398-41417 | Msa1423330:intron | 30.0% |
| !! | GCATTGTTTTGCTATCTATT+CGG | - | tig0025528:41492-41511 | Msa1423330:intron | 30.0% |
| ! | TCCATCATGACATCTTTTAT+GGG | + | tig0025528:41781-41800 | None:intergenic | 30.0% |
| ! | TTCCATCATGACATCTTTTA+TGG | + | tig0025528:41782-41801 | None:intergenic | 30.0% |
| ! | AAGATGTCATGATGGAAAAT+TGG | - | tig0025528:41785-41804 | Msa1423330:CDS | 30.0% |
| CCATAAAAACAGAACTTACA+CGG | + | tig0025528:41895-41914 | None:intergenic | 30.0% | |
| !!! | GTTCTGTTTTTATGGACTTA+CGG | - | tig0025528:41900-41919 | Msa1423330:CDS | 30.0% |
| ATTGTAACTGGCAGAAAAAA+TGG | + | tig0025528:42044-42063 | None:intergenic | 30.0% | |
| !!! | TTTTTTCCCTTTCACTTGAA+AGG | - | tig0025528:42351-42370 | Msa1423330:CDS | 30.0% |
| ! | TTTGAAGTTGAATCGGTTAT+CGG | + | tig0025528:34959-34978 | None:intergenic | 30.0% |
| !!! | TTTAGTTTTTCGCATGGTTT+GGG | + | tig0025528:34990-35009 | None:intergenic | 30.0% |
| AATTTACACGGAAAGAGTAA+GGG | + | tig0025528:35160-35179 | None:intergenic | 30.0% | |
| AAATTTACACGGAAAGAGTA+AGG | + | tig0025528:35161-35180 | None:intergenic | 30.0% | |
| AAGATAGCACGAAATTTACA+CGG | + | tig0025528:35172-35191 | None:intergenic | 30.0% | |
| AAATTTCGTGCTATCTTCAT+CGG | - | tig0025528:35175-35194 | Msa1423330:three_prime_UTR | 30.0% | |
| GGCTTCTAATAATGAACTAA+GGG | - | tig0025528:35210-35229 | Msa1423330:exon | 30.0% | |
| ATGAACTAAGGGATTCAATT+CGG | - | tig0025528:35221-35240 | Msa1423330:CDS | 30.0% | |
| AAGAATATGGTGAATGTGTA+TGG | - | tig0025528:35493-35512 | Msa1423330:intron | 30.0% | |
| ! | TGTAATTTGTAAATTGGGGT+AGG | - | tig0025528:35889-35908 | Msa1423330:CDS | 30.0% |
| GAGTTTGCCAAATTTATAGT+TGG | - | tig0025528:35942-35961 | Msa1423330:CDS | 30.0% | |
| CTATCACCCAACTATAAATT+TGG | + | tig0025528:35952-35971 | None:intergenic | 30.0% | |
| ! | TCAAGTTGTTTATCCAAACA+AGG | + | tig0025528:36002-36021 | None:intergenic | 30.0% |
| !! | GCTGTTTTCATAAGCTATTT+TGG | - | tig0025528:36110-36129 | Msa1423330:CDS | 30.0% |
| !! | AAGCTATTTTGGATAGCTTA+TGG | - | tig0025528:36121-36140 | Msa1423330:CDS | 30.0% |
| !!! | ATTTGTTTTTTAAACCCTGC+TGG | - | tig0025528:36241-36260 | Msa1423330:intron | 30.0% |
| ATGGATGATGATCTTATTGT+AGG | - | tig0025528:36336-36355 | Msa1423330:intron | 30.0% | |
| TGGATGATGATCTTATTGTA+GGG | - | tig0025528:36337-36356 | Msa1423330:intron | 30.0% | |
| ! | TGATCTTATTGTAGGGATTT+TGG | - | tig0025528:36344-36363 | Msa1423330:intron | 30.0% |
| TTTGTTGAAACCTGTTATTG+AGG | - | tig0025528:36382-36401 | Msa1423330:intron | 30.0% | |
| ! | ATTGCTCTTATTTGATTGTC+AGG | - | tig0025528:36505-36524 | Msa1423330:intron | 30.0% |
| ! | AAAGTCTTCATTTTCTTCCT+GGG | - | tig0025528:36544-36563 | Msa1423330:intron | 30.0% |
| ACATCACAAGATAAGATACA+TGG | + | tig0025528:36680-36699 | None:intergenic | 30.0% | |
| ACGTCAAATGAAATATGACA+AGG | + | tig0025528:36909-36928 | None:intergenic | 30.0% | |
| !!! | ACTGCTTAAAGACTAGTTTT+AGG | - | tig0025528:37586-37605 | Msa1423330:intron | 30.0% |
| CATCTGCAATAGTATAGAAT+AGG | + | tig0025528:38015-38034 | None:intergenic | 30.0% | |
| ATTCTATACTATTGCAGATG+TGG | - | tig0025528:38015-38034 | Msa1423330:intron | 30.0% | |
| TTCTATACTATTGCAGATGT+GGG | - | tig0025528:38016-38035 | Msa1423330:intron | 30.0% | |
| AAATCCTTTATACAGCTTTG+GGG | + | tig0025528:38062-38081 | None:intergenic | 30.0% | |
| CAAATCCTTTATACAGCTTT+GGG | + | tig0025528:38063-38082 | None:intergenic | 30.0% | |
| ATGAGAAAAAGTAAAACCTG+AGG | + | tig0025528:38119-38138 | None:intergenic | 30.0% | |
| !! | ATGGATATACTTTTGTTTGG+AGG | - | tig0025528:38264-38283 | Msa1423330:intron | 30.0% |
| TAGCATTCATATACTGAAAC+AGG | - | tig0025528:38417-38436 | Msa1423330:intron | 30.0% | |
| !!! | AAGCTTTTTGAAGTTCTCAT+GGG | - | tig0025528:38448-38467 | Msa1423330:intron | 30.0% |
| !!! | TAGTTTTGAAATCATGATGC+TGG | - | tig0025528:38588-38607 | Msa1423330:intron | 30.0% |
| ATGGAATACAAAGCTTGATT+GGG | - | tig0025528:38819-38838 | Msa1423330:CDS | 30.0% | |
| TCATGAAAGTTGGGATAAAA+AGG | + | tig0025528:39108-39127 | None:intergenic | 30.0% | |
| AAGATTTGTGATTATTGACG+GGG | + | tig0025528:39255-39274 | None:intergenic | 30.0% | |
| GTAAGTACCAACAAAAATCA+AGG | + | tig0025528:39364-39383 | None:intergenic | 30.0% | |
| GATAACAAAATAATGTGGAC+AGG | + | tig0025528:39520-39539 | None:intergenic | 30.0% | |
| ACTGGGATAACAAAATAATG+TGG | + | tig0025528:39525-39544 | None:intergenic | 30.0% | |
| !! | TTATTTTGTTATCCCAGTTC+TGG | - | tig0025528:39527-39546 | Msa1423330:intron | 30.0% |
| !! | TATTTTGTTATCCCAGTTCT+GGG | - | tig0025528:39528-39547 | Msa1423330:intron | 30.0% |
| TGTATTACAAAATCCACCTT+TGG | - | tig0025528:39749-39768 | Msa1423330:intron | 30.0% | |
| !! | AATAGCTTTAAATCCAAAGG+TGG | + | tig0025528:39765-39784 | None:intergenic | 30.0% |
| TGTATTACAAAATTCACCGT+TGG | + | tig0025528:39980-39999 | None:intergenic | 30.0% | |
| ATAATCATTTAGACCATGGT+GGG | - | tig0025528:40389-40408 | Msa1423330:intron | 30.0% | |
| ! | GTTTAACTCTTATTTCTTGC+AGG | - | tig0025528:40661-40680 | Msa1423330:intron | 30.0% |
| TCATCCATTATAATCATCCT+TGG | + | tig0025528:40698-40717 | None:intergenic | 30.0% | |
| AATGGATGAAATTGGAAAAC+AGG | - | tig0025528:40709-40728 | Msa1423330:intron | 30.0% | |
| AGGAATTAGTTAGTTGCATA+TGG | - | tig0025528:40803-40822 | Msa1423330:CDS | 30.0% | |
| !! | TCCAATATAAGTGTTGGAAA+GGG | + | tig0025528:40917-40936 | None:intergenic | 30.0% |
| !! | ATCCAATATAAGTGTTGGAA+AGG | + | tig0025528:40918-40937 | None:intergenic | 30.0% |
| GTAACATCCAATATAAGTGT+TGG | + | tig0025528:40923-40942 | None:intergenic | 30.0% | |
| ATGTAATTGTACACACCAAA+CGG | + | tig0025528:41106-41125 | None:intergenic | 30.0% | |
| TTAGCGATAAGTCTCAAAAA+AGG | + | tig0025528:41309-41328 | None:intergenic | 30.0% | |
| ! | TTTTCTTGTCAGTATCATCA+AGG | - | tig0025528:41398-41417 | Msa1423330:intron | 30.0% |
| !! | GCATTGTTTTGCTATCTATT+CGG | - | tig0025528:41492-41511 | Msa1423330:intron | 30.0% |
| ! | TCCATCATGACATCTTTTAT+GGG | + | tig0025528:41781-41800 | None:intergenic | 30.0% |
| ! | TTCCATCATGACATCTTTTA+TGG | + | tig0025528:41782-41801 | None:intergenic | 30.0% |
| ! | AAGATGTCATGATGGAAAAT+TGG | - | tig0025528:41785-41804 | Msa1423330:CDS | 30.0% |
| CCATAAAAACAGAACTTACA+CGG | + | tig0025528:41895-41914 | None:intergenic | 30.0% | |
| !!! | GTTCTGTTTTTATGGACTTA+CGG | - | tig0025528:41900-41919 | Msa1423330:CDS | 30.0% |
| ATTGTAACTGGCAGAAAAAA+TGG | + | tig0025528:42044-42063 | None:intergenic | 30.0% | |
| !!! | TTTTTTCCCTTTCACTTGAA+AGG | - | tig0025528:42351-42370 | Msa1423330:CDS | 30.0% |
| !!! | GTTTAGTTTTTCGCATGGTT+TGG | + | tig0025528:34991-35010 | None:intergenic | 35.0% |
| GTTCTCATTTCTTTCGTTCT+AGG | - | tig0025528:35043-35062 | Msa1423330:three_prime_UTR | 35.0% | |
| !!! | TCTTCATCGGTTTCAGTTTT+AGG | - | tig0025528:35188-35207 | Msa1423330:three_prime_UTR | 35.0% |
| !!! | CTTCATCGGTTTCAGTTTTA+GGG | - | tig0025528:35189-35208 | Msa1423330:three_prime_UTR | 35.0% |
| GGGCTTCTAATAATGAACTA+AGG | - | tig0025528:35209-35228 | Msa1423330:exon | 35.0% | |
| !!! | GAAGTCAATGCTGTTGATTT+TGG | - | tig0025528:35427-35446 | Msa1423330:intron | 35.0% |
| GGATGAATTGGTGAAGAATA+TGG | - | tig0025528:35480-35499 | Msa1423330:intron | 35.0% | |
| TATAGTGTTGTGGTGGTAAA+TGG | - | tig0025528:35529-35548 | Msa1423330:intron | 35.0% | |
| ATAGTGTTGTGGTGGTAAAT+GGG | - | tig0025528:35530-35549 | Msa1423330:intron | 35.0% | |
| ! | TTTGGTAAGGTGTTTGTGAA+TGG | - | tig0025528:35649-35668 | Msa1423330:intron | 35.0% |
| AATCATAAACCCAATCCCTT+GGG | + | tig0025528:35765-35784 | None:intergenic | 35.0% | |
| GGGTTTATGATTGGTATGTA+TGG | - | tig0025528:35773-35792 | Msa1423330:intron | 35.0% | |
| !!! | GTTGTAAAAGGTGCTGTTTT+TGG | - | tig0025528:35845-35864 | Msa1423330:intron | 35.0% |
| AATCACATAGACAGTCTCAT+AGG | - | tig0025528:36162-36181 | Msa1423330:intron | 35.0% | |
| ACAATTAAGCCAATCCTATC+AGG | - | tig0025528:36206-36225 | Msa1423330:intron | 35.0% | |
| TATTAAGAGCCTGATAGGAT+TGG | + | tig0025528:36218-36237 | None:intergenic | 35.0% | |
| ! | TAAGTTTGAAGTCTGTGTGA+TGG | - | tig0025528:36317-36336 | Msa1423330:intron | 35.0% |
| ! | AAAATGAAGACTTTGGTGTG+TGG | + | tig0025528:36538-36557 | None:intergenic | 35.0% |
| CAGGAAGAAAATGAAGACTT+TGG | + | tig0025528:36545-36564 | None:intergenic | 35.0% | |
| ! | CAAAGTCTTCATTTTCTTCC+TGG | - | tig0025528:36543-36562 | Msa1423330:intron | 35.0% |
| !! | GATCTTGAGTACTGAATATG+TGG | + | tig0025528:36586-36605 | None:intergenic | 35.0% |
| GCTAATATGTCAGATGATCT+GGG | + | tig0025528:36743-36762 | None:intergenic | 35.0% | |
| TGCTAATATGTCAGATGATC+TGG | + | tig0025528:36744-36763 | None:intergenic | 35.0% | |
| AGATCATCTGACATATTAGC+AGG | - | tig0025528:36743-36762 | Msa1423330:intron | 35.0% | |
