AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1424280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1424280 MtrunA17_Chr4g0055591 95.845 361 15 0 1 361 1 361 0.0 726
Msa1424280 MtrunA17_Chr1g0187811 62.604 361 123 4 13 361 133 493 1.85e-166 474
Msa1424280 MtrunA17_Chr1g0187821 62.674 359 123 5 11 361 15 370 7.16e-166 468
Msa1424280 MtrunA17_Chr1g0187831 59.945 362 129 5 11 360 16 373 2.34e-159 452
Msa1424280 MtrunA17_Chr7g0235951 59.605 354 135 3 14 361 22 373 1.22e-155 442
Msa1424280 MtrunA17_Chr7g0247991 60.665 361 134 3 7 361 15 373 6.42e-154 437
Msa1424280 MtrunA17_Chr8g0335411 60.224 357 134 3 11 361 19 373 3.73e-153 436
Msa1424280 MtrunA17_Chr7g0236011 59.664 357 136 3 11 361 19 373 7.32e-150 427
Msa1424280 MtrunA17_Chr8g0364471 54.722 360 149 4 11 361 19 373 4.43e-145 415
Msa1424280 MtrunA17_Chr2g0311711 56.695 351 142 5 11 354 17 364 7.04e-145 414
Msa1424280 MtrunA17_Chr2g0311701 54.190 358 156 3 11 361 19 375 1.96e-144 414
Msa1424280 MtrunA17_Chr4g0066991 58.543 357 120 5 11 361 19 353 2.24e-140 402
Msa1424280 MtrunA17_Chr2g0311681 53.100 371 162 6 1 361 1 369 1.32e-138 398
Msa1424280 MtrunA17_Chr8g0354261 51.275 353 163 3 11 356 19 369 2.94e-136 393
Msa1424280 MtrunA17_Chr2g0311691 51.622 370 169 4 1 361 1 369 2.28e-134 388
Msa1424280 MtrunA17_Chr8g0354241 50.708 353 165 3 11 356 19 369 5.64e-134 387
Msa1424280 MtrunA17_Chr8g0348081 51.420 352 159 3 16 361 19 364 2.28e-131 380
Msa1424280 MtrunA17_Chr2g0311741 57.407 324 126 4 45 361 9 327 1.23e-130 377
Msa1424280 MtrunA17_Chr8g0336851 50.992 353 157 4 17 361 20 364 3.09e-129 374
Msa1424280 MtrunA17_Chr8g0336751 51.404 356 165 3 11 361 45 397 5.07e-129 375
Msa1424280 MtrunA17_Chr8g0336761 51.705 352 158 3 16 361 19 364 5.79e-127 369
Msa1424280 MtrunA17_Chr8g0336631 50.708 353 161 4 16 361 19 365 3.90e-125 364
Msa1424280 MtrunA17_Chr2g0311921 50.143 349 165 5 14 356 8 353 7.86e-125 363
Msa1424280 MtrunA17_Chr2g0311761 50.413 363 167 6 7 361 15 372 2.03e-124 362
Msa1424280 MtrunA17_Chr8g0336781 48.315 356 171 4 13 361 51 400 1.72e-123 361
Msa1424280 MtrunA17_Chr2g0311831 49.167 360 175 3 7 361 15 371 1.76e-123 360
Msa1424280 MtrunA17_Chr8g0336861 50.143 349 160 5 16 356 19 361 3.07e-122 357
Msa1424280 MtrunA17_Chr4g0066121 51.045 335 151 4 13 340 16 344 8.31e-120 350
Msa1424280 MtrunA17_Chr1g0167911 46.575 365 180 5 1 360 1 355 1.20e-118 347
Msa1424280 MtrunA17_Chr1g0184241 47.740 354 176 3 11 361 20 367 8.84e-117 343
Msa1424280 MtrunA17_Chr6g0472861 49.319 367 169 7 2 356 7 368 1.68e-116 342
Msa1424280 MtrunA17_Chr2g0311861 46.742 353 160 4 14 361 18 347 3.73e-116 340
Msa1424280 MtrunA17_Chr7g0225881 47.293 351 175 5 14 356 17 365 4.71e-115 338
Msa1424280 MtrunA17_Chr1g0167951 47.727 352 173 5 15 361 10 355 2.02e-114 336
Msa1424280 MtrunA17_Chr1g0167961 47.802 364 170 7 1 356 16 367 1.42e-112 332
Msa1424280 MtrunA17_Chr7g0235981 44.886 352 164 5 11 361 5 327 1.67e-109 323
Msa1424280 MtrunA17_Chr4g0011311 54.779 272 116 2 11 277 19 288 2.26e-107 317
Msa1424280 MtrunA17_Chr7g0266651 43.052 367 198 6 1 361 1 362 2.74e-101 303
Msa1424280 MtrunA17_Chr1g0167931 42.623 366 157 5 1 361 1 318 1.32e-99 297
Msa1424280 MtrunA17_Chr8g0362741 54.613 271 103 5 11 277 19 273 6.67e-98 292
Msa1424280 MtrunA17_Chr1g0161041 42.857 343 189 3 15 354 50 388 8.60e-87 267
Msa1424280 MtrunA17_Chr1g0161081 41.399 343 194 4 15 354 27 365 2.33e-84 260
Msa1424280 MtrunA17_Chr1g0161111 41.520 342 193 4 15 353 86 423 1.98e-83 259
Msa1424280 MtrunA17_Chr8g0336831 46.502 243 115 4 1 236 8 242 1.38e-70 221
Msa1424280 MtrunA17_Chr8g0336801 55.063 158 69 1 204 361 1 156 7.91e-61 192
Msa1424280 MtrunA17_Chr6g0455481 37.838 296 172 6 60 349 41 330 1.04e-58 193
Msa1424280 MtrunA17_Chr3g0128001 34.030 335 208 5 28 356 5 332 6.55e-58 191
Msa1424280 MtrunA17_Chr8g0336871 52.571 175 75 2 182 356 3 169 6.84e-58 186
Msa1424280 MtrunA17_Chr1g0184121 38.384 297 169 5 60 348 36 326 2.41e-57 190
Msa1424280 MtrunA17_Chr1g0184111 36.700 297 174 5 60 348 36 326 1.21e-53 180
Msa1424280 MtrunA17_Chr7g0220011 34.915 295 181 5 60 349 38 326 7.80e-53 177
Msa1424280 MtrunA17_Chr8g0345831 32.743 339 206 6 29 356 11 338 1.37e-52 177
Msa1424280 MtrunA17_Chr7g0220001 35.117 299 183 5 56 349 36 328 1.69e-52 177
Msa1424280 MtrunA17_Chr5g0412651 34.983 303 172 8 60 346 37 330 3.99e-52 176
Msa1424280 MtrunA17_Chr2g0311631 31.487 343 218 7 24 356 21 356 7.15e-52 176
Msa1424280 MtrunA17_Chr7g0265351 31.667 300 197 3 60 356 38 332 3.17e-51 174
Msa1424280 MtrunA17_Chr7g0242551 32.682 358 212 11 15 352 5 353 1.54e-50 172
Msa1424280 MtrunA17_Chr3g0093741 31.563 339 220 5 24 356 17 349 2.40e-50 172
Msa1424280 MtrunA17_Chr5g0412681 31.818 308 191 7 60 358 32 329 2.29e-49 169
Msa1424280 MtrunA17_Chr8g0375701 31.522 368 223 12 10 361 1 355 4.91e-49 168
Msa1424280 MtrunA17_Chr7g0265221 30.233 344 210 8 24 343 25 362 6.69e-49 169
Msa1424280 MtrunA17_Chr8g0336791 44.845 194 92 4 1 187 8 193 1.27e-48 162
Msa1424280 MtrunA17_Chr3g0093751 30.678 339 223 5 24 356 17 349 1.67e-48 167
Msa1424280 MtrunA17_Chr3g0093761 31.563 339 219 6 24 356 17 348 1.77e-48 167
Msa1424280 MtrunA17_Chr1g0179801 30.769 338 208 8 24 343 26 355 3.70e-48 167
Msa1424280 MtrunA17_Chr8g0364161 48.765 162 76 3 11 167 19 178 8.08e-48 160
Msa1424280 MtrunA17_Chr7g0235991 53.521 142 61 1 61 197 21 162 9.25e-48 160
Msa1424280 MtrunA17_Chr5g0412671 33.993 303 175 8 60 346 37 330 1.95e-47 164
Msa1424280 MtrunA17_Chr1g0184101 31.818 308 197 5 61 361 38 339 5.14e-47 162
Msa1424280 MtrunA17_Chr5g0421101 31.214 346 211 12 24 356 12 343 5.78e-47 163
Msa1424280 MtrunA17_Chr4g0045441 33.904 292 162 8 74 344 48 329 6.57e-47 162
Msa1424280 MtrunA17_Chr8g0375571 29.429 350 226 8 24 361 10 350 1.75e-46 162
Msa1424280 MtrunA17_Chr1g0184161 31.544 298 189 6 59 348 36 326 1.76e-46 161
Msa1424280 MtrunA17_Chr4g0006371 30.387 362 208 9 25 354 14 363 2.53e-46 162
Msa1424280 MtrunA17_Chr8g0364171 66.364 110 37 0 168 277 17 126 2.89e-46 154
Msa1424280 MtrunA17_Chr3g0126741 31.143 350 221 10 1 340 1 340 1.42e-45 159
Msa1424280 MtrunA17_Chr5g0426891 31.046 306 194 6 61 356 39 337 1.83e-45 159
Msa1424280 MtrunA17_Chr3g0109041 30.904 343 213 8 25 352 10 343 5.06e-45 158
Msa1424280 MtrunA17_Chr5g0421041 30.744 309 189 9 61 356 45 341 9.88e-45 157
Msa1424280 MtrunA17_Chr4g0050031 30.631 333 208 11 23 341 21 344 1.46e-44 157
Msa1424280 MtrunA17_Chr5g0421091 31.519 349 207 12 24 356 10 342 1.56e-44 156
Msa1424280 MtrunA17_Chr3g0102041 35.294 255 153 4 61 304 39 292 1.79e-44 156
Msa1424280 MtrunA17_Chr5g0420951 31.304 345 210 11 24 354 17 348 2.44e-44 156
Msa1424280 MtrunA17_Chr1g0184151 30.976 297 190 7 60 348 37 326 3.24e-44 155
Msa1424280 MtrunA17_Chr8g0365241 30.029 343 212 11 24 352 22 350 5.56e-44 155
Msa1424280 MtrunA17_Chr5g0421011 29.598 348 224 8 24 361 12 348 8.70e-44 154
Msa1424280 MtrunA17_Chr7g0250511 31.579 342 215 9 30 361 19 351 8.95e-44 154
Msa1424280 MtrunA17_Chr8g0375671 29.393 313 202 7 61 361 52 357 9.13e-44 155
Msa1424280 MtrunA17_Chr5g0420981 30.792 341 213 10 24 352 17 346 1.16e-43 154
Msa1424280 MtrunA17_Chr5g0423191 29.968 317 197 8 53 356 39 343 1.37e-43 154
Msa1424280 MtrunA17_Chr2g0314391 27.859 341 227 8 24 354 35 366 2.49e-43 154
Msa1424280 MtrunA17_Chr5g0439011 31.494 308 175 9 57 347 4 292 4.68e-43 152
Msa1424280 MtrunA17_Chr8g0371931 32.950 261 162 5 56 304 33 292 1.10e-42 152
