AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1424990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1424990 MtrunA17_Chr4g0067291 92.077 366 21 2 1 366 1 358 0.0 670
Msa1424990 MtrunA17_Chr2g0296001 49.451 364 145 12 22 366 10 353 5.98e-78 243
Msa1424990 MtrunA17_Chr5g0421601 82.895 76 11 1 291 366 43 116 3.39e-39 137
Msa1424990 MtrunA17_Chr7g0269081 60.870 69 27 0 69 137 17 85 4.26e-23 98.2
Msa1424990 MtrunA17_Chr2g0287751 64.179 67 24 0 71 137 7 73 1.09e-21 96.3
Msa1424990 MtrunA17_Chr0c22g0493881 64.179 67 24 0 71 137 7 73 1.75e-21 94.4
Msa1424990 MtrunA17_Chr4g0065651 64.179 67 24 0 71 137 7 73 2.07e-21 95.5
Msa1424990 MtrunA17_Chr4g0065621 64.179 67 24 0 71 137 7 73 9.08e-21 92.4
Msa1424990 MtrunA17_Chr7g0272571 49.057 106 54 0 78 183 37 142 3.84e-20 90.5
Msa1424990 MtrunA17_Chr1g0208301 56.716 67 29 0 71 137 10 76 4.92e-19 87.4
Msa1424990 MtrunA17_Chr1g0192131 58.904 73 29 1 69 140 10 82 1.67e-18 86.3
Msa1424990 MtrunA17_Chr3g0111541 50.685 73 36 0 69 141 7 79 1.08e-17 80.9
Msa1424990 MtrunA17_Chr1g0191671 53.731 67 31 0 71 137 7 73 2.46e-17 83.6
Msa1424990 MtrunA17_Chr2g0287741 59.016 61 25 0 77 137 18 78 2.52e-13 71.2
Msa1424990 MtrunA17_Chr3g0124411 45.455 66 36 0 74 139 30 95 6.97e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1424990 AT5G27690.1 48.544 103 51 1 63 165 19 119 1.08e-27 112
Msa1424990 AT3G06130.2 62.687 67 25 0 71 137 7 73 1.44e-21 94.7
Msa1424990 AT3G06130.1 62.687 67 25 0 71 137 7 73 2.21e-21 95.5
Msa1424990 AT1G56210.1 58.228 79 32 1 73 151 39 116 1.65e-20 92.0
Msa1424990 AT5G19090.2 61.194 67 26 0 71 137 7 73 1.70e-20 92.8
Msa1424990 AT5G19090.3 61.194 67 26 0 71 137 7 73 1.70e-20 92.8
Msa1424990 AT5G19090.5 61.194 67 26 0 71 137 7 73 2.77e-20 92.8
Msa1424990 AT5G19090.4 61.194 67 26 0 71 137 7 73 2.77e-20 92.8
Msa1424990 AT5G19090.1 61.194 67 26 0 71 137 7 73 2.77e-20 92.8
Msa1424990 AT3G05220.1 45.455 99 41 1 71 156 7 105 8.93e-19 88.2
Msa1424990 AT1G23000.1 51.136 88 39 1 71 154 10 97 3.97e-18 85.1
Msa1424990 AT1G23000.2 51.136 88 39 1 71 154 70 157 6.56e-18 85.1
Msa1424990 AT5G37860.1 51.429 70 32 1 69 138 7 74 4.36e-17 80.5

Find 107 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAAGGAGCAGTGTGTTAT+TGG 0.241119 tig0025808:+55302 Msa1424990:CDS
AGTCTCAAGAGCAGCATTTC+CGG 0.252114 tig0025808:-56124 None:intergenic
TCCCTACCACTTCTTTCTAA+TGG 0.297572 tig0025808:+55440 Msa1424990:CDS
CTTATTGTTCTTAGCTTTGT+TGG 0.303501 tig0025808:-56223 None:intergenic
CAAAGTGACGGAGGAGATTC+TGG 0.303987 tig0025808:+56459 Msa1424990:CDS
AAAGGAGGATAACATGTTTC+TGG 0.326816 tig0025808:-56663 None:intergenic
CTGTTACTTTATTCTGTTGT+GGG 0.334604 tig0025808:-56098 None:intergenic
GAAGTCTCCGGCTGGTGGTA+AGG 0.343097 tig0025808:+56410 Msa1424990:CDS
CTCACAACCTTTGAAGTATC+AGG 0.350972 tig0025808:+55470 Msa1424990:CDS
GTTGGAATCCTTTACTTTCC+CGG 0.364425 tig0025808:-56205 None:intergenic
TAGGGAGAGTGAGAGGGAAT+TGG 0.369042 tig0025808:-55423 None:intergenic
TACTACTTTGGTACCCATCT+TGG 0.374787 tig0025808:+55340 Msa1424990:CDS
