Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445570 | sp|Q3SZL5|PIGS_BOVIN | 27.224 | 562 | 350 | 19 | 50 | 585 | 25 | 553 | 7.00e-39 | 153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445570 | A0A072TZI8 | 95.093 | 591 | 25 | 2 | 1 | 588 | 1 | 590 | 0.0 | 1161 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029630 | Msa1445570 | 0.824361 | 8.414476e-54 | -8.615850e-47 |
| Msa0079920 | Msa1445570 | 0.819195 | 1.319645e-52 | -8.615850e-47 |
| Msa1356610 | Msa1445570 | 0.837666 | 4.543013e-57 | -8.615850e-47 |
| Msa1367590 | Msa1445570 | 0.822776 | 1.977130e-53 | -8.615850e-47 |
| Msa1418340 | Msa1445570 | 0.817653 | 2.948995e-52 | -8.615850e-47 |
| Msa1423330 | Msa1445570 | 0.804570 | 2.027441e-49 | -8.615850e-47 |
| Msa0794970 | Msa1445570 | 0.809090 | 2.246553e-50 | -8.615850e-47 |
| Msa0125450 | Msa1445570 | 0.823724 | 1.187366e-53 | -8.615850e-47 |
| Msa0125540 | Msa1445570 | 0.830648 | 2.608440e-55 | -8.615850e-47 |
| Msa0184040 | Msa1445570 | 0.802709 | 4.933684e-49 | -8.615850e-47 |
| Msa1130980 | Msa1445570 | 0.820713 | 5.931512e-53 | -8.615850e-47 |
| Msa0556060 | Msa1445570 | 0.822301 | 2.549246e-53 | -8.615850e-47 |
| Msa0898040 | Msa1445570 | 0.817735 | 2.825912e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445570 | MtrunA17_Chr7g0235571 | 95.093 | 591 | 25 | 2 | 1 | 588 | 1 | 590 | 0.0 | 1161 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445570 | AT3G07180.1 | 61.525 | 590 | 195 | 9 | 27 | 587 | 13 | 599 | 0.0 | 695 |
| Msa1445570 | AT3G07180.3 | 60.508 | 590 | 193 | 10 | 27 | 587 | 13 | 591 | 0.0 | 675 |
| Msa1445570 | AT3G07180.2 | 55.874 | 349 | 124 | 8 | 27 | 346 | 13 | 360 | 3.06e-119 | 361 |
| Msa1445570 | AT3G07180.2 | 68.041 | 97 | 31 | 0 | 491 | 587 | 358 | 454 | 2.07e-33 | 133 |
Find 174 sgRNAs with CRISPR-Local
Find 564 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTCATTTCTTTCGTTCT+AGG | 0.130408 | tig0031148:+2346 | Msa1445570:CDS |
| TATAGTGTTGTGGTGGTAAA+TGG | 0.185656 | tig0031148:+2832 | Msa1445570:CDS |
| CAAATCCTTTATACAGCTTT+GGG | 0.223453 | tig0031148:-5725 | None:intergenic |
| TGATCTTATTGTAGGGATTT+TGG | 0.238739 | tig0031148:+4017 | Msa1445570:intron |
| CCAAATCCTTTATACAGCTT+TGG | 0.289879 | tig0031148:-5726 | None:intergenic |
| ATGATTATAATGGATGAAAT+TGG | 0.297476 | tig0031148:+8366 | Msa1445570:CDS |
| GAAGTCAATGCTGTTGATTT+TGG | 0.301472 | tig0031148:+2730 | Msa1445570:CDS |
| CCAAAGCTGTATAAAGGATT+TGG | 0.306450 | tig0031148:+5726 | Msa1445570:CDS |
| ATAAAATTAGAAATGGCATT+TGG | 0.318636 | tig0031148:-9895 | None:intergenic |
| GTGGATTGTTGGGAAGGTTT+CGG | 0.320075 | tig0031148:+2897 | Msa1445570:CDS |
| AATGGATGAAATTGGAAAAC+AGG | 0.337157 | tig0031148:+8374 | Msa1445570:CDS |
| CGATGAAGAGGCGGATGAAT+TGG | 0.338228 | tig0031148:+2771 | Msa1445570:CDS |
| AAAGATACAAGCAAGAAAAT+AGG | 0.352639 | tig0031148:+9762 | Msa1445570:CDS |
| GGGCAGTTACGGCAACTTCT+TGG | 0.359643 | tig0031148:+6134 | Msa1445570:CDS |
| CAAGGGATTGGGTTTATGAT+TGG | 0.364134 | tig0031148:+3067 | Msa1445570:CDS |
| ATTACCAAGGATGATTATAA+TGG | 0.365327 | tig0031148:+8356 | Msa1445570:CDS |
| GACCTTTATGTTGGTGAGTC+TGG | 0.368121 | tig0031148:+6170 | Msa1445570:CDS |
| TTTGAAGTTGAATCGGTTAT+CGG | 0.368419 | tig0031148:-2259 | None:intergenic |
| TAAAATTAGAAATGGCATTT+GGG | 0.368826 | tig0031148:-9894 | None:intergenic |
| GCTTGGATCTCTTTCTAGAT+TGG | 0.374672 | tig0031148:+8238 | Msa1445570:CDS |
| GGGCTTCTAATAATGAACTA+AGG | 0.383129 | tig0031148:+2512 | Msa1445570:CDS |
| GGATGCAAAGCCTCAATAAC+AGG | 0.383148 | tig0031148:-4056 | None:intergenic |
| ACAGGTTGAAGCTAGTTTCC+AGG | 0.386519 | tig0031148:+9843 | Msa1445570:three_prime_UTR |
| CTTTCATGTGCCACAACGCT+TGG | 0.397509 | tig0031148:+8221 | Msa1445570:CDS |
| GTAGTGCTGACACGGTCCTT+AGG | 0.401407 | tig0031148:+9929 | Msa1445570:three_prime_UTR |
| ATTCGCAATGCGGTTGCAAT+GGG | 0.402020 | tig0031148:+2575 | Msa1445570:CDS |
| AAGAATATGGTGAATGTGTA+TGG | 0.402517 | tig0031148:+2796 | Msa1445570:CDS |
| TAATGCTGACCCAAGGGATT+GGG | 0.406220 | tig0031148:+3056 | Msa1445570:CDS |
| CAGACATATGATTTCTCCTC+AGG | 0.412813 | tig0031148:+5765 | Msa1445570:CDS |
| TACAGGCATGGGTGGATTGT+TGG | 0.417154 | tig0031148:+2886 | Msa1445570:CDS |
| GCTGACTGTGTGTAGGGAAT+TGG | 0.420206 | tig0031148:+8163 | Msa1445570:intron |
| TTTGGTAAGGTGTTTGTGAA+TGG | 0.424019 | tig0031148:+2952 | Msa1445570:CDS |
| ATTCTCTTATCGCAGCTAGA+AGG | 0.425827 | tig0031148:-9736 | None:intergenic |
| GACATTGATGCGGCGGCTCT+TGG | 0.429053 | tig0031148:+9975 | Msa1445570:three_prime_UTR |
| TATAAAGGATTTGGAAAGTA+AGG | 0.431090 | tig0031148:+5735 | Msa1445570:CDS |
| AAGTTCTCATGGGGCAGTTA+CGG | 0.431363 | tig0031148:+6123 | Msa1445570:CDS |
| ACAGGCATGGGTGGATTGTT+GGG | 0.432435 | tig0031148:+2887 | Msa1445570:CDS |
| AGAAGGATATGCATTGTAAC+TGG | 0.441608 | tig0031148:-9719 | None:intergenic |
| TTTATGCCGGTTGGTTCTGA+TGG | 0.442700 | tig0031148:+3006 | Msa1445570:CDS |
| GTGAATGGTGGGAGTGAAGA+TGG | 0.444296 | tig0031148:+2967 | Msa1445570:CDS |
| TCAACAGTGACATCGGCTAT+AGG | 0.447116 | tig0031148:-4077 | None:intergenic |
| ATAGTGTTGTGGTGGTAAAT+GGG | 0.447632 | tig0031148:+2833 | Msa1445570:CDS |
| GGATGAATTGGTGAAGAATA+TGG | 0.450781 | tig0031148:+2783 | Msa1445570:CDS |
| GAAGAGGTGAAGGCTGTGGT+TGG | 0.451712 | tig0031148:+2859 | Msa1445570:CDS |
| TAGTGCTGACACGGTCCTTA+GGG | 0.455119 | tig0031148:+9930 | Msa1445570:three_prime_UTR |
| TCATCCATTATAATCATCCT+TGG | 0.457874 | tig0031148:-8360 | None:intergenic |
| ATGAACTAAGGGATTCAATT+CGG | 0.460412 | tig0031148:+2524 | Msa1445570:CDS |
| TAGGAAGTACTTGGCTTGGA+AGG | 0.460900 | tig0031148:+9781 | Msa1445570:CDS |
| CTCCATTCGCAAGCTCTAGT+TGG | 0.461662 | tig0031148:-5537 | None:intergenic |
| GGTAAGGTGTTTGTGAATGG+TGG | 0.461816 | tig0031148:+2955 | Msa1445570:CDS |
| AAATTTACACGGAAAGAGTA+AGG | 0.466437 | tig0031148:-2461 | None:intergenic |
| GAATCGGTTATCGGAGTTTG+AGG | 0.467350 | tig0031148:-2250 | None:intergenic |
| CGGAGTGAGTTTATGCCGGT+TGG | 0.469904 | tig0031148:+2997 | Msa1445570:CDS |
| GGATTCGATGTTGGAGGAGA+AGG | 0.474593 | tig0031148:-2434 | None:intergenic |
| CGATGTCACTGTTGAAAGCC+AGG | 0.476162 | tig0031148:+4085 | Msa1445570:CDS |
| AAGAGGTGAAGGCTGTGGTT+GGG | 0.479480 | tig0031148:+2860 | Msa1445570:CDS |
| AGACTTGAAACCTGTTATTG+AGG | 0.481362 | tig0031148:+4046 | Msa1445570:CDS |
| AAATTTCGTGCTATCTTCAT+CGG | 0.483311 | tig0031148:+2478 | Msa1445570:CDS |
| AGGTGCACGGTAGATTTCAA+TGG | 0.484784 | tig0031148:-2389 | None:intergenic |
| CAATCATAAACCCAATCCCT+TGG | 0.486930 | tig0031148:-3066 | None:intergenic |
| TTCTAGCTGCGATAAGAGAA+TGG | 0.489632 | tig0031148:+9738 | Msa1445570:CDS |
| CAACCACCTTTCAAGTGAAA+GGG | 0.490455 | tig0031148:-10023 | None:intergenic |
| GGTGGTAAATGGGGAGGAAG+AGG | 0.491032 | tig0031148:+2843 | Msa1445570:CDS |
| AAAATAGGAAGTACTTGGCT+TGG | 0.491213 | tig0031148:+9777 | Msa1445570:CDS |
| GGAGAGATCTCTAAGACTAA+TGG | 0.491895 | tig0031148:+5556 | Msa1445570:CDS |
| CTCACAAGACCTCGACTACC+TGG | 0.492055 | tig0031148:-9861 | None:intergenic |
| GCTCAAAATAATGCAACTGT+TGG | 0.492447 | tig0031148:+8923 | Msa1445570:CDS |
| TTAATGCTGACCCAAGGGAT+TGG | 0.493164 | tig0031148:+3055 | Msa1445570:CDS |
| TGTGGGGAGGTGTTGTGGTA+TGG | 0.493358 | tig0031148:+5698 | Msa1445570:CDS |
| TCTTTCGCTCCCTAGGAGAA+TGG | 0.497516 | tig0031148:-6198 | None:intergenic |
| TGAAACCTCTTTCGCTCCCT+AGG | 0.497597 | tig0031148:-6205 | None:intergenic |
| TCTGGCACATCCATTCTCCT+AGG | 0.497958 | tig0031148:+6188 | Msa1445570:CDS |
| AGGCTGTGGTTGGGAAGTAC+AGG | 0.498454 | tig0031148:+2869 | Msa1445570:CDS |
| CAGGAAGAAAATGAAGACTT+TGG | 0.498770 | tig0031148:-4206 | None:intergenic |
| AATTATCGATCAACAGTGAC+AGG | 0.499321 | tig0031148:+9825 | Msa1445570:exon |
| TGCCAGACTCACCAACATAA+AGG | 0.499380 | tig0031148:-6172 | None:intergenic |
| GATTCGCAATGCGGTTGCAA+TGG | 0.500467 | tig0031148:+2574 | Msa1445570:CDS |
| GATACTTCAGTTGCAGCTGG+TGG | 0.501022 | tig0031148:+4687 | Msa1445570:CDS |
| AAATGGGGAGGAAGAGGTGA+AGG | 0.504258 | tig0031148:+2849 | Msa1445570:CDS |
| AAGGATTCGATGCGGTCGAA+AGG | 0.506734 | tig0031148:-2415 | None:intergenic |
| GCGAAAGAGGTTTCACAGAA+TGG | 0.508016 | tig0031148:+6213 | Msa1445570:CDS |
| TTAGATACTTCAGTTGCAGC+TGG | 0.514652 | tig0031148:+4684 | Msa1445570:CDS |
| GCAGATGTGGGGAGGTGTTG+TGG | 0.516431 | tig0031148:+5693 | Msa1445570:intron |
| TCAATGGATTTCCAGAGAAG+AGG | 0.520889 | tig0031148:-2373 | None:intergenic |
| TGCCGGTTGGTTCTGATGGG+AGG | 0.522091 | tig0031148:+3010 | Msa1445570:CDS |