Msa1424280 MtrunA17_Chr4g0045451 32.459 305 164 9 61 334 26 319 1.16e-42 151
Msa1424280 MtrunA17_Chr5g0423251 30.841 321 194 10 52 356 35 343 1.25e-42 151
Msa1424280 MtrunA17_Chr8g0375601 27.066 351 233 8 25 361 11 352 2.35e-42 151
Msa1424280 MtrunA17_Chr2g0314401 29.582 311 202 7 61 361 51 354 5.40e-42 150
Msa1424280 MtrunA17_Chr1g0162351 32.155 283 161 6 73 334 92 364 7.05e-42 150
Msa1424280 MtrunA17_Chr4g0045431 32.268 313 174 8 61 344 26 329 7.22e-42 149
Msa1424280 MtrunA17_Chr1g0162361 32.131 305 176 8 61 344 27 321 8.45e-42 149
Msa1424280 MtrunA17_Chr2g0314381 29.073 313 201 7 61 361 77 380 1.02e-41 150
Msa1424280 MtrunA17_Chr5g0420941 29.799 349 212 9 24 356 10 341 1.79e-41 148
Msa1424280 MtrunA17_Chr5g0423221 29.688 320 203 9 54 361 64 373 2.26e-41 149
Msa1424280 MtrunA17_Chr5g0420901 29.769 346 216 11 24 356 11 342 2.64e-41 148
Msa1424280 MtrunA17_Chr1g0162321 32.155 283 161 6 73 334 92 364 2.90e-41 149
Msa1424280 MtrunA17_Chr5g0423201 30.946 349 209 12 24 356 12 344 4.80e-41 147
Msa1424280 MtrunA17_Chr2g0332191 31.348 319 187 10 59 359 50 354 8.13e-41 147
Msa1424280 MtrunA17_Chr5g0437181 30.990 313 197 6 61 360 49 355 2.42e-40 145
Msa1424280 MtrunA17_Chr2g0319491 30.034 293 171 8 61 340 33 304 6.00e-40 144
Msa1424280 MtrunA17_Chr8g0371921 32.184 261 164 5 56 304 33 292 7.94e-40 144
Msa1424280 MtrunA17_Chr3g0113641 30.351 313 199 6 61 360 50 356 1.01e-39 144
Msa1424280 MtrunA17_Chr3g0121141 30.492 305 174 12 61 348 4 287 1.02e-39 142
Msa1424280 MtrunA17_Chr3g0125201 31.698 265 148 8 60 305 2 252 1.20e-39 142
Msa1424280 MtrunA17_Chr4g0045411 29.607 331 194 9 60 361 29 349 1.37e-39 143
Msa1424280 MtrunA17_Chr1g0168001 41.667 180 86 6 1 169 1 172 1.55e-39 138
Msa1424280 MtrunA17_Chr8g0375681 31.228 285 169 9 90 361 15 285 9.25e-39 139
Msa1424280 MtrunA17_Chr1g0162191 29.097 299 185 7 53 336 39 325 1.83e-38 140
Msa1424280 MtrunA17_Chr2g0311751 50.758 132 58 2 45 169 9 140 1.83e-38 135
Msa1424280 MtrunA17_Chr4g0045471 29.452 292 176 7 74 344 48 330 1.71e-37 138
Msa1424280 MtrunA17_Chr5g0423211 28.736 348 219 11 24 356 12 345 3.79e-37 137
Msa1424280 MtrunA17_Chr1g0167921 51.667 120 52 1 170 283 50 169 3.39e-36 129
Msa1424280 MtrunA17_Chr7g0239821 27.778 306 202 9 59 354 62 358 6.36e-36 134
Msa1424280 MtrunA17_Chr5g0405411 29.811 265 179 3 46 304 29 292 8.75e-36 133
Msa1424280 MtrunA17_Chr5g0420721 32.627 236 132 8 136 356 22 245 9.07e-36 131
Msa1424280 MtrunA17_Chr2g0289341 29.119 261 161 6 57 305 3 251 1.48e-35 132
Msa1424280 MtrunA17_Chr3g0087031 29.775 356 196 16 29 350 15 350 2.27e-35 132
Msa1424280 MtrunA17_Chr7g0239111 27.797 295 196 8 59 344 53 339 9.65e-35 130
Msa1424280 MtrunA17_Chr7g0239101 27.778 306 202 8 59 354 53 349 1.08e-34 130
Msa1424280 MtrunA17_Chr5g0424201 29.755 326 196 8 34 342 18 327 1.93e-34 129
Msa1424280 MtrunA17_Chr2g0285931 29.904 311 183 11 61 351 28 323 2.16e-34 129
Msa1424280 MtrunA17_Chr4g0064781 28.758 306 204 6 37 336 28 325 4.28e-34 129
Msa1424280 MtrunA17_Chr4g0045461 31.126 302 171 6 61 334 26 318 2.65e-33 127
Msa1424280 MtrunA17_Chr8g0370711 29.642 307 196 9 55 349 47 345 2.87e-33 126
Msa1424280 MtrunA17_Chr5g0398291 29.758 289 175 8 61 330 47 326 4.31e-33 126
Msa1424280 MtrunA17_Chr8g0370721 30.645 310 189 11 55 349 47 345 5.54e-33 125
Msa1424280 MtrunA17_Chr3g0145171 27.907 301 198 9 61 349 52 345 6.26e-33 125
Msa1424280 MtrunA17_Chr1g0204181 29.373 303 183 5 61 342 59 351 1.08e-32 125
Msa1424280 MtrunA17_Chr2g0296371 25.749 334 206 8 45 356 38 351 4.09e-32 124
Msa1424280 MtrunA17_Chr3g0126761 39.157 166 94 3 167 330 42 202 5.55e-32 120
Msa1424280 MtrunA17_Chr5g0424211 29.073 313 195 8 34 331 16 316 7.72e-32 122
Msa1424280 MtrunA17_Chr7g0239121 26.471 306 207 8 59 354 49 346 1.25e-31 122
Msa1424280 MtrunA17_Chr1g0148771 29.630 324 180 12 54 357 56 351 2.99e-31 121
Msa1424280 MtrunA17_Chr6g0474391 28.105 306 194 6 61 346 64 363 2.29e-30 119
Msa1424280 MtrunA17_Chr7g0239091 25.926 297 201 7 61 352 160 442 1.22e-29 118
Msa1424280 MtrunA17_Chr8g0358941 29.141 326 175 13 59 353 25 325 1.27e-29 116
Msa1424280 MtrunA17_Chr7g0232161 30.962 239 151 7 61 289 60 294 3.40e-29 115
Msa1424280 MtrunA17_Chr2g0313111 28.481 316 181 14 59 353 26 317 7.82e-29 114
Msa1424280 MtrunA17_Chr4g0068891 29.568 301 185 11 61 347 20 307 1.49e-28 113
Msa1424280 MtrunA17_Chr8g0351101 28.614 339 202 9 27 342 24 345 2.19e-28 114
Msa1424280 MtrunA17_Chr3g0130391 28.931 318 184 10 62 351 67 370 6.87e-28 112
Msa1424280 MtrunA17_Chr6g0488511 27.413 259 167 8 60 305 2 252 9.42e-28 110
Msa1424280 MtrunA17_Chr1g0191201 27.698 278 180 6 78 342 76 345 1.10e-27 112
Msa1424280 MtrunA17_Chr1g0194321 28.363 342 191 13 53 361 12 332 1.37e-27 111
Msa1424280 MtrunA17_Chr3g0092531 29.455 275 170 6 75 340 27 286 2.09e-27 110
Msa1424280 MtrunA17_Chr3g0125421 30.537 298 157 11 78 346 59 335 2.72e-27 110
Msa1424280 MtrunA17_Chr3g0145181 29.836 305 192 11 52 342 41 337 9.48e-27 108
Msa1424280 MtrunA17_Chr3g0114871 30.315 254 159 6 36 277 18 265 1.81e-26 106
Msa1424280 MtrunA17_Chr5g0420881 34.694 147 90 2 216 361 3 144 2.03e-26 102
Msa1424280 MtrunA17_Chr2g0314371 27.931 290 167 8 61 315 52 334 2.84e-26 107
Msa1424280 MtrunA17_Chr5g0407731 28.521 284 187 8 61 340 33 304 3.50e-26 107
Msa1424280 MtrunA17_Chr5g0407781 28.102 274 142 7 60 307 4 248 3.65e-26 106
Msa1424280 MtrunA17_Chr8g0348951 30.769 260 163 7 58 305 7 261 2.12e-25 104
Msa1424280 MtrunA17_Chr3g0114861 29.066 289 190 6 60 340 39 320 2.46e-25 104
Msa1424280 MtrunA17_Chr3g0145201 28.727 275 179 8 77 342 706 972 2.96e-25 107
Msa1424280 MtrunA17_Chr7g0239071 25.524 286 190 7 78 352 19 292 5.52e-25 103
Msa1424280 MtrunA17_Chr7g0247741 30.827 266 164 7 53 305 3 261 5.63e-25 103
Msa1424280 MtrunA17_Chr5g0394071 33.721 172 99 2 171 340 4 162 6.24e-25 100
Msa1424280 MtrunA17_Chr4g0052251 26.347 334 206 13 39 353 13 325 1.26e-23 99.8
Msa1424280 MtrunA17_Chr3g0105281 27.273 297 165 9 61 324 34 312 1.75e-23 99.4
Msa1424280 MtrunA17_Chr1g0170631 30.899 178 115 3 167 342 1 172 2.36e-23 96.3
Msa1424280 MtrunA17_Chr4g0075471 42.222 90 51 1 217 305 32 121 5.81e-23 94.0
Msa1424280 MtrunA17_Chr4g0037611 33.766 154 84 2 189 324 11 164 1.48e-22 93.6
Msa1424280 MtrunA17_Chr1g0161101 38.509 161 85 3 162 321 354 501 2.20e-22 98.2
Msa1424280 MtrunA17_Chr8g0384481 33.810 210 118 7 146 341 145 347 6.13e-22 95.9
Msa1424280 MtrunA17_Chr6g0486831 25.000 360 171 13 46 346 6 325 1.18e-21 94.4
Msa1424280 MtrunA17_Chr8g0336841 51.250 80 37 1 277 356 9 86 2.25e-21 87.4
Msa1424280 MtrunA17_Chr7g0233661 32.215 149 86 2 194 340 1 136 2.20e-20 87.0
Msa1424280 MtrunA17_Chr8g0384461 25.212 353 211 10 21 342 7 337 2.25e-20 91.3
Msa1424280 MtrunA17_Chr1g0158011 31.282 195 125 5 171 361 72 261 3.20e-20 89.0
Msa1424280 MtrunA17_Chr4g0064771 32.544 169 107 4 170 336 27 190 4.30e-19 84.7
Msa1424280 MtrunA17_Chr2g0311611 49.275 69 28 1 216 277 3 71 4.80e-19 80.5
Msa1424280 MtrunA17_Chr2g0293931 34.028 144 83 5 172 304 10 152 7.07e-19 84.0
Msa1424280 MtrunA17_Chr3g0092581 33.333 162 98 5 182 340 4 158 9.09e-19 83.2
Msa1424280 MtrunA17_Chr7g0252371 58.537 82 33 1 174 254 3 84 3.83e-18 79.3
Msa1424280 MtrunA17_Chr8g0389941 24.841 314 201 10 64 351 37 341 6.02e-18 84.0
Msa1424280 MtrunA17_Chr4g0055911 25.490 306 200 10 60 346 8 304 1.55e-17 82.4
Msa1424280 MtrunA17_Chr7g0219991 38.318 107 64 2 170 275 249 354 2.29e-17 82.4
Msa1424280 MtrunA17_Chr2g0311821 50.000 84 36 2 71 152 22 101 2.38e-17 77.8