| TGTATGTGTCTCTGTTTCAT+TGG | - | tig0025528:36822-36841 | Msa1423330:CDS | 35.0% | |
| CAAAAAGGACTCGCATAAAT+TGG | + | tig0025528:36849-36868 | None:intergenic | 35.0% | |
| TCATTTGACGTCTCTTGTAA+TGG | - | tig0025528:36918-36937 | Msa1423330:intron | 35.0% | |
| AACAGGTGAATTCTAATGAG+TGG | - | tig0025528:36993-37012 | Msa1423330:intron | 35.0% | |
| !! | GTCAAAAGTATTGCAACTTG+TGG | - | tig0025528:37048-37067 | Msa1423330:intron | 35.0% |
| AACTTTATCCAGAGATCACA+CGG | + | tig0025528:37189-37208 | None:intergenic | 35.0% | |
| ACCCAAATTAGTTAAGCCTA+GGG | + | tig0025528:37336-37355 | None:intergenic | 35.0% | |
| CTAACATCAGTATGGTTACT+TGG | + | tig0025528:37390-37409 | None:intergenic | 35.0% | |
| TTAGACCTGTTCCTATAGTA+GGG | - | tig0025528:37406-37425 | Msa1423330:intron | 35.0% | |
| AATGTCATACTCCAAAGAAG+TGG | - | tig0025528:37455-37474 | Msa1423330:intron | 35.0% | |
| GATAAGATAACAGTAGTAGC+AGG | - | tig0025528:37627-37646 | Msa1423330:intron | 35.0% | |
| TTCGTGAGAATCACAAAGAT+AGG | + | tig0025528:37780-37799 | None:intergenic | 35.0% | |
| CAGATATATTCCATCTGCAA+AGG | - | tig0025528:37839-37858 | Msa1423330:intron | 35.0% | |
| TTGAAGGTCAGAGAAATAAC+TGG | + | tig0025528:37927-37946 | None:intergenic | 35.0% | |
| TCTTCGTAAGTTAACTGCTT+AGG | + | tig0025528:37991-38010 | None:intergenic | 35.0% | |
| TCTATACTATTGCAGATGTG+GGG | - | tig0025528:38017-38036 | Msa1423330:intron | 35.0% | |
| ! | AATCCTTTATACAGCTTTGG+GGG | + | tig0025528:38061-38080 | None:intergenic | 35.0% |
| CCAAATCCTTTATACAGCTT+TGG | + | tig0025528:38064-38083 | None:intergenic | 35.0% | |
| CCAAAGCTGTATAAAGGATT+TGG | - | tig0025528:38061-38080 | Msa1423330:intron | 35.0% | |
| ACAAAGTTGCTTCTCATTGT+TGG | - | tig0025528:38173-38192 | Msa1423330:intron | 35.0% | |
| TCATTGTTGGATCAGTACTT+TGG | - | tig0025528:38186-38205 | Msa1423330:intron | 35.0% | |
| GTTCCATGTATGATACACTT+AGG | - | tig0025528:38217-38236 | Msa1423330:intron | 35.0% | |
| TGTCCTAAGTGTATCATACA+TGG | + | tig0025528:38223-38242 | None:intergenic | 35.0% | |
| TGAGAACTTCAAAAAGCTTC+TGG | + | tig0025528:38447-38466 | None:intergenic | 35.0% | |
| !!! | GAAGCTTTTTGAAGTTCTCA+TGG | - | tig0025528:38447-38466 | Msa1423330:intron | 35.0% |
| !!! | AGCTTTTTGAAGTTCTCATG+GGG | - | tig0025528:38449-38468 | Msa1423330:intron | 35.0% |
| AAGTCAGATGACCTTTATGT+TGG | - | tig0025528:38496-38515 | Msa1423330:intron | 35.0% | |
| ! | TATTTAGGACTCATTCCATG+TGG | + | tig0025528:38750-38769 | None:intergenic | 35.0% |
| AATAGGATTAAGACCCACTT+TGG | - | tig0025528:38777-38796 | Msa1423330:intron | 35.0% | |
| CATGGAATACAAAGCTTGAT+TGG | - | tig0025528:38818-38837 | Msa1423330:CDS | 35.0% | |
| ! | ACGTCTGTTTTACAGTTTCA+GGG | - | tig0025528:38998-39017 | Msa1423330:intron | 35.0% |
| TATCTGTGTTCGGATTTAGA+AGG | + | tig0025528:39200-39219 | None:intergenic | 35.0% | |
| !! | ATTTTGTTATCCCAGTTCTG+GGG | - | tig0025528:39529-39548 | Msa1423330:intron | 35.0% |
| AAGTTGGAAGCAATTTAGAG+TGG | - | tig0025528:39597-39616 | Msa1423330:intron | 35.0% | |
| CACAAAACAGCAGAAAATGT+AGG | + | tig0025528:39658-39677 | None:intergenic | 35.0% | |
| ATGTGGTACAAAAATTACGG+AGG | + | tig0025528:39726-39745 | None:intergenic | 35.0% | |
| ATGTGGTACAGAATTATCGT+AGG | - | tig0025528:40003-40022 | Msa1423330:intron | 35.0% | |
| ATTAGGATCAATTGACACCA+TGG | + | tig0025528:40081-40100 | None:intergenic | 35.0% | |
| CATAATCATTTAGACCATGG+TGG | - | tig0025528:40388-40407 | Msa1423330:intron | 35.0% | |
| ATCCATTAAAGTTACCGTTG+TGG | - | tig0025528:40416-40435 | Msa1423330:intron | 35.0% | |
| TCCATTAAAGTTACCGTTGT+GGG | - | tig0025528:40417-40436 | Msa1423330:intron | 35.0% | |
| AATGAATAACCATCCCACAA+CGG | + | tig0025528:40433-40452 | None:intergenic | 35.0% | |
| TCCCTTTCCAACACTTATAT+TGG | - | tig0025528:40913-40932 | Msa1423330:intron | 35.0% | |
| !! | GATGTTTTCCTCTTGCTTTT+AGG | - | tig0025528:40991-41010 | Msa1423330:CDS | 35.0% |
| TCTTCATACCTAAAAGCAAG+AGG | + | tig0025528:41002-41021 | None:intergenic | 35.0% | |
| GCTCAAAATAATGCAACTGT+TGG | - | tig0025528:41258-41277 | Msa1423330:intron | 35.0% | |
| TTAACTCGACGATGATTTAG+AGG | - | tig0025528:41343-41362 | Msa1423330:intron | 35.0% | |
| ! | TAGCTGATGGACATAATTGA+AGG | + | tig0025528:41460-41479 | None:intergenic | 35.0% |
| CTCAAATGAATAGTAGCTGA+TGG | + | tig0025528:41473-41492 | None:intergenic | 35.0% | |
| ATGGCAGAGAGAAAAGTTAA+AGG | + | tig0025528:41523-41542 | None:intergenic | 35.0% | |
| GGATAATCTGGTCAATATGA+AGG | + | tig0025528:41603-41622 | None:intergenic | 35.0% | |
| TTAATGAATTGGAAGAGCCA+TGG | - | tig0025528:41753-41772 | Msa1423330:CDS | 35.0% | |
| TACACGGTTGGCAAAAAAAA+AGG | + | tig0025528:41879-41898 | None:intergenic | 35.0% | |
| AAAAACAGAACTTACACGGT+TGG | + | tig0025528:41891-41910 | None:intergenic | 35.0% | |
| !!! | CCGTGTAAGTTCTGTTTTTA+TGG | - | tig0025528:41892-41911 | Msa1423330:CDS | 35.0% |
| AGAAGGATATGCATTGTAAC+TGG | + | tig0025528:42056-42075 | None:intergenic | 35.0% | |
| !! | GCAAGAAAATAGGAAGTACT+TGG | - | tig0025528:42106-42125 | Msa1423330:CDS | 35.0% |
| !! | AAAATAGGAAGTACTTGGCT+TGG | - | tig0025528:42111-42130 | Msa1423330:CDS | 35.0% |
| AATTATCGATCAACAGTGAC+AGG | - | tig0025528:42159-42178 | Msa1423330:CDS | 35.0% | |
| CATTGTTACGAGCAAATTGA+GGG | - | tig0025528:42383-42402 | Msa1423330:CDS | 35.0% | |
| TGTCATTCTAAACAAGGCTT+TGG | + | tig0025528:42501-42520 | None:intergenic | 35.0% | |
| TGTCACTGTCATTCTAAACA+AGG | + | tig0025528:42507-42526 | None:intergenic | 35.0% | |
| !!! | GTTTAGTTTTTCGCATGGTT+TGG | + | tig0025528:34991-35010 | None:intergenic | 35.0% |
| GTTCTCATTTCTTTCGTTCT+AGG | - | tig0025528:35043-35062 | Msa1423330:three_prime_UTR | 35.0% | |
| !!! | TCTTCATCGGTTTCAGTTTT+AGG | - | tig0025528:35188-35207 | Msa1423330:three_prime_UTR | 35.0% |
| !!! | CTTCATCGGTTTCAGTTTTA+GGG | - | tig0025528:35189-35208 | Msa1423330:three_prime_UTR | 35.0% |
| GGGCTTCTAATAATGAACTA+AGG | - | tig0025528:35209-35228 | Msa1423330:exon | 35.0% | |
| !!! | GAAGTCAATGCTGTTGATTT+TGG | - | tig0025528:35427-35446 | Msa1423330:intron | 35.0% |
| GGATGAATTGGTGAAGAATA+TGG | - | tig0025528:35480-35499 | Msa1423330:intron | 35.0% | |
| TATAGTGTTGTGGTGGTAAA+TGG | - | tig0025528:35529-35548 | Msa1423330:intron | 35.0% | |
| ATAGTGTTGTGGTGGTAAAT+GGG | - | tig0025528:35530-35549 | Msa1423330:intron | 35.0% | |
| ! | TTTGGTAAGGTGTTTGTGAA+TGG | - | tig0025528:35649-35668 | Msa1423330:intron | 35.0% |
| AATCATAAACCCAATCCCTT+GGG | + | tig0025528:35765-35784 | None:intergenic | 35.0% | |
| GGGTTTATGATTGGTATGTA+TGG | - | tig0025528:35773-35792 | Msa1423330:intron | 35.0% | |
| !!! | GTTGTAAAAGGTGCTGTTTT+TGG | - | tig0025528:35845-35864 | Msa1423330:intron | 35.0% |
| AATCACATAGACAGTCTCAT+AGG | - | tig0025528:36162-36181 | Msa1423330:intron | 35.0% | |
| ACAATTAAGCCAATCCTATC+AGG | - | tig0025528:36206-36225 | Msa1423330:intron | 35.0% | |
| TATTAAGAGCCTGATAGGAT+TGG | + | tig0025528:36218-36237 | None:intergenic | 35.0% | |
| ! | TAAGTTTGAAGTCTGTGTGA+TGG | - | tig0025528:36317-36336 | Msa1423330:intron | 35.0% |
| ! | AAAATGAAGACTTTGGTGTG+TGG | + | tig0025528:36538-36557 | None:intergenic | 35.0% |
| CAGGAAGAAAATGAAGACTT+TGG | + | tig0025528:36545-36564 | None:intergenic | 35.0% | |
| ! | CAAAGTCTTCATTTTCTTCC+TGG | - | tig0025528:36543-36562 | Msa1423330:intron | 35.0% |
| !! | GATCTTGAGTACTGAATATG+TGG | + | tig0025528:36586-36605 | None:intergenic | 35.0% |
| GCTAATATGTCAGATGATCT+GGG | + | tig0025528:36743-36762 | None:intergenic | 35.0% | |
| TGCTAATATGTCAGATGATC+TGG | + | tig0025528:36744-36763 | None:intergenic | 35.0% | |
| AGATCATCTGACATATTAGC+AGG | - | tig0025528:36743-36762 | Msa1423330:intron | 35.0% | |
| TGTATGTGTCTCTGTTTCAT+TGG | - | tig0025528:36822-36841 | Msa1423330:CDS | 35.0% | |
| CAAAAAGGACTCGCATAAAT+TGG | + | tig0025528:36849-36868 | None:intergenic | 35.0% | |
| TCATTTGACGTCTCTTGTAA+TGG | - | tig0025528:36918-36937 | Msa1423330:intron | 35.0% | |
| AACAGGTGAATTCTAATGAG+TGG | - | tig0025528:36993-37012 | Msa1423330:intron | 35.0% | |
| !! | GTCAAAAGTATTGCAACTTG+TGG | - | tig0025528:37048-37067 | Msa1423330:intron | 35.0% |
| AACTTTATCCAGAGATCACA+CGG | + | tig0025528:37189-37208 | None:intergenic | 35.0% | |
| ACCCAAATTAGTTAAGCCTA+GGG | + | tig0025528:37336-37355 | None:intergenic | 35.0% | |
| CTAACATCAGTATGGTTACT+TGG | + | tig0025528:37390-37409 | None:intergenic | 35.0% | |
| TTAGACCTGTTCCTATAGTA+GGG | - | tig0025528:37406-37425 | Msa1423330:intron | 35.0% | |
| AATGTCATACTCCAAAGAAG+TGG | - | tig0025528:37455-37474 | Msa1423330:intron | 35.0% | |
| GATAAGATAACAGTAGTAGC+AGG | - | tig0025528:37627-37646 | Msa1423330:intron | 35.0% | |
| TTCGTGAGAATCACAAAGAT+AGG | + | tig0025528:37780-37799 | None:intergenic | 35.0% | |