AAAGTTCTTCAGAGCATTGA+TGG 0.380495 tig0025808:+55633 Msa1424990:CDS
TTTATGTCATTGGTTTAGTA+GGG 0.390368 tig0025808:+56980 Msa1424990:three_prime_UTR
AAGTCTCCGGCTGGTGGTAA+GGG 0.397507 tig0025808:+56411 Msa1424990:CDS
AGAAACATGTTATCCTCCTT+TGG 0.402980 tig0025808:+56665 Msa1424990:CDS
TTCAGTGATGAAAATGCAAA+TGG 0.414371 tig0025808:+56840 Msa1424990:CDS
ACTCAGAGTGGTGGTGGAAC+TGG 0.415991 tig0025808:+56501 Msa1424990:CDS
GGTGTAGATTGAAACTGATA+AGG 0.423427 tig0025808:-56798 None:intergenic
GGTGGAACTGGAACTGGTAC+TGG 0.429060 tig0025808:+56513 Msa1424990:CDS
ATAAGGAAACTTGCCAAAGC+TGG 0.429968 tig0025808:+56150 Msa1424990:CDS
ACTTTCCCGGGAAGATTCTC+CGG 0.432811 tig0025808:-56192 None:intergenic
ATTGTCACATTATACTACTT+TGG 0.440513 tig0025808:+55328 Msa1424990:CDS
CTTCTCCGGTGAGCCTGCAT+TGG 0.441368 tig0025808:-56391 None:intergenic
GTTCAGTATTTGCAGAAGAA+TGG 0.444257 tig0025808:-56287 None:intergenic
TCTTTGCCAGAGTTGAGGTT+GGG 0.446946 tig0025808:-56309 None:intergenic
AGAAGGAGCAGTGTGTTATT+GGG 0.456675 tig0025808:+55303 Msa1424990:CDS
GTCTTTGCCAGAGTTGAGGT+TGG 0.465562 tig0025808:-56310 None:intergenic
ACTGTTACTTTATTCTGTTG+TGG 0.465847 tig0025808:-56099 None:intergenic
TCCGGCTGGTGGTAAGGGGC+AGG 0.471765 tig0025808:+56416 Msa1424990:CDS
CCACAACCTGACCTGGACTC+TGG 0.474692 tig0025808:-56593 None:intergenic
GAAGTGGTAGGGAGAGTGAG+AGG 0.475907 tig0025808:-55430 None:intergenic
CTTGTTACCTGATACTTCAA+AGG 0.480475 tig0025808:-55477 None:intergenic
CATTGTCTTTGCCAGAGTTG+AGG 0.481500 tig0025808:-56314 None:intergenic
CCAGAGTCCAGGTCAGGTTG+TGG 0.484643 tig0025808:+56593 Msa1424990:CDS
ACTTGCCCCACAACCTGACC+TGG 0.491399 tig0025808:-56600 None:intergenic
CAGAGTCCAGGTCAGGTTGT+GGG 0.494388 tig0025808:+56594 Msa1424990:CDS
TCATCACTGAAGAACTCAAA+GGG 0.495787 tig0025808:-56828 None:intergenic
TTGGAATCCTTTACTTTCCC+GGG 0.497963 tig0025808:-56204 None:intergenic
ACAAAGGAAACAAGCCAAGA+TGG 0.500180 tig0025808:-55354 None:intergenic
TTATGTCCCATGGGAACAAT+GGG 0.501053 tig0025808:+56717 Msa1424990:CDS
GAGTGATATTGAAGGGGCAG+AGG 0.503376 tig0025808:+55272 Msa1424990:CDS
CCACCAGCCGGAGACTTCTC+CGG 0.503765 tig0025808:-56405 None:intergenic
AGTGGTGGTGGAACTGGAAC+TGG 0.504029 tig0025808:+56507 Msa1424990:CDS
CTGCTCTTGAGACTCTGATA+AGG 0.510884 tig0025808:+56133 Msa1424990:CDS
ATTATGTCCCATGGGAACAA+TGG 0.510951 tig0025808:+56716 Msa1424990:CDS
TCCTGCCCCTTACCACCAGC+CGG 0.521714 tig0025808:-56417 None:intergenic
ATCAAAATGAAAGTGAGAAG+AGG 0.524463 tig0025808:-55391 None:intergenic
AATGAATGAGTGATATTGAA+GGG 0.533057 tig0025808:+55265 None:intergenic
AATTCTGTTCCAGTGTGTGC+AGG 0.535092 tig0025808:-56570 None:intergenic
ACTGAACCCAACCTCAACTC+TGG 0.537061 tig0025808:+56303 Msa1424990:CDS
CAGAATAAAGTAACAGTCAC+CGG 0.539639 tig0025808:+56105 Msa1424990:CDS
GGAACTGGTACTGGAAGCAA+TGG 0.540520 tig0025808:+56522 Msa1424990:CDS
AGAATTCCAGAGTCCAGGTC+AGG 0.540529 tig0025808:+56587 Msa1424990:CDS
AAGTGGTAGGGAGAGTGAGA+GGG 0.543566 tig0025808:-55429 None:intergenic
