AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1445310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1445310 MtrunA17_Chr4g0055591 95.876 291 12 0 1 291 1 291 0.0 587
Msa1445310 MtrunA17_Chr1g0187821 63.014 292 99 4 11 294 15 305 3.14e-133 382
Msa1445310 MtrunA17_Chr1g0187811 61.695 295 101 4 11 293 131 425 2.67e-130 379
Msa1445310 MtrunA17_Chr1g0187831 60.000 295 103 4 11 293 16 307 1.88e-127 368
Msa1445310 MtrunA17_Chr7g0235951 60.071 283 106 2 14 291 22 302 1.12e-124 360
Msa1445310 MtrunA17_Chr7g0247991 60.616 292 108 2 7 293 15 304 2.19e-124 360
Msa1445310 MtrunA17_Chr2g0311711 57.732 291 114 4 11 294 17 305 1.72e-122 355
Msa1445310 MtrunA17_Chr2g0311701 53.979 289 128 1 11 294 19 307 3.85e-119 347
Msa1445310 MtrunA17_Chr8g0364471 56.055 289 114 3 11 291 19 302 5.76e-119 346
Msa1445310 MtrunA17_Chr8g0335411 59.028 288 111 2 11 293 19 304 9.82e-119 345
Msa1445310 MtrunA17_Chr2g0311681 52.980 302 133 4 1 294 1 301 4.12e-115 336
Msa1445310 MtrunA17_Chr7g0236011 57.292 288 116 2 11 293 19 304 6.35e-114 333
Msa1445310 MtrunA17_Chr2g0311691 51.163 301 140 2 1 294 1 301 3.85e-111 326
Msa1445310 MtrunA17_Chr8g0354261 51.034 290 134 2 11 293 19 307 5.38e-111 326
Msa1445310 MtrunA17_Chr4g0011311 54.779 272 116 2 11 277 19 288 1.33e-108 317
Msa1445310 MtrunA17_Chr8g0336751 54.545 286 124 2 11 291 45 329 4.48e-108 319
Msa1445310 MtrunA17_Chr8g0354241 50.000 288 136 2 11 291 19 305 2.43e-107 317
Msa1445310 MtrunA17_Chr8g0348081 51.773 282 126 2 16 291 19 296 2.02e-105 311
Msa1445310 MtrunA17_Chr8g0336851 52.297 283 121 3 17 291 20 296 3.06e-105 311
Msa1445310 MtrunA17_Chr8g0336761 53.546 282 121 2 16 291 19 296 4.38e-105 310
Msa1445310 MtrunA17_Chr4g0066991 56.643 286 97 4 11 291 19 282 7.76e-105 309
Msa1445310 MtrunA17_Chr8g0336631 52.650 283 123 3 16 291 19 297 4.81e-104 308
Msa1445310 MtrunA17_Chr2g0311921 50.352 284 134 3 14 291 8 290 9.48e-104 306
Msa1445310 MtrunA17_Chr1g0167911 49.831 295 135 4 1 290 1 287 6.38e-103 305
Msa1445310 MtrunA17_Chr2g0311741 57.198 257 103 2 45 294 9 265 8.36e-103 303
Msa1445310 MtrunA17_Chr2g0311761 51.195 293 132 5 7 291 15 304 4.10e-102 303
Msa1445310 MtrunA17_Chr2g0311831 49.655 290 140 2 7 291 15 303 7.14e-102 302
Msa1445310 MtrunA17_Chr4g0066121 51.399 286 128 3 13 291 16 297 3.05e-101 301
Msa1445310 MtrunA17_Chr8g0336781 49.301 286 134 3 13 291 51 332 1.21e-100 300
Msa1445310 MtrunA17_Chr1g0184241 50.000 284 138 2 11 291 20 302 2.21e-100 298
Msa1445310 MtrunA17_Chr8g0336861 50.530 283 129 3 16 291 19 297 3.86e-99 295
Msa1445310 MtrunA17_Chr8g0362741 54.613 271 103 5 11 277 19 273 5.12e-99 292
Msa1445310 MtrunA17_Chr1g0167951 50.534 281 130 4 15 290 10 286 3.76e-97 290
Msa1445310 MtrunA17_Chr6g0472861 48.185 303 145 4 2 294 7 307 7.45e-95 285
Msa1445310 MtrunA17_Chr1g0167961 48.829 299 135 6 1 291 16 304 8.08e-94 282
Msa1445310 MtrunA17_Chr7g0225881 47.222 288 143 3 14 294 17 302 3.95e-93 280
Msa1445310 MtrunA17_Chr2g0311861 46.643 283 125 3 14 291 18 279 7.29e-93 278
Msa1445310 MtrunA17_Chr7g0266651 44.407 295 158 3 1 291 1 293 2.13e-85 260
Msa1445310 MtrunA17_Chr7g0235981 44.128 281 128 4 11 291 5 256 7.52e-85 258
Msa1445310 MtrunA17_Chr1g0167931 42.905 296 118 4 1 291 1 250 1.64e-78 241
Msa1445310 MtrunA17_Chr1g0161041 45.161 279 151 1 15 291 50 328 1.47e-73 231
Msa1445310 MtrunA17_Chr8g0336831 46.502 243 115 4 1 236 8 242 1.40e-71 221
Msa1445310 MtrunA17_Chr1g0161081 43.011 279 157 1 15 291 27 305 2.68e-71 224
Msa1445310 MtrunA17_Chr1g0161111 42.652 279 158 1 15 291 86 364 4.93e-70 223
Msa1445310 MtrunA17_Chr3g0128001 36.667 270 163 4 28 291 5 272 6.62e-51 171
Msa1445310 MtrunA17_Chr8g0336791 44.845 194 92 4 1 187 8 193 1.62e-49 162
Msa1445310 MtrunA17_Chr6g0455481 38.683 243 142 5 60 296 41 282 4.39e-49 166
Msa1445310 MtrunA17_Chr8g0364161 48.765 162 76 3 11 167 19 178 1.07e-48 160
Msa1445310 MtrunA17_Chr7g0235991 53.521 142 61 1 61 197 21 162 1.21e-48 160
Msa1445310 MtrunA17_Chr1g0184121 40.417 240 134 4 60 291 36 274 7.25e-48 163
Msa1445310 MtrunA17_Chr8g0364171 66.364 110 37 0 168 277 17 126 4.54e-47 154
Msa1445310 MtrunA17_Chr8g0345831 35.662 272 162 4 29 291 11 278 6.19e-47 160
Msa1445310 MtrunA17_Chr7g0220001 36.929 241 146 4 56 291 36 275 7.14e-47 160
Msa1445310 MtrunA17_Chr3g0093741 35.401 274 170 4 24 291 17 289 2.24e-46 159
Msa1445310 MtrunA17_Chr7g0220011 36.709 237 144 4 60 291 38 273 2.35e-46 159
Msa1445310 MtrunA17_Chr1g0179801 32.168 286 173 7 24 291 26 308 3.06e-46 159
Msa1445310 MtrunA17_Chr7g0265351 35.745 235 148 2 60 291 38 272 7.40e-45 155
Msa1445310 MtrunA17_Chr3g0093761 35.036 274 170 5 24 291 17 288 3.43e-44 154
Msa1445310 MtrunA17_Chr1g0184111 37.603 242 138 4 60 291 36 274 4.95e-44 153
Msa1445310 MtrunA17_Chr3g0093751 33.942 274 174 4 24 291 17 289 1.90e-43 152
Msa1445310 MtrunA17_Chr7g0265221 30.137 292 179 6 24 291 25 315 2.28e-43 152
Msa1445310 MtrunA17_Chr3g0126741 32.226 301 190 8 1 291 1 297 4.70e-43 151
Msa1445310 MtrunA17_Chr2g0311631 32.014 278 177 5 24 291 21 296 4.80e-43 151
Msa1445310 MtrunA17_Chr7g0242551 33.333 297 174 10 15 291 5 297 4.80e-43 151
Msa1445310 MtrunA17_Chr3g0102041 35.124 242 145 4 61 291 39 279 2.93e-42 149
Msa1445310 MtrunA17_Chr1g0184101 35.833 240 142 6 61 291 38 274 3.53e-42 148
Msa1445310 MtrunA17_Chr1g0184161 34.440 241 148 5 59 291 36 274 2.92e-41 145
Msa1445310 MtrunA17_Chr8g0371931 33.065 248 153 5 56 291 33 279 8.34e-41 145
Msa1445310 MtrunA17_Chr1g0168001 41.667 180 86 6 1 169 1 172 3.47e-40 138
Msa1445310 MtrunA17_Chr4g0050031 30.142 282 182 8 23 291 21 300 7.17e-40 142
Msa1445310 MtrunA17_Chr5g0412651 35.081 248 141 7 60 291 37 280 7.99e-40 142
Msa1445310 MtrunA17_Chr1g0184151 33.333 240 150 5 60 291 37 274 9.54e-40 142
Msa1445310 MtrunA17_Chr4g0006371 31.104 299 167 8 25 291 14 305 1.13e-39 142
Msa1445310 MtrunA17_Chr2g0311751 50.758 132 58 2 45 169 9 140 3.87e-39 135
Msa1445310 MtrunA17_Chr4g0045451 33.588 262 137 8 61 291 26 281 6.40e-39 140
Msa1445310 MtrunA17_Chr5g0412681 34.426 244 140 7 60 291 32 267 7.33e-39 139
Msa1445310 MtrunA17_Chr7g0250511 33.824 272 166 8 30 291 19 286 1.05e-38 139
Msa1445310 MtrunA17_Chr4g0045441 34.728 239 130 7 74 291 48 281 1.10e-38 139
Msa1445310 MtrunA17_Chr8g0375701 32.660 297 176 10 10 290 1 289 1.21e-38 139
Msa1445310 MtrunA17_Chr8g0375571 30.935 278 176 7 24 289 10 283 2.37e-38 138
Msa1445310 MtrunA17_Chr8g0371921 32.258 248 155 5 56 291 33 279 7.26e-38 137
Msa1445310 MtrunA17_Chr1g0162361 33.730 252 141 6 61 291 27 273 1.29e-37 136
Msa1445310 MtrunA17_Chr5g0412671 34.274 248 143 7 60 291 37 280 2.65e-37 135
Msa1445310 MtrunA17_Chr5g0439011 32.271 251 142 7 57 293 4 240 2.81e-37 134
Msa1445310 MtrunA17_Chr5g0420951 33.214 280 165 10 24 289 17 288 4.28e-37 135
Msa1445310 MtrunA17_Chr8g0336801 60.227 88 35 0 204 291 1 88 4.95e-37 129
Msa1445310 MtrunA17_Chr5g0426891 30.833 240 155 4 61 291 39 276 5.03e-37 134
Msa1445310 MtrunA17_Chr4g0045431 33.462 260 140 7 61 291 26 281 5.26e-37 134
Msa1445310 MtrunA17_Chr1g0167921 51.667 120 52 1 170 283 50 169 7.19e-37 129
Msa1445310 MtrunA17_Chr8g0336871 57.273 110 41 1 182 291 3 106 1.29e-36 129
Msa1445310 MtrunA17_Chr3g0109041 31.206 282 175 6 25 291 10 287 1.94e-36 133
Msa1445310 MtrunA17_Chr2g0319491 30.992 242 148 6 61 291 33 266 2.59e-36 132
Msa1445310 MtrunA17_Chr8g0375671 29.078 282 178 8 25 291 18 292 2.95e-36 133