| CAGATATATTCCATCTGCAA+AGG | - | tig0025528:37839-37858 | Msa1423330:intron | 35.0% | |
| TTGAAGGTCAGAGAAATAAC+TGG | + | tig0025528:37927-37946 | None:intergenic | 35.0% | |
| TCTTCGTAAGTTAACTGCTT+AGG | + | tig0025528:37991-38010 | None:intergenic | 35.0% | |
| TCTATACTATTGCAGATGTG+GGG | - | tig0025528:38017-38036 | Msa1423330:intron | 35.0% | |
| ! | AATCCTTTATACAGCTTTGG+GGG | + | tig0025528:38061-38080 | None:intergenic | 35.0% |
| CCAAATCCTTTATACAGCTT+TGG | + | tig0025528:38064-38083 | None:intergenic | 35.0% | |
| CCAAAGCTGTATAAAGGATT+TGG | - | tig0025528:38061-38080 | Msa1423330:intron | 35.0% | |
| ACAAAGTTGCTTCTCATTGT+TGG | - | tig0025528:38173-38192 | Msa1423330:intron | 35.0% | |
| TCATTGTTGGATCAGTACTT+TGG | - | tig0025528:38186-38205 | Msa1423330:intron | 35.0% | |
| GTTCCATGTATGATACACTT+AGG | - | tig0025528:38217-38236 | Msa1423330:intron | 35.0% | |
| TGTCCTAAGTGTATCATACA+TGG | + | tig0025528:38223-38242 | None:intergenic | 35.0% | |
| TGAGAACTTCAAAAAGCTTC+TGG | + | tig0025528:38447-38466 | None:intergenic | 35.0% | |
| !!! | GAAGCTTTTTGAAGTTCTCA+TGG | - | tig0025528:38447-38466 | Msa1423330:intron | 35.0% |
| !!! | AGCTTTTTGAAGTTCTCATG+GGG | - | tig0025528:38449-38468 | Msa1423330:intron | 35.0% |
| AAGTCAGATGACCTTTATGT+TGG | - | tig0025528:38496-38515 | Msa1423330:intron | 35.0% | |
| ! | TATTTAGGACTCATTCCATG+TGG | + | tig0025528:38750-38769 | None:intergenic | 35.0% |
| AATAGGATTAAGACCCACTT+TGG | - | tig0025528:38777-38796 | Msa1423330:intron | 35.0% | |
| CATGGAATACAAAGCTTGAT+TGG | - | tig0025528:38818-38837 | Msa1423330:CDS | 35.0% | |
| ! | ACGTCTGTTTTACAGTTTCA+GGG | - | tig0025528:38998-39017 | Msa1423330:intron | 35.0% |
| TATCTGTGTTCGGATTTAGA+AGG | + | tig0025528:39200-39219 | None:intergenic | 35.0% | |
| !! | ATTTTGTTATCCCAGTTCTG+GGG | - | tig0025528:39529-39548 | Msa1423330:intron | 35.0% |
| AAGTTGGAAGCAATTTAGAG+TGG | - | tig0025528:39597-39616 | Msa1423330:intron | 35.0% | |
| CACAAAACAGCAGAAAATGT+AGG | + | tig0025528:39658-39677 | None:intergenic | 35.0% | |
| ATGTGGTACAAAAATTACGG+AGG | + | tig0025528:39726-39745 | None:intergenic | 35.0% | |
| ATGTGGTACAGAATTATCGT+AGG | - | tig0025528:40003-40022 | Msa1423330:intron | 35.0% | |
| ATTAGGATCAATTGACACCA+TGG | + | tig0025528:40081-40100 | None:intergenic | 35.0% | |
| CATAATCATTTAGACCATGG+TGG | - | tig0025528:40388-40407 | Msa1423330:intron | 35.0% | |
| ATCCATTAAAGTTACCGTTG+TGG | - | tig0025528:40416-40435 | Msa1423330:intron | 35.0% | |
| TCCATTAAAGTTACCGTTGT+GGG | - | tig0025528:40417-40436 | Msa1423330:intron | 35.0% | |
| AATGAATAACCATCCCACAA+CGG | + | tig0025528:40433-40452 | None:intergenic | 35.0% | |
| TCCCTTTCCAACACTTATAT+TGG | - | tig0025528:40913-40932 | Msa1423330:intron | 35.0% | |
| !! | GATGTTTTCCTCTTGCTTTT+AGG | - | tig0025528:40991-41010 | Msa1423330:CDS | 35.0% |
| TCTTCATACCTAAAAGCAAG+AGG | + | tig0025528:41002-41021 | None:intergenic | 35.0% | |
| GCTCAAAATAATGCAACTGT+TGG | - | tig0025528:41258-41277 | Msa1423330:intron | 35.0% | |
| TTAACTCGACGATGATTTAG+AGG | - | tig0025528:41343-41362 | Msa1423330:intron | 35.0% | |
| ! | TAGCTGATGGACATAATTGA+AGG | + | tig0025528:41460-41479 | None:intergenic | 35.0% |
| CTCAAATGAATAGTAGCTGA+TGG | + | tig0025528:41473-41492 | None:intergenic | 35.0% | |
| ATGGCAGAGAGAAAAGTTAA+AGG | + | tig0025528:41523-41542 | None:intergenic | 35.0% | |
| GGATAATCTGGTCAATATGA+AGG | + | tig0025528:41603-41622 | None:intergenic | 35.0% | |
| TTAATGAATTGGAAGAGCCA+TGG | - | tig0025528:41753-41772 | Msa1423330:CDS | 35.0% | |
| TACACGGTTGGCAAAAAAAA+AGG | + | tig0025528:41879-41898 | None:intergenic | 35.0% | |
| AAAAACAGAACTTACACGGT+TGG | + | tig0025528:41891-41910 | None:intergenic | 35.0% | |
| !!! | CCGTGTAAGTTCTGTTTTTA+TGG | - | tig0025528:41892-41911 | Msa1423330:CDS | 35.0% |
| AGAAGGATATGCATTGTAAC+TGG | + | tig0025528:42056-42075 | None:intergenic | 35.0% | |
| !! | GCAAGAAAATAGGAAGTACT+TGG | - | tig0025528:42106-42125 | Msa1423330:CDS | 35.0% |
| !! | AAAATAGGAAGTACTTGGCT+TGG | - | tig0025528:42111-42130 | Msa1423330:CDS | 35.0% |
| AATTATCGATCAACAGTGAC+AGG | - | tig0025528:42159-42178 | Msa1423330:CDS | 35.0% | |
| CATTGTTACGAGCAAATTGA+GGG | - | tig0025528:42383-42402 | Msa1423330:CDS | 35.0% | |
| TGTCATTCTAAACAAGGCTT+TGG | + | tig0025528:42501-42520 | None:intergenic | 35.0% | |
| TGTCACTGTCATTCTAAACA+AGG | + | tig0025528:42507-42526 | None:intergenic | 35.0% | |
| TGAATCGGTTATCGGAGTTT+GGG | + | tig0025528:34951-34970 | None:intergenic | 40.0% | |
| TTGAATCGGTTATCGGAGTT+TGG | + | tig0025528:34952-34971 | None:intergenic | 40.0% | |
| ACCATGCGAAAAACTAAACC+CGG | - | tig0025528:34992-35011 | Msa1423330:three_prime_UTR | 40.0% | |
| ! | TTCTAGGTTTTCCTCTTCTC+TGG | - | tig0025528:35059-35078 | Msa1423330:three_prime_UTR | 40.0% |
| ! | TCAATGGATTTCCAGAGAAG+AGG | + | tig0025528:35073-35092 | None:intergenic | 40.0% |
| !!! | GTCAATGCTGTTGATTTTGG+CGG | - | tig0025528:35430-35449 | Msa1423330:intron | 40.0% |
| !!! | TCAATGCTGTTGATTTTGGC+GGG | - | tig0025528:35431-35450 | Msa1423330:intron | 40.0% |
| !! | TTGATTTTGGCGGGAAATTG+AGG | - | tig0025528:35440-35459 | Msa1423330:intron | 40.0% |
| GAATGTGTATGGAGAAGAGA+AGG | - | tig0025528:35504-35523 | Msa1423330:intron | 40.0% | |
| ! | AGAGAAGGTGTATAGTGTTG+TGG | - | tig0025528:35519-35538 | Msa1423330:intron | 40.0% |
| TAGTGTTGTGGTGGTAAATG+GGG | - | tig0025528:35531-35550 | Msa1423330:intron | 40.0% | |
| ! | GTAAGGTGTTTGTGAATGGT+GGG | - | tig0025528:35653-35672 | Msa1423330:intron | 40.0% |
| TTTGCTTAATGCTGACCCAA+GGG | - | tig0025528:35747-35766 | Msa1423330:intron | 40.0% | |
| CAATCATAAACCCAATCCCT+TGG | + | tig0025528:35766-35785 | None:intergenic | 40.0% | |
| CAAGGGATTGGGTTTATGAT+TGG | - | tig0025528:35764-35783 | Msa1423330:intron | 40.0% | |
| !! | ATAGACACTTCAGCCTTGTT+TGG | - | tig0025528:35986-36005 | Msa1423330:intron | 40.0% |
| AGACTGTCTATGTGATTGCT+TGG | + | tig0025528:36159-36178 | None:intergenic | 40.0% | |
| GTCTTGCAACTTCTACAACT+AGG | + | tig0025528:36455-36474 | None:intergenic | 40.0% | |
| GCAAGACTCATTGTATGCTT+TGG | - | tig0025528:36468-36487 | Msa1423330:intron | 40.0% | |
| AATATGTCAGATGATCTGGG+TGG | + | tig0025528:36740-36759 | None:intergenic | 40.0% | |
| CAGAGACACATACATAACTC+AGG | + | tig0025528:36816-36835 | None:intergenic | 40.0% | |
| TTAGATACTTCAGTTGCAGC+TGG | - | tig0025528:37019-37038 | Msa1423330:intron | 40.0% | |
| GTGTGATCTCTGGATAAAGT+TGG | - | tig0025528:37188-37207 | Msa1423330:intron | 40.0% | |
| TATATAAACTGCAGCACCAC+TGG | - | tig0025528:37211-37230 | Msa1423330:intron | 40.0% | |
| TGGAACCTATGAGGTACATT+GGG | + | tig0025528:37263-37282 | None:intergenic | 40.0% | |
| ATGGAACCTATGAGGTACAT+TGG | + | tig0025528:37264-37283 | None:intergenic | 40.0% | |
| AAAAGGACATGGAACCTATG+AGG | + | tig0025528:37272-37291 | None:intergenic | 40.0% | |
| CGTGATTCTACAAAAGGACA+TGG | + | tig0025528:37283-37302 | None:intergenic | 40.0% | |
| GTAGGACGTGATTCTACAAA+AGG | + | tig0025528:37289-37308 | None:intergenic | 40.0% | |
| TGCCCTAGGCTTAACTAATT+TGG | - | tig0025528:37331-37350 | Msa1423330:intron | 40.0% | |
| GCCCTAGGCTTAACTAATTT+GGG | - | tig0025528:37332-37351 | Msa1423330:intron | 40.0% | |
| GACCCAAATTAGTTAAGCCT+AGG | + | tig0025528:37337-37356 | None:intergenic | 40.0% | |
| GAACAGGTCTAACATCAGTA+TGG | + | tig0025528:37398-37417 | None:intergenic | 40.0% | |
| GTTAGACCTGTTCCTATAGT+AGG | - | tig0025528:37405-37424 | Msa1423330:intron | 40.0% | |
| ATCACAATCAGCATGATCTC+TGG | + | tig0025528:37507-37526 | None:intergenic | 40.0% | |
| AGACAGACACAAACTACAAG+TGG | + | tig0025528:37537-37556 | None:intergenic | 40.0% | |
| !! | GGAGAGATCTCTAAGACTAA+TGG | - | tig0025528:37891-37910 | Msa1423330:intron | 40.0% |
| GGAGAAATCATATGTCTGAC+TGG | + | tig0025528:38098-38117 | None:intergenic | 40.0% | |
| CAGACATATGATTTCTCCTC+AGG | - | tig0025528:38100-38119 | Msa1423330:intron | 40.0% | |
| ACAACTACCACTACTACCTT+AGG | - | tig0025528:38847-38866 | Msa1423330:CDS | 40.0% | |
| TTGACAACCTAAGGTAGTAG+TGG | + | tig0025528:38857-38876 | None:intergenic | 40.0% | |
| ! | GTGCTACTATTGACAACCTA+AGG | + | tig0025528:38866-38885 | None:intergenic | 40.0% |
| GCTACTATTCCGTAACACAT+CGG | + | tig0025528:38912-38931 | None:intergenic | 40.0% | |
| CTGGTTGAACATTATCAGAC+CGG | - | tig0025528:38961-38980 | Msa1423330:intron | 40.0% | |
| AAACTGTAAAACAGACGTGC+GGG | + | tig0025528:38996-39015 | None:intergenic | 40.0% | |
| GAAACTGTAAAACAGACGTG+CGG | + | tig0025528:38997-39016 | None:intergenic | 40.0% | |
| ! | CACGTCTGTTTTACAGTTTC+AGG | - | tig0025528:38997-39016 | Msa1423330:intron | 40.0% |
| CAAAATAATGTGGACAGGGA+TGG | + | tig0025528:39515-39534 | None:intergenic | 40.0% | |
| TTGTCAATCCCAAATAGCTG+CGG | + | tig0025528:39561-39580 | None:intergenic | 40.0% | |