GTGTAGATTGAAACTGATAA+GGG 0.544319 tig0025808:-56797 None:intergenic
TCCATTAGAAAGAAGTGGTA+GGG 0.544788 tig0025808:-55441 None:intergenic
AAGAACTCAAAGGGAATCAA+AGG 0.545599 tig0025808:-56819 None:intergenic
CCTGCACACATGTAGGGTAA+TGG 0.545645 tig0025808:-56762 None:intergenic
GGGTTGAATTCAGCATCTAC+TGG 0.546569 tig0025808:+56543 Msa1424990:CDS
CCATTACCCTACATGTGTGC+AGG 0.547946 tig0025808:+56762 Msa1424990:CDS
TGTACGATTGCTGACGTGTA+GGG 0.549805 tig0025808:-56632 None:intergenic
GGAACAGAATTCCAGAGTCC+AGG 0.554436 tig0025808:+56582 Msa1424990:CDS
GAATCTTCCCGGGAAAGTAA+AGG 0.555618 tig0025808:+56197 Msa1424990:CDS
CTCAACTCTGGCAAAGACAA+TGG 0.558672 tig0025808:+56315 Msa1424990:CDS
TTATGTCATTGGTTTAGTAG+GGG 0.559599 tig0025808:+56981 Msa1424990:three_prime_UTR
AAGAAAACTCAGAGTGGTGG+TGG 0.559828 tig0025808:+56495 Msa1424990:CDS
TCACCGGAGAAGTCTCCGGC+TGG 0.562059 tig0025808:+56402 Msa1424990:CDS
ATCAAAGCCTGCACACATGT+AGG 0.562123 tig0025808:-56769 None:intergenic
GAATGAATGAGTGATATTGA+AGG 0.565677 tig0025808:+55264 None:intergenic
AGGCTCACCGGAGAAGTCTC+CGG 0.565901 tig0025808:+56398 Msa1424990:CDS
CAAAGGAAACAAGCCAAGAT+GGG 0.566526 tig0025808:-55353 None:intergenic
GGGCAGAGGAAAGCAGCAGA+AGG 0.570675 tig0025808:+55286 Msa1424990:CDS
TTCATCACTGAAGAACTCAA+AGG 0.571401 tig0025808:-56829 None:intergenic
AAAGTTTCTATCCACTGTGA+AGG 0.572186 tig0025808:+55591 Msa1424990:CDS
AGGACAACCCATTGTTCCCA+TGG 0.573869 tig0025808:-56724 None:intergenic
ACTGGTGCACCTGCACACAC+TGG 0.576692 tig0025808:+56561 Msa1424990:CDS
AGAGTCCAGGTCAGGTTGTG+GGG 0.576942 tig0025808:+56595 Msa1424990:CDS
AAGATTCTCCGGCAAAACCT+CGG 0.580702 tig0025808:-56181 None:intergenic
ATGTACGATTGCTGACGTGT+AGG 0.582334 tig0025808:-56633 None:intergenic
AGTCTCCGGCTGGTGGTAAG+GGG 0.587065 tig0025808:+56412 Msa1424990:CDS
AATGGTGGAACATAGTAAGA+AGG 0.587419 tig0025808:-56744 None:intergenic
TCAAAGCCTGCACACATGTA+GGG 0.588146 tig0025808:-56768 None:intergenic
GAAGATCTTAGTCTTAACAC+TGG 0.588636 tig0025808:+57019 Msa1424990:three_prime_UTR
CCGGAGAAGTCTCCGGCTGG+TGG 0.597364 tig0025808:+56405 Msa1424990:CDS
TAGCATCCATTAGAAAGAAG+TGG 0.601642 tig0025808:-55446 None:intergenic
GAAAATGCTGAAAAGAGTAA+CGG 0.604011 tig0025808:+56342 Msa1424990:CDS
GCATACTGTAACTGTACCAA+AGG 0.606232 tig0025808:-56681 None:intergenic
ATCCATTAGAAAGAAGTGGT+AGG 0.606650 tig0025808:-55442 None:intergenic
TACTGTAACTGTACCAAAGG+AGG 0.608858 tig0025808:-56678 None:intergenic
GGAAAATGCCAAGAAAACAA+AGG 0.610475 tig0025808:-55370 None:intergenic
TACAACAGATTATGTCCCAT+GGG 0.611088 tig0025808:+56708 Msa1424990:CDS
CTGATACTTCAAAGGTTGTG+AGG 0.611217 tig0025808:-55469 None:intergenic
TCAGTGATGAAAATGCAAAT+GGG 0.618236 tig0025808:+56841 Msa1424990:CDS
AACAAGAGTGGTCAAAGTGA+CGG 0.620183 tig0025808:+56447 Msa1424990:CDS
TCCACTGTGAAGGTTGCAGA+AGG 0.622366 tig0025808:+55601 Msa1424990:CDS
TTACAACAGATTATGTCCCA+TGG 0.627593 tig0025808:+56707 Msa1424990:CDS
GCACACATGTAGGGTAATGG+TGG 0.635142 tig0025808:-56759 None:intergenic