Msa1424280 MtrunA17_Chr4g0053251 26.019 319 204 8 57 345 4 320 1.03e-16 80.1
Msa1424280 MtrunA17_Chr2g0319521 32.110 109 74 0 169 277 16 124 1.38e-16 75.9
Msa1424280 MtrunA17_Chr4g0055871 25.085 295 188 11 61 336 9 289 1.39e-16 79.7
Msa1424280 MtrunA17_Chr1g0158021 24.201 219 150 8 61 269 49 261 4.27e-15 74.3
Msa1424280 MtrunA17_Chr3g0138351 23.248 314 197 8 61 347 7 303 1.21e-13 70.9
Msa1424280 MtrunA17_Chr8g0375581 37.209 86 53 1 190 274 1 86 2.37e-13 65.1
Msa1424280 MtrunA17_Chr4g0009541 25.000 292 200 10 73 354 26 308 6.54e-12 65.9
Msa1424280 MtrunA17_Chr2g0311621 31.579 95 65 0 24 118 21 115 1.14e-11 61.2
Msa1424280 MtrunA17_Chr4g0009561 23.529 323 194 14 57 347 3 304 3.22e-11 63.5
Msa1424280 MtrunA17_Chr5g0407591 37.931 87 49 2 257 343 7 88 3.71e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1424280 AT1G06620.1 53.825 366 160 4 2 361 3 365 2.25e-140 403
Msa1424280 AT5G59540.1 50.992 353 164 4 16 361 16 366 4.16e-127 369
Msa1424280 AT1G06650.2 49.167 360 172 4 11 361 12 369 3.24e-126 367
Msa1424280 AT2G30830.1 49.441 358 168 4 11 361 7 358 1.11e-125 365
Msa1424280 AT2G30840.1 49.304 359 171 3 11 361 7 362 1.05e-121 355
Msa1424280 AT3G61400.1 48.780 369 173 6 1 356 1 366 1.50e-121 355
Msa1424280 AT5G59530.1 51.136 352 154 8 16 356 15 359 2.08e-121 355
Msa1424280 AT1G03400.1 50.292 342 162 5 11 350 6 341 3.83e-121 353
Msa1424280 AT1G04350.1 49.575 353 172 4 13 361 10 360 6.30e-121 353
Msa1424280 AT1G03410.2 50.140 357 164 6 8 354 3 355 1.52e-120 352
Msa1424280 AT1G06640.1 49.030 361 171 5 11 361 12 369 1.71e-120 353
Msa1424280 AT1G03410.1 50.140 357 164 6 8 354 40 392 6.71e-120 352
Msa1424280 AT5G43450.1 50.445 337 161 4 15 347 14 348 2.60e-117 344
Msa1424280 AT2G25450.1 48.045 358 174 7 11 361 7 359 8.78e-117 343
Msa1424280 AT1G04380.1 51.385 325 151 4 34 356 21 340 3.71e-116 341
Msa1424280 AT5G43440.1 48.451 355 174 5 14 361 13 365 1.14e-115 340
Msa1424280 AT2G30840.3 47.911 359 170 4 11 361 7 356 2.18e-115 339
Msa1424280 AT1G06645.1 47.222 360 176 5 11 361 25 379 1.39e-114 338
Msa1424280 AT1G03400.2 46.070 369 165 4 11 350 6 369 1.95e-114 338
Msa1424280 AT1G06620.2 54.093 281 122 3 2 276 3 282 2.29e-107 316
Msa1424280 AT1G06650.1 49.455 275 131 2 11 277 12 286 2.97e-97 291
Msa1424280 AT3G61400.2 48.443 289 136 4 1 277 1 288 1.93e-94 283
Msa1424280 AT5G59540.2 50.929 269 125 3 16 277 16 284 2.22e-94 283
Msa1424280 AT5G43450.2 49.817 273 133 2 15 283 14 286 3.39e-94 283
Msa1424280 AT1G06640.2 49.818 275 128 3 11 276 12 285 5.63e-92 278
Msa1424280 AT1G06640.3 49.275 276 130 3 11 277 12 286 5.32e-91 275
Msa1424280 AT2G30840.2 48.718 273 133 1 11 276 7 279 3.51e-90 273
Msa1424280 AT5G43440.2 48.727 275 134 4 14 281 13 287 1.98e-89 271
Msa1424280 AT1G04380.2 49.194 248 121 3 34 279 21 265 3.14e-83 254
Msa1424280 AT3G13610.1 34.211 342 205 7 24 356 26 356 8.54e-62 202
Msa1424280 AT1G55290.1 33.236 343 208 6 24 356 25 356 5.32e-61 200
Msa1424280 AT5G24530.1 35.714 308 186 5 56 356 33 335 6.50e-59 194
Msa1424280 AT4G10500.1 34.185 313 194 4 55 360 38 345 2.02e-58 193
Msa1424280 AT4G10490.1 32.476 311 193 6 60 360 41 344 9.33e-58 191
Msa1424280 AT3G12900.1 31.751 337 220 6 24 356 21 351 1.42e-54 183
Msa1424280 AT2G36690.2 32.840 338 199 8 22 342 18 344 4.58e-50 172
Msa1424280 AT2G36690.1 32.840 338 199 8 22 342 18 344 4.58e-50 172
Msa1424280 AT4G16330.2 31.803 305 189 8 60 356 66 359 2.05e-47 165
Msa1424280 AT2G44800.1 31.988 347 215 10 10 345 1 337 3.16e-45 159
Msa1424280 AT5G05600.1 29.282 362 230 9 9 354 11 362 7.05e-43 153
Msa1424280 AT2G38240.1 29.882 338 220 9 25 352 12 342 1.28e-42 152
Msa1424280 AT1G17020.1 29.429 333 209 10 46 361 35 358 2.11e-42 151
Msa1424280 AT3G51240.1 33.725 255 157 4 61 304 38 291 8.40e-42 150
Msa1424280 AT4G25310.1 31.142 289 182 8 75 356 70 348 1.27e-41 149
Msa1424280 AT3G19000.1 32.000 300 168 8 61 334 32 321 5.09e-41 147
Msa1424280 AT3G11180.1 30.702 342 219 7 25 354 56 391 6.14e-41 148
Msa1424280 AT3G11180.2 31.402 328 207 7 25 340 56 377 1.26e-40 147
Msa1424280 AT4G25300.1 28.947 342 220 11 33 361 25 356 1.59e-40 146
Msa1424280 AT3G60290.1 30.523 344 219 9 10 342 1 335 2.39e-40 146
Msa1424280 AT4G21200.1 30.952 294 168 9 61 341 42 313 1.64e-39 143
Msa1424280 AT1G78550.1 27.405 343 223 8 28 356 21 351 3.34e-39 143
Msa1424280 AT1G17010.1 27.666 347 229 7 28 361 21 358 3.48e-39 143
Msa1424280 AT1G77330.1 31.923 260 156 7 60 305 2 254 8.28e-39 140
Msa1424280 AT3G55970.1 29.942 344 208 10 16 337 5 337 2.03e-38 141
Msa1424280 AT1G05010.1 32.308 260 152 10 60 305 3 252 4.35e-37 136
Msa1424280 AT4G22880.1 30.392 306 179 8 25 304 7 304 1.43e-36 135
Msa1424280 AT4G22880.2 30.392 306 179 8 25 304 7 304 1.43e-36 135
Msa1424280 AT4G22880.3 30.392 306 179 8 25 304 7 304 1.43e-36 135
Msa1424280 AT5G08640.2 29.693 293 184 7 60 340 42 324 3.22e-36 134
Msa1424280 AT5G08640.1 29.693 293 184 7 60 340 42 324 3.22e-36 134
Msa1424280 AT1G15550.1 30.097 309 182 10 51 342 47 338 3.53e-36 135
Msa1424280 AT1G50960.1 30.592 304 154 9 34 304 9 288 7.53e-36 133
Msa1424280 AT5G07480.1 30.033 303 191 8 55 342 38 334 1.55e-35 133
Msa1424280 AT3G21420.1 28.939 311 198 9 61 356 55 357 2.90e-35 132
Msa1424280 AT1G12010.1 29.615 260 156 8 61 305 7 254 4.06e-35 131
Msa1424280 AT3G19010.1 28.571 308 184 9 55 334 17 316 5.72e-35 131
Msa1424280 AT3G19010.4 28.571 308 184 9 55 334 17 316 5.72e-35 131
Msa1424280 AT4G16330.1 33.182 220 134 5 141 356 43 253 6.80e-35 129
Msa1424280 AT1G62380.1 30.315 254 162 8 61 305 7 254 9.99e-35 130
Msa1424280 AT5G12270.1 26.912 353 238 9 20 361 16 359 1.11e-34 130
Msa1424280 AT5G63590.1 31.104 299 171 9 61 340 14 296 1.37e-34 129
Msa1424280 AT1G80330.1 31.229 301 183 8 60 346 48 338 1.89e-33 127
Msa1424280 AT4G25420.1 29.195 298 189 4 61 342 61 352 1.54e-32 125
Msa1424280 AT3G19000.2 31.276 243 136 7 61 277 32 269 2.08e-32 122
Msa1424280 AT1G78550.2 27.500 280 182 6 87 356 5 273 1.09e-31 120
Msa1424280 AT3G51240.2 33.880 183 115 2 128 304 25 207 2.02e-31 120
Msa1424280 AT5G63600.1 28.808 302 193 7 61 355 33 319 4.19e-31 120
Msa1424280 AT5G05600.2 29.825 285 179 8 9 277 11 290 4.60e-31 119
Msa1424280 AT1G30040.1 26.837 313 202 8 57 351 19 322 6.65e-31 120
Msa1424280 AT1G78440.1 27.329 322 192 10 55 353 12 314 9.73e-31 119
Msa1424280 AT2G19590.1 30.859 256 157 10 61 305 11 257 2.08e-30 118
Msa1424280 AT5G20400.1 28.239 301 198 7 61 349 45 339 2.26e-30 119
Msa1424280 AT1G80340.1 29.102 323 193 9 43 344 26 333 4.96e-30 118
Msa1424280 AT5G63600.2 28.713 303 193 8 61 355 33 320 1.08e-29 116
Msa1424280 AT1G60980.1 28.767 365 197 17 11 339 17 354 1.15e-29 117
Msa1424280 AT4G25310.2 28.472 288 163 9 75 356 70 320 3.97e-29 115
Msa1424280 AT3G55970.2 29.537 281 176 8 16 277 5 282 6.52e-29 114
Msa1424280 AT5G63595.1 29.389 262 152 7 47 300 13 249 1.09e-28 113
Msa1424280 AT5G20550.1 28.289 304 195 10 61 349 45 340 1.51e-28 114
Msa1424280 AT3G19010.3 27.852 298 169 11 55 334 17 286 1.72e-28 113
Msa1424280 AT5G07200.1 30.112 269 155 9 61 304 58 318 1.75e-28 114
Msa1424280 AT4G25300.2 32.821 195 124 4 169 361 73 262 4.73e-28 110
Msa1424280 AT4G25420.2 30.043 233 146 3 61 277 61 292 1.59e-26 107
Msa1424280 AT1G49390.1 26.910 301 202 8 61 349 45 339 4.88e-26 107
Msa1424280 AT5G51810.1 26.871 294 197 4 61 342 63 350 1.71e-25 106
Msa1424280 AT2G34555.1 29.674 337 189 14 37 351 7 317 2.54e-25 105
Msa1424280 AT1G47990.1 30.619 307 177 12 61 347 15 305 3.99e-25 104