| !! | TTAATGGATTCAACCCACCA+TGG | + | tig0025528:40405-40424 | None:intergenic | 40.0% |
| TCCCACAACGGTAACTTTAA+TGG | + | tig0025528:40421-40440 | None:intergenic | 40.0% | |
| TTAAAGTTACCGTTGTGGGA+TGG | - | tig0025528:40421-40440 | Msa1423330:intron | 40.0% | |
| GCTTGGATCTCTTTCTAGAT+TGG | - | tig0025528:40573-40592 | Msa1423330:intron | 40.0% | |
| AGATTGGTATGCTTATCGAC+TGG | - | tig0025528:40589-40608 | Msa1423330:intron | 40.0% | |
| ! | GATTGGTATGCTTATCGACT+GGG | - | tig0025528:40590-40609 | Msa1423330:intron | 40.0% |
| TGCAGGTACAATCATTACCA+AGG | - | tig0025528:40678-40697 | Msa1423330:intron | 40.0% | |
| ATTGAGAGAAAGTCTCGTAG+AGG | + | tig0025528:40876-40895 | None:intergenic | 40.0% | |
| GGCAGCAAAATATTGAGGAA+AGG | + | tig0025528:41199-41218 | None:intergenic | 40.0% | |
| TCGAAGGCAGCAAAATATTG+AGG | + | tig0025528:41204-41223 | None:intergenic | 40.0% | |
| AAGGCAATCAAGATCTCTTG+CGG | - | tig0025528:41417-41436 | Msa1423330:intron | 40.0% | |
| GCCCATAAAAGATGTCATGA+TGG | - | tig0025528:41777-41796 | Msa1423330:CDS | 40.0% | |
| TGGTACAATTTCAGAGCTAG+AGG | + | tig0025528:41928-41947 | None:intergenic | 40.0% | |
| ! | CGTGAGATGCACAGTTTTTA+AGG | - | tig0025528:41969-41988 | Msa1423330:intron | 40.0% |
| AAAATGGCTGATAGCACACA+AGG | + | tig0025528:42028-42047 | None:intergenic | 40.0% | |
| ATTCTCTTATCGCAGCTAGA+AGG | + | tig0025528:42073-42092 | None:intergenic | 40.0% | |
| ! | TTCTAGCTGCGATAAGAGAA+TGG | - | tig0025528:42072-42091 | Msa1423330:CDS | 40.0% |
| !! | AAATGACAGTAGTGCTGACA+CGG | - | tig0025528:42255-42274 | Msa1423330:CDS | 40.0% |
| ACGTATACTAGTTGTCCCTA+AGG | + | tig0025528:42282-42301 | None:intergenic | 40.0% | |
| TTTCCCTTTCACTTGAAAGG+TGG | - | tig0025528:42354-42373 | Msa1423330:CDS | 40.0% | |
| ! | CAACCACCTTTCAAGTGAAA+GGG | + | tig0025528:42360-42379 | None:intergenic | 40.0% |
| ! | ACAACCACCTTTCAAGTGAA+AGG | + | tig0025528:42361-42380 | None:intergenic | 40.0% |
| ! | CCTCAATTTGCTCGTAACAA+TGG | + | tig0025528:42385-42404 | None:intergenic | 40.0% |
| CCATTGTTACGAGCAAATTG+AGG | - | tig0025528:42382-42401 | Msa1423330:CDS | 40.0% | |
| ! | TAAACAAGGCTTTGGTGAAC+AGG | + | tig0025528:42493-42512 | None:intergenic | 40.0% |
| TGAATCGGTTATCGGAGTTT+GGG | + | tig0025528:34951-34970 | None:intergenic | 40.0% | |
| TTGAATCGGTTATCGGAGTT+TGG | + | tig0025528:34952-34971 | None:intergenic | 40.0% | |
| ACCATGCGAAAAACTAAACC+CGG | - | tig0025528:34992-35011 | Msa1423330:three_prime_UTR | 40.0% | |
| ! | TTCTAGGTTTTCCTCTTCTC+TGG | - | tig0025528:35059-35078 | Msa1423330:three_prime_UTR | 40.0% |
| ! | TCAATGGATTTCCAGAGAAG+AGG | + | tig0025528:35073-35092 | None:intergenic | 40.0% |
| !!! | GTCAATGCTGTTGATTTTGG+CGG | - | tig0025528:35430-35449 | Msa1423330:intron | 40.0% |
| !!! | TCAATGCTGTTGATTTTGGC+GGG | - | tig0025528:35431-35450 | Msa1423330:intron | 40.0% |
| !! | TTGATTTTGGCGGGAAATTG+AGG | - | tig0025528:35440-35459 | Msa1423330:intron | 40.0% |
| GAATGTGTATGGAGAAGAGA+AGG | - | tig0025528:35504-35523 | Msa1423330:intron | 40.0% | |
| ! | AGAGAAGGTGTATAGTGTTG+TGG | - | tig0025528:35519-35538 | Msa1423330:intron | 40.0% |
| TAGTGTTGTGGTGGTAAATG+GGG | - | tig0025528:35531-35550 | Msa1423330:intron | 40.0% | |
| ! | GTAAGGTGTTTGTGAATGGT+GGG | - | tig0025528:35653-35672 | Msa1423330:intron | 40.0% |
| TTTGCTTAATGCTGACCCAA+GGG | - | tig0025528:35747-35766 | Msa1423330:intron | 40.0% | |
| CAATCATAAACCCAATCCCT+TGG | + | tig0025528:35766-35785 | None:intergenic | 40.0% | |
| CAAGGGATTGGGTTTATGAT+TGG | - | tig0025528:35764-35783 | Msa1423330:intron | 40.0% | |
| !! | ATAGACACTTCAGCCTTGTT+TGG | - | tig0025528:35986-36005 | Msa1423330:intron | 40.0% |
| AGACTGTCTATGTGATTGCT+TGG | + | tig0025528:36159-36178 | None:intergenic | 40.0% | |
| GTCTTGCAACTTCTACAACT+AGG | + | tig0025528:36455-36474 | None:intergenic | 40.0% | |
| GCAAGACTCATTGTATGCTT+TGG | - | tig0025528:36468-36487 | Msa1423330:intron | 40.0% | |
| AATATGTCAGATGATCTGGG+TGG | + | tig0025528:36740-36759 | None:intergenic | 40.0% | |
| CAGAGACACATACATAACTC+AGG | + | tig0025528:36816-36835 | None:intergenic | 40.0% | |
| TTAGATACTTCAGTTGCAGC+TGG | - | tig0025528:37019-37038 | Msa1423330:intron | 40.0% | |
| GTGTGATCTCTGGATAAAGT+TGG | - | tig0025528:37188-37207 | Msa1423330:intron | 40.0% | |
| TATATAAACTGCAGCACCAC+TGG | - | tig0025528:37211-37230 | Msa1423330:intron | 40.0% | |
| TGGAACCTATGAGGTACATT+GGG | + | tig0025528:37263-37282 | None:intergenic | 40.0% | |
| ATGGAACCTATGAGGTACAT+TGG | + | tig0025528:37264-37283 | None:intergenic | 40.0% | |
| AAAAGGACATGGAACCTATG+AGG | + | tig0025528:37272-37291 | None:intergenic | 40.0% | |
| CGTGATTCTACAAAAGGACA+TGG | + | tig0025528:37283-37302 | None:intergenic | 40.0% | |
| GTAGGACGTGATTCTACAAA+AGG | + | tig0025528:37289-37308 | None:intergenic | 40.0% | |
| TGCCCTAGGCTTAACTAATT+TGG | - | tig0025528:37331-37350 | Msa1423330:intron | 40.0% | |
| GCCCTAGGCTTAACTAATTT+GGG | - | tig0025528:37332-37351 | Msa1423330:intron | 40.0% | |
| GACCCAAATTAGTTAAGCCT+AGG | + | tig0025528:37337-37356 | None:intergenic | 40.0% | |
| GAACAGGTCTAACATCAGTA+TGG | + | tig0025528:37398-37417 | None:intergenic | 40.0% | |
| GTTAGACCTGTTCCTATAGT+AGG | - | tig0025528:37405-37424 | Msa1423330:intron | 40.0% | |
| ATCACAATCAGCATGATCTC+TGG | + | tig0025528:37507-37526 | None:intergenic | 40.0% | |
| AGACAGACACAAACTACAAG+TGG | + | tig0025528:37537-37556 | None:intergenic | 40.0% | |
| !! | GGAGAGATCTCTAAGACTAA+TGG | - | tig0025528:37891-37910 | Msa1423330:intron | 40.0% |
| GGAGAAATCATATGTCTGAC+TGG | + | tig0025528:38098-38117 | None:intergenic | 40.0% | |
| CAGACATATGATTTCTCCTC+AGG | - | tig0025528:38100-38119 | Msa1423330:intron | 40.0% | |
| ACAACTACCACTACTACCTT+AGG | - | tig0025528:38847-38866 | Msa1423330:CDS | 40.0% | |
| TTGACAACCTAAGGTAGTAG+TGG | + | tig0025528:38857-38876 | None:intergenic | 40.0% | |
| ! | GTGCTACTATTGACAACCTA+AGG | + | tig0025528:38866-38885 | None:intergenic | 40.0% |
| GCTACTATTCCGTAACACAT+CGG | + | tig0025528:38912-38931 | None:intergenic | 40.0% | |
| CTGGTTGAACATTATCAGAC+CGG | - | tig0025528:38961-38980 | Msa1423330:intron | 40.0% | |
| AAACTGTAAAACAGACGTGC+GGG | + | tig0025528:38996-39015 | None:intergenic | 40.0% | |
| GAAACTGTAAAACAGACGTG+CGG | + | tig0025528:38997-39016 | None:intergenic | 40.0% | |
| ! | CACGTCTGTTTTACAGTTTC+AGG | - | tig0025528:38997-39016 | Msa1423330:intron | 40.0% |
| CAAAATAATGTGGACAGGGA+TGG | + | tig0025528:39515-39534 | None:intergenic | 40.0% | |
| TTGTCAATCCCAAATAGCTG+CGG | + | tig0025528:39561-39580 | None:intergenic | 40.0% | |
| !! | TTAATGGATTCAACCCACCA+TGG | + | tig0025528:40405-40424 | None:intergenic | 40.0% |
| TCCCACAACGGTAACTTTAA+TGG | + | tig0025528:40421-40440 | None:intergenic | 40.0% | |
| TTAAAGTTACCGTTGTGGGA+TGG | - | tig0025528:40421-40440 | Msa1423330:intron | 40.0% | |
| GCTTGGATCTCTTTCTAGAT+TGG | - | tig0025528:40573-40592 | Msa1423330:intron | 40.0% | |
| AGATTGGTATGCTTATCGAC+TGG | - | tig0025528:40589-40608 | Msa1423330:intron | 40.0% | |
| ! | GATTGGTATGCTTATCGACT+GGG | - | tig0025528:40590-40609 | Msa1423330:intron | 40.0% |
| TGCAGGTACAATCATTACCA+AGG | - | tig0025528:40678-40697 | Msa1423330:intron | 40.0% | |
| ATTGAGAGAAAGTCTCGTAG+AGG | + | tig0025528:40876-40895 | None:intergenic | 40.0% | |
| GGCAGCAAAATATTGAGGAA+AGG | + | tig0025528:41199-41218 | None:intergenic | 40.0% | |
| TCGAAGGCAGCAAAATATTG+AGG | + | tig0025528:41204-41223 | None:intergenic | 40.0% | |
| AAGGCAATCAAGATCTCTTG+CGG | - | tig0025528:41417-41436 | Msa1423330:intron | 40.0% | |
| GCCCATAAAAGATGTCATGA+TGG | - | tig0025528:41777-41796 | Msa1423330:CDS | 40.0% | |
| TGGTACAATTTCAGAGCTAG+AGG | + | tig0025528:41928-41947 | None:intergenic | 40.0% | |
| ! | CGTGAGATGCACAGTTTTTA+AGG | - | tig0025528:41969-41988 | Msa1423330:intron | 40.0% |
| AAAATGGCTGATAGCACACA+AGG | + | tig0025528:42028-42047 | None:intergenic | 40.0% | |
| ATTCTCTTATCGCAGCTAGA+AGG | + | tig0025528:42073-42092 | None:intergenic | 40.0% | |
| ! | TTCTAGCTGCGATAAGAGAA+TGG | - | tig0025528:42072-42091 | Msa1423330:CDS | 40.0% |
| !! | AAATGACAGTAGTGCTGACA+CGG | - | tig0025528:42255-42274 | Msa1423330:CDS | 40.0% |
| ACGTATACTAGTTGTCCCTA+AGG | + | tig0025528:42282-42301 | None:intergenic | 40.0% | |
| TTTCCCTTTCACTTGAAAGG+TGG | - | tig0025528:42354-42373 | Msa1423330:CDS | 40.0% | |
| ! | CAACCACCTTTCAAGTGAAA+GGG | + | tig0025528:42360-42379 | None:intergenic | 40.0% |
| ! | ACAACCACCTTTCAAGTGAA+AGG | + | tig0025528:42361-42380 | None:intergenic | 40.0% |
| ! | CCTCAATTTGCTCGTAACAA+TGG | + | tig0025528:42385-42404 | None:intergenic | 40.0% |
| CCATTGTTACGAGCAAATTG+AGG | - | tig0025528:42382-42401 | Msa1423330:CDS | 40.0% | |
| ! | TAAACAAGGCTTTGGTGAAC+AGG | + | tig0025528:42493-42512 | None:intergenic | 40.0% |