ATGAATGAGTGATATTGAAG+GGG 0.641944 tig0025808:+55266 None:intergenic
GGACAACCCATTGTTCCCAT+GGG 0.650796 tig0025808:-56723 None:intergenic
GAACTGGTACTGGAAGCAAT+GGG 0.662909 tig0025808:+56523 Msa1424990:CDS
ATGAAGAAAACTCAGAGTGG+TGG 0.667457 tig0025808:+56492 Msa1424990:CDS
CAAAGCTGGAAAACACGCCG+AGG 0.682819 tig0025808:+56164 Msa1424990:CDS
CAGGAAACAAAGAACAAGAG+TGG 0.686430 tig0025808:+56435 Msa1424990:CDS
AAGAGTGGTCAAAGTGACGG+AGG 0.693962 tig0025808:+56450 Msa1424990:CDS
TCCTTCTGCAACCTTCACAG+TGG 0.695716 tig0025808:-55602 None:intergenic
AAGATGAAGAAAACTCAGAG+TGG 0.726316 tig0025808:+56489 Msa1424990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTATAAACTAAACT+TGG + tig0025808:55543-55562 Msa1424990:intron 10.0%
!!! TTTATTTTATAAACTAAACT+TGG + tig0025808:55543-55562 Msa1424990:intron 10.0%
!!! AAAGAAAGATTTTGACAATA+GGG - tig0025808:55526-55545 None:intergenic 20.0%
!!! TAAAGAAAGATTTTGACAAT+AGG - tig0025808:55527-55546 None:intergenic 20.0%
!!! GATTTTGTTTGTTCTATTAT+AGG + tig0025808:56902-56921 Msa1424990:three_prime_UTR 20.0%
!!! TAGTATATGTTTTATGTCAT+TGG + tig0025808:56970-56989 Msa1424990:three_prime_UTR 20.0%
!!! GCTTTAGCTTATTTTAATTT+TGG + tig0025808:57060-57079 Msa1424990:three_prime_UTR 20.0%
!!! AAAGAAAGATTTTGACAATA+GGG - tig0025808:55526-55545 None:intergenic 20.0%
!!! TAAAGAAAGATTTTGACAAT+AGG - tig0025808:55527-55546 None:intergenic 20.0%
!!! GATTTTGTTTGTTCTATTAT+AGG + tig0025808:56902-56921 Msa1424990:three_prime_UTR 20.0%
!!! TAGTATATGTTTTATGTCAT+TGG + tig0025808:56970-56989 Msa1424990:three_prime_UTR 20.0%
! ATTGTCACATTATACTACTT+TGG + tig0025808:55328-55347 Msa1424990:CDS 25.0%
!!! AAGAAAGATTTTGACAATAG+GGG - tig0025808:55525-55544 None:intergenic 25.0%
! GTTGAAAACTTAAGTTAGTT+TGG - tig0025808:55674-55693 None:intergenic 25.0%
!!! TTTTTTTTTCATCTCATGCA+TGG + tig0025808:55703-55722 Msa1424990:intron 25.0%
!!! ATTATAGGATAGTTTTGTTG+TGG + tig0025808:56917-56936 Msa1424990:three_prime_UTR 25.0%
!! TGTGGTAATTTTGTAATTGA+CGG + tig0025808:56935-56954 Msa1424990:three_prime_UTR 25.0%
!!! TTTTATGTCATTGGTTTAGT+AGG + tig0025808:56979-56998 Msa1424990:three_prime_UTR 25.0%
!!! TTTATGTCATTGGTTTAGTA+GGG + tig0025808:56980-56999 Msa1424990:three_prime_UTR 25.0%
! ATTGTCACATTATACTACTT+TGG + tig0025808:55328-55347 Msa1424990:CDS 25.0%
!!! AAGAAAGATTTTGACAATAG+GGG - tig0025808:55525-55544 None:intergenic 25.0%
! GTTGAAAACTTAAGTTAGTT+TGG - tig0025808:55674-55693 None:intergenic 25.0%
!!! TTTTTTTTTCATCTCATGCA+TGG + tig0025808:55703-55722 Msa1424990:intron 25.0%
!!! ATTATAGGATAGTTTTGTTG+TGG + tig0025808:56917-56936 Msa1424990:three_prime_UTR 25.0%
!! TGTGGTAATTTTGTAATTGA+CGG + tig0025808:56935-56954 Msa1424990:three_prime_UTR 25.0%
!!! TTTTATGTCATTGGTTTAGT+AGG + tig0025808:56979-56998 Msa1424990:three_prime_UTR 25.0%
!!! TTTATGTCATTGGTTTAGTA+GGG + tig0025808:56980-56999 Msa1424990:three_prime_UTR 25.0%
ATCAAAATGAAAGTGAGAAG+AGG - tig0025808:55394-55413 None:intergenic 30.0%
TCATGCATGGAAATATTACA+AGG + tig0025808:55716-55735 Msa1424990:intron 30.0%