Msa1445310 MtrunA17_Chr1g0162351 32.353 238 139 4 73 291 92 326 4.47e-36 133
Msa1445310 MtrunA17_Chr1g0162321 32.353 238 139 4 73 291 92 326 4.65e-36 133
Msa1445310 MtrunA17_Chr3g0125201 31.076 251 140 8 60 291 2 238 6.80e-36 130
Msa1445310 MtrunA17_Chr5g0437181 33.197 244 149 5 61 291 49 291 1.20e-35 131
Msa1445310 MtrunA17_Chr3g0121141 31.600 250 140 9 61 293 4 239 3.66e-35 129
Msa1445310 MtrunA17_Chr5g0421101 31.900 279 168 11 24 289 12 281 4.37e-35 129
Msa1445310 MtrunA17_Chr4g0045411 31.518 257 146 7 60 291 29 280 5.14e-35 129
Msa1445310 MtrunA17_Chr5g0421091 31.449 283 167 10 25 291 11 282 1.20e-34 128
Msa1445310 MtrunA17_Chr3g0113641 32.377 244 151 5 61 291 50 292 1.65e-34 128
Msa1445310 MtrunA17_Chr8g0375601 28.114 281 184 7 25 291 11 287 2.07e-34 128
Msa1445310 MtrunA17_Chr2g0332191 33.065 248 142 8 59 291 50 288 2.32e-34 128
Msa1445310 MtrunA17_Chr5g0405411 30.165 242 157 4 61 291 39 279 2.97e-34 127
Msa1445310 MtrunA17_Chr5g0423251 32.812 256 149 9 52 291 35 283 4.08e-34 127
Msa1445310 MtrunA17_Chr5g0420901 30.824 279 171 10 24 289 11 280 6.01e-34 126
Msa1445310 MtrunA17_Chr5g0421011 30.435 276 176 7 24 289 12 281 6.26e-34 126
Msa1445310 MtrunA17_Chr5g0420981 32.014 278 171 9 24 289 17 288 6.94e-34 126
Msa1445310 MtrunA17_Chr1g0162191 29.528 254 157 6 53 291 39 285 7.01e-34 126
Msa1445310 MtrunA17_Chr5g0420941 30.249 281 174 7 24 291 10 281 8.40e-34 126
Msa1445310 MtrunA17_Chr8g0365241 31.071 280 170 10 24 289 22 292 1.12e-33 126
Msa1445310 MtrunA17_Chr5g0423201 32.394 284 161 11 24 289 12 282 2.50e-33 125
Msa1445310 MtrunA17_Chr5g0421041 32.231 242 144 8 61 289 45 279 2.77e-33 125
Msa1445310 MtrunA17_Chr4g0045471 30.544 239 141 6 74 291 48 282 3.94e-33 124
Msa1445310 MtrunA17_Chr5g0423191 30.556 252 155 7 53 291 39 283 1.89e-32 122
Msa1445310 MtrunA17_Chr5g0423221 31.048 248 154 8 54 289 64 306 1.93e-32 123
Msa1445310 MtrunA17_Chr2g0285931 30.325 277 160 9 37 293 7 270 1.62e-31 120
Msa1445310 MtrunA17_Chr8g0375681 33.023 215 122 7 90 291 15 220 2.56e-31 118
Msa1445310 MtrunA17_Chr5g0423211 29.537 281 175 9 24 289 12 284 3.34e-31 119
Msa1445310 MtrunA17_Chr2g0289341 28.514 249 154 6 57 293 3 239 3.43e-31 118
Msa1445310 MtrunA17_Chr2g0314391 29.583 240 159 5 61 291 70 308 4.42e-31 119
Msa1445310 MtrunA17_Chr7g0239111 29.339 242 159 7 59 291 53 291 5.11e-31 119
Msa1445310 MtrunA17_Chr7g0239101 30.041 243 156 7 59 291 53 291 7.48e-31 118
Msa1445310 MtrunA17_Chr2g0314401 29.461 241 158 6 61 291 51 289 1.09e-30 118
Msa1445310 MtrunA17_Chr5g0424201 30.545 275 163 7 34 291 18 281 1.29e-30 117
Msa1445310 MtrunA17_Chr5g0398291 29.508 244 156 6 61 289 47 289 1.50e-30 117
Msa1445310 MtrunA17_Chr3g0087031 33.068 251 136 10 60 291 59 296 3.80e-30 116
Msa1445310 MtrunA17_Chr3g0145171 29.339 242 158 6 61 291 52 291 6.99e-30 115
Msa1445310 MtrunA17_Chr8g0370721 31.727 249 154 8 55 291 47 291 7.67e-30 115
Msa1445310 MtrunA17_Chr5g0424211 28.623 276 169 7 34 291 16 281 9.18e-30 115
Msa1445310 MtrunA17_Chr7g0232161 30.962 239 151 7 61 289 60 294 9.23e-30 115
Msa1445310 MtrunA17_Chr2g0314381 29.218 243 156 6 61 291 77 315 1.40e-29 115
Msa1445310 MtrunA17_Chr4g0045461 31.274 259 146 5 61 291 26 280 2.18e-29 114
Msa1445310 MtrunA17_Chr4g0064781 31.179 263 168 6 37 291 28 285 2.86e-29 114
Msa1445310 MtrunA17_Chr7g0239121 29.630 243 158 7 59 291 49 288 3.69e-29 114
Msa1445310 MtrunA17_Chr3g0126761 41.732 127 72 2 167 291 42 168 4.50e-29 110
Msa1445310 MtrunA17_Chr7g0239821 29.218 243 158 8 59 291 62 300 5.49e-29 114
Msa1445310 MtrunA17_Chr8g0370711 30.645 248 158 7 55 291 47 291 2.05e-28 112
Msa1445310 MtrunA17_Chr1g0204181 29.762 252 151 4 61 291 59 305 4.64e-28 111
Msa1445310 MtrunA17_Chr3g0114871 29.851 268 165 7 36 291 18 274 4.88e-27 106
Msa1445310 MtrunA17_Chr2g0296371 26.394 269 161 7 45 291 38 291 7.38e-27 107
Msa1445310 MtrunA17_Chr1g0148771 31.373 255 142 9 54 291 56 294 1.11e-26 107
Msa1445310 MtrunA17_Chr3g0092531 29.719 249 148 5 61 293 6 243 1.46e-26 106
Msa1445310 MtrunA17_Chr3g0130391 31.154 260 144 9 62 295 67 317 1.68e-26 107
Msa1445310 MtrunA17_Chr8g0358941 29.924 264 134 10 59 291 25 268 4.00e-26 105
Msa1445310 MtrunA17_Chr4g0068891 31.474 251 149 10 61 296 20 262 4.73e-26 105
Msa1445310 MtrunA17_Chr6g0474391 28.226 248 160 4 61 291 64 310 6.19e-26 105
Msa1445310 MtrunA17_Chr1g0191201 30.508 236 144 6 78 296 76 308 9.03e-26 105
Msa1445310 MtrunA17_Chr3g0125421 32.917 240 119 9 78 291 59 282 6.64e-25 102
Msa1445310 MtrunA17_Chr7g0239091 27.119 236 158 5 61 291 160 386 9.32e-25 103
Msa1445310 MtrunA17_Chr5g0420721 37.415 147 79 5 151 291 46 185 1.41e-24 99.8
Msa1445310 MtrunA17_Chr2g0314371 29.323 266 146 8 61 291 52 310 1.57e-24 100
Msa1445310 MtrunA17_Chr8g0348951 31.301 246 152 7 58 291 7 247 1.80e-24 100
Msa1445310 MtrunA17_Chr3g0145181 31.496 254 157 10 52 291 41 291 7.66e-24 99.4
Msa1445310 MtrunA17_Chr6g0488511 26.939 245 158 8 60 291 2 238 1.10e-23 98.2
Msa1445310 MtrunA17_Chr2g0313111 27.200 250 151 9 59 291 26 261 1.87e-23 97.8
Msa1445310 MtrunA17_Chr3g0105281 28.458 253 143 8 61 293 34 268 6.21e-23 96.7
Msa1445310 MtrunA17_Chr7g0247741 30.952 252 154 7 53 291 3 247 6.83e-23 96.3
Msa1445310 MtrunA17_Chr5g0407781 28.016 257 130 7 60 290 4 231 7.14e-23 95.9
Msa1445310 MtrunA17_Chr3g0145201 30.357 224 144 7 77 291 706 926 7.45e-23 98.6
Msa1445310 MtrunA17_Chr5g0394071 37.600 125 78 0 171 295 4 128 8.72e-23 93.2
Msa1445310 MtrunA17_Chr8g0351101 27.517 298 161 8 27 291 24 299 2.06e-22 95.9
Msa1445310 MtrunA17_Chr7g0239071 27.556 225 145 6 78 291 19 236 3.21e-22 94.4
Msa1445310 MtrunA17_Chr3g0114861 30.672 238 155 5 60 289 39 274 1.69e-21 92.8
Msa1445310 MtrunA17_Chr4g0052251 26.740 273 166 9 39 293 13 269 1.98e-21 92.4
Msa1445310 MtrunA17_Chr5g0407731 28.632 234 156 6 61 290 33 259 5.37e-21 91.3
Msa1445310 MtrunA17_Chr1g0194321 28.625 269 150 10 53 291 12 268 8.08e-21 90.9
Msa1445310 MtrunA17_Chr4g0037611 41.346 104 60 1 189 291 11 114 8.72e-21 87.4
Msa1445310 MtrunA17_Chr1g0161101 40.769 130 68 1 162 291 354 474 5.94e-20 89.7
Msa1445310 MtrunA17_Chr7g0233661 39.796 98 59 0 194 291 1 98 2.26e-19 83.2
Msa1445310 MtrunA17_Chr2g0311611 49.275 69 28 1 216 277 3 71 2.49e-19 80.5
Msa1445310 MtrunA17_Chr4g0075471 42.308 78 44 1 217 293 32 109 6.50e-19 82.0
Msa1445310 MtrunA17_Chr6g0486831 24.752 303 139 10 46 291 6 276 1.56e-18 84.3
Msa1445310 MtrunA17_Chr1g0170631 32.283 127 83 2 167 291 1 126 1.67e-18 81.6
Msa1445310 MtrunA17_Chr8g0384481 27.600 250 156 7 61 291 59 302 1.99e-18 84.3
Msa1445310 MtrunA17_Chr3g0092581 36.842 114 68 2 182 293 4 115 6.15e-18 80.1
Msa1445310 MtrunA17_Chr7g0219991 38.318 107 64 2 170 275 249 354 6.77e-18 82.8
Msa1445310 MtrunA17_Chr7g0252371 58.537 82 33 1 174 254 3 84 9.40e-18 77.4
Msa1445310 MtrunA17_Chr5g0420881 41.558 77 44 1 216 291 3 79 1.29e-17 78.2
Msa1445310 MtrunA17_Chr2g0311821 50.000 84 36 2 71 152 22 101 1.29e-17 77.8
Msa1445310 MtrunA17_Chr8g0384461 25.253 297 184 8 21 291 7 291 2.00e-17 81.6
Msa1445310 MtrunA17_Chr2g0293931 34.307 137 77 6 172 296 10 145 9.11e-17 77.4
Msa1445310 MtrunA17_Chr2g0319521 32.110 109 74 0 169 277 16 124 9.44e-17 75.5
Msa1445310 MtrunA17_Chr8g0389941 25.794 252 162 7 64 291 37 287 5.76e-16 77.0
Msa1445310 MtrunA17_Chr1g0158021 23.982 221 148 7 61 269 49 261 1.63e-15 74.7