| ! | TGAATCTGAGATTTCCGCCA+TGG | + | tig0025528:34894-34913 | None:intergenic | 45.0% |
| AATCTCAGATTCACCACCAC+CGG | - | tig0025528:34901-34920 | Msa1423330:three_prime_UTR | 45.0% | |
| AATCGGTTATCGGAGTTTGG+GGG | + | tig0025528:34949-34968 | None:intergenic | 45.0% | |
| GAATCGGTTATCGGAGTTTG+GGG | + | tig0025528:34950-34969 | None:intergenic | 45.0% | |
| ATGAAGAGACGTTTAACGCC+GGG | + | tig0025528:35013-35032 | None:intergenic | 45.0% | |
| GATGAAGAGACGTTTAACGC+CGG | + | tig0025528:35014-35033 | None:intergenic | 45.0% | |
| AGGTGCACGGTAGATTTCAA+TGG | + | tig0025528:35089-35108 | None:intergenic | 45.0% | |
| TAAGGGACTGGATTCGATGT+TGG | + | tig0025528:35143-35162 | None:intergenic | 45.0% | |
| ATTCGCAATGCGGTTGCAAT+GGG | - | tig0025528:35272-35291 | Msa1423330:CDS | 45.0% | |
| ACTCTGTGTCTGTCGTTGAA+AGG | - | tig0025528:35299-35318 | Msa1423330:CDS | 45.0% | |
| ATTGAGGCGAAACGATGAAG+AGG | - | tig0025528:35456-35475 | Msa1423330:intron | 45.0% | |
| ! | GAAGGTGTATAGTGTTGTGG+TGG | - | tig0025528:35522-35541 | Msa1423330:intron | 45.0% |
| ! | GTGGATTGTTGGGAAGGTTT+CGG | - | tig0025528:35594-35613 | Msa1423330:intron | 45.0% |
| !!! | TGTGGCGGAGATTTTTGGTA+AGG | - | tig0025528:35636-35655 | Msa1423330:intron | 45.0% |
| ! | GGTAAGGTGTTTGTGAATGG+TGG | - | tig0025528:35652-35671 | Msa1423330:intron | 45.0% |
| GGAGTGAAGATGGTTCGATT+CGG | - | tig0025528:35674-35693 | Msa1423330:intron | 45.0% | |
| GATTCGGAGTGAGTTTATGC+CGG | - | tig0025528:35690-35709 | Msa1423330:intron | 45.0% | |
| !! | TTTATGCCGGTTGGTTCTGA+TGG | - | tig0025528:35703-35722 | Msa1423330:intron | 45.0% |
| !! | TTATGCCGGTTGGTTCTGAT+GGG | - | tig0025528:35704-35723 | Msa1423330:intron | 45.0% |
| GTTTGCTTAATGCTGACCCA+AGG | - | tig0025528:35746-35765 | Msa1423330:intron | 45.0% | |
| TTAATGCTGACCCAAGGGAT+TGG | - | tig0025528:35752-35771 | Msa1423330:intron | 45.0% | |
| TAATGCTGACCCAAGGGATT+GGG | - | tig0025528:35753-35772 | Msa1423330:intron | 45.0% | |
| CAATGCTTCTGTGTCATGTC+TGG | - | tig0025528:36264-36283 | Msa1423330:intron | 45.0% | |
| GGATGCAAAGCCTCAATAAC+AGG | + | tig0025528:36395-36414 | None:intergenic | 45.0% | |
| ! | TCAACAGTGACATCGGCTAT+AGG | + | tig0025528:36416-36435 | None:intergenic | 45.0% |
| ! | CTGGCTTTCAACAGTGACAT+CGG | + | tig0025528:36423-36442 | None:intergenic | 45.0% |
| TACAACTAGGAGACTTCACC+TGG | + | tig0025528:36442-36461 | None:intergenic | 45.0% | |
| ATACTTCAGTTGCAGCTGGT+GGG | - | tig0025528:37023-37042 | Msa1423330:intron | 45.0% | |
| CTAACAATCCGTGTGATCTC+TGG | - | tig0025528:37178-37197 | Msa1423330:intron | 45.0% | |
| AGTCATGCCATGACATACAC+AGG | + | tig0025528:37238-37257 | None:intergenic | 45.0% | |
| ACTCACCCAATGTACCTCAT+AGG | - | tig0025528:37255-37274 | Msa1423330:intron | 45.0% | |
| ! | CCAGACACAAATGGTGATGT+AGG | + | tig0025528:37307-37326 | None:intergenic | 45.0% |
| CCTACATCACCATTTGTGTC+TGG | - | tig0025528:37304-37323 | Msa1423330:intron | 45.0% | |
| CATGTCCCTACTATAGGAAC+AGG | + | tig0025528:37414-37433 | None:intergenic | 45.0% | |
| CTGTTCCTATAGTAGGGACA+TGG | - | tig0025528:37412-37431 | Msa1423330:intron | 45.0% | |
| AAGCTCCATGTCCCTACTAT+AGG | + | tig0025528:37420-37439 | None:intergenic | 45.0% | |
| AATCTGCAGCACCACTTCTT+TGG | + | tig0025528:37469-37488 | None:intergenic | 45.0% | |
| AGCAGTAGTCTTCCCAATGT+GGG | + | tig0025528:37572-37591 | None:intergenic | 45.0% | |
| AAGCAGTAGTCTTCCCAATG+TGG | + | tig0025528:37573-37592 | None:intergenic | 45.0% | |
| TTGTGATTCTCACGAAGTGC+TGG | - | tig0025528:37784-37803 | Msa1423330:intron | 45.0% | |
| ATACTATTGCAGATGTGGGG+AGG | - | tig0025528:38020-38039 | Msa1423330:intron | 45.0% | |
| GAACCCCCAAAGCTGTATAA+AGG | - | tig0025528:38055-38074 | Msa1423330:intron | 45.0% | |
| AAGTTCTCATGGGGCAGTTA+CGG | - | tig0025528:38458-38477 | Msa1423330:intron | 45.0% | |
| ! | GACCTTTATGTTGGTGAGTC+TGG | - | tig0025528:38505-38524 | Msa1423330:intron | 45.0% |
| TGCCAGACTCACCAACATAA+AGG | + | tig0025528:38510-38529 | None:intergenic | 45.0% | |
| GCGAAAGAGGTTTCACAGAA+TGG | - | tig0025528:38548-38567 | Msa1423330:intron | 45.0% | |
| ! | AGACCCACTTTGGAAACACA+TGG | - | tig0025528:38787-38806 | Msa1423330:intron | 45.0% |
| ! | GACCCACTTTGGAAACACAT+GGG | - | tig0025528:38788-38807 | Msa1423330:intron | 45.0% |
| ! | ACCCACTTTGGAAACACATG+GGG | - | tig0025528:38789-38808 | Msa1423330:intron | 45.0% |
| TCCCCATGTGTTTCCAAAGT+GGG | + | tig0025528:38793-38812 | None:intergenic | 45.0% | |
| TTCCCCATGTGTTTCCAAAG+TGG | + | tig0025528:38794-38813 | None:intergenic | 45.0% | |
| AAACACATGGGGAAGAGTCA+TGG | - | tig0025528:38800-38819 | Msa1423330:intron | 45.0% | |
| AGGTTGTCAATAGTAGCACC+AGG | - | tig0025528:38867-38886 | Msa1423330:CDS | 45.0% | |
| AGGATCACTCCGATGTGTTA+CGG | - | tig0025528:38900-38919 | Msa1423330:CDS | 45.0% | |
| AAATATGCCACGTGACCCAA+CGG | + | tig0025528:39064-39083 | None:intergenic | 45.0% | |
| GGGAATTGGATGTCTTGTCA+AGG | - | tig0025528:40512-40531 | Msa1423330:intron | 45.0% | |
| ! | AGAAAGAGATCCAAGCGTTG+TGG | + | tig0025528:40569-40588 | None:intergenic | 45.0% |
| ! | ATATTTTGCTGCCTTCGAGC+AGG | - | tig0025528:41206-41225 | Msa1423330:intron | 45.0% |
| TGAAAACTTCACCTGCTCGA+AGG | + | tig0025528:41220-41239 | None:intergenic | 45.0% | |
| ! | GCAGGTGAAGTTTTCACTTG+AGG | - | tig0025528:41224-41243 | Msa1423330:intron | 45.0% |
| GGAATGTATGATGCTTCTGC+TGG | - | tig0025528:41279-41298 | Msa1423330:intron | 45.0% | |
| ! | GACATCTTTTATGGGCACCA+TGG | + | tig0025528:41773-41792 | None:intergenic | 45.0% |
| !! | TAGGAAGTACTTGGCTTGGA+AGG | - | tig0025528:42115-42134 | Msa1423330:CDS | 45.0% |
| !! | AGGAAGTACTTGGCTTGGAA+GGG | - | tig0025528:42116-42135 | Msa1423330:CDS | 45.0% |
| ! | ACAGGTTGAAGCTAGTTTCC+AGG | - | tig0025528:42177-42196 | Msa1423330:CDS | 45.0% |
| CGTGCAACAAGACATTGATG+CGG | - | tig0025528:42299-42318 | Msa1423330:CDS | 45.0% | |
| ! | TGAATCTGAGATTTCCGCCA+TGG | + | tig0025528:34894-34913 | None:intergenic | 45.0% |
| AATCTCAGATTCACCACCAC+CGG | - | tig0025528:34901-34920 | Msa1423330:three_prime_UTR | 45.0% | |
| AATCGGTTATCGGAGTTTGG+GGG | + | tig0025528:34949-34968 | None:intergenic | 45.0% | |
| GAATCGGTTATCGGAGTTTG+GGG | + | tig0025528:34950-34969 | None:intergenic | 45.0% | |
| ATGAAGAGACGTTTAACGCC+GGG | + | tig0025528:35013-35032 | None:intergenic | 45.0% | |
| GATGAAGAGACGTTTAACGC+CGG | + | tig0025528:35014-35033 | None:intergenic | 45.0% | |
| AGGTGCACGGTAGATTTCAA+TGG | + | tig0025528:35089-35108 | None:intergenic | 45.0% | |
| TAAGGGACTGGATTCGATGT+TGG | + | tig0025528:35143-35162 | None:intergenic | 45.0% | |
| ATTCGCAATGCGGTTGCAAT+GGG | - | tig0025528:35272-35291 | Msa1423330:CDS | 45.0% | |
| ACTCTGTGTCTGTCGTTGAA+AGG | - | tig0025528:35299-35318 | Msa1423330:CDS | 45.0% | |
| ATTGAGGCGAAACGATGAAG+AGG | - | tig0025528:35456-35475 | Msa1423330:intron | 45.0% | |
| ! | GAAGGTGTATAGTGTTGTGG+TGG | - | tig0025528:35522-35541 | Msa1423330:intron | 45.0% |
| ! | GTGGATTGTTGGGAAGGTTT+CGG | - | tig0025528:35594-35613 | Msa1423330:intron | 45.0% |
| !!! | TGTGGCGGAGATTTTTGGTA+AGG | - | tig0025528:35636-35655 | Msa1423330:intron | 45.0% |
| ! | GGTAAGGTGTTTGTGAATGG+TGG | - | tig0025528:35652-35671 | Msa1423330:intron | 45.0% |
| GGAGTGAAGATGGTTCGATT+CGG | - | tig0025528:35674-35693 | Msa1423330:intron | 45.0% | |
| GATTCGGAGTGAGTTTATGC+CGG | - | tig0025528:35690-35709 | Msa1423330:intron | 45.0% | |
| !! | TTTATGCCGGTTGGTTCTGA+TGG | - | tig0025528:35703-35722 | Msa1423330:intron | 45.0% |
| !! | TTATGCCGGTTGGTTCTGAT+GGG | - | tig0025528:35704-35723 | Msa1423330:intron | 45.0% |
| GTTTGCTTAATGCTGACCCA+AGG | - | tig0025528:35746-35765 | Msa1423330:intron | 45.0% | |
| TTAATGCTGACCCAAGGGAT+TGG | - | tig0025528:35752-35771 | Msa1423330:intron | 45.0% | |
| TAATGCTGACCCAAGGGATT+GGG | - | tig0025528:35753-35772 | Msa1423330:intron | 45.0% | |
| CAATGCTTCTGTGTCATGTC+TGG | - | tig0025528:36264-36283 | Msa1423330:intron | 45.0% | |
| GGATGCAAAGCCTCAATAAC+AGG | + | tig0025528:36395-36414 | None:intergenic | 45.0% | |
| ! | TCAACAGTGACATCGGCTAT+AGG | + | tig0025528:36416-36435 | None:intergenic | 45.0% |
| ! | CTGGCTTTCAACAGTGACAT+CGG | + | tig0025528:36423-36442 | None:intergenic | 45.0% |
| TACAACTAGGAGACTTCACC+TGG | + | tig0025528:36442-36461 | None:intergenic | 45.0% | |
| ATACTTCAGTTGCAGCTGGT+GGG | - | tig0025528:37023-37042 | Msa1423330:intron | 45.0% | |
| CTAACAATCCGTGTGATCTC+TGG | - | tig0025528:37178-37197 | Msa1423330:intron | 45.0% | |
| AGTCATGCCATGACATACAC+AGG | + | tig0025528:37238-37257 | None:intergenic | 45.0% | |
| ACTCACCCAATGTACCTCAT+AGG | - | tig0025528:37255-37274 | Msa1423330:intron | 45.0% | |
| ! | CCAGACACAAATGGTGATGT+AGG | + | tig0025528:37307-37326 | None:intergenic | 45.0% |