Msa1424280 AT3G47190.1 28.065 310 168 12 45 322 17 303 7.62e-25 103
Msa1424280 AT2G19590.2 30.973 226 139 9 88 305 26 242 1.63e-24 102
Msa1424280 AT5G58660.1 26.573 286 173 8 61 316 34 312 5.01e-24 101
Msa1424280 AT5G54000.2 27.113 284 194 6 73 349 63 340 6.94e-24 101
Msa1424280 AT3G19010.2 27.165 254 154 8 55 280 17 267 7.08e-24 100
Msa1424280 AT5G63580.2 32.444 225 135 7 60 273 18 236 9.73e-24 98.6
Msa1424280 AT4G21690.1 26.524 328 201 12 50 356 36 344 1.56e-23 100
Msa1424280 AT5G63580.1 32.444 225 135 7 60 273 18 236 1.62e-23 98.2
Msa1424280 AT1G14130.1 24.662 296 191 9 55 337 3 279 5.12e-23 98.2
Msa1424280 AT4G23340.1 28.231 294 188 10 61 342 10 292 1.34e-22 97.4
Msa1424280 AT1G30040.2 26.423 246 145 8 57 277 19 253 1.54e-21 93.2
Msa1424280 AT1G49390.2 26.316 266 183 7 91 349 1 260 1.80e-21 93.2
Msa1424280 AT5G07480.2 29.130 230 147 7 123 342 2 225 1.81e-21 92.4
Msa1424280 AT5G51810.2 27.586 232 155 3 61 280 63 293 1.91e-21 93.6
Msa1424280 AT1G14120.2 25.862 290 183 10 61 337 8 278 3.47e-21 93.2
Msa1424280 AT1G14120.1 25.862 290 183 10 61 337 8 278 3.47e-21 93.2
Msa1424280 AT1G14120.3 25.862 290 183 10 61 337 8 278 3.47e-21 93.2
Msa1424280 AT5G54000.1 26.692 266 182 6 91 349 1 260 4.59e-20 89.0
Msa1424280 AT5G43935.1 25.000 296 173 9 61 340 19 281 5.78e-20 89.4
Msa1424280 AT1G44090.1 27.653 311 176 12 61 341 63 354 6.52e-20 90.5
Msa1424280 AT5G58660.2 25.911 247 147 7 61 277 34 274 2.25e-18 84.7
Msa1424280 AT1G02400.1 27.245 323 193 15 46 347 14 315 4.25e-18 84.7
Msa1424280 AT3G46500.5 26.154 325 206 11 44 346 1 313 4.14e-17 81.6
Msa1424280 AT5G51310.1 25.843 267 169 7 61 305 5 264 2.86e-16 79.3
Msa1424280 AT4G23340.2 32.184 174 108 6 172 342 8 174 3.58e-16 76.6
Msa1424280 AT1G52820.1 24.232 293 196 9 78 360 36 312 6.45e-15 75.1
Msa1424280 AT2G06960.1 34.848 132 67 4 217 348 33 145 1.66e-13 67.8
Msa1424280 AT1G35190.1 26.642 274 168 8 59 304 10 278 2.76e-13 70.5
Msa1424280 AT3G46500.10 28.788 198 122 7 159 346 51 239 1.63e-12 67.4
Msa1424280 AT3G46500.1 28.788 198 122 7 159 346 51 239 1.63e-12 67.4
Msa1424280 AT3G46500.4 29.189 185 113 6 172 346 1 177 1.71e-12 65.9
Msa1424280 AT4G16765.3 27.586 174 111 6 169 333 60 227 1.06e-11 64.7
Msa1424280 AT4G16765.6 27.513 189 124 6 169 347 60 245 2.49e-11 63.5
Msa1424280 AT4G16765.1 27.513 189 124 6 169 347 60 245 2.49e-11 63.5
Msa1424280 AT4G16765.2 27.513 189 124 6 169 347 60 245 2.49e-11 63.5
Msa1424280 AT3G50210.2 28.758 153 98 5 160 305 55 203 9.53e-11 62.0

Find 93 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTTATCTCTTGAGTAAA+AGG 0.149609 tig0025655:-37443 None:intergenic
TCTGTTAACAATTCCTTTAT+TGG 0.183749 tig0025655:-41433 None:intergenic
CATACTATTGGTATCTCTTC+TGG 0.195656 tig0025655:-37565 None:intergenic
GGAGCTCTTGTTGTAAATAT+TGG 0.201924 tig0025655:+40192 Msa1424280:CDS
TATACTATATTTAATTAGTT+TGG 0.228100 tig0025655:+41708 Msa1424280:three_prime_UTR
GATTCCAAAACTGGTGTAAA+AGG 0.232362 tig0025655:+37142 Msa1424280:CDS
TCTCTAATGGGAAGTTGTTT+AGG 0.233537 tig0025655:+37482 Msa1424280:CDS
AAAGTTAGGTATTTCTCTAA+TGG 0.259177 tig0025655:+37469 Msa1424280:CDS
GAGCTCTTGTTGTAAATATT+GGG 0.262189 tig0025655:+40193 Msa1424280:CDS
CAGCACATTCCATTTCATTA+AGG 0.281915 tig0025655:-39999 None:intergenic
CTCTAATGGGAAGTTGTTTA+GGG 0.283452 tig0025655:+37483 Msa1424280:CDS
TTCTAATGATGCCATAGTTT+TGG 0.287336 tig0025655:-37077 None:intergenic
TCAATCAACTCAAAATAAAT+TGG 0.288765 tig0025655:-41677 None:intergenic
TGGTATTCCACTTCATGTTT+TGG 0.295034 tig0025655:+37363 Msa1424280:CDS
CATCTGCTTCACAACTTTAA+CGG 0.295899 tig0025655:-41547 None:intergenic
TCTTGGAAGCATTCTTGATT+TGG 0.301866 tig0025655:-37312 None:intergenic
CCCCGAACCTGAGTTAACTA+TGG 0.305311 tig0025655:+40059 Msa1424280:CDS
CCCATAGTTAACTCAGGTTC+GGG 0.305478 tig0025655:-40060 None:intergenic
TTAGGGACATGGCTGCTAAT+TGG 0.316905 tig0025655:+37500 Msa1424280:CDS
TCAAGAATGCTTCCAAGAAC+TGG 0.320842 tig0025655:+37317 Msa1424280:CDS
GCATTTGATGATTCCAAAAC+TGG 0.328463 tig0025655:+37133 Msa1424280:CDS
AAGAAAACCCTCCAATCTAT+AGG 0.335299 tig0025655:+41455 Msa1424280:CDS
GAGATAAAGATAAGAAAGTT+AGG 0.357106 tig0025655:+37455 Msa1424280:CDS
TCTTTCTTACCTTAATGAAA+TGG 0.361413 tig0025655:+39990 Msa1424280:CDS
ACTGAATTTCTATGAATTAG+TGG 0.362034 tig0025655:-36926 None:intergenic
ATACTTCTTCAAAATCAAAT+AGG 0.364008 tig0025655:+40117 Msa1424280:CDS
TCTTCTGGATTGGGAAGATC+AGG 0.374718 tig0025655:-37550 None:intergenic
TATTATGCAAAAGGCATTGC+TGG 0.382691 tig0025655:+41508 Msa1424280:CDS
TCCCATAGTTAACTCAGGTT+CGG 0.383078 tig0025655:-40061 None:intergenic
CCTGAGTTAACTATGGGAAT+TGG 0.393784 tig0025655:+40066 Msa1424280:CDS
AGATGATCAATGGAATTTGT+AGG 0.399507 tig0025655:+37389 Msa1424280:CDS
TATCCACAGCTCCAAAACTA+TGG 0.401193 tig0025655:+37066 Msa1424280:exon
AAGTTAGGTATTTCTCTAAT+GGG 0.405017 tig0025655:+37470 Msa1424280:CDS
TATTGGTATCTCTTCTGGAT+TGG 0.406900 tig0025655:-37560 None:intergenic
ATAGTAATATCCCTATAGAT+TGG 0.407931 tig0025655:-41466 None:intergenic
ATTGGTATCTCTTCTGGATT+GGG 0.410141 tig0025655:-37559 None:intergenic
AGAAAACCCTCCAATCTATA+GGG 0.413831 tig0025655:+41456 Msa1424280:CDS
TTGACAAATTATTATGCAAA+AGG 0.417349 tig0025655:+41499 Msa1424280:CDS
GTAAAAGGTATACTAGATTC+TGG 0.426090 tig0025655:+37157 Msa1424280:CDS
GAACATTACCTGCATACTAT+TGG 0.433323 tig0025655:-37577 None:intergenic
TGCTGAAGCACTTTATATCA+TGG 0.441493 tig0025655:+40017 Msa1424280:CDS
GAGTTATTGTCAGAAGCTCT+TGG 0.442551 tig0025655:+39961 Msa1424280:CDS
AAGGTTGCTACAGATATTCT+AGG 0.446873 tig0025655:-41364 None:intergenic
GATGGGGATGGTGGTGAAGT+TGG 0.456154 tig0025655:-37251 None:intergenic
TCTTTATCTCTTGAGTAAAA+GGG 0.460610 tig0025655:-37442 None:intergenic
TTGAAGAAGTATTGTCATGA+AGG 0.471325 tig0025655:-40106 None:intergenic
CATTAAGGTAAGAAAGATTG+AGG 0.478852 tig0025655:-39984 None:intergenic
TTCAAAACAAGTAAAAGCAT+TGG 0.479034 tig0025655:+39924 Msa1424280:CDS
GAATACCATGATTGATCACT+TGG 0.479795 tig0025655:-37348 None:intergenic
TCAAAACAAGTAAAAGCATT+GGG 0.480528 tig0025655:+39925 Msa1424280:CDS
GATGTGTTGAAGATCTATGA+TGG 0.486480 tig0025655:-37269 None:intergenic
ATCTCATCCAAAACATGAAG+TGG 0.487678 tig0025655:-37370 None:intergenic
TGATTTCAATATATGAAAGC+TGG 0.490767 tig0025655:-41745 None:intergenic
CAAGAATGCTTCCAAGAACT+GGG 0.492609 tig0025655:+37318 Msa1424280:CDS
AAGTTCTTCATGAGAACCAA+TGG 0.503137 tig0025655:+40148 Msa1424280:CDS
TATAGTAAAATTCATAAAGA+AGG 0.506246 tig0025655:-41383 None:intergenic
GGGACATGGCTGCTAATTGG+AGG 0.507047 tig0025655:+37503 Msa1424280:CDS
AAAGTTGTGAAGCAGATGTA+AGG 0.512022 tig0025655:+41552 Msa1424280:exon
GACAAGGTTGCTATGGTGAA+TGG 0.517413 tig0025655:-37031 None:intergenic
CCAATTCCCATAGTTAACTC+AGG 0.517642 tig0025655:-40066 None:intergenic
AATTGAAGACAAGGTTGCTA+TGG 0.529492 tig0025655:-37038 None:intergenic
GTGTATTTGTAGAGATATTG+TGG 0.538778 tig0025655:+39894 Msa1424280:intron
CGGGTGTTGTCAAGGAATAT+AGG 0.542587 tig0025655:+41340 Msa1424280:CDS
CTTCTGGATTGGGAAGATCA+GGG 0.546286 tig0025655:-37549 None:intergenic
ACAACAAGAGCTCCGTGCAC+TGG 0.549420 tig0025655:-40183 None:intergenic
AAATATTGGGGATATCCTAC+AGG 0.550323 tig0025655:+40206 Msa1424280:CDS
AGTTCTTCATGAGAACCAAT+GGG 0.552016 tig0025655:+40149 Msa1424280:CDS
CATTCATCAGTGTTAATCAC+CGG 0.552123 tig0025655:+41320 Msa1424280:CDS
AAGAGATACCAATAGTATGC+AGG 0.552701 tig0025655:+37569 Msa1424280:CDS
TGGGAAGTTGTTTAGGGACA+TGG 0.554684 tig0025655:+37489 Msa1424280:CDS
CTATATTCCTTGACAACACC+CGG 0.556850 tig0025655:-41339 None:intergenic