Msa1445310 MtrunA17_Chr1g0158011 32.258 124 81 3 171 291 72 195 2.38e-15 74.3
Msa1445310 MtrunA17_Chr4g0064771 34.677 124 79 2 170 291 27 150 8.12e-15 72.0
Msa1445310 MtrunA17_Chr4g0055871 24.400 250 162 7 61 291 9 250 1.04e-14 73.2
Msa1445310 MtrunA17_Chr8g0375581 37.209 86 53 1 190 274 1 86 1.61e-13 65.1
Msa1445310 MtrunA17_Chr2g0311621 31.579 95 65 0 24 118 21 115 6.44e-12 61.6
Msa1445310 MtrunA17_Chr4g0004071 25.000 248 160 8 61 291 9 247 9.85e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1445310 AT1G06620.1 55.068 296 126 3 2 291 3 297 2.25e-116 339
Msa1445310 AT1G06620.2 54.093 281 122 3 2 276 3 282 1.28e-108 317
Msa1445310 AT1G03400.1 52.128 282 130 3 11 291 6 283 1.93e-106 314
Msa1445310 AT1G06650.2 50.519 289 135 2 11 291 12 300 3.97e-106 313
Msa1445310 AT1G03410.2 52.759 290 126 4 11 291 6 293 7.57e-106 313
Msa1445310 AT1G03410.1 52.759 290 126 4 11 291 43 330 2.20e-105 313
Msa1445310 AT2G30830.1 51.220 287 131 2 11 291 7 290 4.72e-105 310
Msa1445310 AT5G59540.1 51.943 283 129 3 16 291 16 298 7.51e-103 305
Msa1445310 AT3G61400.1 49.175 303 141 4 1 291 1 302 2.48e-102 304
Msa1445310 AT5G43450.1 51.429 280 132 2 15 290 14 293 5.06e-102 303
Msa1445310 AT1G06640.1 50.690 290 133 3 11 291 12 300 1.15e-100 300
Msa1445310 AT1G04350.1 49.645 282 139 2 13 291 10 291 2.39e-100 298
Msa1445310 AT2G30840.1 50.000 288 137 1 11 291 7 294 3.93e-100 298
Msa1445310 AT1G03400.2 46.926 309 133 2 11 291 6 311 8.26e-100 298
Msa1445310 AT1G06650.1 49.455 275 131 2 11 277 12 286 1.82e-98 292
Msa1445310 AT5G59530.1 50.515 291 128 6 16 295 15 300 9.43e-98 292
Msa1445310 AT2G25450.1 47.552 286 143 3 11 291 7 290 1.94e-97 291
Msa1445310 AT5G43440.1 50.000 284 135 4 14 290 13 296 3.79e-97 290
Msa1445310 AT1G06645.1 49.135 289 136 3 11 291 25 310 4.83e-96 288
Msa1445310 AT3G61400.2 48.443 289 136 4 1 277 1 288 1.19e-95 284
Msa1445310 AT5G43450.2 49.817 273 133 2 15 283 14 286 2.23e-95 283
Msa1445310 AT5G59540.2 50.929 269 125 3 16 277 16 284 3.34e-95 283
Msa1445310 AT2G30840.3 48.264 288 136 2 11 291 7 288 5.28e-94 282
Msa1445310 AT1G04380.1 51.538 260 121 3 34 291 21 277 4.81e-93 279
Msa1445310 AT1G06640.2 49.818 275 128 3 11 276 12 285 5.91e-93 278
Msa1445310 AT1G06640.3 49.275 276 130 3 11 277 12 286 2.78e-92 275
Msa1445310 AT2G30840.2 48.718 273 133 1 11 276 7 279 3.20e-91 273
Msa1445310 AT5G43440.2 48.727 275 134 4 14 281 13 287 1.90e-90 271
Msa1445310 AT1G04380.2 49.194 248 121 3 34 279 21 265 2.82e-84 254
Msa1445310 AT3G13610.1 36.462 277 161 6 24 291 26 296 3.43e-53 177
Msa1445310 AT1G55290.1 35.252 278 164 5 24 291 25 296 5.97e-53 177
Msa1445310 AT4G10500.1 37.959 245 142 5 55 291 38 280 3.41e-50 169
Msa1445310 AT5G24530.1 38.750 240 143 2 56 291 33 272 2.15e-49 167
Msa1445310 AT4G10490.1 34.454 238 150 3 60 291 41 278 4.03e-49 167
Msa1445310 AT3G12900.1 33.579 271 175 4 24 290 21 290 2.31e-46 160
Msa1445310 AT2G36690.2 33.449 287 168 6 22 291 18 298 6.87e-45 156
Msa1445310 AT2G36690.1 33.449 287 168 6 22 291 18 298 6.87e-45 156
Msa1445310 AT2G44800.1 33.447 293 180 8 10 291 1 289 1.90e-43 152
Msa1445310 AT4G16330.2 33.333 240 150 5 60 291 66 303 4.10e-40 143
Msa1445310 AT3G51240.1 33.884 242 148 4 61 291 38 278 1.35e-39 142
Msa1445310 AT3G60290.1 32.107 299 186 9 10 295 1 295 1.33e-38 139
Msa1445310 AT3G19000.1 32.685 257 142 7 61 291 32 283 1.71e-38 139
Msa1445310 AT4G21200.1 32.377 244 141 6 61 291 42 274 1.91e-37 136
Msa1445310 AT5G05600.1 30.537 298 188 7 9 291 11 304 1.94e-37 137
Msa1445310 AT3G11180.2 32.975 279 174 6 25 291 56 333 9.88e-37 135
Msa1445310 AT3G11180.1 32.975 279 174 6 25 291 56 333 9.99e-37 135
Msa1445310 AT2G38240.1 30.325 277 181 8 25 291 12 286 2.10e-36 133
Msa1445310 AT4G25310.1 34.375 224 135 7 75 291 70 288 9.75e-36 132
Msa1445310 AT4G22880.1 29.897 291 170 8 25 289 7 289 3.84e-35 130
Msa1445310 AT4G22880.2 29.897 291 170 8 25 289 7 289 3.84e-35 130
Msa1445310 AT4G22880.3 29.897 291 170 8 25 289 7 289 3.84e-35 130
Msa1445310 AT1G17020.1 29.893 281 172 10 28 291 21 293 4.96e-35 130
Msa1445310 AT1G50960.1 30.241 291 146 9 34 291 9 275 7.38e-35 129
Msa1445310 AT3G55970.1 30.169 295 184 8 16 291 5 296 1.07e-34 129
Msa1445310 AT1G78550.1 29.496 278 175 7 28 291 21 291 2.20e-34 128
Msa1445310 AT4G25300.1 30.882 272 170 9 33 291 25 291 4.07e-34 127
Msa1445310 AT1G77330.1 30.894 246 149 7 60 291 2 240 7.68e-34 125
Msa1445310 AT1G05010.1 31.301 246 148 8 60 293 3 239 1.30e-33 125
Msa1445310 AT3G19000.2 31.276 243 136 7 61 277 32 269 4.69e-33 123
Msa1445310 AT5G07480.1 31.496 254 154 7 55 291 38 288 8.05e-33 124
Msa1445310 AT1G17010.1 29.242 277 179 6 28 291 21 293 2.55e-32 122
Msa1445310 AT5G12270.1 29.078 282 186 7 20 291 16 293 6.15e-32 122
Msa1445310 AT5G05600.2 29.825 285 179 8 9 277 11 290 9.89e-32 119
Msa1445310 AT1G15550.1 31.128 257 148 9 51 290 47 291 2.05e-31 120
Msa1445310 AT3G21420.1 31.148 244 153 6 61 291 55 296 6.47e-31 119
Msa1445310 AT4G25420.1 30.769 247 154 3 61 291 61 306 6.69e-31 119
Msa1445310 AT1G12010.1 29.032 248 149 8 61 293 7 242 8.61e-31 118
Msa1445310 AT1G62380.1 29.752 242 155 8 61 293 7 242 1.12e-30 117
Msa1445310 AT5G08640.2 30.328 244 153 6 60 291 42 280 1.41e-30 117
Msa1445310 AT5G08640.1 30.328 244 153 6 60 291 42 280 1.41e-30 117
Msa1445310 AT3G19010.1 29.057 265 157 8 55 291 17 278 3.56e-30 117
Msa1445310 AT3G19010.4 29.057 265 157 8 55 291 17 278 3.56e-30 117
Msa1445310 AT5G63590.1 32.258 248 139 7 61 290 14 250 6.29e-30 115
Msa1445310 AT3G55970.2 30.147 272 168 8 25 277 14 282 2.07e-29 114
Msa1445310 AT1G60980.1 30.128 312 165 15 11 291 17 306 2.34e-29 115
Msa1445310 AT3G51240.2 34.118 170 106 2 128 291 25 194 5.08e-29 112
Msa1445310 AT5G07200.1 30.859 256 144 9 61 291 58 305 6.08e-29 114
Msa1445310 AT1G30040.1 28.016 257 163 6 57 295 19 271 1.26e-28 112
Msa1445310 AT5G63595.1 29.249 253 146 7 47 291 13 240 1.51e-28 111
Msa1445310 AT1G80330.1 32.258 248 142 7 60 290 48 286 5.94e-28 111
Msa1445310 AT4G16330.1 36.129 155 95 2 141 291 43 197 1.50e-27 107
Msa1445310 AT1G78440.1 28.462 260 149 8 55 291 12 257 2.71e-27 108
Msa1445310 AT4G25420.2 30.043 233 146 3 61 277 61 292 5.42e-27 107
Msa1445310 AT1G80340.1 31.522 276 157 9 43 296 26 291 9.50e-27 107
Msa1445310 AT1G78550.2 30.233 215 134 5 87 291 5 213 1.19e-26 105
Msa1445310 AT5G63600.1 29.876 241 148 6 61 290 33 263 3.01e-26 105
Msa1445310 AT2G19590.1 30.165 242 149 10 61 291 11 243 1.00e-25 104
Msa1445310 AT3G47190.1 28.214 280 151 9 45 295 17 275 1.20e-25 104
Msa1445310 AT5G63600.2 29.752 242 148 7 61 290 33 264 6.83e-25 102
Msa1445310 AT5G51810.1 28.395 243 161 3 61 291 63 304 1.91e-24 102
Msa1445310 AT5G63580.2 32.444 225 135 7 60 273 18 236 3.29e-24 98.6
Msa1445310 AT3G19010.2 27.165 254 154 8 55 280 17 267 3.52e-24 99.8
Msa1445310 AT5G63580.1 32.444 225 135 7 60 273 18 236 4.04e-24 98.6
Msa1445310 AT5G58660.1 27.170 265 157 7 61 295 34 292 5.89e-24 100
Msa1445310 AT3G19010.3 29.020 255 140 11 55 291 17 248 1.10e-23 99.0
Msa1445310 AT2G34555.1 31.769 277 146 11 37 291 7 262 1.15e-23 99.0
Msa1445310 AT5G20400.1 28.099 242 162 5 61 291 45 285 1.62e-23 99.0
Msa1445310 AT4G25310.2 30.942 223 116 8 75 291 70 260 4.53e-23 97.4
Msa1445310 AT1G47990.1 31.600 250 141 9 61 291 15 253 3.80e-22 94.7
Msa1445310 AT5G20550.1 28.571 245 158 8 61 291 45 286 3.87e-22 95.1
Msa1445310 AT4G25300.2 37.795 127 73 3 169 291 73 197 5.61e-22 93.2