CTTACTACTAAAAAGCTGTA+TGG + tig0025808:55754-55773 Msa1424990:intron 30.0%
TACTAAAAAGCTGTATGGTT+TGG + tig0025808:55759-55778 Msa1424990:intron 30.0%
ATCACATTTATGTTCTGTGT+CGG - tig0025808:55895-55914 None:intergenic 30.0%
!! TTACCATTTTTGTGTTGTTG+TGG + tig0025808:56013-56032 Msa1424990:intron 30.0%
! TTGTTGTGGTGACAAAATTT+TGG + tig0025808:56027-56046 Msa1424990:intron 30.0%
! TGTTGTGGTGACAAAATTTT+GGG + tig0025808:56028-56047 Msa1424990:intron 30.0%
TTTCATAACATTTGCAATGC+AGG + tig0025808:56054-56073 Msa1424990:intron 30.0%
!! CTGTTACTTTATTCTGTTGT+GGG - tig0025808:56101-56120 None:intergenic 30.0%
!! ACTGTTACTTTATTCTGTTG+TGG - tig0025808:56102-56121 None:intergenic 30.0%
!! CTTATTGTTCTTAGCTTTGT+TGG - tig0025808:56226-56245 None:intergenic 30.0%
! TTTTCTTTTGCTGAGTTTCT+TGG - tig0025808:56266-56285 None:intergenic 30.0%
GAAAATGCTGAAAAGAGTAA+CGG + tig0025808:56342-56361 Msa1424990:CDS 30.0%
GTGTAGATTGAAACTGATAA+GGG - tig0025808:56800-56819 None:intergenic 30.0%
TTCAGTGATGAAAATGCAAA+TGG + tig0025808:56840-56859 Msa1424990:CDS 30.0%
TCAGTGATGAAAATGCAAAT+GGG + tig0025808:56841-56860 Msa1424990:CDS 30.0%
!! TTATGTCATTGGTTTAGTAG+GGG + tig0025808:56981-57000 Msa1424990:three_prime_UTR 30.0%
ATCAAAATGAAAGTGAGAAG+AGG - tig0025808:55394-55413 None:intergenic 30.0%
TCATGCATGGAAATATTACA+AGG + tig0025808:55716-55735 Msa1424990:intron 30.0%
CTTACTACTAAAAAGCTGTA+TGG + tig0025808:55754-55773 Msa1424990:intron 30.0%
TACTAAAAAGCTGTATGGTT+TGG + tig0025808:55759-55778 Msa1424990:intron 30.0%
ATCACATTTATGTTCTGTGT+CGG - tig0025808:55895-55914 None:intergenic 30.0%
!! TTACCATTTTTGTGTTGTTG+TGG + tig0025808:56013-56032 Msa1424990:intron 30.0%
! TTGTTGTGGTGACAAAATTT+TGG + tig0025808:56027-56046 Msa1424990:intron 30.0%
! TGTTGTGGTGACAAAATTTT+GGG + tig0025808:56028-56047 Msa1424990:intron 30.0%
TTTCATAACATTTGCAATGC+AGG + tig0025808:56054-56073 Msa1424990:intron 30.0%
!! CTGTTACTTTATTCTGTTGT+GGG - tig0025808:56101-56120 None:intergenic 30.0%
!! ACTGTTACTTTATTCTGTTG+TGG - tig0025808:56102-56121 None:intergenic 30.0%
!! CTTATTGTTCTTAGCTTTGT+TGG - tig0025808:56226-56245 None:intergenic 30.0%
! TTTTCTTTTGCTGAGTTTCT+TGG - tig0025808:56266-56285 None:intergenic 30.0%
GAAAATGCTGAAAAGAGTAA+CGG + tig0025808:56342-56361 Msa1424990:CDS 30.0%
GTGTAGATTGAAACTGATAA+GGG - tig0025808:56800-56819 None:intergenic 30.0%
TTCAGTGATGAAAATGCAAA+TGG + tig0025808:56840-56859 Msa1424990:CDS 30.0%
TCAGTGATGAAAATGCAAAT+GGG + tig0025808:56841-56860 Msa1424990:CDS 30.0%
!! TTATGTCATTGGTTTAGTAG+GGG + tig0025808:56981-57000 Msa1424990:three_prime_UTR 30.0%
!!! GCTTGTTTCCTTTGTTTTCT+TGG + tig0025808:55362-55381 Msa1424990:CDS 35.0%
GGAAAATGCCAAGAAAACAA+AGG - tig0025808:55373-55392 None:intergenic 35.0%
TCCATTAGAAAGAAGTGGTA+GGG - tig0025808:55444-55463 None:intergenic 35.0%
ATCCATTAGAAAGAAGTGGT+AGG - tig0025808:55445-55464 None:intergenic 35.0%
TAGCATCCATTAGAAAGAAG+TGG - tig0025808:55449-55468 None:intergenic 35.0%
CTTGTTACCTGATACTTCAA+AGG - tig0025808:55480-55499 None:intergenic 35.0%