| CATTGTTACGAGCAAATTGA+GGG | 0.522170 | tig0031148:+10049 | Msa1445570:three_prime_UTR |
| TTATGCCGGTTGGTTCTGAT+GGG | 0.523477 | tig0031148:+3007 | Msa1445570:CDS |
| GTAAGGTGTTTGTGAATGGT+GGG | 0.525491 | tig0031148:+2956 | Msa1445570:CDS |
| ACAACCACCTTTCAAGTGAA+AGG | 0.527200 | tig0031148:-10024 | None:intergenic |
| ATGAAGAGACGTTTAACGCC+GGG | 0.528765 | tig0031148:-2313 | None:intergenic |
| GCATGGGTGGATTGTTGGGA+AGG | 0.528777 | tig0031148:+2891 | Msa1445570:CDS |
| GGAATGTATGATGCTTCTGC+TGG | 0.530664 | tig0031148:+8944 | Msa1445570:CDS |
| TAGCTGATGGACATAATTGA+AGG | 0.531966 | tig0031148:-9122 | None:intergenic |
| GGCTTCTAATAATGAACTAA+GGG | 0.534042 | tig0031148:+2513 | Msa1445570:CDS |
| CTCAAATGAATAGTAGCTGA+TGG | 0.534091 | tig0031148:-9135 | None:intergenic |
| TTCCCCTTTCACTTGAAAGG+TGG | 0.535543 | tig0031148:+10020 | Msa1445570:three_prime_UTR |
| ATCCTCCCATCAGAACCAAC+CGG | 0.536929 | tig0031148:-3012 | None:intergenic |
| GCAAGAAAATAGGAAGTACT+TGG | 0.537006 | tig0031148:+9772 | Msa1445570:CDS |
| CAAGCGTTGTGGCACATGAA+AGG | 0.543032 | tig0031148:-8220 | None:intergenic |
| CCATTGTTACGAGCAAATTG+AGG | 0.548440 | tig0031148:+10048 | Msa1445570:three_prime_UTR |
| GGAGAAATCATATGTCTGAC+TGG | 0.549427 | tig0031148:-5760 | None:intergenic |
| AATCATAAACCCAATCCCTT+GGG | 0.550520 | tig0031148:-3065 | None:intergenic |
| GGGACTGGATTCGATGTTGG+AGG | 0.552116 | tig0031148:-2440 | None:intergenic |
| GGAGGAAGAGGTGAAGGCTG+TGG | 0.552968 | tig0031148:+2855 | Msa1445570:CDS |
| GATCTTGAGTACTGAATATG+TGG | 0.556061 | tig0031148:-4247 | None:intergenic |
| GTGGTTGGGAAGTACAGGCA+TGG | 0.557066 | tig0031148:+2874 | Msa1445570:CDS |
| TAAGGGACTGGATTCGATGT+TGG | 0.557622 | tig0031148:-2443 | None:intergenic |
| ACGATCACTTCACGCTTCCA+TGG | 0.559044 | tig0031148:+2177 | Msa1445570:exon |
| ATTCTCCTAGGGAGCGAAAG+AGG | 0.562499 | tig0031148:+6200 | Msa1445570:CDS |
| GTTTGCTTAATGCTGACCCA+AGG | 0.562968 | tig0031148:+3049 | Msa1445570:CDS |
| TCGATGCGGTCGAAAGGAAG+AGG | 0.563156 | tig0031148:-2409 | None:intergenic |
| GATTGTTGGGAAGGTTTCGG+AGG | 0.563294 | tig0031148:+2900 | Msa1445570:CDS |
| AATCGGTTATCGGAGTTTGA+GGG | 0.563642 | tig0031148:-2249 | None:intergenic |
| TGGTTGGGAAGTACAGGCAT+GGG | 0.563829 | tig0031148:+2875 | Msa1445570:CDS |
| GGAGTGAAGATGGTTCGATT+CGG | 0.565920 | tig0031148:+2977 | Msa1445570:CDS |
| ACAATAGAACATACAAAGAA+CGG | 0.567002 | tig0031148:-4272 | None:intergenic |
| AGAGAAGGTGTATAGTGTTG+TGG | 0.567287 | tig0031148:+2822 | Msa1445570:CDS |
| ATACTTCAGTTGCAGCTGGT+GGG | 0.567698 | tig0031148:+4688 | Msa1445570:CDS |
| ACACGGAAAGAGTAAGGGAC+TGG | 0.567958 | tig0031148:-2455 | None:intergenic |
| AAGTCAGATGACCTTTATGT+TGG | 0.569066 | tig0031148:+6161 | Msa1445570:CDS |
| AGAGGACACTCCTTTGCAGA+TGG | 0.569090 | tig0031148:-5514 | None:intergenic |
| TTGGGAAGTACAGGCATGGG+TGG | 0.571152 | tig0031148:+2878 | Msa1445570:CDS |
| AATCTCAGATTCACCACCAC+CGG | 0.575796 | tig0031148:+2204 | Msa1445570:CDS |
| TAGTGTTGTGGTGGTAAATG+GGG | 0.577283 | tig0031148:+2834 | Msa1445570:CDS |
| GATTCGGAGTGAGTTTATGC+CGG | 0.577521 | tig0031148:+2993 | Msa1445570:CDS |
| GTCAAAAGTATTGCAACTTG+TGG | 0.578476 | tig0031148:+4713 | Msa1445570:CDS |
| TGTCACTGTCATTCTAAACA+AGG | 0.581077 | tig0031148:-10170 | None:intergenic |
| CTCCAACTAGAGCTTGCGAA+TGG | 0.584338 | tig0031148:+5535 | Msa1445570:CDS |
| AGGAAGTACTTGGCTTGGAA+GGG | 0.584866 | tig0031148:+9782 | Msa1445570:CDS |
| AAATCCTTTATACAGCTTTG+GGG | 0.588176 | tig0031148:-5724 | None:intergenic |
| TTTGCTTAATGCTGACCCAA+GGG | 0.588784 | tig0031148:+3050 | Msa1445570:CDS |
| CAGATATATTCCATCTGCAA+AGG | 0.589184 | tig0031148:+5504 | Msa1445570:intron |
| ACGTATACTAGTTGTCCCTA+AGG | 0.591985 | tig0031148:-9945 | None:intergenic |
| ACTCTGTGTCTGTCGTTGAA+AGG | 0.592026 | tig0031148:+2602 | Msa1445570:CDS |
| AATCCTTTATACAGCTTTGG+GGG | 0.592811 | tig0031148:-5723 | None:intergenic |
| CTGGCACATCCATTCTCCTA+GGG | 0.593812 | tig0031148:+6189 | Msa1445570:CDS |
| CCTCAATTTGCTCGTAACAA+TGG | 0.601661 | tig0031148:-10048 | None:intergenic |
| TCTTCCTGGGATGACGAGCA+TGG | 0.604602 | tig0031148:+4221 | Msa1445570:CDS |
| AGCTAGTTTCCAGGTAGTCG+AGG | 0.606107 | tig0031148:+9852 | Msa1445570:three_prime_UTR |
| TGAATCTGAGATTTCCGCCA+TGG | 0.609618 | tig0031148:-2194 | None:intergenic |
| CTGGCTTTCAACAGTGACAT+CGG | 0.614755 | tig0031148:-4084 | None:intergenic |
| CTTCAGTTGCAGCTGGTGGG+AGG | 0.616847 | tig0031148:+4691 | Msa1445570:CDS |
| AAATGACAGTAGTGCTGACA+CGG | 0.617382 | tig0031148:+9921 | Msa1445570:three_prime_UTR |
| AACCACCTTTCAAGTGAAAG+GGG | 0.617954 | tig0031148:-10022 | None:intergenic |
| TTCGCAAGCTCTAGTTGGAG+AGG | 0.620379 | tig0031148:-5532 | None:intergenic |
| AACAGGTGAATTCTAATGAG+TGG | 0.622364 | tig0031148:+4658 | Msa1445570:intron |
| TGCAGGTACAATCATTACCA+AGG | 0.629331 | tig0031148:+8343 | Msa1445570:intron |
| ATTGAGGCGAAACGATGAAG+AGG | 0.631474 | tig0031148:+2759 | Msa1445570:CDS |
| AAGGCAATCAAGATCTCTTG+CGG | 0.631831 | tig0031148:+9082 | Msa1445570:CDS |
| AACCGCGGTGATTCGCAATG+CGG | 0.633088 | tig0031148:+2565 | Msa1445570:CDS |
| TGTTGTGGTGGTAAATGGGG+AGG | 0.633382 | tig0031148:+2837 | Msa1445570:CDS |
| AGAAAGAGATCCAAGCGTTG+TGG | 0.636450 | tig0031148:-8231 | None:intergenic |
| GGGAATTGGATGTCTTGTCA+AGG | 0.639791 | tig0031148:+8177 | Msa1445570:intron |
| AATTTACACGGAAAGAGTAA+GGG | 0.640749 | tig0031148:-2460 | None:intergenic |
| ATACTATTGCAGATGTGGGG+AGG | 0.641438 | tig0031148:+5685 | Msa1445570:intron |
| ATGGAAGCGTGAAGTGATCG+TGG | 0.643567 | tig0031148:-2175 | None:intergenic |
| GGTCGAAAGGAAGAGGTGCA+CGG | 0.649156 | tig0031148:-2402 | None:intergenic |
| GCAACAAGACATTGATGCGG+CGG | 0.653634 | tig0031148:+9968 | Msa1445570:three_prime_UTR |
| GAAGGTGTATAGTGTTGTGG+TGG | 0.655000 | tig0031148:+2825 | Msa1445570:CDS |
| GAATGTGTATGGAGAAGAGA+AGG | 0.655024 | tig0031148:+2807 | Msa1445570:CDS |
| AAGATAGCACGAAATTTACA+CGG | 0.657796 | tig0031148:-2472 | None:intergenic |
| GAAGGTTTCGGAGGACGAAG+CGG | 0.661130 | tig0031148:+2909 | Msa1445570:CDS |
| GAGGCGAAACGATGAAGAGG+CGG | 0.662028 | tig0031148:+2762 | Msa1445570:CDS |
| GATGAAGAGACGTTTAACGC+CGG | 0.669895 | tig0031148:-2314 | None:intergenic |
| GCAATCAAGATCTCTTGCGG+AGG | 0.670297 | tig0031148:+9085 | Msa1445570:CDS |
| TCTATACTATTGCAGATGTG+GGG | 0.681956 | tig0031148:+5682 | Msa1445570:intron |
| TTCGCAATGCGGTTGCAATG+GGG | 0.684348 | tig0031148:+2576 | Msa1445570:CDS |
| ATCACTTCACGCTTCCATGG+CGG | 0.692187 | tig0031148:+2180 | Msa1445570:exon |
| GTGGTTCTGCAAATTCAGTG+AGG | 0.708056 | tig0031148:-2156 | None:intergenic |
| AAAATGAAGACTTTGGTGTG+TGG | 0.709097 | tig0031148:-4199 | None:intergenic |
| AAAATGATTGAATTTAACCG+CGG | 0.716413 | tig0031148:+2550 | Msa1445570:CDS |
| AACCGCATTGCGAATCACCG+CGG | 0.718123 | tig0031148:-2567 | None:intergenic |
| CGTGCAACAAGACATTGATG+CGG | 0.753447 | tig0031148:+9965 | Msa1445570:three_prime_UTR |
| TGGAGGAGAAGGATTCGATG+CGG | 0.778409 | tig0031148:-2423 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAAATTTATATTAAAACT+GGG | - | tig0031148:3639-3658 | None:intergenic | 10.0% |
| !! | TATGAAATTTATATTAAAAC+TGG | - | tig0031148:3640-3659 | None:intergenic | 10.0% |
| !! | ATATATATTCTTCAAATATT+TGG | + | tig0031148:3898-3917 | Msa1445570:intron | 10.0% |
| !!! | GTACTTATTTTTATTTTTTT+TGG | + | tig0031148:5619-5638 | Msa1445570:intron | 10.0% |
| !! | GATTTACTTTAAATAAATAA+TGG | + | tig0031148:5910-5929 | Msa1445570:intron | 10.0% |
| !!! | AATTATTATTTTTTAAACAC+AGG | + | tig0031148:6695-6714 | Msa1445570:intron | 10.0% |
| !! | AAGATATAAATATAACAATT+CGG | + | tig0031148:6959-6978 | Msa1445570:intron | 10.0% |
| !! | TAATTAAAATATTCAATTAG+CGG | + | tig0031148:7154-7173 | Msa1445570:intron | 10.0% |
| !!! | TTTTTTTTTTAAATGTTGTT+GGG | - | tig0031148:7789-7808 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTAAATGTTGT+TGG | - | tig0031148:7790-7809 | None:intergenic | 10.0% |
| !! | TTTATTGTTATGAATAATAT+AGG | - | tig0031148:7815-7834 | None:intergenic | 10.0% |
| !! | TCTAAAAAAAATTATTATGA+TGG | - | tig0031148:8632-8651 | None:intergenic | 10.0% |
| !!! | TTTTTTTATATCAATTAATC+AGG | - | tig0031148:8797-8816 | None:intergenic | 10.0% |
| !! | AAAATCTTATCAAAATAAAT+AGG | - | tig0031148:9357-9376 | None:intergenic | 10.0% |
| !! | ATTATTAAGTATTAATGAAT+TGG | + | tig0031148:9407-9426 | Msa1445570:intron | 10.0% |
| !!! | ATTTTCAATAAAATTAGAAA+TGG | - | tig0031148:9905-9924 | None:intergenic | 10.0% |
| !!! | TTTGTTTTGTTTCTATTTTT+GGG | + | tig0031148:3126-3145 | Msa1445570:intron | 15.0% |