Msa1445310 AT5G51810.2 27.586 232 155 3 61 280 63 293 6.83e-22 93.6
Msa1445310 AT1G30040.2 25.941 239 155 6 57 277 19 253 6.83e-22 92.8
Msa1445310 AT1G44090.1 28.295 258 146 9 61 291 63 308 1.48e-20 90.9
Msa1445310 AT1G49390.1 26.446 242 166 5 61 291 45 285 2.17e-20 90.1
Msa1445310 AT4G21690.1 26.538 260 167 9 50 291 36 289 3.59e-20 89.7
Msa1445310 AT4G23340.1 28.395 243 156 7 61 291 10 246 7.16e-20 88.6
Msa1445310 AT2G19590.2 30.189 212 131 9 88 291 26 228 1.10e-19 87.4
Msa1445310 AT5G54000.2 27.556 225 156 4 73 291 63 286 1.33e-19 87.8
Msa1445310 AT1G14130.1 25.301 249 159 8 55 290 3 237 3.11e-19 86.3
Msa1445310 AT5G07480.2 30.168 179 114 4 123 291 2 179 1.07e-18 84.0
Msa1445310 AT5G58660.2 25.911 247 147 7 61 277 34 274 1.08e-18 84.3
Msa1445310 AT1G14120.2 26.749 243 151 8 61 290 8 236 1.15e-18 84.7
Msa1445310 AT1G14120.1 26.749 243 151 8 61 290 8 236 1.15e-18 84.7
Msa1445310 AT1G14120.3 26.749 243 151 8 61 290 8 236 1.15e-18 84.7
Msa1445310 AT1G49390.2 25.837 209 144 5 91 291 1 206 9.19e-16 75.9
Msa1445310 AT5G54000.1 27.053 207 144 4 91 291 1 206 1.15e-15 75.9
Msa1445310 AT5G51310.1 25.490 255 164 6 61 296 5 252 2.88e-15 75.5
Msa1445310 AT4G23340.2 34.146 123 76 3 172 291 8 128 4.49e-13 67.4
Msa1445310 AT1G35190.1 26.054 261 161 7 59 291 10 266 1.49e-12 67.4

Find 93 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTTATCTCTTGAGTAAA+AGG 0.149609 tig0031039:-8949 Msa1445310:intergenic
TCTGTTAACAATTCCTTTAT+TGG 0.183749 tig0031039:-12935 Msa1445310:intergenic
CATACTATTGGTATCTCTTC+TGG 0.195656 tig0031039:-9071 Msa1445310:intergenic
GGAGCTCTTGTTGTAAATAT+TGG 0.201924 tig0031039:+11696 Msa1445310:CDS
TATACTATATTTAATTAGTT+TGG 0.228100 tig0031039:+13210 Msa1445310:three_prime_UTR
GATTCCAAAACTGGTGTAAA+AGG 0.232362 tig0031039:+8648 Msa1445310:CDS
TCTCTAATGGGAAGTTGTTT+AGG 0.233537 tig0031039:+8988 Msa1445310:CDS
AAAGTTAGGTATTTCTCTAA+TGG 0.259177 tig0031039:+8975 Msa1445310:CDS
GAGCTCTTGTTGTAAATATT+GGG 0.262189 tig0031039:+11697 Msa1445310:CDS
CAGCACATTCCATTTCATTA+AGG 0.281915 tig0031039:-11503 Msa1445310:intergenic
CTCTAATGGGAAGTTGTTTA+GGG 0.283452 tig0031039:+8989 Msa1445310:CDS
TTCTAATGATGCCATAGTTT+TGG 0.287336 tig0031039:-8583 Msa1445310:intergenic
TCAATCAACTCAAAATAAAT+TGG 0.288765 tig0031039:-13179 Msa1445310:intergenic
TGGTATTCCACTTCATGTTT+TGG 0.295034 tig0031039:+8869 Msa1445310:CDS
CATCTGCTTCACAACTTTAA+CGG 0.295899 tig0031039:-13049 Msa1445310:intergenic
TCTTGGAAGCATTCTTGATT+TGG 0.301866 tig0031039:-8818 Msa1445310:intergenic
CCCCGAACCTGAGTTAACTA+TGG 0.305311 tig0031039:+11563 Msa1445310:CDS
CCCATAGTTAACTCAGGTTC+GGG 0.305478 tig0031039:-11564 Msa1445310:intergenic
TTAGGGACATGGCTGCTAAT+TGG 0.316905 tig0031039:+9006 Msa1445310:CDS
TCAAGAATGCTTCCAAGAAC+TGG 0.320842 tig0031039:+8823 Msa1445310:CDS
GCATTTGATGATTCCAAAAC+TGG 0.328463 tig0031039:+8639 Msa1445310:CDS
AAGAAAACCCTCCAATCTAT+AGG 0.335299 tig0031039:+12957 Msa1445310:three_prime_UTR
GAGATAAAGATAAGAAAGTT+AGG 0.357106 tig0031039:+8961 Msa1445310:CDS
TCTTTCTTACCTTAATGAAA+TGG 0.361413 tig0031039:+11494 Msa1445310:CDS
ACTGAATTTCTATGAATTAG+TGG 0.362034 tig0031039:-8432 Msa1445310:intergenic
ATACTTCTTCAAAATCAAAT+AGG 0.364008 tig0031039:+11621 Msa1445310:CDS
TCTTCTGGATTGGGAAGATC+AGG 0.374718 tig0031039:-9056 Msa1445310:intergenic
TATTATGCAAAAGGCATTGC+TGG 0.382691 tig0031039:+13010 Msa1445310:three_prime_UTR
TCCCATAGTTAACTCAGGTT+CGG 0.383078 tig0031039:-11565 Msa1445310:intergenic
CCTGAGTTAACTATGGGAAT+TGG 0.393784 tig0031039:+11570 Msa1445310:CDS
AGATGATCAATGGAATTTGT+AGG 0.399507 tig0031039:+8895 Msa1445310:CDS
TATCCACAGCTCCAAAACTA+TGG 0.401193 tig0031039:+8572 Msa1445310:exon
AAGTTAGGTATTTCTCTAAT+GGG 0.405017 tig0031039:+8976 Msa1445310:CDS
TATTGGTATCTCTTCTGGAT+TGG 0.406900 tig0031039:-9066 Msa1445310:intergenic
ATAGTAATATCCCTATAGAT+TGG 0.407931 tig0031039:-12968 Msa1445310:intergenic
ATTGGTATCTCTTCTGGATT+GGG 0.410141 tig0031039:-9065 Msa1445310:intergenic
AGAAAACCCTCCAATCTATA+GGG 0.413831 tig0031039:+12958 Msa1445310:three_prime_UTR
TTGACAAATTATTATGCAAA+AGG 0.417349 tig0031039:+13001 Msa1445310:three_prime_UTR
GTAAAAGGTATACTAGATTC+TGG 0.426090 tig0031039:+8663 Msa1445310:CDS
GAACATTACCTGCATACTAT+TGG 0.433323 tig0031039:-9083 Msa1445310:intergenic
TGCTGAAGCACTTTATATCA+TGG 0.441493 tig0031039:+11521 Msa1445310:CDS
GAGTTATTGTCAGAAGCTCT+TGG 0.442551 tig0031039:+11465 Msa1445310:CDS
AAGGTTGCTACAGATATTCT+AGG 0.446873 tig0031039:-12866 Msa1445310:intergenic
GATGGGGATGGTGGTGAAGT+TGG 0.456154 tig0031039:-8757 Msa1445310:intergenic
TCTTTATCTCTTGAGTAAAA+GGG 0.460610 tig0031039:-8948 Msa1445310:intergenic
TTGAAGAAGTATTGTCATGA+AGG 0.471325 tig0031039:-11610 Msa1445310:intergenic
CATTAAGGTAAGAAAGATTG+AGG 0.478852 tig0031039:-11488 Msa1445310:intergenic
TTCAAAACAAGTAAAAGCAT+TGG 0.479034 tig0031039:+11428 Msa1445310:CDS
GAATACCATGATTGATCACT+TGG 0.479795 tig0031039:-8854 Msa1445310:intergenic
TCAAAACAAGTAAAAGCATT+GGG 0.480528 tig0031039:+11429 Msa1445310:CDS
GATGTGTTGAAGATCTATGA+TGG 0.486480 tig0031039:-8775 Msa1445310:intergenic
ATCTCATCCAAAACATGAAG+TGG 0.487678 tig0031039:-8876 Msa1445310:intergenic
TGATTTCAATATATGAAAGC+TGG 0.490767 tig0031039:-13247 Msa1445310:intergenic
CAAGAATGCTTCCAAGAACT+GGG 0.492609 tig0031039:+8824 Msa1445310:CDS
AAGTTCTTCATGAGAACCAA+TGG 0.503137 tig0031039:+11652 Msa1445310:CDS
TATAGTAAAATTCATAAAGA+AGG 0.506246 tig0031039:-12885 Msa1445310:intergenic
GGGACATGGCTGCTAATTGG+AGG 0.507047 tig0031039:+9009 Msa1445310:CDS
AAAGTTGTGAAGCAGATGTA+AGG 0.512022 tig0031039:+13054 Msa1445310:three_prime_UTR
GACAAGGTTGCTATGGTGAA+TGG 0.517413 tig0031039:-8537 Msa1445310:intergenic
CCAATTCCCATAGTTAACTC+AGG 0.517642 tig0031039:-11570 Msa1445310:intergenic
ACCGGGTTGTCAAGGAATAT+AGG 0.528197 tig0031039:+12842 Msa1445310:CDS
AATTGAAGACAAGGTTGCTA+TGG 0.529492 tig0031039:-8544 Msa1445310:intergenic
CATTCATCAGTGTTAATCAC+CGG 0.530647 tig0031039:+12824 Msa1445310:CDS
GTGTATTTGTAGAGATATTG+TGG 0.538778 tig0031039:+11398 Msa1445310:intron
CTTCTGGATTGGGAAGATCA+GGG 0.546286 tig0031039:-9055 Msa1445310:intergenic
TGTTAATCACCGGGTTGTCA+AGG 0.546627 tig0031039:+12834 Msa1445310:CDS
ACAACAAGAGCTCCGTGCAC+TGG 0.549420 tig0031039:-11687 Msa1445310:intergenic
AAATATTGGGGATATCCTAC+AGG 0.550323 tig0031039:+11710 Msa1445310:CDS
AGTTCTTCATGAGAACCAAT+GGG 0.552016 tig0031039:+11653 Msa1445310:CDS
AAGAGATACCAATAGTATGC+AGG 0.552701 tig0031039:+9075 Msa1445310:CDS
TGGGAAGTTGTTTAGGGACA+TGG 0.554684 tig0031039:+8995 Msa1445310:CDS
TAATATCCCTATAGATTGGA+GGG 0.558690 tig0031039:-12964 Msa1445310:intergenic
ACCTATATTCCTTGACAACC+CGG 0.562249 tig0031039:-12843 Msa1445310:intergenic
AAGATCTATGATGGGGATGG+TGG 0.562439 tig0031039:-8766 Msa1445310:intergenic
CCCGAACCTGAGTTAACTAT+GGG 0.570034 tig0031039:+11564 Msa1445310:CDS
GCTGAAGCACTTTATATCAT+GGG 0.576961 tig0031039:+11522 Msa1445310:CDS
ATGTGTTGAAGATCTATGAT+GGG 0.577444 tig0031039:-8774 Msa1445310:intergenic
GTAATATCCCTATAGATTGG+AGG 0.581918 tig0031039:-12965 Msa1445310:intergenic
AGCTCTTGTTGTAAATATTG+GGG 0.583098 tig0031039:+11698 Msa1445310:CDS
CTGGTGGAACATTGACCCAT+TGG 0.594414 tig0031039:-11668 Msa1445310:intergenic
AACTCAGGTTCGGGGCATTG+TGG 0.597309 tig0031039:-11555 Msa1445310:intergenic
GTCAATGTTCCACCAGTGCA+CGG 0.601495 tig0031039:+11675 Msa1445310:CDS
GTGAAGTTGGACTCATCAGT+AGG 0.617901 tig0031039:-8744 Msa1445310:intergenic