| CCTACATCACCATTTGTGTC+TGG | - | tig0025528:37304-37323 | Msa1423330:intron | 45.0% | |
| CATGTCCCTACTATAGGAAC+AGG | + | tig0025528:37414-37433 | None:intergenic | 45.0% | |
| CTGTTCCTATAGTAGGGACA+TGG | - | tig0025528:37412-37431 | Msa1423330:intron | 45.0% | |
| AAGCTCCATGTCCCTACTAT+AGG | + | tig0025528:37420-37439 | None:intergenic | 45.0% | |
| AATCTGCAGCACCACTTCTT+TGG | + | tig0025528:37469-37488 | None:intergenic | 45.0% | |
| AGCAGTAGTCTTCCCAATGT+GGG | + | tig0025528:37572-37591 | None:intergenic | 45.0% | |
| AAGCAGTAGTCTTCCCAATG+TGG | + | tig0025528:37573-37592 | None:intergenic | 45.0% | |
| TTGTGATTCTCACGAAGTGC+TGG | - | tig0025528:37784-37803 | Msa1423330:intron | 45.0% | |
| ATACTATTGCAGATGTGGGG+AGG | - | tig0025528:38020-38039 | Msa1423330:intron | 45.0% | |
| GAACCCCCAAAGCTGTATAA+AGG | - | tig0025528:38055-38074 | Msa1423330:intron | 45.0% | |
| AAGTTCTCATGGGGCAGTTA+CGG | - | tig0025528:38458-38477 | Msa1423330:intron | 45.0% | |
| ! | GACCTTTATGTTGGTGAGTC+TGG | - | tig0025528:38505-38524 | Msa1423330:intron | 45.0% |
| TGCCAGACTCACCAACATAA+AGG | + | tig0025528:38510-38529 | None:intergenic | 45.0% | |
| GCGAAAGAGGTTTCACAGAA+TGG | - | tig0025528:38548-38567 | Msa1423330:intron | 45.0% | |
| ! | AGACCCACTTTGGAAACACA+TGG | - | tig0025528:38787-38806 | Msa1423330:intron | 45.0% |
| ! | GACCCACTTTGGAAACACAT+GGG | - | tig0025528:38788-38807 | Msa1423330:intron | 45.0% |
| ! | ACCCACTTTGGAAACACATG+GGG | - | tig0025528:38789-38808 | Msa1423330:intron | 45.0% |
| TCCCCATGTGTTTCCAAAGT+GGG | + | tig0025528:38793-38812 | None:intergenic | 45.0% | |
| TTCCCCATGTGTTTCCAAAG+TGG | + | tig0025528:38794-38813 | None:intergenic | 45.0% | |
| AAACACATGGGGAAGAGTCA+TGG | - | tig0025528:38800-38819 | Msa1423330:intron | 45.0% | |
| AGGTTGTCAATAGTAGCACC+AGG | - | tig0025528:38867-38886 | Msa1423330:CDS | 45.0% | |
| AGGATCACTCCGATGTGTTA+CGG | - | tig0025528:38900-38919 | Msa1423330:CDS | 45.0% | |
| AAATATGCCACGTGACCCAA+CGG | + | tig0025528:39064-39083 | None:intergenic | 45.0% | |
| GGGAATTGGATGTCTTGTCA+AGG | - | tig0025528:40512-40531 | Msa1423330:intron | 45.0% | |
| ! | AGAAAGAGATCCAAGCGTTG+TGG | + | tig0025528:40569-40588 | None:intergenic | 45.0% |
| ! | ATATTTTGCTGCCTTCGAGC+AGG | - | tig0025528:41206-41225 | Msa1423330:intron | 45.0% |
| TGAAAACTTCACCTGCTCGA+AGG | + | tig0025528:41220-41239 | None:intergenic | 45.0% | |
| ! | GCAGGTGAAGTTTTCACTTG+AGG | - | tig0025528:41224-41243 | Msa1423330:intron | 45.0% |
| GGAATGTATGATGCTTCTGC+TGG | - | tig0025528:41279-41298 | Msa1423330:intron | 45.0% | |
| ! | GACATCTTTTATGGGCACCA+TGG | + | tig0025528:41773-41792 | None:intergenic | 45.0% |
| !! | TAGGAAGTACTTGGCTTGGA+AGG | - | tig0025528:42115-42134 | Msa1423330:CDS | 45.0% |
| !! | AGGAAGTACTTGGCTTGGAA+GGG | - | tig0025528:42116-42135 | Msa1423330:CDS | 45.0% |
| ! | ACAGGTTGAAGCTAGTTTCC+AGG | - | tig0025528:42177-42196 | Msa1423330:CDS | 45.0% |
| CGTGCAACAAGACATTGATG+CGG | - | tig0025528:42299-42318 | Msa1423330:CDS | 45.0% | |
| ! | ATGGAAGCGTGAAGTGATCG+TGG | + | tig0025528:34875-34894 | None:intergenic | 50.0% |
| ACGATCACTTCACGCTTCCA+TGG | - | tig0025528:34874-34893 | Msa1423330:intron | 50.0% | |
| ATCACTTCACGCTTCCATGG+CGG | - | tig0025528:34877-34896 | Msa1423330:intron | 50.0% | |
| !!! | TCGTCGGTGGTTTTTGGTTC+CGG | + | tig0025528:34923-34942 | None:intergenic | 50.0% |
| ! | GGGTTTTCGTCGGTGGTTTT+TGG | + | tig0025528:34929-34948 | None:intergenic | 50.0% |
| !!! | GCCGGGTTTAGTTTTTCGCA+TGG | + | tig0025528:34996-35015 | None:intergenic | 50.0% |
| AAGGATTCGATGCGGTCGAA+AGG | + | tig0025528:35115-35134 | None:intergenic | 50.0% | |
| TGGAGGAGAAGGATTCGATG+CGG | + | tig0025528:35123-35142 | None:intergenic | 50.0% | |
| GGATTCGATGTTGGAGGAGA+AGG | + | tig0025528:35134-35153 | None:intergenic | 50.0% | |
| ACACGGAAAGAGTAAGGGAC+TGG | + | tig0025528:35155-35174 | None:intergenic | 50.0% | |
| GATTCGCAATGCGGTTGCAA+TGG | - | tig0025528:35271-35290 | Msa1423330:CDS | 50.0% | |
| TTCGCAATGCGGTTGCAATG+GGG | - | tig0025528:35273-35292 | Msa1423330:CDS | 50.0% | |
| CGATGAAGAGGCGGATGAAT+TGG | - | tig0025528:35468-35487 | Msa1423330:intron | 50.0% | |
| TGTTGTGGTGGTAAATGGGG+AGG | - | tig0025528:35534-35553 | Msa1423330:intron | 50.0% | |
| AAATGGGGAGGAAGAGGTGA+AGG | - | tig0025528:35546-35565 | Msa1423330:intron | 50.0% | |
| AAGAGGTGAAGGCTGTGGTT+GGG | - | tig0025528:35557-35576 | Msa1423330:intron | 50.0% | |
| ! | TGGTTGGGAAGTACAGGCAT+GGG | - | tig0025528:35572-35591 | Msa1423330:intron | 50.0% |
| !! | TACAGGCATGGGTGGATTGT+TGG | - | tig0025528:35583-35602 | Msa1423330:intron | 50.0% |
| !! | ACAGGCATGGGTGGATTGTT+GGG | - | tig0025528:35584-35603 | Msa1423330:intron | 50.0% |
| GATTGTTGGGAAGGTTTCGG+AGG | - | tig0025528:35597-35616 | Msa1423330:intron | 50.0% | |
| !! | TTGCGTGTGGCGGAGATTTT+TGG | - | tig0025528:35631-35650 | Msa1423330:intron | 50.0% |
| ! | GTGAATGGTGGGAGTGAAGA+TGG | - | tig0025528:35664-35683 | Msa1423330:intron | 50.0% |
| ATCCTCCCATCAGAACCAAC+CGG | + | tig0025528:35712-35731 | None:intergenic | 50.0% | |
| !! | ACACAGAAGCATTGCCAGCA+GGG | + | tig0025528:36258-36277 | None:intergenic | 50.0% |
| CGATGTCACTGTTGAAAGCC+AGG | - | tig0025528:36421-36440 | Msa1423330:intron | 50.0% | |
| GATACTTCAGTTGCAGCTGG+TGG | - | tig0025528:37022-37041 | Msa1423330:intron | 50.0% | |
| CATGACATACACAGGACCAG+TGG | + | tig0025528:37230-37249 | None:intergenic | 50.0% | |
| CACTGGTCCTGTGTATGTCA+TGG | - | tig0025528:37228-37247 | Msa1423330:intron | 50.0% | |
| GTAGGGACATGGAGCTTATG+AGG | - | tig0025528:37423-37442 | Msa1423330:intron | 50.0% | |
| ! | TTGTGCCACTATCCCCACAT+TGG | - | tig0025528:37556-37575 | Msa1423330:intron | 50.0% |
| ! | TGTGCCACTATCCCCACATT+GGG | - | tig0025528:37557-37576 | Msa1423330:intron | 50.0% |
| TCTTCCCAATGTGGGGATAG+TGG | + | tig0025528:37564-37583 | None:intergenic | 50.0% | |
| GCAGTAGTCTTCCCAATGTG+GGG | + | tig0025528:37571-37590 | None:intergenic | 50.0% | |
| AGAGGACACTCCTTTGCAGA+TGG | + | tig0025528:37852-37871 | None:intergenic | 50.0% | |
| ! | TTCGCAAGCTCTAGTTGGAG+AGG | + | tig0025528:37870-37889 | None:intergenic | 50.0% |
| CTCCAACTAGAGCTTGCGAA+TGG | - | tig0025528:37870-37889 | Msa1423330:intron | 50.0% | |
| ! | CTCCATTCGCAAGCTCTAGT+TGG | + | tig0025528:37875-37894 | None:intergenic | 50.0% |
| TCTGGCACATCCATTCTCCT+AGG | - | tig0025528:38523-38542 | Msa1423330:intron | 50.0% | |
| CTGGCACATCCATTCTCCTA+GGG | - | tig0025528:38524-38543 | Msa1423330:intron | 50.0% | |
| TCTTTCGCTCCCTAGGAGAA+TGG | + | tig0025528:38536-38555 | None:intergenic | 50.0% | |
| ATTCTCCTAGGGAGCGAAAG+AGG | - | tig0025528:38535-38554 | Msa1423330:intron | 50.0% | |
| TGAAACCTCTTTCGCTCCCT+AGG | + | tig0025528:38543-38562 | None:intergenic | 50.0% | |
| GTCAATAGTAGCACCAGGAC+AGG | - | tig0025528:38872-38891 | Msa1423330:CDS | 50.0% | |
| TAGCACCAGGACAGGATAAC+AGG | - | tig0025528:38880-38899 | Msa1423330:CDS | 50.0% | |
| GTGATCCTGTTATCCTGTCC+TGG | + | tig0025528:38888-38907 | None:intergenic | 50.0% | |
| ! | AACACAGGTTGAGACACCGT+TGG | - | tig0025528:39045-39064 | Msa1423330:intron | 50.0% |
| ! | ACACAGGTTGAGACACCGTT+GGG | - | tig0025528:39046-39065 | Msa1423330:intron | 50.0% |
| GGTGAACTCCGCAGCTATTT+GGG | - | tig0025528:39550-39569 | Msa1423330:intron | 50.0% | |
| ! | TTGTGGGCTGACTGTGTGTA+GGG | - | tig0025528:40492-40511 | Msa1423330:intron | 50.0% |
| GCTGACTGTGTGTAGGGAAT+TGG | - | tig0025528:40498-40517 | Msa1423330:intron | 50.0% | |
| ! | CAAGCGTTGTGGCACATGAA+AGG | + | tig0025528:40558-40577 | None:intergenic | 50.0% |
| CTTTCATGTGCCACAACGCT+TGG | - | tig0025528:40556-40575 | Msa1423330:intron | 50.0% | |
| GAGAGAAAGTCTCGTAGAGG+TGG | + | tig0025528:40873-40892 | None:intergenic | 50.0% | |
| GCAATCAAGATCTCTTGCGG+AGG | - | tig0025528:41420-41439 | Msa1423330:intron | 50.0% | |
| ! | AGCTAGTTTCCAGGTAGTCG+AGG | - | tig0025528:42186-42205 | Msa1423330:CDS | 50.0% |
| !! | TAGTGCTGACACGGTCCTTA+GGG | - | tig0025528:42264-42283 | Msa1423330:CDS | 50.0% |
| GCAACAAGACATTGATGCGG+CGG | - | tig0025528:42302-42321 | Msa1423330:CDS | 50.0% | |
| ! | ATGGAAGCGTGAAGTGATCG+TGG | + | tig0025528:34875-34894 | None:intergenic | 50.0% |
| ACGATCACTTCACGCTTCCA+TGG | - | tig0025528:34874-34893 | Msa1423330:intron | 50.0% | |
| ATCACTTCACGCTTCCATGG+CGG | - | tig0025528:34877-34896 | Msa1423330:intron | 50.0% | |
| !!! | TCGTCGGTGGTTTTTGGTTC+CGG | + | tig0025528:34923-34942 | None:intergenic | 50.0% |
| ! | GGGTTTTCGTCGGTGGTTTT+TGG | + | tig0025528:34929-34948 | None:intergenic | 50.0% |
| !!! | GCCGGGTTTAGTTTTTCGCA+TGG | + | tig0025528:34996-35015 | None:intergenic | 50.0% |
| AAGGATTCGATGCGGTCGAA+AGG | + | tig0025528:35115-35134 | None:intergenic | 50.0% | |