| !!! | TGTAATTGTAATTTGTAAAT+TGG | + | tig0031148:3186-3205 | Msa1445570:intron | 15.0% |
| !!! | GTAATTGTAATTTGTAAATT+GGG | + | tig0031148:3187-3206 | Msa1445570:intron | 15.0% |
| !!! | TAATTGTAATTTGTAAATTG+GGG | + | tig0031148:3188-3207 | Msa1445570:intron | 15.0% |
| !! | TGAAATTTATATTAAAACTG+GGG | - | tig0031148:3638-3657 | None:intergenic | 15.0% |
| !!! | TCTTGTTTAATTCAAAAAAA+TGG | + | tig0031148:3779-3798 | Msa1445570:intron | 15.0% |
| !! | ATAAGTATAACATAGTTAAA+AGG | - | tig0031148:5482-5501 | None:intergenic | 15.0% |
| !!! | TTTTACTTTTTCTCATTAAT+TGG | + | tig0031148:5788-5807 | Msa1445570:intron | 15.0% |
| !! | ATATGTGAGTATAAAAATAA+TGG | - | tig0031148:6316-6335 | None:intergenic | 15.0% |
| !! | TTGCTAAATATATATCTTTA+AGG | + | tig0031148:6347-6366 | Msa1445570:intron | 15.0% |
| !! | TGCTAAATATATATCTTTAA+GGG | + | tig0031148:6348-6367 | Msa1445570:intron | 15.0% |
| !!! | TATATTTTTTATATTCCACA+TGG | + | tig0031148:6397-6416 | Msa1445570:intron | 15.0% |
| !! | ATCCTATTCTATTATTATTT+AGG | - | tig0031148:6430-6449 | None:intergenic | 15.0% |
| !! | ATACAATAACATTTAATGTA+GGG | + | tig0031148:6801-6820 | Msa1445570:intron | 15.0% |
| !!! | AATTTTGTAATACAATTATG+TGG | + | tig0031148:7651-7670 | Msa1445570:intron | 15.0% |
| !!! | AAATGAAACAATTTTCAATT+AGG | - | tig0031148:7763-7782 | None:intergenic | 15.0% |
| !!! | CTTTGAAAATTATATAGAAT+TGG | + | tig0031148:7844-7863 | Msa1445570:intron | 15.0% |
| !!! | AAAAAACTATTCTTTCATTT+TGG | - | tig0031148:7962-7981 | None:intergenic | 15.0% |
| !!! | TGTTTTAAATGTTTATTGTT+GGG | + | tig0031148:8294-8313 | Msa1445570:intron | 15.0% |
| !!! | ATGATATTCATTTTCTAATT+TGG | + | tig0031148:8697-8716 | Msa1445570:intron | 15.0% |
| !!! | TGATATTCATTTTCTAATTT+GGG | + | tig0031148:8698-8717 | Msa1445570:intron | 15.0% |
| !! | GAATATATTTCTTGTATTTA+TGG | - | tig0031148:9207-9226 | None:intergenic | 15.0% |
| !! | TTATGAATATCAAAATGTAA+TGG | - | tig0031148:9289-9308 | None:intergenic | 15.0% |
| !!! | GTTTGTTTTGTTTCTATTTT+TGG | + | tig0031148:3125-3144 | Msa1445570:intron | 20.0% |
| !! | AAATTTATATTAAAACTGGG+GGG | - | tig0031148:3636-3655 | None:intergenic | 20.0% |
| !! | GAAATTTATATTAAAACTGG+GGG | - | tig0031148:3637-3656 | None:intergenic | 20.0% |
| !! | GCTTAGAATTATAAAAAGAA+GGG | - | tig0031148:3752-3771 | None:intergenic | 20.0% |
| !! | TTAATTCAAAAAAATGGTTC+TGG | + | tig0031148:3785-3804 | Msa1445570:intron | 20.0% |
| !! | TTTCACATATACAACAAAAA+AGG | - | tig0031148:4528-4547 | None:intergenic | 20.0% |
| !! | AAATATGAAAAGGAAAGAAA+AGG | - | tig0031148:4564-4583 | None:intergenic | 20.0% |
| !!! | TCAGTTTATATTTTTAGCAT+CGG | + | tig0031148:4794-4813 | Msa1445570:intron | 20.0% |
| !!! | ATAATGGATATACTTTTGTT+TGG | + | tig0031148:5926-5945 | Msa1445570:intron | 20.0% |
| !! | TGTATAACTGTAGAAATAAA+TGG | - | tig0031148:6015-6034 | None:intergenic | 20.0% |
| !! | TCATATGTTTACACAATAAT+GGG | + | tig0031148:6278-6297 | Msa1445570:intron | 20.0% |
| !! | GCTAAATATATATCTTTAAG+GGG | + | tig0031148:6349-6368 | Msa1445570:intron | 20.0% |
| !! | GTCCTAAATAATAATAGAAT+AGG | + | tig0031148:6425-6444 | Msa1445570:intron | 20.0% |
| !! | GATACAATAACATTTAATGT+AGG | + | tig0031148:6800-6819 | Msa1445570:intron | 20.0% |
| !! | AAAAATCGAATTCTTTAACT+AGG | - | tig0031148:6838-6857 | None:intergenic | 20.0% |
| !! | TTCATGAACTTTGAATTATT+TGG | + | tig0031148:7100-7119 | Msa1445570:intron | 20.0% |
| !! | CATATTTATTACTACTAAGT+TGG | + | tig0031148:7246-7265 | Msa1445570:intron | 20.0% |
| !! | ATTATGTGGTACAAAAATTA+CGG | - | tig0031148:7394-7413 | None:intergenic | 20.0% |
| !!! | GATTTTGTAATACAATTATG+TGG | - | tig0031148:7408-7427 | None:intergenic | 20.0% |
| !!! | TTAATTTTGATGTAACTCAT+TGG | - | tig0031148:7506-7525 | None:intergenic | 20.0% |
| !! | CAACAAAATTTGACATTAAT+TGG | - | tig0031148:7593-7612 | None:intergenic | 20.0% |
| !!! | TTATTTTGTTTTTTCAGCAA+AGG | + | tig0031148:7698-7717 | Msa1445570:intron | 20.0% |
| !! | TTCATGAAGTTATCAAATAA+GGG | - | tig0031148:7880-7899 | None:intergenic | 20.0% |
| !! | ATTCATGAAGTTATCAAATA+AGG | - | tig0031148:7881-7900 | None:intergenic | 20.0% |
| !! | GTTTAAATGATTATGTTTCA+TGG | - | tig0031148:8048-8067 | None:intergenic | 20.0% |
| !! | ACTTCAAAAATAATTCTTGT+GGG | + | tig0031148:8141-8160 | Msa1445570:intron | 20.0% |
| !!! | CTGTTTTAAATGTTTATTGT+TGG | + | tig0031148:8293-8312 | Msa1445570:intron | 20.0% |
| !!! | GTTTTAAATGTTTATTGTTG+GGG | + | tig0031148:8295-8314 | Msa1445570:intron | 20.0% |
| !!! | ATGATTATAATGGATGAAAT+TGG | + | tig0031148:8366-8385 | Msa1445570:CDS | 20.0% |
| !!! | ATTTTAGTTAAGAGTTTGTT+AGG | + | tig0031148:8448-8467 | Msa1445570:intron | 20.0% |
| !!! | GTTACTAATAGTATTGAATA+TGG | + | tig0031148:8603-8622 | Msa1445570:intron | 20.0% |
| !! | AAAAGATAAACATCATAAGT+TGG | - | tig0031148:9047-9066 | None:intergenic | 20.0% |
| !! | TATATTCTTGCTTATATTGA+TGG | + | tig0031148:9220-9239 | Msa1445570:intron | 20.0% |
| !! | TAAAATTAGAAATGGCATTT+GGG | - | tig0031148:9897-9916 | None:intergenic | 20.0% |
| !! | ATAAAATTAGAAATGGCATT+TGG | - | tig0031148:9898-9917 | None:intergenic | 20.0% |
| !!! | ATCGAATTTTGAAGTTGAAT+CGG | - | tig0031148:2269-2288 | None:intergenic | 25.0% |
| ! | AAAATGATTGAATTTAACCG+CGG | + | tig0031148:2550-2569 | Msa1445570:CDS | 25.0% |
| ! | ACAAACAATTGAATGTTGTT+AGG | + | tig0031148:2701-2720 | Msa1445570:intron | 25.0% |
| !! | TATGTATGGATTGTGAAATT+TGG | + | tig0031148:3090-3109 | Msa1445570:intron | 25.0% |
| !!! | TTCTATTTTTGGGTTGTAAA+AGG | + | tig0031148:3136-3155 | Msa1445570:intron | 25.0% |
| ! | AGTTTGCCAAATTTATAGTT+GGG | + | tig0031148:3246-3265 | Msa1445570:intron | 25.0% |
| ! | TCATGTAAGTCTAGATAAAT+AGG | + | tig0031148:3336-3355 | Msa1445570:intron | 25.0% |
| ! | ATTATTATTAAGAGCCTGAT+AGG | - | tig0031148:3526-3545 | None:intergenic | 25.0% |
| ! | AATGCATTTGTGAAATATCA+TGG | - | tig0031148:3667-3686 | None:intergenic | 25.0% |
| ! | CGCTTAGAATTATAAAAAGA+AGG | - | tig0031148:3753-3772 | None:intergenic | 25.0% |
| ! | TTTCAAACATTGTACATTAC+CGG | - | tig0031148:3871-3890 | None:intergenic | 25.0% |
| !!! | ATCTTGAATTTTTTTTCCAG+GGG | - | tig0031148:3926-3945 | None:intergenic | 25.0% |
| !!! | GATCTTGAATTTTTTTTCCA+GGG | - | tig0031148:3927-3946 | None:intergenic | 25.0% |
| ! | ACAATAGAACATACAAAGAA+CGG | - | tig0031148:4275-4294 | None:intergenic | 25.0% |
| !! | TGTTGCAAACTTTTATCAAT+TGG | + | tig0031148:4361-4380 | Msa1445570:intron | 25.0% |
| !! | ACTTTTATCAATTGGATAGT+TGG | + | tig0031148:4369-4388 | Msa1445570:intron | 25.0% |
| ! | ACGTCAAATGAAATATGAAA+AGG | - | tig0031148:4574-4593 | None:intergenic | 25.0% |
| ! | TGAATGTTTAAATCTTGAAC+AGG | + | tig0031148:4641-4660 | Msa1445570:intron | 25.0% |
| ! | AGCATAATCAGAAATTTAGA+TGG | - | tig0031148:5024-5043 | None:intergenic | 25.0% |
| ! | ATCTAAATTTCTGATTATGC+TGG | + | tig0031148:5023-5042 | Msa1445570:intron | 25.0% |
| !!! | TCTAGAATAAATTTTGCTCT+TGG | + | tig0031148:5322-5341 | Msa1445570:intron | 25.0% |
| !! | CTAGAATAAATTTTGCTCTT+GGG | + | tig0031148:5323-5342 | Msa1445570:intron | 25.0% |
| !!! | AATAAGTACAGAAGTTTTGA+AGG | - | tig0031148:5608-5627 | None:intergenic | 25.0% |
| ! | TATAAAGGATTTGGAAAGTA+AGG | + | tig0031148:5735-5754 | Msa1445570:CDS | 25.0% |
| ! | TTAATGACATCAACAATAGA+GGG | - | tig0031148:6044-6063 | None:intergenic | 25.0% |
| ! | ATTAATGACATCAACAATAG+AGG | - | tig0031148:6045-6064 | None:intergenic | 25.0% |
| ! | CATCATGATTTCAAAACTAT+AGG | - | tig0031148:6252-6271 | None:intergenic | 25.0% |
| ! | GTCATATGTTTACACAATAA+TGG | + | tig0031148:6277-6296 | Msa1445570:intron | 25.0% |
| !! | GGCATATTTTTCATTTAACT+CGG | + | tig0031148:6740-6759 | Msa1445570:intron | 25.0% |
| !!! | TCTGTTTTTTCATGAAAGTT+GGG | - | tig0031148:6782-6801 | None:intergenic | 25.0% |
| !!! | ATCTGTTTTTTCATGAAAGT+TGG | - | tig0031148:6783-6802 | None:intergenic | 25.0% |
| ! | AAAGATTTGTGATTATTGAC+GGG | - | tig0031148:6921-6940 | None:intergenic | 25.0% |
| ! | GAAAGATTTGTGATTATTGA+CGG | - | tig0031148:6922-6941 | None:intergenic | 25.0% |
| ! | AGTTATAATTCAAGTCTTAG+AGG | + | tig0031148:6986-7005 | Msa1445570:intron | 25.0% |
| !! | TTTGTTTCCTTGATTTTTGT+TGG | + | tig0031148:7019-7038 | Msa1445570:intron | 25.0% |
| ! | ATAACAAAATAATGTGGACA+GGG | - | tig0031148:7184-7203 | None:intergenic | 25.0% |
| ! | GCAATATATATATATCACCA+TGG | + | tig0031148:7344-7363 | Msa1445570:intron | 25.0% |
| ! | ATTTATTAAGTTTGACACCA+TGG | - | tig0031148:7364-7383 | None:intergenic | 25.0% |