ACAAGAGCTCCGTGCACTGG+TGG 0.621847 tig0031039:-11684 Msa1445310:intergenic
CTTCTTCAAAATCAAATAGG+TGG 0.624190 tig0031039:+11624 Msa1445310:CDS
ATTCATCAGTGTTAATCACC+GGG 0.634131 tig0031039:+12825 Msa1445310:CDS
GGACATGGCTGCTAATTGGA+GGG 0.640115 tig0031039:+9010 Msa1445310:CDS
TTGAAGATCTATGATGGGGA+TGG 0.644460 tig0031039:-8769 Msa1445310:intergenic
CCATAGTTAACTCAGGTTCG+GGG 0.682315 tig0031039:-11563 Msa1445310:intergenic
AAGAATGCTTCCAAGAACTG+GGG 0.698663 tig0031039:+8825 Msa1445310:CDS
GATATGAACAATTGAAGACA+AGG 0.717787 tig0031039:-8553 Msa1445300:intergenic
GTGAATGGATTGTAACAGAG+TGG 0.750797 tig0031039:-8522 Msa1445300:intergenic
TGTGTTGAAGATCTATGATG+GGG 0.761699 tig0031039:-8773 Msa1445300:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTATTTTTTTTAGATTTAAT+AGG - tig0031039:8478-8497 Msa0478620:intergenic 10.0%
!!! ATTTAAATAGTAAGTTTTTA+TGG + tig0031039:9805-9824 Msa1445310:intron 10.0%
!!! TAATGAATAATTTCTTATTT+TGG + tig0031039:9874-9893 Msa1445310:intron 10.0%
!!! TTAAATAAATTAGTTTAAAC+AGG - tig0031039:12013-12032 Msa1445310:intergenic 10.0%
!! TATACTATATTTAATTAGTT+TGG + tig0031039:13210-13229 Msa1445310:three_prime_UTR 10.0%
!! TATTTACTTATGTTGAAATT+CGG - tig0031039:9390-9409 Msa1445310:intergenic 15.0%
!! TTTCAACATAAGTAAATAAA+AGG + tig0031039:9392-9411 Msa1445310:intron 15.0%
!! TATCAGTTATAATAGAAATT+TGG - tig0031039:9682-9701 Msa1445310:intergenic 15.0%
!! TTCTATTATAACTGATAATT+TGG + tig0031039:9685-9704 Msa1445310:intron 15.0%
!!! GATTTTGTTATTTTAAACAA+GGG - tig0031039:9939-9958 Msa1445310:intergenic 15.0%
!!! AGATTTTGTTATTTTAAACA+AGG - tig0031039:9940-9959 Msa1445310:intergenic 15.0%
!! ATGATTAAATATTTCAACAA+AGG - tig0031039:11149-11168 Msa1445310:intergenic 15.0%
!! ATACATCTTAAACTTATATA+AGG - tig0031039:11797-11816 Msa1445310:intergenic 15.0%
!!! AATCATCAAAATTTAAAGTA+TGG + tig0031039:11866-11885 Msa1445310:intron 15.0%
!! TCCTTTATATAAAATTTCAA+AGG + tig0031039:12653-12672 Msa1445310:intron 15.0%
!! CCTTTATATAAAATTTCAAA+GGG + tig0031039:12654-12673 Msa1445310:intron 15.0%
!! TATAGTAAAATTCATAAAGA+AGG - tig0031039:12888-12907 Msa1445310:intergenic 15.0%
!!! ATAAATAGAAGACTTTTGTA+AGG - tig0031039:9108-9127 Msa1445310:intergenic 20.0%
!!! AAAATCATAATGTTCGATTT+TGG - tig0031039:9743-9762 Msa1445310:intergenic 20.0%
!!! AATCGAACATTATGATTTTT+AGG + tig0031039:9744-9763 Msa1445310:intron 20.0%
!!! ATCGAACATTATGATTTTTA+GGG + tig0031039:9745-9764 Msa1445310:intron 20.0%
!!! AGAAGATTTTGTTTCATTTT+CGG - tig0031039:10353-10372 Msa1445310:intergenic 20.0%
!! ATCCTAATTCTGATTATTAT+TGG - tig0031039:10943-10962 Msa1445310:intergenic 20.0%
!! ATAATAATCAGAATTAGGAT+CGG + tig0031039:10943-10962 Msa1445310:intron 20.0%
!! CATAAAATCAAATAGTATTG+AGG - tig0031039:11178-11197 Msa1445310:intergenic 20.0%
!! TACAATTAAGAAGTGATTTA+AGG - tig0031039:11224-11243 Msa1445310:intergenic 20.0%
!! TTCAGTAAAAACAAAAGAAA+GGG - tig0031039:11372-11391 Msa1445310:intergenic 20.0%
!! TTTCAGTAAAAACAAAAGAA+AGG - tig0031039:11373-11392 Msa1445310:intergenic 20.0%
!! ATACTTCTTCAAAATCAAAT+AGG + tig0031039:11621-11640 Msa1445310:CDS 20.0%
!! AGATAAAAATGACTTATACT+TGG + tig0031039:11751-11770 Msa1445310:intron 20.0%
!!! ATCAAAATTTAAAGTATGGA+TGG + tig0031039:11870-11889 Msa1445310:intron 20.0%
!!! TTTAACTTATCTAATAGCAT+AGG + tig0031039:12028-12047 Msa1445310:intron 20.0%
!!! ATTATCCTTTGTTATAGAAA+TGG + tig0031039:12176-12195 Msa1445310:intron 20.0%
!! TTAAACCATTTCTATAACAA+AGG - tig0031039:12184-12203 Msa1445310:intergenic 20.0%
!! TAGGTGTTTAATAAAATCAT+TGG - tig0031039:12376-12395 Msa1445310:intergenic 20.0%
!!! TGTTCATTTTCATTATTGTA+CGG + tig0031039:12434-12453 Msa1445310:intron 20.0%
!!! TAACAGGATTTTAATCATAA+GGG - tig0031039:12533-12552 Msa1445310:intergenic 20.0%
!! AAATAACATACATGTTGAAA+TGG - tig0031039:12593-12612 Msa1445310:intergenic 20.0%
!!! CCCTTTGAAATTTTATATAA+AGG - tig0031039:12657-12676 Msa1445310:intergenic 20.0%
!! AAAAATTTATGGTCCAATAA+AGG + tig0031039:12922-12941 Msa1445310:three_prime_UTR 20.0%
!! TTGACAAATTATTATGCAAA+AGG + tig0031039:13001-13020 Msa1445310:three_prime_UTR 20.0%
!! TCAATCAACTCAAAATAAAT+TGG - tig0031039:13182-13201 Msa1445310:intergenic 20.0%
!!! ATTTATTTTGAGTTGATTGA+AGG + tig0031039:13182-13201 Msa1445310:three_prime_UTR 20.0%
! ACTGAATTTCTATGAATTAG+TGG - tig0031039:8435-8454 Msa0478620:intergenic 25.0%
! AAGTTAACATGAAAAATGGA+AGG - tig0031039:8702-8721 Msa1445310:intergenic 25.0%
!!! TTCCATTTTTCATGTTAACT+TGG + tig0031039:8701-8720 Msa1445310:CDS 25.0%
! TTCCAAGTTAACATGAAAAA+TGG - tig0031039:8706-8725 Msa1445310:intergenic 25.0%
! TCTTTATCTCTTGAGTAAAA+GGG - tig0031039:8951-8970 Msa1445310:intergenic 25.0%
! ATCTTTATCTCTTGAGTAAA+AGG - tig0031039:8952-8971 Msa1445310:intergenic 25.0%
! GAGATAAAGATAAGAAAGTT+AGG + tig0031039:8961-8980 Msa1445310:CDS 25.0%
! AAAGTTAGGTATTTCTCTAA+TGG + tig0031039:8975-8994 Msa1445310:CDS 25.0%
! AAGTTAGGTATTTCTCTAAT+GGG + tig0031039:8976-8995 Msa1445310:CDS 25.0%
!! GACCATGATTTATATTTTAC+TGG + tig0031039:9440-9459 Msa1445310:intron 25.0%
! CACCAGTAAAATATAAATCA+TGG - tig0031039:9445-9464 Msa1445310:intergenic 25.0%
!! ATTTATATTTTACTGGTGCA+TGG + tig0031039:9447-9466 Msa1445310:intron 25.0%
!! ACAAAATTTTATACCAGTTC+AGG - tig0031039:9552-9571 Msa1445310:intergenic 25.0%
!! GGTATAAAATTTTGTTGCAT+TGG + tig0031039:9557-9576 Msa1445310:intron 25.0%
! GTAAAGACTAAAGATAGTTT+CGG - tig0031039:9603-9622 Msa1445310:intergenic 25.0%
!! CATTTCGAAAAAGTACAATT+CGG - tig0031039:9632-9651 Msa1445310:intergenic 25.0%
! AATAGAAATTTGGTACAGTT+TGG - tig0031039:9672-9691 Msa1445310:intergenic 25.0%
! AACTGATAATTTGGATTGTT+AGG + tig0031039:9694-9713 Msa1445310:intron 25.0%
! GTACATATCAATATGCTATT+TGG - tig0031039:10326-10345 Msa1445310:intergenic 25.0%
! GAAAGAATGAAGAATAGAAA+GGG - tig0031039:10438-10457 Msa1445310:intergenic 25.0%
! CCAAAAGATATTATACAAAG+TGG - tig0031039:10465-10484 Msa1445310:intergenic 25.0%
!! CCACTTTGTATAATATCTTT+TGG + tig0031039:10462-10481 Msa1445310:intron 25.0%
!! AAATGATGAGGTCTTTTATA+AGG - tig0031039:10508-10527 Msa1445310:intergenic 25.0%
! AGTAAGAAAAGAGTGATTTA+TGG - tig0031039:10848-10867 Msa1445310:intergenic 25.0%
! TCAACAAAGGACTTAATTAT+AGG - tig0031039:11136-11155 Msa1445310:intergenic 25.0%
!! TTCAAAACAAGTAAAAGCAT+TGG + tig0031039:11428-11447 Msa1445310:CDS 25.0%
!!! TCAAAACAAGTAAAAGCATT+GGG + tig0031039:11429-11448 Msa1445310:CDS 25.0%
! TCTTTCTTACCTTAATGAAA+TGG + tig0031039:11494-11513 Msa1445310:CDS 25.0%
!!! TTTCTCTCTAGAACTTTATA+TGG - tig0031039:11823-11842 Msa1445310:intergenic 25.0%
! GGCAAAATTAGTTAAGAAAA+AGG - tig0031039:11923-11942 Msa1445310:intergenic 25.0%
! TTAAACTGTTTATCCAAACT+AGG + tig0031039:12248-12267 Msa1445310:intron 25.0%
! TCGAGGAATCTTAAATTATT+AGG + tig0031039:12350-12369 Msa1445310:intron 25.0%
!!! GTAACAGGATTTTAATCATA+AGG - tig0031039:12534-12553 Msa1445310:intergenic 25.0%
! TGCAAGATATATCATTCTTA+AGG + tig0031039:12694-12713 Msa1445310:intron 25.0%
! TATGTTCTTAATGATTCCAT+TGG - tig0031039:12728-12747 Msa1445310:intergenic 25.0%
!! TGAATCTTTAAGTTCTACTT+TGG - tig0031039:12753-12772 Msa1445310:intergenic 25.0%
! TCTGTTAACAATTCCTTTAT+TGG - tig0031039:12938-12957 Msa1445310:intergenic 25.0%
! ATAGTAATATCCCTATAGAT+TGG - tig0031039:12971-12990 Msa1445310:intergenic 25.0%
! TGATTTCAATATATGAAAGC+TGG - tig0031039:13250-13269 Msa1445310:intergenic 25.0%
GATATGAACAATTGAAGACA+AGG - tig0031039:8556-8575 Msa0478620:intergenic 30.0%