TAATATCCCTATAGATTGGA+GGG 0.558690 tig0025655:-41462 None:intergenic
AAGATCTATGATGGGGATGG+TGG 0.562439 tig0025655:-37260 None:intergenic
CCCGAACCTGAGTTAACTAT+GGG 0.570034 tig0025655:+40060 Msa1424280:CDS
TTAATCACCGGGTGTTGTCA+AGG 0.573163 tig0025655:+41332 Msa1424280:CDS
GCTGAAGCACTTTATATCAT+GGG 0.576961 tig0025655:+40018 Msa1424280:CDS
ATGTGTTGAAGATCTATGAT+GGG 0.577444 tig0025655:-37268 None:intergenic
GTAATATCCCTATAGATTGG+AGG 0.581918 tig0025655:-41463 None:intergenic
AGCTCTTGTTGTAAATATTG+GGG 0.583098 tig0025655:+40194 Msa1424280:CDS
CTGGTGGAACATTGACCCAT+TGG 0.594414 tig0025655:-40164 None:intergenic
AACTCAGGTTCGGGGCATTG+TGG 0.597309 tig0025655:-40051 None:intergenic
GTCAATGTTCCACCAGTGCA+CGG 0.601495 tig0025655:+40171 Msa1424280:CDS
GTGAAGTTGGACTCATCAGT+AGG 0.617901 tig0025655:-37238 None:intergenic
ACAAGAGCTCCGTGCACTGG+TGG 0.621847 tig0025655:-40180 None:intergenic
CTTCTTCAAAATCAAATAGG+TGG 0.624190 tig0025655:+40120 Msa1424280:CDS
GGACATGGCTGCTAATTGGA+GGG 0.640115 tig0025655:+37504 Msa1424280:CDS
TTGAAGATCTATGATGGGGA+TGG 0.644460 tig0025655:-37263 None:intergenic
ATTCATCAGTGTTAATCACC+GGG 0.652154 tig0025655:+41321 Msa1424280:CDS
CCATAGTTAACTCAGGTTCG+GGG 0.682315 tig0025655:-40059 None:intergenic
AAGAATGCTTCCAAGAACTG+GGG 0.698663 tig0025655:+37319 Msa1424280:CDS
GATATGAACAATTGAAGACA+AGG 0.717787 tig0025655:-37047 None:intergenic
GTGAATGGATTGTAACAGAG+TGG 0.750797 tig0025655:-37016 None:intergenic
TGTGTTGAAGATCTATGATG+GGG 0.761699 tig0025655:-37267 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTATTTTTTTTAGATTTAAT+AGG - tig0025655:36972-36991 None:intergenic 10.0%
!!! ATTTAAATAGTAAGTTTTTA+TGG + tig0025655:38301-38320 Msa1424280:intron 10.0%
!!! TAATGAATAATTTCTTATTT+TGG + tig0025655:38370-38389 Msa1424280:intron 10.0%
!!! TTAAATAAATTAGTTTAAAC+AGG - tig0025655:40509-40528 None:intergenic 10.0%
!! TATACTATATTTAATTAGTT+TGG + tig0025655:41708-41727 Msa1424280:three_prime_UTR 10.0%
!! TATTTACTTATGTTGAAATT+CGG - tig0025655:37885-37904 None:intergenic 15.0%
!! TTTCAACATAAGTAAATAAA+AGG + tig0025655:37887-37906 Msa1424280:intron 15.0%
!! TATCAGTTATAATAGAAATT+TGG - tig0025655:38178-38197 None:intergenic 15.0%
!! TTCTATTATAACTGATAATT+TGG + tig0025655:38181-38200 Msa1424280:intron 15.0%
!!! GATTTTGTTATTTTAAACAA+GGG - tig0025655:38435-38454 None:intergenic 15.0%
!!! AGATTTTGTTATTTTAAACA+AGG - tig0025655:38436-38455 None:intergenic 15.0%
!! ATGATTAAATATTTCAACAA+AGG - tig0025655:39645-39664 None:intergenic 15.0%
!! ATACATCTTAAACTTATATA+AGG - tig0025655:40293-40312 None:intergenic 15.0%
!!! AATCATCAAAATTTAAAGTA+TGG + tig0025655:40362-40381 Msa1424280:intron 15.0%
!! TCCTTTATATAAAATTTCAA+AGG + tig0025655:41149-41168 Msa1424280:intron 15.0%
!! CCTTTATATAAAATTTCAAA+GGG + tig0025655:41150-41169 Msa1424280:intron 15.0%
!! TATAGTAAAATTCATAAAGA+AGG - tig0025655:41386-41405 None:intergenic 15.0%
!!! ATAAATAGAAGACTTTTGTA+AGG - tig0025655:37602-37621 None:intergenic 20.0%
!!! AAAATCATAATGTTCGATTT+TGG - tig0025655:38239-38258 None:intergenic 20.0%
!!! AATCGAACATTATGATTTTT+AGG + tig0025655:38240-38259 Msa1424280:intron 20.0%
!!! ATCGAACATTATGATTTTTA+GGG + tig0025655:38241-38260 Msa1424280:intron 20.0%
!!! AGAAGATTTTGTTTCATTTT+CGG - tig0025655:38849-38868 None:intergenic 20.0%
!! ATCCTAATTCTGATTATTAT+TGG - tig0025655:39439-39458 None:intergenic 20.0%
!! ATAATAATCAGAATTAGGAT+CGG + tig0025655:39439-39458 Msa1424280:intron 20.0%
!! CATAAAATCAAATAGTATTG+AGG - tig0025655:39674-39693 None:intergenic 20.0%
!! TACAATTAAGAAGTGATTTA+AGG - tig0025655:39720-39739 None:intergenic 20.0%
!! TTCAGTAAAAACAAAAGAAA+GGG - tig0025655:39868-39887 None:intergenic 20.0%
!! TTTCAGTAAAAACAAAAGAA+AGG - tig0025655:39869-39888 None:intergenic 20.0%
!! ATACTTCTTCAAAATCAAAT+AGG + tig0025655:40117-40136 Msa1424280:CDS 20.0%
!! AGATAAAAATGACTTATACT+TGG + tig0025655:40247-40266 Msa1424280:intron 20.0%
!!! ATCAAAATTTAAAGTATGGA+TGG + tig0025655:40366-40385 Msa1424280:intron 20.0%
!!! TTTAACTTATCTAATAGCAT+AGG + tig0025655:40524-40543 Msa1424280:intron 20.0%
!!! ATTATCCTTTGTTATAGAAA+TGG + tig0025655:40672-40691 Msa1424280:intron 20.0%
!! TTAAACCATTTCTATAACAA+AGG - tig0025655:40680-40699 None:intergenic 20.0%
!! TAGGTGTTTAATAAAATCAT+TGG - tig0025655:40871-40890 None:intergenic 20.0%
!!! GTTCATTTTTCATTATTGTA+CGG + tig0025655:40930-40949 Msa1424280:intron 20.0%
!!! TAACAGGATTTTAATCATAA+GGG - tig0025655:41029-41048 None:intergenic 20.0%
!! AAATAACATACATGTTGAAA+TGG - tig0025655:41089-41108 None:intergenic 20.0%
!!! CCCTTTGAAATTTTATATAA+AGG - tig0025655:41153-41172 None:intergenic 20.0%
!! AAAAATTTATGGTCCAATAA+AGG + tig0025655:41420-41439 Msa1424280:CDS 20.0%
!! TTGACAAATTATTATGCAAA+AGG + tig0025655:41499-41518 Msa1424280:CDS 20.0%
!! TCAATCAACTCAAAATAAAT+TGG - tig0025655:41680-41699 None:intergenic 20.0%
!!! ATTTATTTTGAGTTGATTGA+AGG + tig0025655:41680-41699 Msa1424280:three_prime_UTR 20.0%
! ACTGAATTTCTATGAATTAG+TGG - tig0025655:36929-36948 None:intergenic 25.0%
! AAGTTAACATGAAAAATGGA+AGG - tig0025655:37196-37215 None:intergenic 25.0%
!!! TTCCATTTTTCATGTTAACT+TGG + tig0025655:37195-37214 Msa1424280:CDS 25.0%
! TTCCAAGTTAACATGAAAAA+TGG - tig0025655:37200-37219 None:intergenic 25.0%
! TCTTTATCTCTTGAGTAAAA+GGG - tig0025655:37445-37464 None:intergenic 25.0%
! ATCTTTATCTCTTGAGTAAA+AGG - tig0025655:37446-37465 None:intergenic 25.0%
! GAGATAAAGATAAGAAAGTT+AGG + tig0025655:37455-37474 Msa1424280:CDS 25.0%
! AAAGTTAGGTATTTCTCTAA+TGG + tig0025655:37469-37488 Msa1424280:CDS 25.0%
! AAGTTAGGTATTTCTCTAAT+GGG + tig0025655:37470-37489 Msa1424280:CDS 25.0%
!! GACCATGATTTATATTTTAC+TGG + tig0025655:37935-37954 Msa1424280:intron 25.0%
! CACCAGTAAAATATAAATCA+TGG - tig0025655:37940-37959 None:intergenic 25.0%
!! ATTTATATTTTACTGGTGCA+TGG + tig0025655:37942-37961 Msa1424280:intron 25.0%
!! ACAAAATTTTATACCAGTTC+AGG - tig0025655:38048-38067 None:intergenic 25.0%
!! GGTATAAAATTTTGTTGCAT+TGG + tig0025655:38053-38072 Msa1424280:intron 25.0%
! GTAAAGACTAAAGATAGTTT+CGG - tig0025655:38099-38118 None:intergenic 25.0%
!! CATTTCGAAAAAGTACAATT+CGG - tig0025655:38128-38147 None:intergenic 25.0%
! AATAGAAATTTGGTACAGTT+TGG - tig0025655:38168-38187 None:intergenic 25.0%
! AACTGATAATTTGGATTGTT+AGG + tig0025655:38190-38209 Msa1424280:intron 25.0%
! GTACATATCAATATGCTATT+TGG - tig0025655:38822-38841 None:intergenic 25.0%
! GAAAGAATGAAGAATAGAAA+GGG - tig0025655:38934-38953 None:intergenic 25.0%
! CCAAAAGATATTATACAAAG+TGG - tig0025655:38961-38980 None:intergenic 25.0%
!! CCACTTTGTATAATATCTTT+TGG + tig0025655:38958-38977 Msa1424280:intron 25.0%
!! AAATGATGAGGTCTTTTATA+AGG - tig0025655:39004-39023 None:intergenic 25.0%
! AGTAAGAAAAGAGTGATTTA+TGG - tig0025655:39344-39363 None:intergenic 25.0%
! TCAACAAAGGACTTAATTAT+AGG - tig0025655:39632-39651 None:intergenic 25.0%
!! TTCAAAACAAGTAAAAGCAT+TGG + tig0025655:39924-39943 Msa1424280:CDS 25.0%
!!! TCAAAACAAGTAAAAGCATT+GGG + tig0025655:39925-39944 Msa1424280:CDS 25.0%
! TCTTTCTTACCTTAATGAAA+TGG + tig0025655:39990-40009 Msa1424280:CDS 25.0%
!!! TTTCTCTCTAGAACTTTATA+TGG - tig0025655:40319-40338 None:intergenic 25.0%
! GGCAAAATTAGTTAAGAAAA+AGG - tig0025655:40419-40438 None:intergenic 25.0%
! TTAAACTGTTTATCCAAACT+AGG + tig0025655:40744-40763 Msa1424280:intron 25.0%
! TCGAGGAATCTTAAATTATT+AGG + tig0025655:40845-40864 Msa1424280:intron 25.0%
!!! GTAACAGGATTTTAATCATA+AGG - tig0025655:41030-41049 None:intergenic 25.0%