| !!! | GATAATAGCTTTAAATCCAA+AGG | - | tig0031148:7433-7452 | None:intergenic | 25.0% |
| !! | GATAATAGTTTTCAATCCAA+CGG | + | tig0031148:7626-7645 | Msa1445570:intron | 25.0% |
| !!! | TATTGTTTAATTTGACACCA+TGG | + | tig0031148:7726-7745 | Msa1445570:intron | 25.0% |
| !!! | TATCGACAGTTTTATACATT+TGG | - | tig0031148:8005-8024 | None:intergenic | 25.0% |
| ! | ATAATCATTTAAACCATGCT+GGG | + | tig0031148:8054-8073 | Msa1445570:intron | 25.0% |
| ! | CACTTCAAAAATAATTCTTG+TGG | + | tig0031148:8140-8159 | Msa1445570:intron | 25.0% |
| ! | ATTACCAAGGATGATTATAA+TGG | + | tig0031148:8356-8375 | Msa1445570:CDS | 25.0% |
| ! | ATGAATATAACAATTCCGTT+TGG | + | tig0031148:8753-8772 | Msa1445570:intron | 25.0% |
| ! | TCGTTTACTAACTAAATATG+AGG | - | tig0031148:8827-8846 | None:intergenic | 25.0% |
| ! | CATAATTGAAGGATGAAAAA+AGG | - | tig0031148:9114-9133 | None:intergenic | 25.0% |
| !!! | TCAAAATGTAATGGATAATC+TGG | - | tig0031148:9280-9299 | None:intergenic | 25.0% |
| !! | AAATAGGAATTACGTTTTCA+TGG | - | tig0031148:9341-9360 | None:intergenic | 25.0% |
| ! | AGAATAAATACAAGGCTAAA+AGG | - | tig0031148:9486-9505 | None:intergenic | 25.0% |
| ! | ACAACGAAAGAATAAATACA+AGG | - | tig0031148:9494-9513 | None:intergenic | 25.0% |
| !! | TCTGAAATTGTACCAATATT+AGG | + | tig0031148:9599-9618 | Msa1445570:intron | 25.0% |
| ! | AATTCTCATGAACCTAATAT+TGG | - | tig0031148:9614-9633 | None:intergenic | 25.0% |
| ! | AAAGATACAAGCAAGAAAAT+AGG | + | tig0031148:9762-9781 | Msa1445570:CDS | 25.0% |
| ! | TTTGAAGTTGAATCGGTTAT+CGG | - | tig0031148:2262-2281 | None:intergenic | 30.0% |
| !!! | TTTAGTTTTTCGCATGGTTT+GGG | - | tig0031148:2293-2312 | None:intergenic | 30.0% |
| AATTTACACGGAAAGAGTAA+GGG | - | tig0031148:2463-2482 | None:intergenic | 30.0% | |
| AAATTTACACGGAAAGAGTA+AGG | - | tig0031148:2464-2483 | None:intergenic | 30.0% | |
| AAGATAGCACGAAATTTACA+CGG | - | tig0031148:2475-2494 | None:intergenic | 30.0% | |
| AAATTTCGTGCTATCTTCAT+CGG | + | tig0031148:2478-2497 | Msa1445570:CDS | 30.0% | |
| GGCTTCTAATAATGAACTAA+GGG | + | tig0031148:2513-2532 | Msa1445570:CDS | 30.0% | |
| ATGAACTAAGGGATTCAATT+CGG | + | tig0031148:2524-2543 | Msa1445570:CDS | 30.0% | |
| AAGAATATGGTGAATGTGTA+TGG | + | tig0031148:2796-2815 | Msa1445570:CDS | 30.0% | |
| ! | TGTAATTTGTAAATTGGGGT+AGG | + | tig0031148:3192-3211 | Msa1445570:intron | 30.0% |
| GAGTTTGCCAAATTTATAGT+TGG | + | tig0031148:3245-3264 | Msa1445570:intron | 30.0% | |
| CTATCACCCAACTATAAATT+TGG | - | tig0031148:3255-3274 | None:intergenic | 30.0% | |
| ! | TCAAGTTGTTTATCCAAACA+AGG | - | tig0031148:3305-3324 | None:intergenic | 30.0% |
| !! | GCTGTTTTCATAAGCTATTT+TGG | + | tig0031148:3413-3432 | Msa1445570:intron | 30.0% |
| !! | AAGCTATTTTGGATAGCTTA+TGG | + | tig0031148:3424-3443 | Msa1445570:intron | 30.0% |
| !!! | ATTTGTTTTTTAAACCCTGC+TGG | + | tig0031148:3544-3563 | Msa1445570:intron | 30.0% |
| !! | ATTCAAAAAAATGGTTCTGG+TGG | + | tig0031148:3788-3807 | Msa1445570:intron | 30.0% |
| !! | TTCAAAAAAATGGTTCTGGT+GGG | + | tig0031148:3789-3808 | Msa1445570:intron | 30.0% |
| !!! | GGATCTTGAATTTTTTTTCC+AGG | - | tig0031148:3928-3947 | None:intergenic | 30.0% |
| ATGGATGATGATCTTATTGT+AGG | + | tig0031148:4009-4028 | Msa1445570:intron | 30.0% | |
| TGGATGATGATCTTATTGTA+GGG | + | tig0031148:4010-4029 | Msa1445570:intron | 30.0% | |
| ! | TGATCTTATTGTAGGGATTT+TGG | + | tig0031148:4017-4036 | Msa1445570:intron | 30.0% |
| ! | ATTGCTCTTATTTGATTGTC+AGG | + | tig0031148:4169-4188 | Msa1445570:intron | 30.0% |
| ! | AAAGTCTTCATTTTCTTCCT+GGG | + | tig0031148:4208-4227 | Msa1445570:CDS | 30.0% |
| ACATCACAAGATAAGATACA+TGG | - | tig0031148:4344-4363 | None:intergenic | 30.0% | |
| AAAAAAGGACTCGCATAAAT+TGG | - | tig0031148:4513-4532 | None:intergenic | 30.0% | |
| !!! | ACTGCTTAAAGACTAGTTTT+AGG | + | tig0031148:5251-5270 | Msa1445570:intron | 30.0% |
| CATCTGCAATAGTATAGAAT+AGG | - | tig0031148:5680-5699 | None:intergenic | 30.0% | |
| ATTCTATACTATTGCAGATG+TGG | + | tig0031148:5680-5699 | Msa1445570:intron | 30.0% | |
| TTCTATACTATTGCAGATGT+GGG | + | tig0031148:5681-5700 | Msa1445570:intron | 30.0% | |
| AAATCCTTTATACAGCTTTG+GGG | - | tig0031148:5727-5746 | None:intergenic | 30.0% | |
| CAAATCCTTTATACAGCTTT+GGG | - | tig0031148:5728-5747 | None:intergenic | 30.0% | |
| ATGAGAAAAAGTAAAACCTG+AGG | - | tig0031148:5784-5803 | None:intergenic | 30.0% | |
| !! | ATGGATATACTTTTGTTTGG+AGG | + | tig0031148:5929-5948 | Msa1445570:intron | 30.0% |
| TAGCATTCATATACTGAAAC+AGG | + | tig0031148:6082-6101 | Msa1445570:intron | 30.0% | |
| !!! | AAGCTTTTTGAAGTTCTCAT+GGG | + | tig0031148:6113-6132 | Msa1445570:CDS | 30.0% |
| !!! | TAGTTTTGAAATCATGATGC+TGG | + | tig0031148:6253-6272 | Msa1445570:intron | 30.0% |
| ATGGAATACAAAGCTTGATT+GGG | + | tig0031148:6484-6503 | Msa1445570:intron | 30.0% | |
| TCATGAAAGTTGGGATAAAA+AGG | - | tig0031148:6773-6792 | None:intergenic | 30.0% | |
| AAGATTTGTGATTATTGACG+GGG | - | tig0031148:6920-6939 | None:intergenic | 30.0% | |
| GTAAGTACCAACAAAAATCA+AGG | - | tig0031148:7029-7048 | None:intergenic | 30.0% | |
| GATAACAAAATAATGTGGAC+AGG | - | tig0031148:7185-7204 | None:intergenic | 30.0% | |
| ACTGGGATAACAAAATAATG+TGG | - | tig0031148:7190-7209 | None:intergenic | 30.0% | |
| !! | TTATTTTGTTATCCCAGTTC+TGG | + | tig0031148:7192-7211 | Msa1445570:intron | 30.0% |
| !! | TATTTTGTTATCCCAGTTCT+GGG | + | tig0031148:7193-7212 | Msa1445570:intron | 30.0% |
| TGTATTACAAAATCCACCTT+TGG | + | tig0031148:7414-7433 | Msa1445570:intron | 30.0% | |
| !! | AATAGCTTTAAATCCAAAGG+TGG | - | tig0031148:7430-7449 | None:intergenic | 30.0% |
| TGTATTACAAAATTCACCGT+TGG | - | tig0031148:7645-7664 | None:intergenic | 30.0% | |
| CATAATCATTTAAACCATGC+TGG | + | tig0031148:8053-8072 | Msa1445570:intron | 30.0% | |
| ! | GTTTAACTCTTATTTCTTGC+AGG | + | tig0031148:8326-8345 | Msa1445570:intron | 30.0% |
| TCATCCATTATAATCATCCT+TGG | - | tig0031148:8363-8382 | None:intergenic | 30.0% | |
| AATGGATGAAATTGGAAAAC+AGG | + | tig0031148:8374-8393 | Msa1445570:CDS | 30.0% | |
| AGGAATTAGTTAGTTGCATA+TGG | + | tig0031148:8468-8487 | Msa1445570:intron | 30.0% | |
| !! | TCCAATATAAGTGTTGGAAA+GGG | - | tig0031148:8582-8601 | None:intergenic | 30.0% |
| !! | ATCCAATATAAGTGTTGGAA+AGG | - | tig0031148:8583-8602 | None:intergenic | 30.0% |
| GTAACATCCAATATAAGTGT+TGG | - | tig0031148:8588-8607 | None:intergenic | 30.0% | |
| ATGTAATTGTACACACCAAA+CGG | - | tig0031148:8771-8790 | None:intergenic | 30.0% | |
| TTAGCGATAAGTCTCAAAAA+AGG | - | tig0031148:8974-8993 | None:intergenic | 30.0% | |
| ! | TTTTCTTGTCAGTATCATCA+AGG | + | tig0031148:9063-9082 | Msa1445570:intron | 30.0% |
| !! | GCATTGTTTTGCTATCTATT+CGG | + | tig0031148:9157-9176 | Msa1445570:CDS | 30.0% |
| ! | TCCATCATGACATCTTTTAT+GGG | - | tig0031148:9446-9465 | None:intergenic | 30.0% |
| ! | TTCCATCATGACATCTTTTA+TGG | - | tig0031148:9447-9466 | None:intergenic | 30.0% |
| ! | AAGATGTCATGATGGAAAAT+TGG | + | tig0031148:9450-9469 | Msa1445570:intron | 30.0% |
| CCATAAAAACAGAACTTACA+CGG | - | tig0031148:9561-9580 | None:intergenic | 30.0% | |
| !!! | GTTCTGTTTTTATGGACTTA+CGG | + | tig0031148:9566-9585 | Msa1445570:intron | 30.0% |
| ATTGTAACTGGCAGAAAAAA+TGG | - | tig0031148:9710-9729 | None:intergenic | 30.0% | |
| !!! | GTTTAGTTTTTCGCATGGTT+TGG | - | tig0031148:2294-2313 | None:intergenic | 35.0% |
| GTTCTCATTTCTTTCGTTCT+AGG | + | tig0031148:2346-2365 | Msa1445570:CDS | 35.0% | |
| !!! | TCTTCATCGGTTTCAGTTTT+AGG | + | tig0031148:2491-2510 | Msa1445570:CDS | 35.0% |
| !!! | CTTCATCGGTTTCAGTTTTA+GGG | + | tig0031148:2492-2511 | Msa1445570:CDS | 35.0% |
| GGGCTTCTAATAATGAACTA+AGG | + | tig0031148:2512-2531 | Msa1445570:CDS | 35.0% | |
| !!! | GAAGTCAATGCTGTTGATTT+TGG | + | tig0031148:2730-2749 | Msa1445570:CDS | 35.0% |
| GGATGAATTGGTGAAGAATA+TGG | + | tig0031148:2783-2802 | Msa1445570:CDS | 35.0% | |
| TATAGTGTTGTGGTGGTAAA+TGG | + | tig0031148:2832-2851 | Msa1445570:CDS | 35.0% | |
| ATAGTGTTGTGGTGGTAAAT+GGG | + | tig0031148:2833-2852 | Msa1445570:CDS | 35.0% | |
| ! | TTTGGTAAGGTGTTTGTGAA+TGG | + | tig0031148:2952-2971 | Msa1445570:CDS | 35.0% |
| AATCATAAACCCAATCCCTT+GGG | - | tig0031148:3068-3087 | None:intergenic | 35.0% | |
| GGGTTTATGATTGGTATGTA+TGG | + | tig0031148:3076-3095 | Msa1445570:intron | 35.0% | |
| !!! | GTTGTAAAAGGTGCTGTTTT+TGG | + | tig0031148:3148-3167 | Msa1445570:intron | 35.0% |
| !! | ATAGACACTTAAGCCTTGTT+TGG | + | tig0031148:3289-3308 | Msa1445570:intron | 35.0% |
| AATCACATAGACAGTCTCAT+AGG | + | tig0031148:3465-3484 | Msa1445570:intron | 35.0% | |