! TTCTAATGATGCCATAGTTT+TGG - tig0031039:8586-8605 Msa1445310:intergenic 30.0%
! TATACCTTTTACACCAGTTT+TGG - tig0031039:8655-8674 Msa1445310:intergenic 30.0%
! GTAAAAGGTATACTAGATTC+TGG + tig0031039:8663-8682 Msa1445310:CDS 30.0%
ATGTGTTGAAGATCTATGAT+GGG - tig0031039:8777-8796 Msa1445310:intergenic 30.0%
! TTTTTCCAAGTGATCAATCA+TGG + tig0031039:8849-8868 Msa1445310:CDS 30.0%
AGATGATCAATGGAATTTGT+AGG + tig0031039:8895-8914 Msa1445310:CDS 30.0%
!!! TTTTTTTTGTGTTAACCCTC+CGG + tig0031039:9145-9164 Msa1445310:intron 30.0%
AAAAAAGCTAAGTCTTGCAT+CGG + tig0031039:9219-9238 Msa1445310:intron 30.0%
ATTGGTAAAAGTTTATGCAG+AGG + tig0031039:9254-9273 Msa1445310:intron 30.0%
ATGGAAAATACCATTGTGAT+TGG - tig0031039:10062-10081 Msa1445310:intergenic 30.0%
AAGTAAAAAATGAACCGCAA+TGG - tig0031039:10081-10100 Msa1445310:intergenic 30.0%
! ACATCTTTTAATCTACCTAG+AGG + tig0031039:10105-10124 Msa1445310:intron 30.0%
! CAATGGACAAACCATTATTT+TGG + tig0031039:10247-10266 Msa1445310:intron 30.0%
GGAAAGAATGAAGAATAGAA+AGG - tig0031039:10439-10458 Msa1445310:intergenic 30.0%
AGATATTATACAAAGTGGAG+AGG - tig0031039:10460-10479 Msa1445310:intergenic 30.0%
AAGACCTCATCATTTGAAAA+AGG + tig0031039:10513-10532 Msa1445310:intron 30.0%
CTTTATTCAAATCAGGAGAA+AGG - tig0031039:10577-10596 Msa1445310:intergenic 30.0%
CTTCTCACTTTATTCAAATC+AGG - tig0031039:10584-10603 Msa1445310:intergenic 30.0%
! CTGATTTGAATAAAGTGAGA+AGG + tig0031039:10582-10601 Msa1445310:intron 30.0%
!! TTGTTATTGGTTCATAGCTT+TGG - tig0031039:10669-10688 Msa1445310:intergenic 30.0%
GAATATCAGAAGGTGAAAAA+AGG + tig0031039:10720-10739 Msa1445310:intron 30.0%
! TTTTCTTACTGAACAGAACA+AGG + tig0031039:10858-10877 Msa1445310:intron 30.0%
AATCATCTGAGAGATAATCA+TGG - tig0031039:10896-10915 Msa1445310:intergenic 30.0%
ATGATTATCTCTCAGATGAT+TGG + tig0031039:10895-10914 Msa1445310:intron 30.0%
GGCCAATAATAATCAGAATT+AGG + tig0031039:10938-10957 Msa1445310:intron 30.0%
AGGGTCTACTATTGATATAA+GGG - tig0031039:11353-11372 Msa1445310:intergenic 30.0%
AAGGGTCTACTATTGATATA+AGG - tig0031039:11354-11373 Msa1445310:intergenic 30.0%
GTGTATTTGTAGAGATATTG+TGG + tig0031039:11398-11417 Msa1445310:intron 30.0%
CATTAAGGTAAGAAAGATTG+AGG - tig0031039:11491-11510 Msa1445310:intergenic 30.0%
!! TTGAAGAAGTATTGTCATGA+AGG - tig0031039:11613-11632 Msa1445310:intergenic 30.0%
CTTCTTCAAAATCAAATAGG+TGG + tig0031039:11624-11643 Msa1445310:CDS 30.0%
! GAGCTCTTGTTGTAAATATT+GGG + tig0031039:11697-11716 Msa1445310:CDS 30.0%
! AGCTCTTGTTGTAAATATTG+GGG + tig0031039:11698-11717 Msa1445310:CDS 30.0%
! TTTTATCTCAAAACCGATCA+TGG - tig0031039:11739-11758 Msa1445310:intergenic 30.0%
TACATAAAGCAAATGCTGTT+TGG - tig0031039:11961-11980 Msa1445310:intergenic 30.0%
TTGCTTTATGTAGATGCAAA+AGG + tig0031039:11969-11988 Msa1445310:intron 30.0%
TGCTTTATGTAGATGCAAAA+GGG + tig0031039:11970-11989 Msa1445310:intron 30.0%
CCTGTCTTTCTTATAAATGA+AGG - tig0031039:12302-12321 Msa1445310:intergenic 30.0%
CCTTCATTTATAAGAAAGAC+AGG + tig0031039:12299-12318 Msa1445310:intron 30.0%
AAACTTTCATTGTCTGACAT+AGG - tig0031039:12395-12414 Msa1445310:intergenic 30.0%
GTTGAGATAAAACTTTGCAA+AGG - tig0031039:12485-12504 Msa1445310:intergenic 30.0%
TAAGGAAAATGGATAGTAAC+AGG - tig0031039:12549-12568 Msa1445310:intergenic 30.0%
! ATCCATTTTCCTTAATCTTC+TGG + tig0031039:12555-12574 Msa1445310:intron 30.0%
AAAGGATGAAATTGTGTACA+TGG - tig0031039:12639-12658 Msa1445310:intergenic 30.0%
GAATGCACGTCAAAAATTTA+TGG + tig0031039:12911-12930 Msa1445310:three_prime_UTR 30.0%
TAATATCCCTATAGATTGGA+GGG - tig0031039:12967-12986 Msa1445310:intergenic 30.0%
AATTGAAGACAAGGTTGCTA+TGG - tig0031039:8547-8566 Msa0478620:intergenic 35.0%
! GCATTTGATGATTCCAAAAC+TGG + tig0031039:8639-8658 Msa1445310:CDS 35.0%
GATTCCAAAACTGGTGTAAA+AGG + tig0031039:8648-8667 Msa1445310:CDS 35.0%
TGTGTTGAAGATCTATGATG+GGG - tig0031039:8776-8795 Msa1445310:intergenic 35.0%
GATGTGTTGAAGATCTATGA+TGG - tig0031039:8778-8797 Msa1445310:intergenic 35.0%
!! TCTTGGAAGCATTCTTGATT+TGG - tig0031039:8821-8840 Msa1445310:intergenic 35.0%
GAATACCATGATTGATCACT+TGG - tig0031039:8857-8876 Msa1445310:intergenic 35.0%
! TGGTATTCCACTTCATGTTT+TGG + tig0031039:8869-8888 Msa1445310:CDS 35.0%
ATCTCATCCAAAACATGAAG+TGG - tig0031039:8879-8898 Msa1445310:intergenic 35.0%
!! GTTTTGGATGAGATGATCAA+TGG + tig0031039:8885-8904 Msa1445310:CDS 35.0%
TCTCTAATGGGAAGTTGTTT+AGG + tig0031039:8988-9007 Msa1445310:CDS 35.0%
CTCTAATGGGAAGTTGTTTA+GGG + tig0031039:8989-9008 Msa1445310:CDS 35.0%
ATTGGTATCTCTTCTGGATT+GGG - tig0031039:9068-9087 Msa1445310:intergenic 35.0%
TATTGGTATCTCTTCTGGAT+TGG - tig0031039:9069-9088 Msa1445310:intergenic 35.0%
CATACTATTGGTATCTCTTC+TGG - tig0031039:9074-9093 Msa1445310:intergenic 35.0%
AAGAGATACCAATAGTATGC+AGG + tig0031039:9075-9094 Msa1445310:CDS 35.0%
GAACATTACCTGCATACTAT+TGG - tig0031039:9086-9105 Msa1445310:intergenic 35.0%
AGAATGGAGCCTTAGTAATT+CGG + tig0031039:9176-9195 Msa1445310:intron 35.0%
AACCAAACTCCGAATTACTA+AGG - tig0031039:9188-9207 Msa1445310:intergenic 35.0%
CTAACTCATCCTTACAAAAC+CGG - tig0031039:9301-9320 Msa1445310:intergenic 35.0%
AGTTAGGCCAAATTTCAACA+TGG + tig0031039:9315-9334 Msa1445310:intron 35.0%
CGTGCGTGTAAATAAATTGT+GGG - tig0031039:9365-9384 Msa1445310:intergenic 35.0%
CCACAATTTATTTACACGCA+CGG + tig0031039:9363-9382 Msa1445310:intron 35.0%
CACAATTTATTTACACGCAC+GGG + tig0031039:9364-9383 Msa1445310:intron 35.0%
! TATTTTACTGGTGCATGGTT+TGG + tig0031039:9452-9471 Msa1445310:intron 35.0%
!!! ATAATGTTCGATTTTGGCTC+AGG - tig0031039:9737-9756 Msa1445310:intergenic 35.0%
AAAATACCATTGTGATTGGC+AGG - tig0031039:10058-10077 Msa1445310:intergenic 35.0%
! CACAATGGTATTTTCCATTG+CGG + tig0031039:10064-10083 Msa1445310:intron 35.0%
!! ACCTCTCTAGAATATCATGT+CGG - tig0031039:10214-10233 Msa1445310:intergenic 35.0%
AGGTGTCTGCTTTATATCAA+TGG + tig0031039:10230-10249 Msa1445310:intron 35.0%
TTCTTCGATCATTTCCCAAA+AGG + tig0031039:10372-10391 Msa1445310:intron 35.0%
ATGCAAATGAAGAGAGTAGA+AGG - tig0031039:10400-10419 Msa1445310:intergenic 35.0%
ATTTGCATAACATCCTTCCA+AGG + tig0031039:10412-10431 Msa1445310:intron 35.0%
! GAGGTCTTTTATAAGGAAGT+TGG - tig0031039:10501-10520 Msa1445310:intergenic 35.0%
!!! CATGCCTTTTTCAAATGATG+AGG - tig0031039:10520-10539 Msa1445310:intergenic 35.0%
CTCATCATTTGAAAAAGGCA+TGG + tig0031039:10518-10537 Msa1445310:intron 35.0%
GAATAAAGTGAGAAGGTTAG+TGG + tig0031039:10589-10608 Msa1445310:intron 35.0%
TTTCACCTTCTGATATTCTG+AGG - tig0031039:10718-10737 Msa1445310:intergenic 35.0%
TCCACAAAGAAAATTGTGCA+TGG + tig0031039:10794-10813 Msa1445310:intron 35.0%
CCACAAAGAAAATTGTGCAT+GGG + tig0031039:10795-10814 Msa1445310:intron 35.0%
TCTGAGAGATAATCATGGAA+GGG - tig0031039:10891-10910 Msa1445310:intergenic 35.0%
ATCTGAGAGATAATCATGGA+AGG - tig0031039:10892-10911 Msa1445310:intergenic 35.0%
! CTCAGATGATTGGTTGAATA+TGG + tig0031039:10905-10924 Msa1445310:intron 35.0%
TGGTTGAATATGGATATAGC+AGG + tig0031039:10915-10934 Msa1445310:intron 35.0%
GGTTGAATATGGATATAGCA+GGG + tig0031039:10916-10935 Msa1445310:intron 35.0%
GTTGAATATGGATATAGCAG+GGG + tig0031039:10917-10936 Msa1445310:intron 35.0%
GATAGGACAGTAGAAGATTA+TGG + tig0031039:10994-11013 Msa1445310:intron 35.0%
! TAGAAGATTATGGTGGCTTT+TGG + tig0031039:11004-11023 Msa1445310:intron 35.0%
!! TATGGTGGCTTTTGGTTAAA+TGG + tig0031039:11012-11031 Msa1445310:intron 35.0%
CAGCACATTCCATTTCATTA+AGG - tig0031039:11506-11525 Msa1445310:intergenic 35.0%