! TGCAAGATATATCATTCTTA+AGG + tig0025655:41190-41209 Msa1424280:intron 25.0%
! TATGTTCTTAATGATTCCAT+TGG - tig0025655:41224-41243 None:intergenic 25.0%
!! TGAATCTTTAAGTTCTACTT+TGG - tig0025655:41249-41268 None:intergenic 25.0%
! TCTGTTAACAATTCCTTTAT+TGG - tig0025655:41436-41455 None:intergenic 25.0%
! ATAGTAATATCCCTATAGAT+TGG - tig0025655:41469-41488 None:intergenic 25.0%
! TGATTTCAATATATGAAAGC+TGG - tig0025655:41748-41767 None:intergenic 25.0%
GATATGAACAATTGAAGACA+AGG - tig0025655:37050-37069 None:intergenic 30.0%
! TTCTAATGATGCCATAGTTT+TGG - tig0025655:37080-37099 None:intergenic 30.0%
! TATACCTTTTACACCAGTTT+TGG - tig0025655:37149-37168 None:intergenic 30.0%
! GTAAAAGGTATACTAGATTC+TGG + tig0025655:37157-37176 Msa1424280:CDS 30.0%
ATGTGTTGAAGATCTATGAT+GGG - tig0025655:37271-37290 None:intergenic 30.0%
! TTTTTCCAAGTGATCAATCA+TGG + tig0025655:37343-37362 Msa1424280:CDS 30.0%
AGATGATCAATGGAATTTGT+AGG + tig0025655:37389-37408 Msa1424280:CDS 30.0%
!!! TTTTTTTTGTGTTAACCCTC+CGG + tig0025655:37640-37659 Msa1424280:intron 30.0%
AAAAAAGCTAAGTCTTGCAT+CGG + tig0025655:37714-37733 Msa1424280:intron 30.0%
ATTGGTAAAAGTTTATGCAG+AGG + tig0025655:37749-37768 Msa1424280:intron 30.0%
ATGGAAAATACCATTGTGAT+TGG - tig0025655:38558-38577 None:intergenic 30.0%
AAGTAAAAAATGAACCGCAA+TGG - tig0025655:38577-38596 None:intergenic 30.0%
! ACATCTTTTAATCTACCTAG+AGG + tig0025655:38601-38620 Msa1424280:intron 30.0%
! CAATGGACAAACCATTATTT+TGG + tig0025655:38743-38762 Msa1424280:intron 30.0%
GGAAAGAATGAAGAATAGAA+AGG - tig0025655:38935-38954 None:intergenic 30.0%
AGATATTATACAAAGTGGAG+AGG - tig0025655:38956-38975 None:intergenic 30.0%
AAGACCTCATCATTTGAAAA+AGG + tig0025655:39009-39028 Msa1424280:intron 30.0%
CTTTATTCAAATCAGGAGAA+AGG - tig0025655:39073-39092 None:intergenic 30.0%
CTTCTCACTTTATTCAAATC+AGG - tig0025655:39080-39099 None:intergenic 30.0%
! CTGATTTGAATAAAGTGAGA+AGG + tig0025655:39078-39097 Msa1424280:intron 30.0%
!! TTGTTATTGGTTCATAGCTT+TGG - tig0025655:39165-39184 None:intergenic 30.0%
GAATATCAGAAGGTGAAAAA+AGG + tig0025655:39216-39235 Msa1424280:intron 30.0%
! TTTTCTTACTGAACAGAACA+AGG + tig0025655:39354-39373 Msa1424280:intron 30.0%
AATCATCTGAGAGATAATCA+TGG - tig0025655:39392-39411 None:intergenic 30.0%
ATGATTATCTCTCAGATGAT+TGG + tig0025655:39391-39410 Msa1424280:intron 30.0%
GGCCAATAATAATCAGAATT+AGG + tig0025655:39434-39453 Msa1424280:intron 30.0%
AGGGTCTACTATTGATATAA+GGG - tig0025655:39849-39868 None:intergenic 30.0%
AAGGGTCTACTATTGATATA+AGG - tig0025655:39850-39869 None:intergenic 30.0%
GTGTATTTGTAGAGATATTG+TGG + tig0025655:39894-39913 Msa1424280:intron 30.0%
CATTAAGGTAAGAAAGATTG+AGG - tig0025655:39987-40006 None:intergenic 30.0%
!! TTGAAGAAGTATTGTCATGA+AGG - tig0025655:40109-40128 None:intergenic 30.0%
CTTCTTCAAAATCAAATAGG+TGG + tig0025655:40120-40139 Msa1424280:CDS 30.0%
! GAGCTCTTGTTGTAAATATT+GGG + tig0025655:40193-40212 Msa1424280:CDS 30.0%
! AGCTCTTGTTGTAAATATTG+GGG + tig0025655:40194-40213 Msa1424280:CDS 30.0%
! TTTTATCTCAAAACCGATCA+TGG - tig0025655:40235-40254 None:intergenic 30.0%
TACATAAAGCAAATGCTGTT+TGG - tig0025655:40457-40476 None:intergenic 30.0%
TTGCTTTATGTAGATGCAAA+AGG + tig0025655:40465-40484 Msa1424280:intron 30.0%
TGCTTTATGTAGATGCAAAA+GGG + tig0025655:40466-40485 Msa1424280:intron 30.0%
CCTGTCTTTCTTATAAATGA+AGG - tig0025655:40797-40816 None:intergenic 30.0%
CCTTCATTTATAAGAAAGAC+AGG + tig0025655:40794-40813 Msa1424280:intron 30.0%
AAACTTTCATTGTCTGACAT+AGG - tig0025655:40890-40909 None:intergenic 30.0%
GTTGAGATAAAACTTTGCAA+AGG - tig0025655:40981-41000 None:intergenic 30.0%
TAAGGAAAATGGATAGTAAC+AGG - tig0025655:41045-41064 None:intergenic 30.0%
! ATCCATTTTCCTTAATCTTC+TGG + tig0025655:41051-41070 Msa1424280:intron 30.0%
AAAGGATGAAATTGTGTACA+TGG - tig0025655:41135-41154 None:intergenic 30.0%
GAATGCACGTCAAAAATTTA+TGG + tig0025655:41409-41428 Msa1424280:CDS 30.0%
TAATATCCCTATAGATTGGA+GGG - tig0025655:41465-41484 None:intergenic 30.0%
AATTGAAGACAAGGTTGCTA+TGG - tig0025655:37041-37060 None:intergenic 35.0%
! GCATTTGATGATTCCAAAAC+TGG + tig0025655:37133-37152 Msa1424280:CDS 35.0%
GATTCCAAAACTGGTGTAAA+AGG + tig0025655:37142-37161 Msa1424280:CDS 35.0%
TGTGTTGAAGATCTATGATG+GGG - tig0025655:37270-37289 None:intergenic 35.0%
GATGTGTTGAAGATCTATGA+TGG - tig0025655:37272-37291 None:intergenic 35.0%
!! TCTTGGAAGCATTCTTGATT+TGG - tig0025655:37315-37334 None:intergenic 35.0%
GAATACCATGATTGATCACT+TGG - tig0025655:37351-37370 None:intergenic 35.0%
! TGGTATTCCACTTCATGTTT+TGG + tig0025655:37363-37382 Msa1424280:CDS 35.0%
ATCTCATCCAAAACATGAAG+TGG - tig0025655:37373-37392 None:intergenic 35.0%
!! GTTTTGGATGAGATGATCAA+TGG + tig0025655:37379-37398 Msa1424280:CDS 35.0%
TCTCTAATGGGAAGTTGTTT+AGG + tig0025655:37482-37501 Msa1424280:CDS 35.0%
CTCTAATGGGAAGTTGTTTA+GGG + tig0025655:37483-37502 Msa1424280:CDS 35.0%
ATTGGTATCTCTTCTGGATT+GGG - tig0025655:37562-37581 None:intergenic 35.0%
TATTGGTATCTCTTCTGGAT+TGG - tig0025655:37563-37582 None:intergenic 35.0%
CATACTATTGGTATCTCTTC+TGG - tig0025655:37568-37587 None:intergenic 35.0%
AAGAGATACCAATAGTATGC+AGG + tig0025655:37569-37588 Msa1424280:CDS 35.0%
GAACATTACCTGCATACTAT+TGG - tig0025655:37580-37599 None:intergenic 35.0%
AGAATGGAGCCTTAGTAATT+CGG + tig0025655:37671-37690 Msa1424280:intron 35.0%
AACCAAACTCCGAATTACTA+AGG - tig0025655:37683-37702 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+CGG - tig0025655:37796-37815 None:intergenic 35.0%
AGTTAGGCCAAATTTCAACA+TGG + tig0025655:37810-37829 Msa1424280:intron 35.0%
CGTGCGTGTAAATAAATTGT+GGG - tig0025655:37860-37879 None:intergenic 35.0%
CCACAATTTATTTACACGCA+CGG + tig0025655:37858-37877 Msa1424280:intron 35.0%
CACAATTTATTTACACGCAC+GGG + tig0025655:37859-37878 Msa1424280:intron 35.0%
! TATTTTACTGGTGCATGGTT+TGG + tig0025655:37947-37966 Msa1424280:intron 35.0%
GAAACCAAAAGCAAAAGAAC+CGG + tig0025655:37979-37998 Msa1424280:intron 35.0%
!!! ATAATGTTCGATTTTGGCTC+AGG - tig0025655:38233-38252 None:intergenic 35.0%
AAAATACCATTGTGATTGGC+AGG - tig0025655:38554-38573 None:intergenic 35.0%
! CACAATGGTATTTTCCATTG+CGG + tig0025655:38560-38579 Msa1424280:intron 35.0%
!! ACCTCTCTAGAATATCATGT+CGG - tig0025655:38710-38729 None:intergenic 35.0%
AGGTGTCTGCTTTATATCAA+TGG + tig0025655:38726-38745 Msa1424280:intron 35.0%
TTCTTCGATCATTTCCCAAA+AGG + tig0025655:38868-38887 Msa1424280:intron 35.0%
ATGCAAATGAAGAGAGTAGA+AGG - tig0025655:38896-38915 None:intergenic 35.0%
ATTTGCATAACATCCTTCCA+AGG + tig0025655:38908-38927 Msa1424280:intron 35.0%
! GAGGTCTTTTATAAGGAAGT+TGG - tig0025655:38997-39016 None:intergenic 35.0%
!!! CATGCCTTTTTCAAATGATG+AGG - tig0025655:39016-39035 None:intergenic 35.0%
CTCATCATTTGAAAAAGGCA+TGG + tig0025655:39014-39033 Msa1424280:intron 35.0%
GAATAAAGTGAGAAGGTTAG+TGG + tig0025655:39085-39104 Msa1424280:intron 35.0%
TTTCACCTTCTGATATTCTG+AGG - tig0025655:39214-39233 None:intergenic 35.0%
TCCACAAAGAAAATTGTGCA+TGG + tig0025655:39290-39309 Msa1424280:intron 35.0%
CCACAAAGAAAATTGTGCAT+GGG + tig0025655:39291-39310 Msa1424280:intron 35.0%
TCTGAGAGATAATCATGGAA+GGG - tig0025655:39387-39406 None:intergenic 35.0%
ATCTGAGAGATAATCATGGA+AGG - tig0025655:39388-39407 None:intergenic 35.0%
! CTCAGATGATTGGTTGAATA+TGG + tig0025655:39401-39420 Msa1424280:intron 35.0%
TGGTTGAATATGGATATAGC+AGG + tig0025655:39411-39430 Msa1424280:intron 35.0%
GGTTGAATATGGATATAGCA+GGG + tig0025655:39412-39431 Msa1424280:intron 35.0%
GTTGAATATGGATATAGCAG+GGG + tig0025655:39413-39432 Msa1424280:intron 35.0%