| ACAATTAAGCCAATCCTATC+AGG | + | tig0031148:3509-3528 | Msa1445570:intron | 35.0% | |
| TATTAAGAGCCTGATAGGAT+TGG | - | tig0031148:3521-3540 | None:intergenic | 35.0% | |
| !! | TTATAAAAAGAAGGGCACCA+GGG | - | tig0031148:3744-3763 | None:intergenic | 35.0% |
| !! | ATTATAAAAAGAAGGGCACC+AGG | - | tig0031148:3745-3764 | None:intergenic | 35.0% |
| TACATTACCGGAAATAGTTG+TGG | - | tig0031148:3859-3878 | None:intergenic | 35.0% | |
| ! | TAAGTTTGAAGTCTGTGTGA+TGG | + | tig0031148:3990-4009 | Msa1445570:intron | 35.0% |
| AGACTTGAAACCTGTTATTG+AGG | + | tig0031148:4046-4065 | Msa1445570:CDS | 35.0% | |
| GTCTTGCAACTTCTACAATT+AGG | - | tig0031148:4119-4138 | None:intergenic | 35.0% | |
| ! | AAAATGAAGACTTTGGTGTG+TGG | - | tig0031148:4202-4221 | None:intergenic | 35.0% |
| CAGGAAGAAAATGAAGACTT+TGG | - | tig0031148:4209-4228 | None:intergenic | 35.0% | |
| ! | CAAAGTCTTCATTTTCTTCC+TGG | + | tig0031148:4207-4226 | Msa1445570:CDS | 35.0% |
| !! | GATCTTGAGTACTGAATATG+TGG | - | tig0031148:4250-4269 | None:intergenic | 35.0% |
| GCTAATATGTCAGATGATCT+GGG | - | tig0031148:4407-4426 | None:intergenic | 35.0% | |
| TGCTAATATGTCAGATGATC+TGG | - | tig0031148:4408-4427 | None:intergenic | 35.0% | |
| AGATCATCTGACATATTAGC+AGG | + | tig0031148:4407-4426 | Msa1445570:intron | 35.0% | |
| TGTATGTGTCTCTGTTTCAT+TGG | + | tig0031148:4486-4505 | Msa1445570:intron | 35.0% | |
| TCATTTGACGTCTCTTGTAA+TGG | + | tig0031148:4583-4602 | Msa1445570:intron | 35.0% | |
| AACAGGTGAATTCTAATGAG+TGG | + | tig0031148:4658-4677 | Msa1445570:intron | 35.0% | |
| !! | GTCAAAAGTATTGCAACTTG+TGG | + | tig0031148:4713-4732 | Msa1445570:CDS | 35.0% |
| AACTTTATCCAGAGATCACA+CGG | - | tig0031148:4854-4873 | None:intergenic | 35.0% | |
| TGTGATTCTACAAAAGGACA+TGG | - | tig0031148:4948-4967 | None:intergenic | 35.0% | |
| GTAGGATGTGATTCTACAAA+AGG | - | tig0031148:4954-4973 | None:intergenic | 35.0% | |
| ACCCAAATTAGTTAAGCCTA+GGG | - | tig0031148:5001-5020 | None:intergenic | 35.0% | |
| CTAACATCAGTATGGTTACT+TGG | - | tig0031148:5055-5074 | None:intergenic | 35.0% | |
| TTAGACCTGTTCCTATAGTA+GGG | + | tig0031148:5071-5090 | Msa1445570:intron | 35.0% | |
| AATGTCATACTCCAAAGAAG+TGG | + | tig0031148:5120-5139 | Msa1445570:intron | 35.0% | |
| GATAAGATAACAGTAGTAGC+AGG | + | tig0031148:5292-5311 | Msa1445570:intron | 35.0% | |
| TTCGTGAGAATCACAAAGAT+AGG | - | tig0031148:5445-5464 | None:intergenic | 35.0% | |
| CAGATATATTCCATCTGCAA+AGG | + | tig0031148:5504-5523 | Msa1445570:intron | 35.0% | |
| TTGAAGGTCAGAGAAATAAC+TGG | - | tig0031148:5592-5611 | None:intergenic | 35.0% | |
| TCTTCGTAAGTTAACTGCTT+AGG | - | tig0031148:5656-5675 | None:intergenic | 35.0% | |
| TCTATACTATTGCAGATGTG+GGG | + | tig0031148:5682-5701 | Msa1445570:intron | 35.0% | |
| ! | AATCCTTTATACAGCTTTGG+GGG | - | tig0031148:5726-5745 | None:intergenic | 35.0% |
| CCAAATCCTTTATACAGCTT+TGG | - | tig0031148:5729-5748 | None:intergenic | 35.0% | |
| CCAAAGCTGTATAAAGGATT+TGG | + | tig0031148:5726-5745 | Msa1445570:CDS | 35.0% | |
| ACAAAGTTGCTTCTCATTGT+TGG | + | tig0031148:5838-5857 | Msa1445570:intron | 35.0% | |
| TCATTGTTGGATCAGTACTT+TGG | + | tig0031148:5851-5870 | Msa1445570:intron | 35.0% | |
| GTTCCATGTATGATACACTT+AGG | + | tig0031148:5882-5901 | Msa1445570:intron | 35.0% | |
| TGTCCTAAGTGTATCATACA+TGG | - | tig0031148:5888-5907 | None:intergenic | 35.0% | |
| TGAGAACTTCAAAAAGCTTC+TGG | - | tig0031148:6112-6131 | None:intergenic | 35.0% | |
| !!! | GAAGCTTTTTGAAGTTCTCA+TGG | + | tig0031148:6112-6131 | Msa1445570:CDS | 35.0% |
| !!! | AGCTTTTTGAAGTTCTCATG+GGG | + | tig0031148:6114-6133 | Msa1445570:CDS | 35.0% |
| AAGTCAGATGACCTTTATGT+TGG | + | tig0031148:6161-6180 | Msa1445570:CDS | 35.0% | |
| ! | TATTTAGGACACATTCCATG+TGG | - | tig0031148:6415-6434 | None:intergenic | 35.0% |
| AATAGGATTAAGACCCACTT+TGG | + | tig0031148:6442-6461 | Msa1445570:intron | 35.0% | |
| CATGGAATACAAAGCTTGAT+TGG | + | tig0031148:6483-6502 | Msa1445570:intron | 35.0% | |
| ! | ACGTCTGTTTTACAGTTTCA+GGG | + | tig0031148:6663-6682 | Msa1445570:intron | 35.0% |
| TATCTGTGTTCGGATTTAGA+AGG | - | tig0031148:6865-6884 | None:intergenic | 35.0% | |
| !! | ATTTTGTTATCCCAGTTCTG+GGG | + | tig0031148:7194-7213 | Msa1445570:intron | 35.0% |
| AAGTTGGAAGCAATTTAGAG+TGG | + | tig0031148:7262-7281 | Msa1445570:intron | 35.0% | |
| CACAAAACAGCAGAAAATGT+AGG | - | tig0031148:7323-7342 | None:intergenic | 35.0% | |
| ATGTGGTACAAAAATTACGG+AGG | - | tig0031148:7391-7410 | None:intergenic | 35.0% | |
| ATGTGGTACAGAATTATCGT+AGG | + | tig0031148:7668-7687 | Msa1445570:intron | 35.0% | |
| ATTAGGATCAATTGACACCA+TGG | - | tig0031148:7746-7765 | None:intergenic | 35.0% | |
| ATCCATTAAAGTTACCGTTG+TGG | + | tig0031148:8081-8100 | Msa1445570:intron | 35.0% | |
| TCCATTAAAGTTACCGTTGT+GGG | + | tig0031148:8082-8101 | Msa1445570:intron | 35.0% | |
| AATGAATAACCATCCCACAA+CGG | - | tig0031148:8098-8117 | None:intergenic | 35.0% | |
| TCCCTTTCCAACACTTATAT+TGG | + | tig0031148:8578-8597 | Msa1445570:intron | 35.0% | |
| !! | GATGTTTTCCTCTTGCTTTT+AGG | + | tig0031148:8656-8675 | Msa1445570:intron | 35.0% |
| TCTTCATACCTAAAAGCAAG+AGG | - | tig0031148:8667-8686 | None:intergenic | 35.0% | |
| GCTCAAAATAATGCAACTGT+TGG | + | tig0031148:8923-8942 | Msa1445570:CDS | 35.0% | |
| TTAACTCGACGATGATTTAG+AGG | + | tig0031148:9008-9027 | Msa1445570:intron | 35.0% | |
| ! | TAGCTGATGGACATAATTGA+AGG | - | tig0031148:9125-9144 | None:intergenic | 35.0% |
| CTCAAATGAATAGTAGCTGA+TGG | - | tig0031148:9138-9157 | None:intergenic | 35.0% | |
| ATGGCAGAGAGAAAAGTTAA+AGG | - | tig0031148:9188-9207 | None:intergenic | 35.0% | |
| GGATAATCTGGTCAATATGA+AGG | - | tig0031148:9268-9287 | None:intergenic | 35.0% | |
| TTAATGAATTGGAAGAGCCA+TGG | + | tig0031148:9418-9437 | Msa1445570:intron | 35.0% | |
| ACACGGTTGGCAAAAAAAAA+AGG | - | tig0031148:9544-9563 | None:intergenic | 35.0% | |
| AAAAACAGAACTTACACGGT+TGG | - | tig0031148:9557-9576 | None:intergenic | 35.0% | |
| !!! | CCGTGTAAGTTCTGTTTTTA+TGG | + | tig0031148:9558-9577 | Msa1445570:intron | 35.0% |
| AGAAGGATATGCATTGTAAC+TGG | - | tig0031148:9722-9741 | None:intergenic | 35.0% | |
| !! | GCAAGAAAATAGGAAGTACT+TGG | + | tig0031148:9772-9791 | Msa1445570:CDS | 35.0% |
| !! | AAAATAGGAAGTACTTGGCT+TGG | + | tig0031148:9777-9796 | Msa1445570:CDS | 35.0% |
| AATTATCGATCAACAGTGAC+AGG | + | tig0031148:9825-9844 | Msa1445570:exon | 35.0% | |
| ! | TTTTTCCCCTTTCACTTGAA+AGG | + | tig0031148:10017-10036 | Msa1445570:three_prime_UTR | 35.0% |
| CATTGTTACGAGCAAATTGA+GGG | + | tig0031148:10049-10068 | Msa1445570:three_prime_UTR | 35.0% | |
| TGTCATTCTAAACAAGGCTT+TGG | - | tig0031148:10167-10186 | None:intergenic | 35.0% | |
| TGTCACTGTCATTCTAAACA+AGG | - | tig0031148:10173-10192 | None:intergenic | 35.0% | |
| AATCGGTTATCGGAGTTTGA+GGG | - | tig0031148:2252-2271 | None:intergenic | 40.0% | |
| ACCATGCGAAAAACTAAACC+CGG | + | tig0031148:2295-2314 | Msa1445570:CDS | 40.0% | |
| ! | TTCTAGGTTTTCCTCTTCTC+TGG | + | tig0031148:2362-2381 | Msa1445570:CDS | 40.0% |
| ! | TCAATGGATTTCCAGAGAAG+AGG | - | tig0031148:2376-2395 | None:intergenic | 40.0% |
| !!! | GTCAATGCTGTTGATTTTGG+CGG | + | tig0031148:2733-2752 | Msa1445570:CDS | 40.0% |
| !!! | TCAATGCTGTTGATTTTGGC+GGG | + | tig0031148:2734-2753 | Msa1445570:CDS | 40.0% |
| !! | TTGATTTTGGCGGGAAATTG+AGG | + | tig0031148:2743-2762 | Msa1445570:CDS | 40.0% |
| GAATGTGTATGGAGAAGAGA+AGG | + | tig0031148:2807-2826 | Msa1445570:CDS | 40.0% | |
| ! | AGAGAAGGTGTATAGTGTTG+TGG | + | tig0031148:2822-2841 | Msa1445570:CDS | 40.0% |
| TAGTGTTGTGGTGGTAAATG+GGG | + | tig0031148:2834-2853 | Msa1445570:CDS | 40.0% | |
| ! | GTAAGGTGTTTGTGAATGGT+GGG | + | tig0031148:2956-2975 | Msa1445570:CDS | 40.0% |
| TTTGCTTAATGCTGACCCAA+GGG | + | tig0031148:3050-3069 | Msa1445570:CDS | 40.0% | |
| CAATCATAAACCCAATCCCT+TGG | - | tig0031148:3069-3088 | None:intergenic | 40.0% | |
| CAAGGGATTGGGTTTATGAT+TGG | + | tig0031148:3067-3086 | Msa1445570:CDS | 40.0% | |
| AGACTGTCTATGTGATTGCT+TGG | - | tig0031148:3462-3481 | None:intergenic | 40.0% | |
| ATTGCCATGATTCAGGCATA+GGG | - | tig0031148:3829-3848 | None:intergenic | 40.0% | |
| TGGTAAGATTGCCATGATTC+AGG | - | tig0031148:3836-3855 | None:intergenic | 40.0% | |
| CTTACCACCACAACTATTTC+CGG | + | tig0031148:3849-3868 | Msa1445570:intron | 40.0% | |
| ATTACCGGAAATAGTTGTGG+TGG | - | tig0031148:3856-3875 | None:intergenic | 40.0% | |
| TACAATTAGGAGACTTCACC+TGG | - | tig0031148:4106-4125 | None:intergenic | 40.0% | |