!!! TTGGTTTTGTTTCACAGACA+TGG + tig0025808:55562-55581 Msa1424990:intron 35.0%
AAAGTTTCTATCCACTGTGA+AGG + tig0025808:55591-55610 Msa1424990:CDS 35.0%
!! AAAGTTCTTCAGAGCATTGA+TGG + tig0025808:55633-55652 Msa1424990:CDS 35.0%
! TAAAAAGCTGTATGGTTTGG+TGG + tig0025808:55762-55781 Msa1424990:intron 35.0%
ACACTAACATTGTCACTAAC+TGG - tig0025808:55956-55975 None:intergenic 35.0%
TCACCACAACAACACAAAAA+TGG - tig0025808:56019-56038 None:intergenic 35.0%
! GTTGTGGTGACAAAATTTTG+GGG + tig0025808:56029-56048 Msa1424990:intron 35.0%
CAGAATAAAGTAACAGTCAC+CGG + tig0025808:56105-56124 Msa1424990:CDS 35.0%
GTTCAGTATTTGCAGAAGAA+TGG - tig0025808:56290-56309 None:intergenic 35.0%
ACTAACACAAAAACCAATGC+AGG + tig0025808:56378-56397 Msa1424990:CDS 35.0%
AAGATGAAGAAAACTCAGAG+TGG + tig0025808:56489-56508 Msa1424990:CDS 35.0%
AAAGGAGGATAACATGTTTC+TGG - tig0025808:56666-56685 None:intergenic 35.0%
AGAAACATGTTATCCTCCTT+TGG + tig0025808:56665-56684 Msa1424990:CDS 35.0%
TTACAACAGATTATGTCCCA+TGG + tig0025808:56707-56726 Msa1424990:CDS 35.0%
TACAACAGATTATGTCCCAT+GGG + tig0025808:56708-56727 Msa1424990:CDS 35.0%
! AATGGTGGAACATAGTAAGA+AGG - tig0025808:56747-56766 None:intergenic 35.0%
GGTGTAGATTGAAACTGATA+AGG - tig0025808:56801-56820 None:intergenic 35.0%
AAGAACTCAAAGGGAATCAA+AGG - tig0025808:56822-56841 None:intergenic 35.0%
TCATCACTGAAGAACTCAAA+GGG - tig0025808:56831-56850 None:intergenic 35.0%
TTCATCACTGAAGAACTCAA+AGG - tig0025808:56832-56851 None:intergenic 35.0%
!! GAAGATCTTAGTCTTAACAC+TGG + tig0025808:57019-57038 Msa1424990:three_prime_UTR 35.0%
!!! GCTTGTTTCCTTTGTTTTCT+TGG + tig0025808:55362-55381 Msa1424990:CDS 35.0%
GGAAAATGCCAAGAAAACAA+AGG - tig0025808:55373-55392 None:intergenic 35.0%
TCCATTAGAAAGAAGTGGTA+GGG - tig0025808:55444-55463 None:intergenic 35.0%
ATCCATTAGAAAGAAGTGGT+AGG - tig0025808:55445-55464 None:intergenic 35.0%
TAGCATCCATTAGAAAGAAG+TGG - tig0025808:55449-55468 None:intergenic 35.0%
CTTGTTACCTGATACTTCAA+AGG - tig0025808:55480-55499 None:intergenic 35.0%
!!! TTGGTTTTGTTTCACAGACA+TGG + tig0025808:55562-55581 Msa1424990:intron 35.0%
AAAGTTTCTATCCACTGTGA+AGG + tig0025808:55591-55610 Msa1424990:CDS 35.0%
!! AAAGTTCTTCAGAGCATTGA+TGG + tig0025808:55633-55652 Msa1424990:CDS 35.0%
! TAAAAAGCTGTATGGTTTGG+TGG + tig0025808:55762-55781 Msa1424990:intron 35.0%
ACACTAACATTGTCACTAAC+TGG - tig0025808:55956-55975 None:intergenic 35.0%
TCACCACAACAACACAAAAA+TGG - tig0025808:56019-56038 None:intergenic 35.0%
! GTTGTGGTGACAAAATTTTG+GGG + tig0025808:56029-56048 Msa1424990:intron 35.0%
CAGAATAAAGTAACAGTCAC+CGG + tig0025808:56105-56124 Msa1424990:CDS 35.0%
GTTCAGTATTTGCAGAAGAA+TGG - tig0025808:56290-56309 None:intergenic 35.0%
ACTAACACAAAAACCAATGC+AGG + tig0025808:56378-56397 Msa1424990:CDS 35.0%
AAGATGAAGAAAACTCAGAG+TGG + tig0025808:56489-56508 Msa1424990:CDS 35.0%
AAAGGAGGATAACATGTTTC+TGG - tig0025808:56666-56685 None:intergenic 35.0%
AGAAACATGTTATCCTCCTT+TGG + tig0025808:56665-56684 Msa1424990:CDS 35.0%