! TGCTGAAGCACTTTATATCA+TGG + tig0031039:11521-11540 Msa1445310:CDS 35.0%
! GCTGAAGCACTTTATATCAT+GGG + tig0031039:11522-11541 Msa1445310:CDS 35.0%
AAGTTCTTCATGAGAACCAA+TGG + tig0031039:11652-11671 Msa1445310:CDS 35.0%
AGTTCTTCATGAGAACCAAT+GGG + tig0031039:11653-11672 Msa1445310:CDS 35.0%
! GGAGCTCTTGTTGTAAATAT+TGG + tig0031039:11696-11715 Msa1445310:CDS 35.0%
AAATATTGGGGATATCCTAC+AGG + tig0031039:11710-11729 Msa1445310:CDS 35.0%
! ATAAAGCAAATGCTGTTTGG+TGG - tig0031039:11958-11977 Msa1445310:intergenic 35.0%
! ATTAGTTTAAACAGGCCATG+AGG - tig0031039:12005-12024 Msa1445310:intergenic 35.0%
TAAGCAGCTTGCAACTTATA+TGG + tig0031039:12136-12155 Msa1445310:intron 35.0%
AAACAGAGATGAACCTAGTT+TGG - tig0031039:12264-12283 Msa1445310:intergenic 35.0%
!! AGTTTTGACATTCTTTGTCG+AGG + tig0031039:12333-12352 Msa1445310:intron 35.0%
TTTAATCATAAGGGCTCAGA+AGG - tig0031039:12524-12543 Msa1445310:intergenic 35.0%
AGCCAGAAGATTAAGGAAAA+TGG - tig0031039:12560-12579 Msa1445310:intergenic 35.0%
ACATGGCAATGATAGTTTAG+TGG - tig0031039:12622-12641 Msa1445310:intergenic 35.0%
!! TCTTAAGGTGTTACTTCCAA+TGG + tig0031039:12709-12728 Msa1445310:intron 35.0%
CATTCATCAGTGTTAATCAC+CGG + tig0031039:12824-12843 Msa1445310:CDS 35.0%
ATTCATCAGTGTTAATCACC+GGG + tig0031039:12825-12844 Msa1445310:CDS 35.0%
AAGGTTGCTACAGATATTCT+AGG - tig0031039:12869-12888 Msa1445310:intergenic 35.0%
AAGAAAACCCTCCAATCTAT+AGG + tig0031039:12957-12976 Msa1445310:three_prime_UTR 35.0%
AGAAAACCCTCCAATCTATA+GGG + tig0031039:12958-12977 Msa1445310:three_prime_UTR 35.0%
GTAATATCCCTATAGATTGG+AGG - tig0031039:12968-12987 Msa1445310:intergenic 35.0%
!! TATTATGCAAAAGGCATTGC+TGG + tig0031039:13010-13029 Msa1445310:three_prime_UTR 35.0%
CATCTGCTTCACAACTTTAA+CGG - tig0031039:13052-13071 Msa1445310:intergenic 35.0%
AAAGTTGTGAAGCAGATGTA+AGG + tig0031039:13054-13073 Msa1445310:three_prime_UTR 35.0%
!! GTGAATGGATTGTAACAGAG+TGG - tig0031039:8525-8544 Msa0478620:intergenic 40.0%
TATCCACAGCTCCAAAACTA+TGG + tig0031039:8572-8591 Msa1445310:exon 40.0%
! TTGAAGATCTATGATGGGGA+TGG - tig0031039:8772-8791 Msa1445310:intergenic 40.0%
TCAAGAATGCTTCCAAGAAC+TGG + tig0031039:8823-8842 Msa1445310:CDS 40.0%
CAAGAATGCTTCCAAGAACT+GGG + tig0031039:8824-8843 Msa1445310:CDS 40.0%
AAGAATGCTTCCAAGAACTG+GGG + tig0031039:8825-8844 Msa1445310:CDS 40.0%
TTGGAAAAATCCCCAGTTCT+TGG - tig0031039:8838-8857 Msa1445310:intergenic 40.0%
AGCCTTAGTAATTCGGAGTT+TGG + tig0031039:9183-9202 Msa1445310:intron 40.0%
AAGTCTTGCATCGGATAGAT+AGG + tig0031039:9228-9247 Msa1445310:intron 40.0%
CATCGGATAGATAGGACTAT+TGG + tig0031039:9236-9255 Msa1445310:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + tig0031039:9299-9318 Msa1445310:intron 40.0%
CTGGGTACCATGTTGAAATT+TGG - tig0031039:9325-9344 Msa1445310:intergenic 40.0%
CAAATTTCAACATGGTACCC+AGG + tig0031039:9323-9342 Msa1445310:intron 40.0%
GCGTGTAAATAAATTGTGGG+TGG - tig0031039:9362-9381 Msa1445310:intergenic 40.0%
CCGTGCGTGTAAATAAATTG+TGG - tig0031039:9366-9385 Msa1445310:intergenic 40.0%
GGAAACCAAAGCAAAAGAAC+CGG + tig0031039:9483-9502 Msa1445310:intron 40.0%
!!! TTGTACCGGTTCTTTTGCTT+TGG - tig0031039:9491-9510 Msa1445310:intergenic 40.0%
AAAGAACCGGTACAACAACT+AGG + tig0031039:9496-9515 Msa1445310:intron 40.0%
GGACTAACTTCAACTGCTAA+TGG + tig0031039:9521-9540 Msa1445310:intron 40.0%
!!! TTCGATTTTGGCTCAGGTTA+TGG - tig0031039:9731-9750 Msa1445310:intergenic 40.0%
ATTGCTTAAATAGTGCCCCA+GGG + tig0031039:9897-9916 Msa1445310:intron 40.0%
TATTGTTAACAAGTGCCCCT+GGG - tig0031039:9916-9935 Msa1445310:intergenic 40.0%
TCAATTATCCGTCTCAGTTC+AGG - tig0031039:9992-10011 Msa1445310:intergenic 40.0%
CGAACTGAACTAACTCAGTT+TGG - tig0031039:10028-10047 Msa1445310:intergenic 40.0%
CGGATACTGACATTTATCAC+CGG - tig0031039:10138-10157 Msa1445310:intergenic 40.0%
AAACTGTGTCTAAGCAGTGT+CGG + tig0031039:10168-10187 Msa1445310:intron 40.0%
CACTTCGAGGACCAAAATAA+TGG - tig0031039:10261-10280 Msa1445310:intergenic 40.0%
AGTGTAACTAGCTGTCACAT+TGG + tig0031039:10277-10296 Msa1445310:intron 40.0%
ATGAAGAATAGAAAGGGCCT+TGG - tig0031039:10432-10451 Msa1445310:intergenic 40.0%
CATCTAACCTTGCAAAGTCT+TGG - tig0031039:10621-10640 Msa1445310:intergenic 40.0%
GACTTTGCAAGGTTAGATGA+CGG + tig0031039:10622-10641 Msa1445310:intron 40.0%
!! GTTGAAGCAAGGCTTGTTAT+TGG - tig0031039:10682-10701 Msa1445310:intergenic 40.0%
! CTTGTAAGTGAGTTGAAGCA+AGG - tig0031039:10693-10712 Msa1445310:intergenic 40.0%
AAGTGCCTCAGAATATCAGA+AGG + tig0031039:10710-10729 Msa1445310:intron 40.0%
! CCCATGCACAATTTTCTTTG+TGG - tig0031039:10798-10817 Msa1445310:intergenic 40.0%
! GAATGAGTTGAGAGAGATTG+TGG + tig0031039:10972-10991 Msa1445310:intron 40.0%
AGTTGAGAGAGATTGTGGAT+AGG + tig0031039:10977-10996 Msa1445310:intron 40.0%
AGGACAGTAGAAGATTATGG+TGG + tig0031039:10997-11016 Msa1445310:intron 40.0%
CAAGATCTTGAATCGCACAT+GGG + tig0031039:11039-11058 Msa1445310:intron 40.0%
TCATGAAGCAACCTCAGTTT+GGG + tig0031039:11104-11123 Msa1445310:intron 40.0%
GTTTCGTAACTAGTGAAGCT+CGG + tig0031039:11248-11267 Msa1445310:intron 40.0%
GGAAGAGTGGAGGATTTAAT+TGG + tig0031039:11269-11288 Msa1445310:intron 40.0%
TGACATCGAGTTACACTTTC+AGG + tig0031039:11323-11342 Msa1445310:intron 40.0%
GAGTTATTGTCAGAAGCTCT+TGG + tig0031039:11465-11484 Msa1445310:CDS 40.0%
TCCCATAGTTAACTCAGGTT+CGG - tig0031039:11568-11587 Msa1445310:intergenic 40.0%
CCAATTCCCATAGTTAACTC+AGG - tig0031039:11573-11592 Msa1445310:intergenic 40.0%
CCTGAGTTAACTATGGGAAT+TGG + tig0031039:11570-11589 Msa1445310:CDS 40.0%
ATCCTACAGGTAACCATGAT+CGG + tig0031039:11723-11742 Msa1445310:intron 40.0%
AAGAAAGACAGGTGACAGTA+TGG + tig0031039:12310-12329 Msa1445310:intron 40.0%
ACAGATCAGCCAGAAGATTA+AGG - tig0031039:12567-12586 Msa1445310:intergenic 40.0%
ACCTATATTCCTTGACAACC+CGG - tig0031039:12846-12865 Msa1445310:intergenic 40.0%
GACAAGGTTGCTATGGTGAA+TGG - tig0031039:8540-8559 Msa0478620:intergenic 45.0%
!!! ATGCCATAGTTTTGGAGCTG+TGG - tig0031039:8578-8597 Msa1445310:intergenic 45.0%
GTGAAGTTGGACTCATCAGT+AGG - tig0031039:8747-8766 Msa1445310:intergenic 45.0%
! AAGATCTATGATGGGGATGG+TGG - tig0031039:8769-8788 Msa1445310:intergenic 45.0%
TGGGAAGTTGTTTAGGGACA+TGG + tig0031039:8995-9014 Msa1445310:CDS 45.0%
TTAGGGACATGGCTGCTAAT+TGG + tig0031039:9006-9025 Msa1445310:CDS 45.0%
! CTTCTGGATTGGGAAGATCA+GGG - tig0031039:9058-9077 Msa1445310:intergenic 45.0%
! TCTTCTGGATTGGGAAGATC+AGG - tig0031039:9059-9078 Msa1445310:intergenic 45.0%
! CGGAGTTTGGTTGAGAGTAT+TGG + tig0031039:9196-9215 Msa1445310:intron 45.0%
CCTTACAAAACCGGCTAGTA+AGG - tig0031039:9292-9311 Msa1445310:intergenic 45.0%
!! CCTTACTAGCCGGTTTTGTA+AGG + tig0031039:9289-9308 Msa1445310:intron 45.0%
AACCGGTACAACAACTAGGT+AGG + tig0031039:9500-9519 Msa1445310:intron 45.0%
GTCCTACCTAGTTGTTGTAC+CGG - tig0031039:9505-9524 Msa1445310:intergenic 45.0%
! GCTAATGGATCATCCTGAAC+TGG + tig0031039:9536-9555 Msa1445310:intron 45.0%
AAATGTTAACGAGTGCCCCT+GGG + tig0031039:9768-9787 Msa1445310:intron 45.0%
GATTGCTTAAATAGTGCCCC+AGG + tig0031039:9896-9915 Msa1445310:intron 45.0%
TTGCTTAAATAGTGCCCCAG+GGG + tig0031039:9898-9917 Msa1445310:intron 45.0%
ATTGTTAACAAGTGCCCCTG+GGG - tig0031039:9915-9934 Msa1445310:intergenic 45.0%
GTATTGTTAACAAGTGCCCC+TGG - tig0031039:9917-9936 Msa1445310:intergenic 45.0%
ACTGACATTTATCACCGGAC+AGG - tig0031039:10133-10152 Msa1445310:intergenic 45.0%