| GCAAGACTCATTGTATGCTT+TGG | + | tig0031148:4132-4151 | Msa1445570:intron | 40.0% | |
| AATATGTCAGATGATCTGGG+TGG | - | tig0031148:4404-4423 | None:intergenic | 40.0% | |
| CAGAGACACATACATAACTC+AGG | - | tig0031148:4480-4499 | None:intergenic | 40.0% | |
| TTAGATACTTCAGTTGCAGC+TGG | + | tig0031148:4684-4703 | Msa1445570:CDS | 40.0% | |
| GTGTGATCTCTGGATAAAGT+TGG | + | tig0031148:4853-4872 | Msa1445570:intron | 40.0% | |
| TATATAAACTGCAGCACCAC+TGG | + | tig0031148:4876-4895 | Msa1445570:intron | 40.0% | |
| TGGAACCTATGAGGTACATT+GGG | - | tig0031148:4928-4947 | None:intergenic | 40.0% | |
| ATGGAACCTATGAGGTACAT+TGG | - | tig0031148:4929-4948 | None:intergenic | 40.0% | |
| AAAAGGACATGGAACCTATG+AGG | - | tig0031148:4937-4956 | None:intergenic | 40.0% | |
| TGCCCTAGGCTTAACTAATT+TGG | + | tig0031148:4996-5015 | Msa1445570:intron | 40.0% | |
| GCCCTAGGCTTAACTAATTT+GGG | + | tig0031148:4997-5016 | Msa1445570:intron | 40.0% | |
| GACCCAAATTAGTTAAGCCT+AGG | - | tig0031148:5002-5021 | None:intergenic | 40.0% | |
| GAACAGGTCTAACATCAGTA+TGG | - | tig0031148:5063-5082 | None:intergenic | 40.0% | |
| GTTAGACCTGTTCCTATAGT+AGG | + | tig0031148:5070-5089 | Msa1445570:intron | 40.0% | |
| ATCACAATCAGCATGATCTC+TGG | - | tig0031148:5172-5191 | None:intergenic | 40.0% | |
| AGACAGACACAAACTACAAG+TGG | - | tig0031148:5202-5221 | None:intergenic | 40.0% | |
| !! | GGAGAGATCTCTAAGACTAA+TGG | + | tig0031148:5556-5575 | Msa1445570:CDS | 40.0% |
| GGAGAAATCATATGTCTGAC+TGG | - | tig0031148:5763-5782 | None:intergenic | 40.0% | |
| CAGACATATGATTTCTCCTC+AGG | + | tig0031148:5765-5784 | Msa1445570:CDS | 40.0% | |
| ACAACTACCACTACTACCTT+AGG | + | tig0031148:6512-6531 | Msa1445570:intron | 40.0% | |
| TTGACAACCTAAGGTAGTAG+TGG | - | tig0031148:6522-6541 | None:intergenic | 40.0% | |
| ! | GTGCTACTATTGACAACCTA+AGG | - | tig0031148:6531-6550 | None:intergenic | 40.0% |
| GCTACTATTCCGTAACACAT+CGG | - | tig0031148:6577-6596 | None:intergenic | 40.0% | |
| CTGGTTGAACATTATCAGAC+CGG | + | tig0031148:6626-6645 | Msa1445570:intron | 40.0% | |
| AAACTGTAAAACAGACGTGC+GGG | - | tig0031148:6661-6680 | None:intergenic | 40.0% | |
| GAAACTGTAAAACAGACGTG+CGG | - | tig0031148:6662-6681 | None:intergenic | 40.0% | |
| ! | CACGTCTGTTTTACAGTTTC+AGG | + | tig0031148:6662-6681 | Msa1445570:intron | 40.0% |
| CAAAATAATGTGGACAGGGA+TGG | - | tig0031148:7180-7199 | None:intergenic | 40.0% | |
| TTGTCAATCCCAAATAGCTG+CGG | - | tig0031148:7226-7245 | None:intergenic | 40.0% | |
| !! | TTAATGGATTCAACCCAGCA+TGG | - | tig0031148:8070-8089 | None:intergenic | 40.0% |
| TCCCACAACGGTAACTTTAA+TGG | - | tig0031148:8086-8105 | None:intergenic | 40.0% | |
| TTAAAGTTACCGTTGTGGGA+TGG | + | tig0031148:8086-8105 | Msa1445570:intron | 40.0% | |
| GCTTGGATCTCTTTCTAGAT+TGG | + | tig0031148:8238-8257 | Msa1445570:CDS | 40.0% | |
| AGATTGGTATGCTTATCGAC+TGG | + | tig0031148:8254-8273 | Msa1445570:intron | 40.0% | |
| ! | GATTGGTATGCTTATCGACT+GGG | + | tig0031148:8255-8274 | Msa1445570:intron | 40.0% |
| TGCAGGTACAATCATTACCA+AGG | + | tig0031148:8343-8362 | Msa1445570:intron | 40.0% | |
| ATTGAGAGAAAGTCTCGTAG+AGG | - | tig0031148:8541-8560 | None:intergenic | 40.0% | |
| GGCAGCAAAATATTGAGGAA+AGG | - | tig0031148:8864-8883 | None:intergenic | 40.0% | |
| TCGAAGGCAGCAAAATATTG+AGG | - | tig0031148:8869-8888 | None:intergenic | 40.0% | |
| AAGGCAATCAAGATCTCTTG+CGG | + | tig0031148:9082-9101 | Msa1445570:CDS | 40.0% | |
| GCCCATAAAAGATGTCATGA+TGG | + | tig0031148:9442-9461 | Msa1445570:intron | 40.0% | |
| TGGTACAATTTCAGAGCTAG+AGG | - | tig0031148:9594-9613 | None:intergenic | 40.0% | |
| ! | CGTGAGATGCACAGTTTTTA+AGG | + | tig0031148:9635-9654 | Msa1445570:intron | 40.0% |
| AAAATGGCTGATAGCACACA+AGG | - | tig0031148:9694-9713 | None:intergenic | 40.0% | |
| ATTCTCTTATCGCAGCTAGA+AGG | - | tig0031148:9739-9758 | None:intergenic | 40.0% | |
| ! | TTCTAGCTGCGATAAGAGAA+TGG | + | tig0031148:9738-9757 | Msa1445570:CDS | 40.0% |
| !! | AAATGACAGTAGTGCTGACA+CGG | + | tig0031148:9921-9940 | Msa1445570:three_prime_UTR | 40.0% |
| ACGTATACTAGTTGTCCCTA+AGG | - | tig0031148:9948-9967 | None:intergenic | 40.0% | |
| ! | AACCACCTTTCAAGTGAAAG+GGG | - | tig0031148:10025-10044 | None:intergenic | 40.0% |
| ! | CAACCACCTTTCAAGTGAAA+GGG | - | tig0031148:10026-10045 | None:intergenic | 40.0% |
| ! | ACAACCACCTTTCAAGTGAA+AGG | - | tig0031148:10027-10046 | None:intergenic | 40.0% |
| ! | CCTCAATTTGCTCGTAACAA+TGG | - | tig0031148:10051-10070 | None:intergenic | 40.0% |
| CCATTGTTACGAGCAAATTG+AGG | + | tig0031148:10048-10067 | Msa1445570:three_prime_UTR | 40.0% | |
| ! | TAAACAAGGCTTTGGTGAAC+AGG | - | tig0031148:10159-10178 | None:intergenic | 40.0% |
| ! | GTGGTTCTGCAAATTCAGTG+AGG | - | tig0031148:2159-2178 | None:intergenic | 45.0% |
| ! | TGAATCTGAGATTTCCGCCA+TGG | - | tig0031148:2197-2216 | None:intergenic | 45.0% |
| AATCTCAGATTCACCACCAC+CGG | + | tig0031148:2204-2223 | Msa1445570:CDS | 45.0% | |
| GAATCGGTTATCGGAGTTTG+AGG | - | tig0031148:2253-2272 | None:intergenic | 45.0% | |
| ATGAAGAGACGTTTAACGCC+GGG | - | tig0031148:2316-2335 | None:intergenic | 45.0% | |
| GATGAAGAGACGTTTAACGC+CGG | - | tig0031148:2317-2336 | None:intergenic | 45.0% | |
| AGGTGCACGGTAGATTTCAA+TGG | - | tig0031148:2392-2411 | None:intergenic | 45.0% | |
| TAAGGGACTGGATTCGATGT+TGG | - | tig0031148:2446-2465 | None:intergenic | 45.0% | |
| ATTCGCAATGCGGTTGCAAT+GGG | + | tig0031148:2575-2594 | Msa1445570:CDS | 45.0% | |
| ACTCTGTGTCTGTCGTTGAA+AGG | + | tig0031148:2602-2621 | Msa1445570:CDS | 45.0% | |
| ATTGAGGCGAAACGATGAAG+AGG | + | tig0031148:2759-2778 | Msa1445570:CDS | 45.0% | |
| ! | GAAGGTGTATAGTGTTGTGG+TGG | + | tig0031148:2825-2844 | Msa1445570:CDS | 45.0% |
| ! | GTGGATTGTTGGGAAGGTTT+CGG | + | tig0031148:2897-2916 | Msa1445570:CDS | 45.0% |
| !!! | TGTGGCGGAGATTTTTGGTA+AGG | + | tig0031148:2939-2958 | Msa1445570:CDS | 45.0% |
| ! | GGTAAGGTGTTTGTGAATGG+TGG | + | tig0031148:2955-2974 | Msa1445570:CDS | 45.0% |
| GGAGTGAAGATGGTTCGATT+CGG | + | tig0031148:2977-2996 | Msa1445570:CDS | 45.0% | |
| GATTCGGAGTGAGTTTATGC+CGG | + | tig0031148:2993-3012 | Msa1445570:CDS | 45.0% | |
| !! | TTTATGCCGGTTGGTTCTGA+TGG | + | tig0031148:3006-3025 | Msa1445570:CDS | 45.0% |
| !! | TTATGCCGGTTGGTTCTGAT+GGG | + | tig0031148:3007-3026 | Msa1445570:CDS | 45.0% |
| GTTTGCTTAATGCTGACCCA+AGG | + | tig0031148:3049-3068 | Msa1445570:CDS | 45.0% | |
| TTAATGCTGACCCAAGGGAT+TGG | + | tig0031148:3055-3074 | Msa1445570:CDS | 45.0% | |
| TAATGCTGACCCAAGGGATT+GGG | + | tig0031148:3056-3075 | Msa1445570:CDS | 45.0% | |
| CAATGCTTCTGTGTCATGTC+TGG | + | tig0031148:3567-3586 | Msa1445570:intron | 45.0% | |
| GATTGCCATGATTCAGGCAT+AGG | - | tig0031148:3830-3849 | None:intergenic | 45.0% | |
| CTTCAAATATTTGGCACCCC+TGG | + | tig0031148:3907-3926 | Msa1445570:intron | 45.0% | |
| CTAAGCTAACAACCAGACAG+TGG | - | tig0031148:3952-3971 | None:intergenic | 45.0% | |
| GGATGCAAAGCCTCAATAAC+AGG | - | tig0031148:4059-4078 | None:intergenic | 45.0% | |
| ! | TCAACAGTGACATCGGCTAT+AGG | - | tig0031148:4080-4099 | None:intergenic | 45.0% |
| ! | CTGGCTTTCAACAGTGACAT+CGG | - | tig0031148:4087-4106 | None:intergenic | 45.0% |
| ATACTTCAGTTGCAGCTGGT+GGG | + | tig0031148:4688-4707 | Msa1445570:CDS | 45.0% | |
| CTAACAATCCGTGTGATCTC+TGG | + | tig0031148:4843-4862 | Msa1445570:intron | 45.0% | |
| AGTCATGCCATGACATACAC+AGG | - | tig0031148:4903-4922 | None:intergenic | 45.0% | |
| ACTCACCCAATGTACCTCAT+AGG | + | tig0031148:4920-4939 | Msa1445570:intron | 45.0% | |
| ! | CCAGACACAAATGGTGATGT+AGG | - | tig0031148:4972-4991 | None:intergenic | 45.0% |
| CCTACATCACCATTTGTGTC+TGG | + | tig0031148:4969-4988 | Msa1445570:intron | 45.0% | |
| CATGTCCCTACTATAGGAAC+AGG | - | tig0031148:5079-5098 | None:intergenic | 45.0% | |
| CTGTTCCTATAGTAGGGACA+TGG | + | tig0031148:5077-5096 | Msa1445570:intron | 45.0% | |
| AAGCTCCATGTCCCTACTAT+AGG | - | tig0031148:5085-5104 | None:intergenic | 45.0% | |
| AATCTGCAGCACCACTTCTT+TGG | - | tig0031148:5134-5153 | None:intergenic | 45.0% | |
| AGCAGTAGTCTTCCCAATGT+GGG | - | tig0031148:5237-5256 | None:intergenic | 45.0% | |
| AAGCAGTAGTCTTCCCAATG+TGG | - | tig0031148:5238-5257 | None:intergenic | 45.0% | |
| TTGTGATTCTCACGAAGTGC+TGG | + | tig0031148:5449-5468 | Msa1445570:intron | 45.0% | |
| ATACTATTGCAGATGTGGGG+AGG | + | tig0031148:5685-5704 | Msa1445570:intron | 45.0% | |
| GAACCCCCAAAGCTGTATAA+AGG | + | tig0031148:5720-5739 | Msa1445570:CDS | 45.0% | |
| AAGTTCTCATGGGGCAGTTA+CGG | + | tig0031148:6123-6142 | Msa1445570:CDS | 45.0% | |