| TGGAGGAGAAGGATTCGATG+CGG | + | tig0025528:35123-35142 | None:intergenic | 50.0% | |
| GGATTCGATGTTGGAGGAGA+AGG | + | tig0025528:35134-35153 | None:intergenic | 50.0% | |
| ACACGGAAAGAGTAAGGGAC+TGG | + | tig0025528:35155-35174 | None:intergenic | 50.0% | |
| GATTCGCAATGCGGTTGCAA+TGG | - | tig0025528:35271-35290 | Msa1423330:CDS | 50.0% | |
| TTCGCAATGCGGTTGCAATG+GGG | - | tig0025528:35273-35292 | Msa1423330:CDS | 50.0% | |
| CGATGAAGAGGCGGATGAAT+TGG | - | tig0025528:35468-35487 | Msa1423330:intron | 50.0% | |
| TGTTGTGGTGGTAAATGGGG+AGG | - | tig0025528:35534-35553 | Msa1423330:intron | 50.0% | |
| AAATGGGGAGGAAGAGGTGA+AGG | - | tig0025528:35546-35565 | Msa1423330:intron | 50.0% | |
| AAGAGGTGAAGGCTGTGGTT+GGG | - | tig0025528:35557-35576 | Msa1423330:intron | 50.0% | |
| ! | TGGTTGGGAAGTACAGGCAT+GGG | - | tig0025528:35572-35591 | Msa1423330:intron | 50.0% |
| !! | TACAGGCATGGGTGGATTGT+TGG | - | tig0025528:35583-35602 | Msa1423330:intron | 50.0% |
| !! | ACAGGCATGGGTGGATTGTT+GGG | - | tig0025528:35584-35603 | Msa1423330:intron | 50.0% |
| GATTGTTGGGAAGGTTTCGG+AGG | - | tig0025528:35597-35616 | Msa1423330:intron | 50.0% | |
| !! | TTGCGTGTGGCGGAGATTTT+TGG | - | tig0025528:35631-35650 | Msa1423330:intron | 50.0% |
| ! | GTGAATGGTGGGAGTGAAGA+TGG | - | tig0025528:35664-35683 | Msa1423330:intron | 50.0% |
| ATCCTCCCATCAGAACCAAC+CGG | + | tig0025528:35712-35731 | None:intergenic | 50.0% | |
| !! | ACACAGAAGCATTGCCAGCA+GGG | + | tig0025528:36258-36277 | None:intergenic | 50.0% |
| CGATGTCACTGTTGAAAGCC+AGG | - | tig0025528:36421-36440 | Msa1423330:intron | 50.0% | |
| GATACTTCAGTTGCAGCTGG+TGG | - | tig0025528:37022-37041 | Msa1423330:intron | 50.0% | |
| CATGACATACACAGGACCAG+TGG | + | tig0025528:37230-37249 | None:intergenic | 50.0% | |
| CACTGGTCCTGTGTATGTCA+TGG | - | tig0025528:37228-37247 | Msa1423330:intron | 50.0% | |
| GTAGGGACATGGAGCTTATG+AGG | - | tig0025528:37423-37442 | Msa1423330:intron | 50.0% | |
| ! | TTGTGCCACTATCCCCACAT+TGG | - | tig0025528:37556-37575 | Msa1423330:intron | 50.0% |
| ! | TGTGCCACTATCCCCACATT+GGG | - | tig0025528:37557-37576 | Msa1423330:intron | 50.0% |
| TCTTCCCAATGTGGGGATAG+TGG | + | tig0025528:37564-37583 | None:intergenic | 50.0% | |
| GCAGTAGTCTTCCCAATGTG+GGG | + | tig0025528:37571-37590 | None:intergenic | 50.0% | |
| AGAGGACACTCCTTTGCAGA+TGG | + | tig0025528:37852-37871 | None:intergenic | 50.0% | |
| ! | TTCGCAAGCTCTAGTTGGAG+AGG | + | tig0025528:37870-37889 | None:intergenic | 50.0% |
| CTCCAACTAGAGCTTGCGAA+TGG | - | tig0025528:37870-37889 | Msa1423330:intron | 50.0% | |
| ! | CTCCATTCGCAAGCTCTAGT+TGG | + | tig0025528:37875-37894 | None:intergenic | 50.0% |
| TCTGGCACATCCATTCTCCT+AGG | - | tig0025528:38523-38542 | Msa1423330:intron | 50.0% | |
| CTGGCACATCCATTCTCCTA+GGG | - | tig0025528:38524-38543 | Msa1423330:intron | 50.0% | |
| TCTTTCGCTCCCTAGGAGAA+TGG | + | tig0025528:38536-38555 | None:intergenic | 50.0% | |
| ATTCTCCTAGGGAGCGAAAG+AGG | - | tig0025528:38535-38554 | Msa1423330:intron | 50.0% | |
| TGAAACCTCTTTCGCTCCCT+AGG | + | tig0025528:38543-38562 | None:intergenic | 50.0% | |
| GTCAATAGTAGCACCAGGAC+AGG | - | tig0025528:38872-38891 | Msa1423330:CDS | 50.0% | |
| TAGCACCAGGACAGGATAAC+AGG | - | tig0025528:38880-38899 | Msa1423330:CDS | 50.0% | |
| GTGATCCTGTTATCCTGTCC+TGG | + | tig0025528:38888-38907 | None:intergenic | 50.0% | |
| ! | AACACAGGTTGAGACACCGT+TGG | - | tig0025528:39045-39064 | Msa1423330:intron | 50.0% |
| ! | ACACAGGTTGAGACACCGTT+GGG | - | tig0025528:39046-39065 | Msa1423330:intron | 50.0% |
| GGTGAACTCCGCAGCTATTT+GGG | - | tig0025528:39550-39569 | Msa1423330:intron | 50.0% | |
| ! | TTGTGGGCTGACTGTGTGTA+GGG | - | tig0025528:40492-40511 | Msa1423330:intron | 50.0% |
| GCTGACTGTGTGTAGGGAAT+TGG | - | tig0025528:40498-40517 | Msa1423330:intron | 50.0% | |
| ! | CAAGCGTTGTGGCACATGAA+AGG | + | tig0025528:40558-40577 | None:intergenic | 50.0% |
| CTTTCATGTGCCACAACGCT+TGG | - | tig0025528:40556-40575 | Msa1423330:intron | 50.0% | |
| GAGAGAAAGTCTCGTAGAGG+TGG | + | tig0025528:40873-40892 | None:intergenic | 50.0% | |
| GCAATCAAGATCTCTTGCGG+AGG | - | tig0025528:41420-41439 | Msa1423330:intron | 50.0% | |
| ! | AGCTAGTTTCCAGGTAGTCG+AGG | - | tig0025528:42186-42205 | Msa1423330:CDS | 50.0% |
| !! | TAGTGCTGACACGGTCCTTA+GGG | - | tig0025528:42264-42283 | Msa1423330:CDS | 50.0% |
| GCAACAAGACATTGATGCGG+CGG | - | tig0025528:42302-42321 | Msa1423330:CDS | 50.0% | |
| !!! | GTGGTTTTTGGTTCCGGTGG+TGG | + | tig0025528:34917-34936 | None:intergenic | 55.0% |
| !!! | TCGGTGGTTTTTGGTTCCGG+TGG | + | tig0025528:34920-34939 | None:intergenic | 55.0% |
| ! | AGTTTGGGGGTTTTCGTCGG+TGG | + | tig0025528:34936-34955 | None:intergenic | 55.0% |
| ! | CGGAGTTTGGGGGTTTTCGT+CGG | + | tig0025528:34939-34958 | None:intergenic | 55.0% |
| ! | GGTCGAAAGGAAGAGGTGCA+CGG | + | tig0025528:35102-35121 | None:intergenic | 55.0% |
| TCGATGCGGTCGAAAGGAAG+AGG | + | tig0025528:35109-35128 | None:intergenic | 55.0% | |
| GGGACTGGATTCGATGTTGG+AGG | + | tig0025528:35140-35159 | None:intergenic | 55.0% | |
| AACCGCGGTGATTCGCAATG+CGG | - | tig0025528:35262-35281 | Msa1423330:CDS | 55.0% | |
| AACCGCATTGCGAATCACCG+CGG | + | tig0025528:35267-35286 | None:intergenic | 55.0% | |
| GAGGCGAAACGATGAAGAGG+CGG | - | tig0025528:35459-35478 | Msa1423330:intron | 55.0% | |
| GGTGGTAAATGGGGAGGAAG+AGG | - | tig0025528:35540-35559 | Msa1423330:intron | 55.0% | |
| GAAGAGGTGAAGGCTGTGGT+TGG | - | tig0025528:35556-35575 | Msa1423330:intron | 55.0% | |
| ! | AGGCTGTGGTTGGGAAGTAC+AGG | - | tig0025528:35566-35585 | Msa1423330:intron | 55.0% |
| ! | GTGGTTGGGAAGTACAGGCA+TGG | - | tig0025528:35571-35590 | Msa1423330:intron | 55.0% |
| ! | TTGGGAAGTACAGGCATGGG+TGG | - | tig0025528:35575-35594 | Msa1423330:intron | 55.0% |
| !! | GCATGGGTGGATTGTTGGGA+AGG | - | tig0025528:35588-35607 | Msa1423330:intron | 55.0% |
| GAAGGTTTCGGAGGACGAAG+CGG | - | tig0025528:35606-35625 | Msa1423330:intron | 55.0% | |
| CGGAGTGAGTTTATGCCGGT+TGG | - | tig0025528:35694-35713 | Msa1423330:intron | 55.0% | |
| !! | GACACAGAAGCATTGCCAGC+AGG | + | tig0025528:36259-36278 | None:intergenic | 55.0% |
| TCTTCCTGGGATGACGAGCA+TGG | - | tig0025528:36557-36576 | Msa1423330:intron | 55.0% | |
| GGGCAAGCACCAGACACAAA+TGG | + | tig0025528:37316-37335 | None:intergenic | 55.0% | |
| TTGTGTCTGGTGCTTGCCCT+AGG | - | tig0025528:37317-37336 | Msa1423330:intron | 55.0% | |
| !! | TGTGGGGAGGTGTTGTGGTA+TGG | - | tig0025528:38033-38052 | Msa1423330:intron | 55.0% |
| GGGCAGTTACGGCAACTTCT+TGG | - | tig0025528:38469-38488 | Msa1423330:intron | 55.0% | |
| CTTGTCGCCACTGTGAAGCT+AGG | - | tig0025528:38931-38950 | Msa1423330:intron | 55.0% | |
| GCGGGGGAGTTATCTGTGTT+CGG | + | tig0025528:39210-39229 | None:intergenic | 55.0% | |
| TAGCTTCCCACTTTCCCTCG+AGG | + | tig0025528:39232-39251 | None:intergenic | 55.0% | |
| GGGTGAACTCCGCAGCTATT+TGG | - | tig0025528:39549-39568 | Msa1423330:intron | 55.0% | |
| ! | CTTGTGGGCTGACTGTGTGT+AGG | - | tig0025528:40491-40510 | Msa1423330:intron | 55.0% |
| CTCACAAGACCTCGACTACC+TGG | + | tig0025528:42198-42217 | None:intergenic | 55.0% | |
| !! | GTAGTGCTGACACGGTCCTT+AGG | - | tig0025528:42263-42282 | Msa1423330:CDS | 55.0% |
| !!! | GTGGTTTTTGGTTCCGGTGG+TGG | + | tig0025528:34917-34936 | None:intergenic | 55.0% |
| !!! | TCGGTGGTTTTTGGTTCCGG+TGG | + | tig0025528:34920-34939 | None:intergenic | 55.0% |
| ! | AGTTTGGGGGTTTTCGTCGG+TGG | + | tig0025528:34936-34955 | None:intergenic | 55.0% |
| ! | CGGAGTTTGGGGGTTTTCGT+CGG | + | tig0025528:34939-34958 | None:intergenic | 55.0% |
| ! | GGTCGAAAGGAAGAGGTGCA+CGG | + | tig0025528:35102-35121 | None:intergenic | 55.0% |
| TCGATGCGGTCGAAAGGAAG+AGG | + | tig0025528:35109-35128 | None:intergenic | 55.0% | |
| GGGACTGGATTCGATGTTGG+AGG | + | tig0025528:35140-35159 | None:intergenic | 55.0% | |
| AACCGCGGTGATTCGCAATG+CGG | - | tig0025528:35262-35281 | Msa1423330:CDS | 55.0% | |
| AACCGCATTGCGAATCACCG+CGG | + | tig0025528:35267-35286 | None:intergenic | 55.0% | |
| GAGGCGAAACGATGAAGAGG+CGG | - | tig0025528:35459-35478 | Msa1423330:intron | 55.0% | |
| GGTGGTAAATGGGGAGGAAG+AGG | - | tig0025528:35540-35559 | Msa1423330:intron | 55.0% | |
| GAAGAGGTGAAGGCTGTGGT+TGG | - | tig0025528:35556-35575 | Msa1423330:intron | 55.0% | |
| ! | AGGCTGTGGTTGGGAAGTAC+AGG | - | tig0025528:35566-35585 | Msa1423330:intron | 55.0% |
| ! | GTGGTTGGGAAGTACAGGCA+TGG | - | tig0025528:35571-35590 | Msa1423330:intron | 55.0% |
| ! | TTGGGAAGTACAGGCATGGG+TGG | - | tig0025528:35575-35594 | Msa1423330:intron | 55.0% |
| !! | GCATGGGTGGATTGTTGGGA+AGG | - | tig0025528:35588-35607 | Msa1423330:intron | 55.0% |
| GAAGGTTTCGGAGGACGAAG+CGG | - | tig0025528:35606-35625 | Msa1423330:intron | 55.0% | |