GACACAGTTTAGACACTGCT+CGG - tig0031039:10158-10177 Msa1445310:intergenic 45.0%
!! TGTCTAAGCAGTGTCGGTAT+CGG + tig0031039:10174-10193 Msa1445310:intron 45.0%
! GCCGACATGATATTCTAGAG+AGG + tig0031039:10210-10229 Msa1445310:intron 45.0%
TGACAGCTAGTTACACTTCG+AGG - tig0031039:10274-10293 Msa1445310:intergenic 45.0%
TGGTCTATGTGATTCTGACG+TGG + tig0031039:10297-10316 Msa1445310:intron 45.0%
! GAGAGTAGAAGGAGCCTTTT+GGG - tig0031039:10389-10408 Msa1445310:intergenic 45.0%
! AGAGAGTAGAAGGAGCCTTT+TGG - tig0031039:10390-10409 Msa1445310:intergenic 45.0%
AGAATAGAAAGGGCCTTGGA+AGG - tig0031039:10428-10447 Msa1445310:intergenic 45.0%
GGCATGGAAAGTTTCTGTGT+TGG + tig0031039:10534-10553 Msa1445310:intron 45.0%
! TGGAAAGTTTCTGTGTTGGC+TGG + tig0031039:10538-10557 Msa1445310:intron 45.0%
GCTCAATCCAAGACTTTGCA+AGG + tig0031039:10611-10630 Msa1445310:intron 45.0%
CGGCTAAAGATAGTGCAACT+TGG + tig0031039:10642-10661 Msa1445310:intron 45.0%
!! GTGGCTTTTGGTTAAATGGC+AGG + tig0031039:11016-11035 Msa1445310:intron 45.0%
GCAAGATCTTGAATCGCACA+TGG + tig0031039:11038-11057 Msa1445310:intron 45.0%
ACTGAGGTTGCTTCATGACT+TGG - tig0031039:11102-11121 Msa1445310:intergenic 45.0%
GTCATGAAGCAACCTCAGTT+TGG + tig0031039:11103-11122 Msa1445310:intron 45.0%
ATAGGTCAAGTCCCAAACTG+AGG - tig0031039:11118-11137 Msa1445310:intergenic 45.0%
CCATAGTTAACTCAGGTTCG+GGG - tig0031039:11566-11585 Msa1445310:intergenic 45.0%
CCCATAGTTAACTCAGGTTC+GGG - tig0031039:11567-11586 Msa1445310:intergenic 45.0%
CCCGAACCTGAGTTAACTAT+GGG + tig0031039:11564-11583 Msa1445310:CDS 45.0%
AACCGATCATGGTTACCTGT+AGG - tig0031039:11728-11747 Msa1445310:intergenic 45.0%
!! GTTTGGTGGTGAAACACTGA+AGG - tig0031039:11944-11963 Msa1445310:intergenic 45.0%
TGTAGATGCAAAAGGGTGAC+TGG + tig0031039:11977-11996 Msa1445310:intron 45.0%
TGTTAATCACCGGGTTGTCA+AGG + tig0031039:12834-12853 Msa1445310:CDS 45.0%
ACCGGGTTGTCAAGGAATAT+AGG + tig0031039:12842-12861 Msa1445310:CDS 45.0%
GGACATGGCTGCTAATTGGA+GGG + tig0031039:9010-9029 Msa1445310:CDS 50.0%
GTGTTAACCCTCCGGTTCTT+AGG + tig0031039:9153-9172 Msa1445310:intron 50.0%
CCATTCTCCTAAGAACCGGA+GGG - tig0031039:9163-9182 Msa1445310:intergenic 50.0%
TCCATTCTCCTAAGAACCGG+AGG - tig0031039:9164-9183 Msa1445310:intergenic 50.0%
GGCTCCATTCTCCTAAGAAC+CGG - tig0031039:9167-9186 Msa1445310:intergenic 50.0%
ACACTCCTCACCTTACTAGC+CGG + tig0031039:9279-9298 Msa1445310:intron 50.0%
CAAAACCGGCTAGTAAGGTG+AGG - tig0031039:9287-9306 Msa1445310:intergenic 50.0%
TGGTACCCAGGCCTATTGTT+CGG + tig0031039:9335-9354 Msa1445310:intron 50.0%
!! ACTGGTGCATGGTTTGGTTC+AGG + tig0031039:9458-9477 Msa1445310:intron 50.0%
!! GTGCATGGTTTGGTTCAGGA+AGG + tig0031039:9462-9481 Msa1445310:intron 50.0%
GAAATGTTAACGAGTGCCCC+TGG + tig0031039:9767-9786 Msa1445310:intron 50.0%
AATGTTAACGAGTGCCCCTG+GGG + tig0031039:9769-9788 Msa1445310:intron 50.0%
!! ATCCCTTAAAGAGTGCCCCA+GGG - tig0031039:9787-9806 Msa1445310:intergenic 50.0%
!! AATCCCTTAAAGAGTGCCCC+AGG - tig0031039:9788-9807 Msa1445310:intergenic 50.0%
! CGTCTCAGTTCAGGTCTTGT+CGG - tig0031039:9983-10002 Msa1445310:intergenic 50.0%
CGACAAGACCTGAACTGAGA+CGG + tig0031039:9981-10000 Msa1445310:intron 50.0%
GAACTGCCTGCCAATCACAA+TGG + tig0031039:10049-10068 Msa1445310:intron 50.0%
TCTACCTAGAGGATCCTGTC+CGG + tig0031039:10116-10135 Msa1445310:intron 50.0%
TCTTGAATCGCACATGGGAG+TGG + tig0031039:11044-11063 Msa1445310:intron 50.0%
!! GGTTGCTTCATGACTTGGTG+TGG - tig0031039:11097-11116 Msa1445310:intergenic 50.0%
ACTAGTGAAGCTCGGAAGAG+TGG + tig0031039:11256-11275 Msa1445310:intron 50.0%
CCCCGAACCTGAGTTAACTA+TGG + tig0031039:11563-11582 Msa1445310:CDS 50.0%
CTGGTGGAACATTGACCCAT+TGG - tig0031039:11671-11690 Msa1445310:intergenic 50.0%
GTCAATGTTCCACCAGTGCA+CGG + tig0031039:11675-11694 Msa1445310:CDS 50.0%
! GATGGGGATGGTGGTGAAGT+TGG - tig0031039:8760-8779 Msa1445310:intergenic 55.0%
GGGACATGGCTGCTAATTGG+AGG + tig0031039:9009-9028 Msa1445310:CDS 55.0%
CCCTCCGGTTCTTAGGAGAA+TGG + tig0031039:9160-9179 Msa1445310:intron 55.0%
GGTACCCAGGCCTATTGTTC+GGG + tig0031039:9336-9355 Msa1445310:intron 55.0%
TTGTGGGTGGCCCGAACAAT+AGG - tig0031039:9349-9368 Msa1445310:intergenic 55.0%
!! TCCCTTAAAGAGTGCCCCAG+GGG - tig0031039:9786-9805 Msa1445310:intergenic 55.0%
! CAGTTCAGGTCTTGTCGGTG+CGG - tig0031039:9978-9997 Msa1445310:intergenic 55.0%
ATCACCGGACAGGATCCTCT+AGG - tig0031039:10123-10142 Msa1445310:intergenic 55.0%
! CTTGGTGTGGTCTCTTGTGC+TGG - tig0031039:11084-11103 Msa1445310:intergenic 55.0%
AGTGAAGCTCGGAAGAGTGG+AGG + tig0031039:11259-11278 Msa1445310:intron 55.0%
!! AACTCAGGTTCGGGGCATTG+TGG - tig0031039:11558-11577 Msa1445310:intergenic 55.0%
ACAACAAGAGCTCCGTGCAC+TGG - tig0031039:11690-11709 Msa1445310:intergenic 55.0%
AAAGGGTGACTGGAGCCTCA+TGG + tig0031039:11987-12006 Msa1445310:intron 55.0%
GTGGCCCGAACAATAGGCCT+GGG - tig0031039:9343-9362 Msa1445310:intergenic 60.0%
! TGCCCCTGGGGCACTCTTTA+AGG + tig0031039:9781-9800 Msa1445310:intron 60.0%
! GCCCCTGGGGCACTCTTTAA+GGG + tig0031039:9782-9801 Msa1445310:intron 60.0%
ACAAGAGCTCCGTGCACTGG+TGG - tig0031039:11687-11706 Msa1445310:intergenic 60.0%
GGTGGCCCGAACAATAGGCC+TGG - tig0031039:9344-9363 Msa1445310:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0031039 gene 8425 13289 8425 ID=Msa1445310;Name=Msa1445310
tig0031039 mRNA 8425 13289 8425 ID=Msa1445310-mRNA-1;Parent=Msa1445310;Name=Msa1445310-mRNA-1;_AED=0.31;_eAED=0.31;_QI=166|1|1|1|1|1|3|419|296
tig0031039 exon 8425 9096 8425 ID=Msa1445310-mRNA-1:exon:14926;Parent=Msa1445310-mRNA-1
tig0031039 exon 11410 11731 11410 ID=Msa1445310-mRNA-1:exon:14927;Parent=Msa1445310-mRNA-1
tig0031039 exon 12808 13289 12808 ID=Msa1445310-mRNA-1:exon:14928;Parent=Msa1445310-mRNA-1
tig0031039 five_prime_UTR 8425 8590 8425 ID=Msa1445310-mRNA-1:five_prime_utr;Parent=Msa1445310-mRNA-1
tig0031039 CDS 8591 9096 8591 ID=Msa1445310-mRNA-1:cds;Parent=Msa1445310-mRNA-1
tig0031039 CDS 11410 11731 11410 ID=Msa1445310-mRNA-1:cds;Parent=Msa1445310-mRNA-1
tig0031039 CDS 12808 12870 12808 ID=Msa1445310-mRNA-1:cds;Parent=Msa1445310-mRNA-1
tig0031039 three_prime_UTR 12871 13289 12871 ID=Msa1445310-mRNA-1:three_prime_utr;Parent=Msa1445310-mRNA-1
Gene Sequence

>Msa1445310

ATGGCATCATTAGAATCATTTAGTGACTTAAAAAAAGCACAAGTTCAAGCATTTGATGATTCCAAAACTGGTGTAAAAGGTATACTAGATTCTGGCATAACAAAGATACCTTCCATTTTTCATGTTAACTTGGAAAAATCTACTCAAAATTCACCTACTGATGAGTCCAACTTCACCACCATCCCCATCATAGATCTTCAACACATCAAAAGAGTTGAGCTAGTTGACCAAATCAAGAATGCTTCCAAGAACTGGGGATTTTTCCAAGTGATCAATCATGGTATTCCACTTCATGTTTTGGATGAGATGATCAATGGAATTTGTAGGTTTCATGAACAAGATGCTGAAGCTAAGAAACCCTTTTACTCAAGAGATAAAGATAAGAAAGTTAGGTATTTCTCTAATGGGAAGTTGTTTAGGGACATGGCTGCTAATTGGAGGGATACAATTGCTTTTGCTGCAAACCCTGATCTTCCCAATCCAGAAGAGATACCAATAGTATGCAGAGATATTGTGGCTGAATATTCAAAACAAGTAAAAGCATTGGGTGTTGCGATCTTTGAGTTATTGTCAGAAGCTCTTGGCCTCAATCTTTCTTACCTTAATGAAATGGAATGTGCTGAAGCACTTTATATCATGGGACAATACTATCCACAATGCCCCGAACCTGAGTTAACTATGGGAATTGGAAAACACACTGATTGTGCCTTCATGACAATACTTCTTCAAAATCAAATAGGTGGTCTTCAAGTTCTTCATGAGAACCAATGGGTCAATGTTCCACCAGTGCACGGAGCTCTTGTTGTAAATATTGGGGATATCCTACAGCTAATGACGAATGACACATTCATCAGTGTTAATCACCGGGTTGTCAAGGAATATAGGTCCTAG
Protein sequence

>Msa1445310

MASLESFSDLKKAQVQAFDDSKTGVKGILDSGITKIPSIFHVNLEKSTQNSPTDESNFTTIPIIDLQHIKRVELVDQIKNASKNWGFFQVINHGIPLHVLDEMINGICRFHEQDAEAKKPFYSRDKDKKVRYFSNGKLFRDMAANWRDTIAFAANPDLPNPEEIPIVCRDIVAEYSKQVKALGVAIFELLSEALGLNLSYLNEMECAEALYIMGQYYPQCPEPELTMGIGKHTDCAFMTILLQNQIGGLQVLHENQWVNVPPVHGALVVNIGDILQLMTNDTFISVNHRVVKEYRS*