| ! | GACCTTTATGTTGGTGAGTC+TGG | + | tig0031148:6170-6189 | Msa1445570:CDS | 45.0% |
| TGCCAGACTCACCAACATAA+AGG | - | tig0031148:6175-6194 | None:intergenic | 45.0% | |
| GCGAAAGAGGTTTCACAGAA+TGG | + | tig0031148:6213-6232 | Msa1445570:CDS | 45.0% | |
| ! | AGACCCACTTTGGAAACACA+TGG | + | tig0031148:6452-6471 | Msa1445570:intron | 45.0% |
| ! | GACCCACTTTGGAAACACAT+GGG | + | tig0031148:6453-6472 | Msa1445570:intron | 45.0% |
| ! | ACCCACTTTGGAAACACATG+GGG | + | tig0031148:6454-6473 | Msa1445570:intron | 45.0% |
| TCCCCATGTGTTTCCAAAGT+GGG | - | tig0031148:6458-6477 | None:intergenic | 45.0% | |
| TTCCCCATGTGTTTCCAAAG+TGG | - | tig0031148:6459-6478 | None:intergenic | 45.0% | |
| AAACACATGGGGAAGAGTCA+TGG | + | tig0031148:6465-6484 | Msa1445570:intron | 45.0% | |
| AGGTTGTCAATAGTAGCACC+AGG | + | tig0031148:6532-6551 | Msa1445570:intron | 45.0% | |
| AGGATCACTCCGATGTGTTA+CGG | + | tig0031148:6565-6584 | Msa1445570:intron | 45.0% | |
| AAATATGCCACGTGACCCAA+CGG | - | tig0031148:6729-6748 | None:intergenic | 45.0% | |
| GGGAATTGGATGTCTTGTCA+AGG | + | tig0031148:8177-8196 | Msa1445570:intron | 45.0% | |
| ! | AGAAAGAGATCCAAGCGTTG+TGG | - | tig0031148:8234-8253 | None:intergenic | 45.0% |
| ! | ATATTTTGCTGCCTTCGAGC+AGG | + | tig0031148:8871-8890 | Msa1445570:intron | 45.0% |
| TGAAAACTTCACCTGCTCGA+AGG | - | tig0031148:8885-8904 | None:intergenic | 45.0% | |
| ! | GCAGGTGAAGTTTTCACTTG+AGG | + | tig0031148:8889-8908 | Msa1445570:intron | 45.0% |
| GGAATGTATGATGCTTCTGC+TGG | + | tig0031148:8944-8963 | Msa1445570:CDS | 45.0% | |
| ! | GACATCTTTTATGGGCACCA+TGG | - | tig0031148:9438-9457 | None:intergenic | 45.0% |
| !! | TAGGAAGTACTTGGCTTGGA+AGG | + | tig0031148:9781-9800 | Msa1445570:CDS | 45.0% |
| !! | AGGAAGTACTTGGCTTGGAA+GGG | + | tig0031148:9782-9801 | Msa1445570:CDS | 45.0% |
| ! | ACAGGTTGAAGCTAGTTTCC+AGG | + | tig0031148:9843-9862 | Msa1445570:three_prime_UTR | 45.0% |
| CGTGCAACAAGACATTGATG+CGG | + | tig0031148:9965-9984 | Msa1445570:three_prime_UTR | 45.0% | |
| TTCCCCTTTCACTTGAAAGG+TGG | + | tig0031148:10020-10039 | Msa1445570:three_prime_UTR | 45.0% | |
| ! | ATGGAAGCGTGAAGTGATCG+TGG | - | tig0031148:2178-2197 | None:intergenic | 50.0% |
| ACGATCACTTCACGCTTCCA+TGG | + | tig0031148:2177-2196 | Msa1445570:exon | 50.0% | |
| ATCACTTCACGCTTCCATGG+CGG | + | tig0031148:2180-2199 | Msa1445570:exon | 50.0% | |
| !!! | TCGTCGGTGGTTTTTGGTTC+CGG | - | tig0031148:2226-2245 | None:intergenic | 50.0% |
| ! | GGGTTTTCGTCGGTGGTTTT+TGG | - | tig0031148:2232-2251 | None:intergenic | 50.0% |
| ! | AGTTTGAGGGTTTTCGTCGG+TGG | - | tig0031148:2239-2258 | None:intergenic | 50.0% |
| ! | CGGAGTTTGAGGGTTTTCGT+CGG | - | tig0031148:2242-2261 | None:intergenic | 50.0% |
| !!! | GCCGGGTTTAGTTTTTCGCA+TGG | - | tig0031148:2299-2318 | None:intergenic | 50.0% |
| AAGGATTCGATGCGGTCGAA+AGG | - | tig0031148:2418-2437 | None:intergenic | 50.0% | |
| TGGAGGAGAAGGATTCGATG+CGG | - | tig0031148:2426-2445 | None:intergenic | 50.0% | |
| GGATTCGATGTTGGAGGAGA+AGG | - | tig0031148:2437-2456 | None:intergenic | 50.0% | |
| ACACGGAAAGAGTAAGGGAC+TGG | - | tig0031148:2458-2477 | None:intergenic | 50.0% | |
| GATTCGCAATGCGGTTGCAA+TGG | + | tig0031148:2574-2593 | Msa1445570:CDS | 50.0% | |
| TTCGCAATGCGGTTGCAATG+GGG | + | tig0031148:2576-2595 | Msa1445570:CDS | 50.0% | |
| CGATGAAGAGGCGGATGAAT+TGG | + | tig0031148:2771-2790 | Msa1445570:CDS | 50.0% | |
| TGTTGTGGTGGTAAATGGGG+AGG | + | tig0031148:2837-2856 | Msa1445570:CDS | 50.0% | |
| AAATGGGGAGGAAGAGGTGA+AGG | + | tig0031148:2849-2868 | Msa1445570:CDS | 50.0% | |
| AAGAGGTGAAGGCTGTGGTT+GGG | + | tig0031148:2860-2879 | Msa1445570:CDS | 50.0% | |
| ! | TGGTTGGGAAGTACAGGCAT+GGG | + | tig0031148:2875-2894 | Msa1445570:CDS | 50.0% |
| !! | TACAGGCATGGGTGGATTGT+TGG | + | tig0031148:2886-2905 | Msa1445570:CDS | 50.0% |
| !! | ACAGGCATGGGTGGATTGTT+GGG | + | tig0031148:2887-2906 | Msa1445570:CDS | 50.0% |
| GATTGTTGGGAAGGTTTCGG+AGG | + | tig0031148:2900-2919 | Msa1445570:CDS | 50.0% | |
| !! | TTGCGTGTGGCGGAGATTTT+TGG | + | tig0031148:2934-2953 | Msa1445570:CDS | 50.0% |
| ! | GTGAATGGTGGGAGTGAAGA+TGG | + | tig0031148:2967-2986 | Msa1445570:CDS | 50.0% |
| ATCCTCCCATCAGAACCAAC+CGG | - | tig0031148:3015-3034 | None:intergenic | 50.0% | |
| !! | ACACAGAAGCATTGCCAGCA+GGG | - | tig0031148:3561-3580 | None:intergenic | 50.0% |
| TCTGTGTCATGTCTGGTTGC+AGG | + | tig0031148:3574-3593 | Msa1445570:intron | 50.0% | |
| CTGTGTCATGTCTGGTTGCA+GGG | + | tig0031148:3575-3594 | Msa1445570:intron | 50.0% | |
| TGTGTCATGTCTGGTTGCAG+GGG | + | tig0031148:3576-3595 | Msa1445570:intron | 50.0% | |
| ! | ATTAAAACTGGGGGGTGCAG+TGG | - | tig0031148:3628-3647 | None:intergenic | 50.0% |
| CAAATGCATTGCCGTTCCAG+CGG | + | tig0031148:3677-3696 | Msa1445570:intron | 50.0% | |
| GCATCCCTATGCCTGAATCA+TGG | + | tig0031148:3822-3841 | Msa1445570:intron | 50.0% | |
| ATTCAAGATCCGCCACTGTC+TGG | + | tig0031148:3937-3956 | Msa1445570:intron | 50.0% | |
| AGCTAACAACCAGACAGTGG+CGG | - | tig0031148:3949-3968 | None:intergenic | 50.0% | |
| CGATGTCACTGTTGAAAGCC+AGG | + | tig0031148:4085-4104 | Msa1445570:CDS | 50.0% | |
| GATACTTCAGTTGCAGCTGG+TGG | + | tig0031148:4687-4706 | Msa1445570:CDS | 50.0% | |
| CATGACATACACAGGACCAG+TGG | - | tig0031148:4895-4914 | None:intergenic | 50.0% | |
| CACTGGTCCTGTGTATGTCA+TGG | + | tig0031148:4893-4912 | Msa1445570:intron | 50.0% | |
| GTAGGGACATGGAGCTTATG+AGG | + | tig0031148:5088-5107 | Msa1445570:intron | 50.0% | |
| ! | TTGTGCCACTATCCCCACAT+TGG | + | tig0031148:5221-5240 | Msa1445570:intron | 50.0% |
| ! | TGTGCCACTATCCCCACATT+GGG | + | tig0031148:5222-5241 | Msa1445570:intron | 50.0% |
| TCTTCCCAATGTGGGGATAG+TGG | - | tig0031148:5229-5248 | None:intergenic | 50.0% | |
| GCAGTAGTCTTCCCAATGTG+GGG | - | tig0031148:5236-5255 | None:intergenic | 50.0% | |
| AGAGGACACTCCTTTGCAGA+TGG | - | tig0031148:5517-5536 | None:intergenic | 50.0% | |
| ! | TTCGCAAGCTCTAGTTGGAG+AGG | - | tig0031148:5535-5554 | None:intergenic | 50.0% |
| CTCCAACTAGAGCTTGCGAA+TGG | + | tig0031148:5535-5554 | Msa1445570:CDS | 50.0% | |
| ! | CTCCATTCGCAAGCTCTAGT+TGG | - | tig0031148:5540-5559 | None:intergenic | 50.0% |
| TCTGGCACATCCATTCTCCT+AGG | + | tig0031148:6188-6207 | Msa1445570:CDS | 50.0% | |
| CTGGCACATCCATTCTCCTA+GGG | + | tig0031148:6189-6208 | Msa1445570:CDS | 50.0% | |
| TCTTTCGCTCCCTAGGAGAA+TGG | - | tig0031148:6201-6220 | None:intergenic | 50.0% | |
| ATTCTCCTAGGGAGCGAAAG+AGG | + | tig0031148:6200-6219 | Msa1445570:CDS | 50.0% | |
| TGAAACCTCTTTCGCTCCCT+AGG | - | tig0031148:6208-6227 | None:intergenic | 50.0% | |
| GTCAATAGTAGCACCAGGAC+AGG | + | tig0031148:6537-6556 | Msa1445570:intron | 50.0% | |
| TAGCACCAGGACAGGATAAC+AGG | + | tig0031148:6545-6564 | Msa1445570:intron | 50.0% | |
| GTGATCCTGTTATCCTGTCC+TGG | - | tig0031148:6553-6572 | None:intergenic | 50.0% | |
| ! | AACACAGGTTGAGACACCGT+TGG | + | tig0031148:6710-6729 | Msa1445570:intron | 50.0% |
| ! | ACACAGGTTGAGACACCGTT+GGG | + | tig0031148:6711-6730 | Msa1445570:intron | 50.0% |
| GGTGAACTCCGCAGCTATTT+GGG | + | tig0031148:7215-7234 | Msa1445570:intron | 50.0% | |
| ! | TTGTGGGCTGACTGTGTGTA+GGG | + | tig0031148:8157-8176 | Msa1445570:intron | 50.0% |
| GCTGACTGTGTGTAGGGAAT+TGG | + | tig0031148:8163-8182 | Msa1445570:intron | 50.0% | |
| ! | CAAGCGTTGTGGCACATGAA+AGG | - | tig0031148:8223-8242 | None:intergenic | 50.0% |
| CTTTCATGTGCCACAACGCT+TGG | + | tig0031148:8221-8240 | Msa1445570:CDS | 50.0% | |
| GAGAGAAAGTCTCGTAGAGG+TGG | - | tig0031148:8538-8557 | None:intergenic | 50.0% | |
| GCAATCAAGATCTCTTGCGG+AGG | + | tig0031148:9085-9104 | Msa1445570:CDS | 50.0% | |
| ! | AGCTAGTTTCCAGGTAGTCG+AGG | + | tig0031148:9852-9871 | Msa1445570:three_prime_UTR | 50.0% |
| !! | TAGTGCTGACACGGTCCTTA+GGG | + | tig0031148:9930-9949 | Msa1445570:three_prime_UTR | 50.0% |
| GCAACAAGACATTGATGCGG+CGG | + | tig0031148:9968-9987 | Msa1445570:three_prime_UTR | 50.0% | |
| !!! | GTGGTTTTTGGTTCCGGTGG+TGG | - | tig0031148:2220-2239 | None:intergenic | 55.0% |
| !!! | TCGGTGGTTTTTGGTTCCGG+TGG | - | tig0031148:2223-2242 | None:intergenic | 55.0% |
| ! | GGTCGAAAGGAAGAGGTGCA+CGG | - | tig0031148:2405-2424 | None:intergenic | 55.0% |
| TCGATGCGGTCGAAAGGAAG+AGG | - | tig0031148:2412-2431 | None:intergenic | 55.0% | |
| GGGACTGGATTCGATGTTGG+AGG | - | tig0031148:2443-2462 | None:intergenic | 55.0% | |
| AACCGCGGTGATTCGCAATG+CGG | + | tig0031148:2565-2584 | Msa1445570:CDS | 55.0% | |