| CGGAGTGAGTTTATGCCGGT+TGG | - | tig0025528:35694-35713 | Msa1423330:intron | 55.0% | |
| !! | GACACAGAAGCATTGCCAGC+AGG | + | tig0025528:36259-36278 | None:intergenic | 55.0% |
| TCTTCCTGGGATGACGAGCA+TGG | - | tig0025528:36557-36576 | Msa1423330:intron | 55.0% | |
| GGGCAAGCACCAGACACAAA+TGG | + | tig0025528:37316-37335 | None:intergenic | 55.0% | |
| TTGTGTCTGGTGCTTGCCCT+AGG | - | tig0025528:37317-37336 | Msa1423330:intron | 55.0% | |
| !! | TGTGGGGAGGTGTTGTGGTA+TGG | - | tig0025528:38033-38052 | Msa1423330:intron | 55.0% |
| GGGCAGTTACGGCAACTTCT+TGG | - | tig0025528:38469-38488 | Msa1423330:intron | 55.0% | |
| CTTGTCGCCACTGTGAAGCT+AGG | - | tig0025528:38931-38950 | Msa1423330:intron | 55.0% | |
| GCGGGGGAGTTATCTGTGTT+CGG | + | tig0025528:39210-39229 | None:intergenic | 55.0% | |
| TAGCTTCCCACTTTCCCTCG+AGG | + | tig0025528:39232-39251 | None:intergenic | 55.0% | |
| GGGTGAACTCCGCAGCTATT+TGG | - | tig0025528:39549-39568 | Msa1423330:intron | 55.0% | |
| ! | CTTGTGGGCTGACTGTGTGT+AGG | - | tig0025528:40491-40510 | Msa1423330:intron | 55.0% |
| CTCACAAGACCTCGACTACC+TGG | + | tig0025528:42198-42217 | None:intergenic | 55.0% | |
| !! | GTAGTGCTGACACGGTCCTT+AGG | - | tig0025528:42263-42282 | Msa1423330:CDS | 55.0% |
| GGAGGAAGAGGTGAAGGCTG+TGG | - | tig0025528:35552-35571 | Msa1423330:intron | 60.0% | |
| ! | GGACGAAGCGGTTTTGCGTG+TGG | - | tig0025528:35618-35637 | Msa1423330:intron | 60.0% |
| ! | CGAAGCGGTTTTGCGTGTGG+CGG | - | tig0025528:35621-35640 | Msa1423330:intron | 60.0% |
| !! | TGCCGGTTGGTTCTGATGGG+AGG | - | tig0025528:35707-35726 | Msa1423330:intron | 60.0% |
| CTTCAGTTGCAGCTGGTGGG+AGG | - | tig0025528:37026-37045 | Msa1423330:intron | 60.0% | |
| !! | GCAGATGTGGGGAGGTGTTG+TGG | - | tig0025528:38028-38047 | Msa1423330:intron | 60.0% |
| CGCCACTGTGAAGCTAGGTG+CGG | - | tig0025528:38936-38955 | Msa1423330:intron | 60.0% | |
| GACGTGCGGGTCTCGTATTC+CGG | + | tig0025528:38983-39002 | None:intergenic | 60.0% | |
| TGAGACACCGTTGGGTCACG+TGG | - | tig0025528:39054-39073 | Msa1423330:intron | 60.0% | |
| AGATAACTCCCCCGCCTCGA+GGG | - | tig0025528:39215-39234 | Msa1423330:intron | 60.0% | |
| TTCCCACTTTCCCTCGAGGC+GGG | + | tig0025528:39228-39247 | None:intergenic | 60.0% | |
| CTTCCCACTTTCCCTCGAGG+CGG | + | tig0025528:39229-39248 | None:intergenic | 60.0% | |
| GCGGAGTTCACCCCAGAACT+GGG | + | tig0025528:39542-39561 | None:intergenic | 60.0% | |
| TGCGGAGTTCACCCCAGAAC+TGG | + | tig0025528:39543-39562 | None:intergenic | 60.0% | |
| GACATTGATGCGGCGGCTCT+TGG | - | tig0025528:42309-42328 | Msa1423330:CDS | 60.0% | |
| GGAGGAAGAGGTGAAGGCTG+TGG | - | tig0025528:35552-35571 | Msa1423330:intron | 60.0% | |
| ! | GGACGAAGCGGTTTTGCGTG+TGG | - | tig0025528:35618-35637 | Msa1423330:intron | 60.0% |
| ! | CGAAGCGGTTTTGCGTGTGG+CGG | - | tig0025528:35621-35640 | Msa1423330:intron | 60.0% |
| !! | TGCCGGTTGGTTCTGATGGG+AGG | - | tig0025528:35707-35726 | Msa1423330:intron | 60.0% |
| CTTCAGTTGCAGCTGGTGGG+AGG | - | tig0025528:37026-37045 | Msa1423330:intron | 60.0% | |
| !! | GCAGATGTGGGGAGGTGTTG+TGG | - | tig0025528:38028-38047 | Msa1423330:intron | 60.0% |
| CGCCACTGTGAAGCTAGGTG+CGG | - | tig0025528:38936-38955 | Msa1423330:intron | 60.0% | |
| GACGTGCGGGTCTCGTATTC+CGG | + | tig0025528:38983-39002 | None:intergenic | 60.0% | |
| TGAGACACCGTTGGGTCACG+TGG | - | tig0025528:39054-39073 | Msa1423330:intron | 60.0% | |
| AGATAACTCCCCCGCCTCGA+GGG | - | tig0025528:39215-39234 | Msa1423330:intron | 60.0% | |
| TTCCCACTTTCCCTCGAGGC+GGG | + | tig0025528:39228-39247 | None:intergenic | 60.0% | |
| CTTCCCACTTTCCCTCGAGG+CGG | + | tig0025528:39229-39248 | None:intergenic | 60.0% | |
| GCGGAGTTCACCCCAGAACT+GGG | + | tig0025528:39542-39561 | None:intergenic | 60.0% | |
| TGCGGAGTTCACCCCAGAAC+TGG | + | tig0025528:39543-39562 | None:intergenic | 60.0% | |
| GACATTGATGCGGCGGCTCT+TGG | - | tig0025528:42309-42328 | Msa1423330:CDS | 60.0% | |
| GCTGCCATGCTCGTCATCCC+AGG | + | tig0025528:36564-36583 | None:intergenic | 65.0% | |
| CGCCGCACCTAGCTTCACAG+TGG | + | tig0025528:38941-38960 | None:intergenic | 65.0% | |
| TGTGAAGCTAGGTGCGGCGC+TGG | - | tig0025528:38942-38961 | Msa1423330:intron | 65.0% | |
| CAGATAACTCCCCCGCCTCG+AGG | - | tig0025528:39214-39233 | Msa1423330:intron | 65.0% | |
| TCCCACTTTCCCTCGAGGCG+GGG | + | tig0025528:39227-39246 | None:intergenic | 65.0% | |
| GCTGCCATGCTCGTCATCCC+AGG | + | tig0025528:36564-36583 | None:intergenic | 65.0% | |
| CGCCGCACCTAGCTTCACAG+TGG | + | tig0025528:38941-38960 | None:intergenic | 65.0% | |
| TGTGAAGCTAGGTGCGGCGC+TGG | - | tig0025528:38942-38961 | Msa1423330:intron | 65.0% | |
| CAGATAACTCCCCCGCCTCG+AGG | - | tig0025528:39214-39233 | Msa1423330:intron | 65.0% | |
| TCCCACTTTCCCTCGAGGCG+GGG | + | tig0025528:39227-39246 | None:intergenic | 65.0% | |
| TCCCCCGCCTCGAGGGAAAG+TGG | - | tig0025528:39222-39241 | Msa1423330:intron | 70.0% | |
| CCCACTTTCCCTCGAGGCGG+GGG | + | tig0025528:39226-39245 | None:intergenic | 70.0% | |
| CCCCCGCCTCGAGGGAAAGT+GGG | - | tig0025528:39223-39242 | Msa1423330:intron | 70.0% | |
| TCCCCCGCCTCGAGGGAAAG+TGG | - | tig0025528:39222-39241 | Msa1423330:intron | 70.0% | |
| CCCACTTTCCCTCGAGGCGG+GGG | + | tig0025528:39226-39245 | None:intergenic | 70.0% | |
| CCCCCGCCTCGAGGGAAAGT+GGG | - | tig0025528:39223-39242 | Msa1423330:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025528 | gene | 34842 | 42529 | 34842 | ID=Msa1423330;Name=Msa1423330 |
| tig0025528 | mRNA | 34842 | 42529 | 34842 | ID=Msa1423330-mRNA-1;Parent=Msa1423330;Name=Msa1423330-mRNA-1;_AED=0.18;_eAED=0.18;_QI=51|0.92|0.92|1|0.92|0.85|14|347|600 |
| tig0025528 | exon | 34842 | 34869 | 34842 | ID=Msa1423330-mRNA-1:exon:3185;Parent=Msa1423330-mRNA-1 |
| tig0025528 | exon | 34892 | 35330 | 34892 | ID=Msa1423330-mRNA-1:exon:3184;Parent=Msa1423330-mRNA-1 |
| tig0025528 | exon | 35858 | 35961 | 35858 | ID=Msa1423330-mRNA-1:exon:3183;Parent=Msa1423330-mRNA-1 |
| tig0025528 | exon | 36071 | 36143 | 36071 | ID=Msa1423330-mRNA-1:exon:3182;Parent=Msa1423330-mRNA-1 |
| tig0025528 | exon | 36641 | 36688 | 36641 | ID=Msa1423330-mRNA-1:exon:3181;Parent=Msa1423330-mRNA-1 |
| tig0025528 | exon | 36777 | 36858 | 36777 | ID=Msa1423330-mRNA-1:exon:3180;Parent=Msa1423330-mRNA-1 |
| tig0025528 | exon | 38802 | 38932 | 38802 | ID=Msa1423330-mRNA-1:exon:3179;Parent=Msa1423330-mRNA-1 |
| tig0025528 | exon | 39250 | 39339 | 39250 | ID=Msa1423330-mRNA-1:exon:3178;Parent=Msa1423330-mRNA-1 |
| tig0025528 | exon | 39418 | 39529 | 39418 | ID=Msa1423330-mRNA-1:exon:3177;Parent=Msa1423330-mRNA-1 |
| tig0025528 | exon | 40300 | 40373 | 40300 | ID=Msa1423330-mRNA-1:exon:3176;Parent=Msa1423330-mRNA-1 |
| tig0025528 | exon | 40755 | 40844 | 40755 | ID=Msa1423330-mRNA-1:exon:3175;Parent=Msa1423330-mRNA-1 |
| tig0025528 | exon | 40929 | 41013 | 40929 | ID=Msa1423330-mRNA-1:exon:3174;Parent=Msa1423330-mRNA-1 |
| tig0025528 | exon | 41586 | 41951 | 41586 | ID=Msa1423330-mRNA-1:exon:3173;Parent=Msa1423330-mRNA-1 |
| tig0025528 | exon | 42051 | 42529 | 42051 | ID=Msa1423330-mRNA-1:exon:3172;Parent=Msa1423330-mRNA-1 |
| tig0025528 | five_prime_UTR | 42479 | 42529 | 42479 | ID=Msa1423330-mRNA-1:five_prime_utr;Parent=Msa1423330-mRNA-1 |
| tig0025528 | CDS | 42051 | 42478 | 42051 | ID=Msa1423330-mRNA-1:cds;Parent=Msa1423330-mRNA-1 |
| tig0025528 | CDS | 41586 | 41951 | 41586 | ID=Msa1423330-mRNA-1:cds;Parent=Msa1423330-mRNA-1 |
| tig0025528 | CDS | 40929 | 41013 | 40929 | ID=Msa1423330-mRNA-1:cds;Parent=Msa1423330-mRNA-1 |
| tig0025528 | CDS | 40755 | 40844 | 40755 | ID=Msa1423330-mRNA-1:cds;Parent=Msa1423330-mRNA-1 |
| tig0025528 | CDS | 40300 | 40373 | 40300 | ID=Msa1423330-mRNA-1:cds;Parent=Msa1423330-mRNA-1 |
| tig0025528 | CDS | 39418 | 39529 | 39418 | ID=Msa1423330-mRNA-1:cds;Parent=Msa1423330-mRNA-1 |
| tig0025528 | CDS | 39250 | 39339 | 39250 | ID=Msa1423330-mRNA-1:cds;Parent=Msa1423330-mRNA-1 |
| tig0025528 | CDS | 38802 | 38932 | 38802 | ID=Msa1423330-mRNA-1:cds;Parent=Msa1423330-mRNA-1 |
| tig0025528 | CDS | 36777 | 36858 | 36777 | ID=Msa1423330-mRNA-1:cds;Parent=Msa1423330-mRNA-1 |
| tig0025528 | CDS | 36641 | 36688 | 36641 | ID=Msa1423330-mRNA-1:cds;Parent=Msa1423330-mRNA-1 |
| tig0025528 | CDS | 36071 | 36143 | 36071 | ID=Msa1423330-mRNA-1:cds;Parent=Msa1423330-mRNA-1 |
| tig0025528 | CDS | 35858 | 35961 | 35858 | ID=Msa1423330-mRNA-1:cds;Parent=Msa1423330-mRNA-1 |
| tig0025528 | CDS | 35211 | 35330 | 35211 | ID=Msa1423330-mRNA-1:cds;Parent=Msa1423330-mRNA-1 |
| tig0025528 | three_prime_UTR | 34892 | 35210 | 34892 | ID=Msa1423330-mRNA-1:three_prime_utr;Parent=Msa1423330-mRNA-1 |
| tig0025528 | three_prime_UTR | 34842 | 34869 | 34842 | ID=Msa1423330-mRNA-1:three_prime_utr;Parent=Msa1423330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