TTACAACAGATTATGTCCCA+TGG + tig0025808:56707-56726 Msa1424990:CDS 35.0%
TACAACAGATTATGTCCCAT+GGG + tig0025808:56708-56727 Msa1424990:CDS 35.0%
! AATGGTGGAACATAGTAAGA+AGG - tig0025808:56747-56766 None:intergenic 35.0%
GGTGTAGATTGAAACTGATA+AGG - tig0025808:56801-56820 None:intergenic 35.0%
AAGAACTCAAAGGGAATCAA+AGG - tig0025808:56822-56841 None:intergenic 35.0%
TCATCACTGAAGAACTCAAA+GGG - tig0025808:56831-56850 None:intergenic 35.0%
TTCATCACTGAAGAACTCAA+AGG - tig0025808:56832-56851 None:intergenic 35.0%
!! GAAGATCTTAGTCTTAACAC+TGG + tig0025808:57019-57038 Msa1424990:three_prime_UTR 35.0%
! AGAAGGAGCAGTGTGTTATT+GGG + tig0025808:55303-55322 Msa1424990:CDS 40.0%
TACTACTTTGGTACCCATCT+TGG + tig0025808:55340-55359 Msa1424990:CDS 40.0%
CAAAGGAAACAAGCCAAGAT+GGG - tig0025808:55356-55375 None:intergenic 40.0%
ACAAAGGAAACAAGCCAAGA+TGG - tig0025808:55357-55376 None:intergenic 40.0%
TCCCTACCACTTCTTTCTAA+TGG + tig0025808:55440-55459 Msa1424990:CDS 40.0%
CTGATACTTCAAAGGTTGTG+AGG - tig0025808:55472-55491 None:intergenic 40.0%
!! CTCACAACCTTTGAAGTATC+AGG + tig0025808:55470-55489 Msa1424990:CDS 40.0%
CCATACTCATCTTCAATCTG+AGG - tig0025808:55823-55842 None:intergenic 40.0%
CCTCAGATTGAAGATGAGTA+TGG + tig0025808:55820-55839 Msa1424990:intron 40.0%
ATAAGGAAACTTGCCAAAGC+TGG + tig0025808:56150-56169 Msa1424990:CDS 40.0%
TTGGAATCCTTTACTTTCCC+GGG - tig0025808:56207-56226 None:intergenic 40.0%
GTTGGAATCCTTTACTTTCC+CGG - tig0025808:56208-56227 None:intergenic 40.0%
CAGGAAACAAAGAACAAGAG+TGG + tig0025808:56435-56454 Msa1424990:CDS 40.0%
AACAAGAGTGGTCAAAGTGA+CGG + tig0025808:56447-56466 Msa1424990:CDS 40.0%
ATGAAGAAAACTCAGAGTGG+TGG + tig0025808:56492-56511 Msa1424990:CDS 40.0%
TACTGTAACTGTACCAAAGG+AGG - tig0025808:56681-56700 None:intergenic 40.0%
GCATACTGTAACTGTACCAA+AGG - tig0025808:56684-56703 None:intergenic 40.0%
ATTATGTCCCATGGGAACAA+TGG + tig0025808:56716-56735 Msa1424990:CDS 40.0%
TTATGTCCCATGGGAACAAT+GGG + tig0025808:56717-56736 Msa1424990:CDS 40.0%
! AGAAGGAGCAGTGTGTTATT+GGG + tig0025808:55303-55322 Msa1424990:CDS 40.0%
TACTACTTTGGTACCCATCT+TGG + tig0025808:55340-55359 Msa1424990:CDS 40.0%
CAAAGGAAACAAGCCAAGAT+GGG - tig0025808:55356-55375 None:intergenic 40.0%
ACAAAGGAAACAAGCCAAGA+TGG - tig0025808:55357-55376 None:intergenic 40.0%
TCCCTACCACTTCTTTCTAA+TGG + tig0025808:55440-55459 Msa1424990:CDS 40.0%
CTGATACTTCAAAGGTTGTG+AGG - tig0025808:55472-55491 None:intergenic 40.0%
!! CTCACAACCTTTGAAGTATC+AGG + tig0025808:55470-55489 Msa1424990:CDS 40.0%
CCATACTCATCTTCAATCTG+AGG - tig0025808:55823-55842 None:intergenic 40.0%
CCTCAGATTGAAGATGAGTA+TGG + tig0025808:55820-55839 Msa1424990:intron 40.0%
ATAAGGAAACTTGCCAAAGC+TGG + tig0025808:56150-56169 Msa1424990:CDS 40.0%
TTGGAATCCTTTACTTTCCC+GGG - tig0025808:56207-56226 None:intergenic 40.0%
GTTGGAATCCTTTACTTTCC+CGG - tig0025808:56208-56227 None:intergenic 40.0%
CAGGAAACAAAGAACAAGAG+TGG + tig0025808:56435-56454 Msa1424990:CDS 40.0%
AACAAGAGTGGTCAAAGTGA+CGG + tig0025808:56447-56466 Msa1424990:CDS 40.0%