| AACCGCATTGCGAATCACCG+CGG | - | tig0031148:2570-2589 | None:intergenic | 55.0% | |
| GAGGCGAAACGATGAAGAGG+CGG | + | tig0031148:2762-2781 | Msa1445570:CDS | 55.0% | |
| GGTGGTAAATGGGGAGGAAG+AGG | + | tig0031148:2843-2862 | Msa1445570:CDS | 55.0% | |
| GAAGAGGTGAAGGCTGTGGT+TGG | + | tig0031148:2859-2878 | Msa1445570:CDS | 55.0% | |
| ! | AGGCTGTGGTTGGGAAGTAC+AGG | + | tig0031148:2869-2888 | Msa1445570:CDS | 55.0% |
| ! | GTGGTTGGGAAGTACAGGCA+TGG | + | tig0031148:2874-2893 | Msa1445570:CDS | 55.0% |
| ! | TTGGGAAGTACAGGCATGGG+TGG | + | tig0031148:2878-2897 | Msa1445570:CDS | 55.0% |
| !! | GCATGGGTGGATTGTTGGGA+AGG | + | tig0031148:2891-2910 | Msa1445570:CDS | 55.0% |
| GAAGGTTTCGGAGGACGAAG+CGG | + | tig0031148:2909-2928 | Msa1445570:CDS | 55.0% | |
| CGGAGTGAGTTTATGCCGGT+TGG | + | tig0031148:2997-3016 | Msa1445570:CDS | 55.0% | |
| !! | GACACAGAAGCATTGCCAGC+AGG | - | tig0031148:3562-3581 | None:intergenic | 55.0% |
| ! | GGATCTCTTTAGAGACCCCC+AGG | + | tig0031148:3600-3619 | Msa1445570:intron | 55.0% |
| ! | CGGTCACCCCAGTGTGTTTT+AGG | + | tig0031148:3705-3724 | Msa1445570:intron | 55.0% |
| GCGCGACCTAAAACACACTG+GGG | - | tig0031148:3714-3733 | None:intergenic | 55.0% | |
| CGCGCGACCTAAAACACACT+GGG | - | tig0031148:3715-3734 | None:intergenic | 55.0% | |
| ACGCGCGACCTAAAACACAC+TGG | - | tig0031148:3716-3735 | None:intergenic | 55.0% | |
| TCTTCCTGGGATGACGAGCA+TGG | + | tig0031148:4221-4240 | Msa1445570:CDS | 55.0% | |
| GGGCAAGCACCAGACACAAA+TGG | - | tig0031148:4981-5000 | None:intergenic | 55.0% | |
| TTGTGTCTGGTGCTTGCCCT+AGG | + | tig0031148:4982-5001 | Msa1445570:intron | 55.0% | |
| !! | TGTGGGGAGGTGTTGTGGTA+TGG | + | tig0031148:5698-5717 | Msa1445570:CDS | 55.0% |
| GGGCAGTTACGGCAACTTCT+TGG | + | tig0031148:6134-6153 | Msa1445570:CDS | 55.0% | |
| CTTGTCGCCACTGTGAAGCT+AGG | + | tig0031148:6596-6615 | Msa1445570:intron | 55.0% | |
| GCGGGGGAGTTATCTGTGTT+CGG | - | tig0031148:6875-6894 | None:intergenic | 55.0% | |
| TAGCTTCCCACTTTCCCTCG+AGG | - | tig0031148:6897-6916 | None:intergenic | 55.0% | |
| GGGTGAACTCCGCAGCTATT+TGG | + | tig0031148:7214-7233 | Msa1445570:intron | 55.0% | |
| ! | CTTGTGGGCTGACTGTGTGT+AGG | + | tig0031148:8156-8175 | Msa1445570:intron | 55.0% |
| CTCACAAGACCTCGACTACC+TGG | - | tig0031148:9864-9883 | None:intergenic | 55.0% | |
| !! | GTAGTGCTGACACGGTCCTT+AGG | + | tig0031148:9929-9948 | Msa1445570:three_prime_UTR | 55.0% |
| GGAGGAAGAGGTGAAGGCTG+TGG | + | tig0031148:2855-2874 | Msa1445570:CDS | 60.0% | |
| ! | GGACGAAGCGGTTTTGCGTG+TGG | + | tig0031148:2921-2940 | Msa1445570:CDS | 60.0% |
| ! | CGAAGCGGTTTTGCGTGTGG+CGG | + | tig0031148:2924-2943 | Msa1445570:CDS | 60.0% |
| !! | TGCCGGTTGGTTCTGATGGG+AGG | + | tig0031148:3010-3029 | Msa1445570:CDS | 60.0% |
| GTCATGTCTGGTTGCAGGGG+CGG | + | tig0031148:3579-3598 | Msa1445570:intron | 60.0% | |
| TTGCCGTTCCAGCGGTCAAG+CGG | + | tig0031148:3685-3704 | Msa1445570:intron | 60.0% | |
| TGACCGCTTGACCGCTGGAA+CGG | - | tig0031148:3691-3710 | None:intergenic | 60.0% | |
| CTTCAGTTGCAGCTGGTGGG+AGG | + | tig0031148:4691-4710 | Msa1445570:CDS | 60.0% | |
| !! | GCAGATGTGGGGAGGTGTTG+TGG | + | tig0031148:5693-5712 | Msa1445570:intron | 60.0% |
| CGCCACTGTGAAGCTAGGTG+CGG | + | tig0031148:6601-6620 | Msa1445570:intron | 60.0% | |
| GACGTGCGGGTCTCGTATTC+CGG | - | tig0031148:6648-6667 | None:intergenic | 60.0% | |
| TGAGACACCGTTGGGTCACG+TGG | + | tig0031148:6719-6738 | Msa1445570:intron | 60.0% | |
| AGATAACTCCCCCGCCTCGA+GGG | + | tig0031148:6880-6899 | Msa1445570:intron | 60.0% | |
| TTCCCACTTTCCCTCGAGGC+GGG | - | tig0031148:6893-6912 | None:intergenic | 60.0% | |
| CTTCCCACTTTCCCTCGAGG+CGG | - | tig0031148:6894-6913 | None:intergenic | 60.0% | |
| GCGGAGTTCACCCCAGAACT+GGG | - | tig0031148:7207-7226 | None:intergenic | 60.0% | |
| TGCGGAGTTCACCCCAGAAC+TGG | - | tig0031148:7208-7227 | None:intergenic | 60.0% | |
| GACATTGATGCGGCGGCTCT+TGG | + | tig0031148:9975-9994 | Msa1445570:three_prime_UTR | 60.0% | |
| TAGGTCGCGCGTTCGATCCC+TGG | + | tig0031148:3724-3743 | Msa1445570:intron | 65.0% | |
| GCTGCCATGCTCGTCATCCC+AGG | - | tig0031148:4228-4247 | None:intergenic | 65.0% | |
| CGCCGCACCTAGCTTCACAG+TGG | - | tig0031148:6606-6625 | None:intergenic | 65.0% | |
| TGTGAAGCTAGGTGCGGCGC+TGG | + | tig0031148:6607-6626 | Msa1445570:intron | 65.0% | |
| CAGATAACTCCCCCGCCTCG+AGG | + | tig0031148:6879-6898 | Msa1445570:intron | 65.0% | |
| TCCCACTTTCCCTCGAGGCG+GGG | - | tig0031148:6892-6911 | None:intergenic | 65.0% | |
| ! | TGGGGGGTGCAGTGGCACCT+GGG | - | tig0031148:3620-3639 | None:intergenic | 70.0% |
| TGGGGTGACCGCTTGACCGC+TGG | - | tig0031148:3696-3715 | None:intergenic | 70.0% | |
| TCCCCCGCCTCGAGGGAAAG+TGG | + | tig0031148:6887-6906 | Msa1445570:intron | 70.0% | |
| CCCACTTTCCCTCGAGGCGG+GGG | - | tig0031148:6891-6910 | None:intergenic | 70.0% | |
| CCCCCGCCTCGAGGGAAAGT+GGG | + | tig0031148:6888-6907 | Msa1445570:intron | 70.0% | |
| ! | GGGGGTGCAGTGGCACCTGG+GGG | - | tig0031148:3618-3637 | None:intergenic | 75.0% |
| ! | GGGGGGTGCAGTGGCACCTG+GGG | - | tig0031148:3619-3638 | None:intergenic | 75.0% |
| ! | CTGGGGGGTGCAGTGGCACC+TGG | - | tig0031148:3621-3640 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0031148 | gene | 2132 | 10195 | 2132 | ID=Msa1445570;Name=Msa1445570 |
| tig0031148 | mRNA | 2132 | 10195 | 2132 | ID=Msa1445570-mRNA-1;Parent=Msa1445570;Name=Msa1445570-mRNA-1;_AED=0.17;_eAED=0.17;_QI=64|1|1|1|0.92|0.85|14|347|588 |
| tig0031148 | exon | 2132 | 2623 | 2132 | ID=Msa1445570-mRNA-1:exon:15043;Parent=Msa1445570-mRNA-1 |
| tig0031148 | exon | 2723 | 3088 | 2723 | ID=Msa1445570-mRNA-1:exon:15044;Parent=Msa1445570-mRNA-1 |
| tig0031148 | exon | 4031 | 4106 | 4031 | ID=Msa1445570-mRNA-1:exon:15045;Parent=Msa1445570-mRNA-1 |
| tig0031148 | exon | 4191 | 4280 | 4191 | ID=Msa1445570-mRNA-1:exon:15046;Parent=Msa1445570-mRNA-1 |
| tig0031148 | exon | 4663 | 4736 | 4663 | ID=Msa1445570-mRNA-1:exon:15047;Parent=Msa1445570-mRNA-1 |
| tig0031148 | exon | 5507 | 5591 | 5507 | ID=Msa1445570-mRNA-1:exon:15048;Parent=Msa1445570-mRNA-1 |
| tig0031148 | exon | 5697 | 5786 | 5697 | ID=Msa1445570-mRNA-1:exon:15049;Parent=Msa1445570-mRNA-1 |
| tig0031148 | exon | 6104 | 6234 | 6104 | ID=Msa1445570-mRNA-1:exon:15050;Parent=Msa1445570-mRNA-1 |
| tig0031148 | exon | 8178 | 8259 | 8178 | ID=Msa1445570-mRNA-1:exon:15051;Parent=Msa1445570-mRNA-1 |
| tig0031148 | exon | 8348 | 8395 | 8348 | ID=Msa1445570-mRNA-1:exon:15052;Parent=Msa1445570-mRNA-1 |
| tig0031148 | exon | 8893 | 8965 | 8893 | ID=Msa1445570-mRNA-1:exon:15053;Parent=Msa1445570-mRNA-1 |
| tig0031148 | exon | 9075 | 9178 | 9075 | ID=Msa1445570-mRNA-1:exon:15054;Parent=Msa1445570-mRNA-1 |
| tig0031148 | exon | 9707 | 10145 | 9707 | ID=Msa1445570-mRNA-1:exon:15055;Parent=Msa1445570-mRNA-1 |
| tig0031148 | exon | 10168 | 10195 | 10168 | ID=Msa1445570-mRNA-1:exon:15056;Parent=Msa1445570-mRNA-1 |
| tig0031148 | five_prime_UTR | 2132 | 2195 | 2132 | ID=Msa1445570-mRNA-1:five_prime_utr;Parent=Msa1445570-mRNA-1 |
| tig0031148 | CDS | 2196 | 2623 | 2196 | ID=Msa1445570-mRNA-1:cds;Parent=Msa1445570-mRNA-1 |
| tig0031148 | CDS | 2723 | 3088 | 2723 | ID=Msa1445570-mRNA-1:cds;Parent=Msa1445570-mRNA-1 |
| tig0031148 | CDS | 4031 | 4106 | 4031 | ID=Msa1445570-mRNA-1:cds;Parent=Msa1445570-mRNA-1 |
| tig0031148 | CDS | 4191 | 4280 | 4191 | ID=Msa1445570-mRNA-1:cds;Parent=Msa1445570-mRNA-1 |
| tig0031148 | CDS | 4663 | 4736 | 4663 | ID=Msa1445570-mRNA-1:cds;Parent=Msa1445570-mRNA-1 |
| tig0031148 | CDS | 5507 | 5591 | 5507 | ID=Msa1445570-mRNA-1:cds;Parent=Msa1445570-mRNA-1 |
| tig0031148 | CDS | 5697 | 5786 | 5697 | ID=Msa1445570-mRNA-1:cds;Parent=Msa1445570-mRNA-1 |
| tig0031148 | CDS | 6104 | 6234 | 6104 | ID=Msa1445570-mRNA-1:cds;Parent=Msa1445570-mRNA-1 |
| tig0031148 | CDS | 8178 | 8259 | 8178 | ID=Msa1445570-mRNA-1:cds;Parent=Msa1445570-mRNA-1 |
| tig0031148 | CDS | 8348 | 8395 | 8348 | ID=Msa1445570-mRNA-1:cds;Parent=Msa1445570-mRNA-1 |
| tig0031148 | CDS | 8893 | 8965 | 8893 | ID=Msa1445570-mRNA-1:cds;Parent=Msa1445570-mRNA-1 |
| tig0031148 | CDS | 9075 | 9178 | 9075 | ID=Msa1445570-mRNA-1:cds;Parent=Msa1445570-mRNA-1 |
| tig0031148 | CDS | 9707 | 9826 | 9707 | ID=Msa1445570-mRNA-1:cds;Parent=Msa1445570-mRNA-1 |
| tig0031148 | three_prime_UTR | 9827 | 10145 | 9827 | ID=Msa1445570-mRNA-1:three_prime_utr;Parent=Msa1445570-mRNA-1 |
| tig0031148 | three_prime_UTR | 10168 | 10195 | 10168 | ID=Msa1445570-mRNA-1:three_prime_utr;Parent=Msa1445570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