GATAGGACAGTAGAAGATTA+TGG + tig0025655:39490-39509 Msa1424280:intron 35.0%
! TAGAAGATTATGGTGGCTTT+TGG + tig0025655:39500-39519 Msa1424280:intron 35.0%
!! TATGGTGGCTTTTGGTTAAA+TGG + tig0025655:39508-39527 Msa1424280:intron 35.0%
CAGCACATTCCATTTCATTA+AGG - tig0025655:40002-40021 None:intergenic 35.0%
! TGCTGAAGCACTTTATATCA+TGG + tig0025655:40017-40036 Msa1424280:CDS 35.0%
! GCTGAAGCACTTTATATCAT+GGG + tig0025655:40018-40037 Msa1424280:CDS 35.0%
AAGTTCTTCATGAGAACCAA+TGG + tig0025655:40148-40167 Msa1424280:CDS 35.0%
AGTTCTTCATGAGAACCAAT+GGG + tig0025655:40149-40168 Msa1424280:CDS 35.0%
! GGAGCTCTTGTTGTAAATAT+TGG + tig0025655:40192-40211 Msa1424280:CDS 35.0%
AAATATTGGGGATATCCTAC+AGG + tig0025655:40206-40225 Msa1424280:CDS 35.0%
! ATAAAGCAAATGCTGTTTGG+TGG - tig0025655:40454-40473 None:intergenic 35.0%
! ATTAGTTTAAACAGGCCATG+AGG - tig0025655:40501-40520 None:intergenic 35.0%
TAAGCAGCTTGCAACTTATA+TGG + tig0025655:40632-40651 Msa1424280:intron 35.0%
AAACAGAGATGAACCTAGTT+TGG - tig0025655:40760-40779 None:intergenic 35.0%
!! AGTTTTGACATTCTTTGTCG+AGG + tig0025655:40828-40847 Msa1424280:intron 35.0%
TTTAATCATAAGGGCTCAGA+AGG - tig0025655:41020-41039 None:intergenic 35.0%
AGCCAGAAGATTAAGGAAAA+TGG - tig0025655:41056-41075 None:intergenic 35.0%
ACATGGCAATGATAGTTTAG+TGG - tig0025655:41118-41137 None:intergenic 35.0%
!! TCTTAAGGTGTTACTTCCAA+TGG + tig0025655:41205-41224 Msa1424280:intron 35.0%
CATTCATCAGTGTTAATCAC+CGG + tig0025655:41320-41339 Msa1424280:CDS 35.0%
ATTCATCAGTGTTAATCACC+GGG + tig0025655:41321-41340 Msa1424280:CDS 35.0%
AAGGTTGCTACAGATATTCT+AGG - tig0025655:41367-41386 None:intergenic 35.0%
AAGAAAACCCTCCAATCTAT+AGG + tig0025655:41455-41474 Msa1424280:CDS 35.0%
AGAAAACCCTCCAATCTATA+GGG + tig0025655:41456-41475 Msa1424280:CDS 35.0%
GTAATATCCCTATAGATTGG+AGG - tig0025655:41466-41485 None:intergenic 35.0%
!! TATTATGCAAAAGGCATTGC+TGG + tig0025655:41508-41527 Msa1424280:CDS 35.0%
CATCTGCTTCACAACTTTAA+CGG - tig0025655:41550-41569 None:intergenic 35.0%
AAAGTTGTGAAGCAGATGTA+AGG + tig0025655:41552-41571 Msa1424280:exon 35.0%
!! GTGAATGGATTGTAACAGAG+TGG - tig0025655:37019-37038 None:intergenic 40.0%
TATCCACAGCTCCAAAACTA+TGG + tig0025655:37066-37085 Msa1424280:exon 40.0%
! TTGAAGATCTATGATGGGGA+TGG - tig0025655:37266-37285 None:intergenic 40.0%
TCAAGAATGCTTCCAAGAAC+TGG + tig0025655:37317-37336 Msa1424280:CDS 40.0%
CAAGAATGCTTCCAAGAACT+GGG + tig0025655:37318-37337 Msa1424280:CDS 40.0%
AAGAATGCTTCCAAGAACTG+GGG + tig0025655:37319-37338 Msa1424280:CDS 40.0%
TTGGAAAAATCCCCAGTTCT+TGG - tig0025655:37332-37351 None:intergenic 40.0%
AGCCTTAGTAATTCGGAGTT+TGG + tig0025655:37678-37697 Msa1424280:intron 40.0%
AAGTCTTGCATCGGATAGAT+AGG + tig0025655:37723-37742 Msa1424280:intron 40.0%
CATCGGATAGATAGGACTAT+TGG + tig0025655:37731-37750 Msa1424280:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + tig0025655:37794-37813 Msa1424280:intron 40.0%
CTGGGTACCATGTTGAAATT+TGG - tig0025655:37820-37839 None:intergenic 40.0%
CAAATTTCAACATGGTACCC+AGG + tig0025655:37818-37837 Msa1424280:intron 40.0%
GCGTGTAAATAAATTGTGGG+TGG - tig0025655:37857-37876 None:intergenic 40.0%
CCGTGCGTGTAAATAAATTG+TGG - tig0025655:37861-37880 None:intergenic 40.0%
!!! TGTACCGGTTCTTTTGCTTT+TGG - tig0025655:37986-38005 None:intergenic 40.0%
AAAGAACCGGTACAACAACT+AGG + tig0025655:37992-38011 Msa1424280:intron 40.0%
GGACTAACTTCAACTGCTAA+TGG + tig0025655:38017-38036 Msa1424280:intron 40.0%
!!! TTCGATTTTGGCTCAGGTTA+TGG - tig0025655:38227-38246 None:intergenic 40.0%
ATTGCTTAAATAGTGCCCCA+GGG + tig0025655:38393-38412 Msa1424280:intron 40.0%
TATTGTTAACAAGTGCCCCT+GGG - tig0025655:38412-38431 None:intergenic 40.0%
TCAATTATCCGTCTCAGTTC+AGG - tig0025655:38488-38507 None:intergenic 40.0%
CGAACTGAACTAACTCAGTT+TGG - tig0025655:38524-38543 None:intergenic 40.0%
CGGATACTGACATTTATCAC+CGG - tig0025655:38634-38653 None:intergenic 40.0%
AAACTGTGTCTAAGCAGTGT+CGG + tig0025655:38664-38683 Msa1424280:intron 40.0%
CACTTCGAGGACCAAAATAA+TGG - tig0025655:38757-38776 None:intergenic 40.0%
AGTGTAACTAGCTGTCACAT+TGG + tig0025655:38773-38792 Msa1424280:intron 40.0%
ATGAAGAATAGAAAGGGCCT+TGG - tig0025655:38928-38947 None:intergenic 40.0%
CATCTAACCTTGCAAAGTCT+TGG - tig0025655:39117-39136 None:intergenic 40.0%
GACTTTGCAAGGTTAGATGA+CGG + tig0025655:39118-39137 Msa1424280:intron 40.0%
!! GTTGAAGCAAGGCTTGTTAT+TGG - tig0025655:39178-39197 None:intergenic 40.0%
! CTTGTAAGTGAGTTGAAGCA+AGG - tig0025655:39189-39208 None:intergenic 40.0%
AAGTGCCTCAGAATATCAGA+AGG + tig0025655:39206-39225 Msa1424280:intron 40.0%
! CCCATGCACAATTTTCTTTG+TGG - tig0025655:39294-39313 None:intergenic 40.0%
! GAATGAGTTGAGAGAGATTG+TGG + tig0025655:39468-39487 Msa1424280:intron 40.0%
AGTTGAGAGAGATTGTGGAT+AGG + tig0025655:39473-39492 Msa1424280:intron 40.0%
AGGACAGTAGAAGATTATGG+TGG + tig0025655:39493-39512 Msa1424280:intron 40.0%
CAAGATCTTGAATCGCACAT+GGG + tig0025655:39535-39554 Msa1424280:intron 40.0%
TCATGAAGCAACCTCAGTTT+GGG + tig0025655:39600-39619 Msa1424280:intron 40.0%
GTTTCGTAACTAGTGAAGCT+CGG + tig0025655:39744-39763 Msa1424280:intron 40.0%
GGAAGAGTGGAGGATTTAAT+TGG + tig0025655:39765-39784 Msa1424280:intron 40.0%
TGACATCGAGTTACACTTTC+AGG + tig0025655:39819-39838 Msa1424280:intron 40.0%
GAGTTATTGTCAGAAGCTCT+TGG + tig0025655:39961-39980 Msa1424280:CDS 40.0%
TCCCATAGTTAACTCAGGTT+CGG - tig0025655:40064-40083 None:intergenic 40.0%
CCAATTCCCATAGTTAACTC+AGG - tig0025655:40069-40088 None:intergenic 40.0%
CCTGAGTTAACTATGGGAAT+TGG + tig0025655:40066-40085 Msa1424280:CDS 40.0%
ATCCTACAGGTAACCATGAT+CGG + tig0025655:40219-40238 Msa1424280:intron 40.0%
AAGAAAGACAGGTGACAGTA+TGG + tig0025655:40805-40824 Msa1424280:intron 40.0%
ACAGATCAGCCAGAAGATTA+AGG - tig0025655:41063-41082 None:intergenic 40.0%
CTATATTCCTTGACAACACC+CGG - tig0025655:41342-41361 None:intergenic 40.0%
GACAAGGTTGCTATGGTGAA+TGG - tig0025655:37034-37053 None:intergenic 45.0%
!!! ATGCCATAGTTTTGGAGCTG+TGG - tig0025655:37072-37091 None:intergenic 45.0%
GTGAAGTTGGACTCATCAGT+AGG - tig0025655:37241-37260 None:intergenic 45.0%
! AAGATCTATGATGGGGATGG+TGG - tig0025655:37263-37282 None:intergenic 45.0%
TGGGAAGTTGTTTAGGGACA+TGG + tig0025655:37489-37508 Msa1424280:CDS 45.0%
TTAGGGACATGGCTGCTAAT+TGG + tig0025655:37500-37519 Msa1424280:CDS 45.0%
! CTTCTGGATTGGGAAGATCA+GGG - tig0025655:37552-37571 None:intergenic 45.0%
! TCTTCTGGATTGGGAAGATC+AGG - tig0025655:37553-37572 None:intergenic 45.0%
! CGGAGTTTGGTTGAGAGTAT+TGG + tig0025655:37691-37710 Msa1424280:intron 45.0%
CCTTACAAAACCGGCTAGTA+AGG - tig0025655:37787-37806 None:intergenic 45.0%
!! CCTTACTAGCCGGTTTTGTA+AGG + tig0025655:37784-37803 Msa1424280:intron 45.0%
AACCGGTACAACAACTAGGT+AGG + tig0025655:37996-38015 Msa1424280:intron 45.0%
GTCCTACCTAGTTGTTGTAC+CGG - tig0025655:38001-38020 None:intergenic 45.0%
! GCTAATGGATCATCCTGAAC+TGG + tig0025655:38032-38051 Msa1424280:intron 45.0%
AAATGTTAACGAGTGCCCCT+GGG + tig0025655:38264-38283 Msa1424280:intron 45.0%
GATTGCTTAAATAGTGCCCC+AGG + tig0025655:38392-38411 Msa1424280:intron 45.0%
TTGCTTAAATAGTGCCCCAG+GGG + tig0025655:38394-38413 Msa1424280:intron 45.0%
ATTGTTAACAAGTGCCCCTG+GGG - tig0025655:38411-38430 None:intergenic 45.0%
GTATTGTTAACAAGTGCCCC+TGG - tig0025655:38413-38432 None:intergenic 45.0%
ACTGACATTTATCACCGGAC+AGG - tig0025655:38629-38648 None:intergenic 45.0%
GACACAGTTTAGACACTGCT+CGG - tig0025655:38654-38673 None:intergenic 45.0%
!! TGTCTAAGCAGTGTCGGTAT+CGG + tig0025655:38670-38689 Msa1424280:intron 45.0%
! GCCGACATGATATTCTAGAG+AGG + tig0025655:38706-38725 Msa1424280:intron 45.0%
TGACAGCTAGTTACACTTCG+AGG - tig0025655:38770-38789 None:intergenic 45.0%
TGGTCTATGTGATTCTGACG+TGG + tig0025655:38793-38812 Msa1424280:intron 45.0%
! GAGAGTAGAAGGAGCCTTTT+GGG - tig0025655:38885-38904 None:intergenic 45.0%
! AGAGAGTAGAAGGAGCCTTT+TGG - tig0025655:38886-38905 None:intergenic 45.0%
AGAATAGAAAGGGCCTTGGA+AGG - tig0025655:38924-38943 None:intergenic 45.0%
GGCATGGAAAGTTTCTGTGT+TGG + tig0025655:39030-39049 Msa1424280:intron 45.0%
! TGGAAAGTTTCTGTGTTGGC+TGG + tig0025655:39034-39053 Msa1424280:intron 45.0%
GCTCAATCCAAGACTTTGCA+AGG + tig0025655:39107-39126 Msa1424280:intron 45.0%
CGGCTAAAGATAGTGCAACT+TGG + tig0025655:39138-39157 Msa1424280:intron 45.0%
!! GTGGCTTTTGGTTAAATGGC+AGG + tig0025655:39512-39531 Msa1424280:intron 45.0%
GCAAGATCTTGAATCGCACA+TGG + tig0025655:39534-39553 Msa1424280:intron 45.0%
ACTGAGGTTGCTTCATGACT+TGG - tig0025655:39598-39617 None:intergenic 45.0%
GTCATGAAGCAACCTCAGTT+TGG + tig0025655:39599-39618 Msa1424280:intron 45.0%
ATAGGTCAAGTCCCAAACTG+AGG - tig0025655:39614-39633 None:intergenic 45.0%
CCATAGTTAACTCAGGTTCG+GGG - tig0025655:40062-40081 None:intergenic 45.0%
CCCATAGTTAACTCAGGTTC+GGG - tig0025655:40063-40082 None:intergenic 45.0%
CCCGAACCTGAGTTAACTAT+GGG + tig0025655:40060-40079 Msa1424280:CDS 45.0%
AACCGATCATGGTTACCTGT+AGG - tig0025655:40224-40243 None:intergenic 45.0%
!! GTTTGGTGGTGAAACACTGA+AGG - tig0025655:40440-40459 None:intergenic 45.0%
TGTAGATGCAAAAGGGTGAC+TGG + tig0025655:40473-40492 Msa1424280:intron 45.0%
! TTAATCACCGGGTGTTGTCA+AGG + tig0025655:41332-41351 Msa1424280:CDS 45.0%
! CGGGTGTTGTCAAGGAATAT+AGG + tig0025655:41340-41359 Msa1424280:CDS 45.0%
GGACATGGCTGCTAATTGGA+GGG + tig0025655:37504-37523 Msa1424280:CDS 50.0%
GTGTTAACCCTCCGGTTCTT+AGG + tig0025655:37648-37667 Msa1424280:intron 50.0%
CCATTCTCCTAAGAACCGGA+GGG - tig0025655:37658-37677 None:intergenic 50.0%
TCCATTCTCCTAAGAACCGG+AGG - tig0025655:37659-37678 None:intergenic 50.0%
GGCTCCATTCTCCTAAGAAC+CGG - tig0025655:37662-37681 None:intergenic 50.0%
ACACTCCTCACCTTACTAGC+CGG + tig0025655:37774-37793 Msa1424280:intron 50.0%
CAAAACCGGCTAGTAAGGTG+AGG - tig0025655:37782-37801 None:intergenic 50.0%
TGGTACCCAGGCCTATTGTT+CGG + tig0025655:37830-37849 Msa1424280:intron 50.0%
!! ACTGGTGCATGGTTTGGTTC+AGG + tig0025655:37953-37972 Msa1424280:intron 50.0%
!! GTGCATGGTTTGGTTCAGGA+AGG + tig0025655:37957-37976 Msa1424280:intron 50.0%
GAAATGTTAACGAGTGCCCC+TGG + tig0025655:38263-38282 Msa1424280:intron 50.0%
AATGTTAACGAGTGCCCCTG+GGG + tig0025655:38265-38284 Msa1424280:intron 50.0%
!! ATCCCTTAAAGAGTGCCCCA+GGG - tig0025655:38283-38302 None:intergenic 50.0%
!! AATCCCTTAAAGAGTGCCCC+AGG - tig0025655:38284-38303 None:intergenic 50.0%
! CGTCTCAGTTCAGGTCTTGT+CGG - tig0025655:38479-38498 None:intergenic 50.0%
CGACAAGACCTGAACTGAGA+CGG + tig0025655:38477-38496 Msa1424280:intron 50.0%
GAACTGCCTGCCAATCACAA+TGG + tig0025655:38545-38564 Msa1424280:intron 50.0%
TCTACCTAGAGGATCCTGTC+CGG + tig0025655:38612-38631 Msa1424280:intron 50.0%
TCTTGAATCGCACATGGGAG+TGG + tig0025655:39540-39559 Msa1424280:intron 50.0%
!! GGTTGCTTCATGACTTGGTG+TGG - tig0025655:39593-39612 None:intergenic 50.0%
ACTAGTGAAGCTCGGAAGAG+TGG + tig0025655:39752-39771 Msa1424280:intron 50.0%
CCCCGAACCTGAGTTAACTA+TGG + tig0025655:40059-40078 Msa1424280:CDS 50.0%
CTGGTGGAACATTGACCCAT+TGG - tig0025655:40167-40186 None:intergenic 50.0%
GTCAATGTTCCACCAGTGCA+CGG + tig0025655:40171-40190 Msa1424280:CDS 50.0%
! GATGGGGATGGTGGTGAAGT+TGG - tig0025655:37254-37273 None:intergenic 55.0%
GGGACATGGCTGCTAATTGG+AGG + tig0025655:37503-37522 Msa1424280:CDS 55.0%
CCCTCCGGTTCTTAGGAGAA+TGG + tig0025655:37655-37674 Msa1424280:intron 55.0%
GGTACCCAGGCCTATTGTTC+GGG + tig0025655:37831-37850 Msa1424280:intron 55.0%
TTGTGGGTGGCCCGAACAAT+AGG - tig0025655:37844-37863 None:intergenic 55.0%
!! TCCCTTAAAGAGTGCCCCAG+GGG - tig0025655:38282-38301 None:intergenic 55.0%
! CAGTTCAGGTCTTGTCGGTG+CGG - tig0025655:38474-38493 None:intergenic 55.0%
ATCACCGGACAGGATCCTCT+AGG - tig0025655:38619-38638 None:intergenic 55.0%
! CTTGGTGTGGTCTCTTGTGC+TGG - tig0025655:39580-39599 None:intergenic 55.0%
AGTGAAGCTCGGAAGAGTGG+AGG + tig0025655:39755-39774 Msa1424280:intron 55.0%
!! AACTCAGGTTCGGGGCATTG+TGG - tig0025655:40054-40073 None:intergenic 55.0%
ACAACAAGAGCTCCGTGCAC+TGG - tig0025655:40186-40205 None:intergenic 55.0%
AAAGGGTGACTGGAGCCTCA+TGG + tig0025655:40483-40502 Msa1424280:intron 55.0%
GTGGCCCGAACAATAGGCCT+GGG - tig0025655:37838-37857 None:intergenic 60.0%
! TGCCCCTGGGGCACTCTTTA+AGG + tig0025655:38277-38296 Msa1424280:intron 60.0%
! GCCCCTGGGGCACTCTTTAA+GGG + tig0025655:38278-38297 Msa1424280:intron 60.0%
ACAAGAGCTCCGTGCACTGG+TGG - tig0025655:40183-40202 None:intergenic 60.0%
GGTGGCCCGAACAATAGGCC+TGG - tig0025655:37839-37858 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0025655 gene 36919 41787 36919 ID=Msa1424280;Name=Msa1424280
tig0025655 mRNA 36919 41787 36919 ID=Msa1424280-mRNA-1;Parent=Msa1424280;Name=Msa1424280-mRNA-1;_AED=0.31;_eAED=0.31;_QI=166|1|1|1|1|1|3|226|361
tig0025655 exon 36919 37590 36919 ID=Msa1424280-mRNA-1:exon:3680;Parent=Msa1424280-mRNA-1
tig0025655 exon 39906 40227 39906 ID=Msa1424280-mRNA-1:exon:3681;Parent=Msa1424280-mRNA-1
tig0025655 exon 41304 41787 41304 ID=Msa1424280-mRNA-1:exon:3682;Parent=Msa1424280-mRNA-1
tig0025655 five_prime_UTR 36919 37084 36919 ID=Msa1424280-mRNA-1:five_prime_utr;Parent=Msa1424280-mRNA-1
tig0025655 CDS 37085 37590 37085 ID=Msa1424280-mRNA-1:cds;Parent=Msa1424280-mRNA-1
tig0025655 CDS 39906 40227 39906 ID=Msa1424280-mRNA-1:cds;Parent=Msa1424280-mRNA-1
tig0025655 CDS 41304 41561 41304 ID=Msa1424280-mRNA-1:cds;Parent=Msa1424280-mRNA-1
tig0025655 three_prime_UTR 41562 41787 41562 ID=Msa1424280-mRNA-1:three_prime_utr;Parent=Msa1424280-mRNA-1
Gene Sequence

>Msa1424280

ATGGCATCATTAGAATCATTTAGTGACTTAAAAAAAGCACAAGTTCAAGCATTTGATGATTCCAAAACTGGTGTAAAAGGTATACTAGATTCTGGCATAACAAAGATACCTTCCATTTTTCATGTTAACTTGGAAAAATCTACTCAAAATTCACCTACTGATGAGTCCAACTTCACCACCATCCCCATCATAGATCTTCAACACATCAAAAGAGTTGAGCTAGTTGACCAAATCAAGAATGCTTCCAAGAACTGGGGATTTTTCCAAGTGATCAATCATGGTATTCCACTTCATGTTTTGGATGAGATGATCAATGGAATTTGTAGGTTTCATGAACAAGATGCTGAAGCTAAGAAACCCTTTTACTCAAGAGATAAAGATAAGAAAGTTAGGTATTTCTCTAATGGGAAGTTGTTTAGGGACATGGCTGCTAATTGGAGGGATACAATTGCTTTTGCTGCAAACCCTGATCTTCCCAATCCAGAAGAGATACCAATAGTATGCAGAGATATTGTGGCTGAATATTCAAAACAAGTAAAAGCATTGGGTGTTGCGATCTTTGAGTTATTGTCAGAAGCTCTTGGCCTCAATCTTTCTTACCTTAATGAAATGGAATGTGCTGAAGCACTTTATATCATGGGACAATACTATCCACAATGCCCCGAACCTGAGTTAACTATGGGAATTGGAAAACACACTGATTGTGCCTTCATGACAATACTTCTTCAAAATCAAATAGGTGGTCTTCAAGTTCTTCATGAGAACCAATGGGTCAATGTTCCACCAGTGCACGGAGCTCTTGTTGTAAATATTGGGGATATCCTACAGCTAATGACGAATGACACATTCATCAGTGTTAATCACCGGGTGTTGTCAAGGAATATAGGTCCTAGAATATCTGTAGCAACCTTCTTTATGAATTTTACTATATCTGAATGCACGTCAAAAATTTATGGTCCAATAAAGGAATTGTTAACAGAAGAAAACCCTCCAATCTATAGGGATATTACTATGAAAGAAATCTTGACAAATTATTATGCAAAAGGCATTGCTGGTAATGCTTGCTTGATTCCGTTAAAGTTGTGA
Protein sequence

>Msa1424280

MASLESFSDLKKAQVQAFDDSKTGVKGILDSGITKIPSIFHVNLEKSTQNSPTDESNFTTIPIIDLQHIKRVELVDQIKNASKNWGFFQVINHGIPLHVLDEMINGICRFHEQDAEAKKPFYSRDKDKKVRYFSNGKLFRDMAANWRDTIAFAANPDLPNPEEIPIVCRDIVAEYSKQVKALGVAIFELLSEALGLNLSYLNEMECAEALYIMGQYYPQCPEPELTMGIGKHTDCAFMTILLQNQIGGLQVLHENQWVNVPPVHGALVVNIGDILQLMTNDTFISVNHRVLSRNIGPRISVATFFMNFTISECTSKIYGPIKELLTEENPPIYRDITMKEILTNYYAKGIAGNACLIPLKL*