ATGAAGAAAACTCAGAGTGG+TGG + tig0025808:56492-56511 Msa1424990:CDS 40.0%
TACTGTAACTGTACCAAAGG+AGG - tig0025808:56681-56700 None:intergenic 40.0%
GCATACTGTAACTGTACCAA+AGG - tig0025808:56684-56703 None:intergenic 40.0%
ATTATGTCCCATGGGAACAA+TGG + tig0025808:56716-56735 Msa1424990:CDS 40.0%
TTATGTCCCATGGGAACAAT+GGG + tig0025808:56717-56736 Msa1424990:CDS 40.0%
CAGAAGGAGCAGTGTGTTAT+TGG + tig0025808:55302-55321 Msa1424990:CDS 45.0%
! TGTTGGTGTCTCACATGTGT+CGG + tig0025808:55854-55873 Msa1424990:intron 45.0%
AGTCTCAAGAGCAGCATTTC+CGG - tig0025808:56127-56146 None:intergenic 45.0%
CTGCTCTTGAGACTCTGATA+AGG + tig0025808:56133-56152 Msa1424990:CDS 45.0%
AAGATTCTCCGGCAAAACCT+CGG - tig0025808:56184-56203 None:intergenic 45.0%
GAATCTTCCCGGGAAAGTAA+AGG + tig0025808:56197-56216 Msa1424990:CDS 45.0%
TCTTTGCCAGAGTTGAGGTT+GGG - tig0025808:56312-56331 None:intergenic 45.0%
CATTGTCTTTGCCAGAGTTG+AGG - tig0025808:56317-56336 None:intergenic 45.0%
CTCAACTCTGGCAAAGACAA+TGG + tig0025808:56315-56334 Msa1424990:CDS 45.0%
AAAAACCAATGCAGGCTCAC+CGG + tig0025808:56386-56405 Msa1424990:CDS 45.0%
AAGAAAACTCAGAGTGGTGG+TGG + tig0025808:56495-56514 Msa1424990:CDS 45.0%
! GAACTGGTACTGGAAGCAAT+GGG + tig0025808:56523-56542 Msa1424990:CDS 45.0%
GGGTTGAATTCAGCATCTAC+TGG + tig0025808:56543-56562 Msa1424990:CDS 45.0%
AATTCTGTTCCAGTGTGTGC+AGG - tig0025808:56573-56592 None:intergenic 45.0%
TGTACGATTGCTGACGTGTA+GGG - tig0025808:56635-56654 None:intergenic 45.0%
ATGTACGATTGCTGACGTGT+AGG - tig0025808:56636-56655 None:intergenic 45.0%
TCAAAGCCTGCACACATGTA+GGG - tig0025808:56771-56790 None:intergenic 45.0%
ATCAAAGCCTGCACACATGT+AGG - tig0025808:56772-56791 None:intergenic 45.0%
CAGAAGGAGCAGTGTGTTAT+TGG + tig0025808:55302-55321 Msa1424990:CDS 45.0%
! TGTTGGTGTCTCACATGTGT+CGG + tig0025808:55854-55873 Msa1424990:intron 45.0%
AGTCTCAAGAGCAGCATTTC+CGG - tig0025808:56127-56146 None:intergenic 45.0%
CTGCTCTTGAGACTCTGATA+AGG + tig0025808:56133-56152 Msa1424990:CDS 45.0%
AAGATTCTCCGGCAAAACCT+CGG - tig0025808:56184-56203 None:intergenic 45.0%
GAATCTTCCCGGGAAAGTAA+AGG + tig0025808:56197-56216 Msa1424990:CDS 45.0%
TCTTTGCCAGAGTTGAGGTT+GGG - tig0025808:56312-56331 None:intergenic 45.0%
CATTGTCTTTGCCAGAGTTG+AGG - tig0025808:56317-56336 None:intergenic 45.0%
CTCAACTCTGGCAAAGACAA+TGG + tig0025808:56315-56334 Msa1424990:CDS 45.0%
AAAAACCAATGCAGGCTCAC+CGG + tig0025808:56386-56405 Msa1424990:CDS 45.0%
AAGAAAACTCAGAGTGGTGG+TGG + tig0025808:56495-56514 Msa1424990:CDS 45.0%
! GAACTGGTACTGGAAGCAAT+GGG + tig0025808:56523-56542 Msa1424990:CDS 45.0%
GGGTTGAATTCAGCATCTAC+TGG + tig0025808:56543-56562 Msa1424990:CDS 45.0%
AATTCTGTTCCAGTGTGTGC+AGG - tig0025808:56573-56592 None:intergenic 45.0%
TGTACGATTGCTGACGTGTA+GGG - tig0025808:56635-56654 None:intergenic 45.0%
ATGTACGATTGCTGACGTGT+AGG - tig0025808:56636-56655 None:intergenic 45.0%
TCAAAGCCTGCACACATGTA+GGG - tig0025808:56771-56790 None:intergenic 45.0%
ATCAAAGCCTGCACACATGT+AGG - tig0025808:56772-56791 None:intergenic 45.0%
GAGTGATATTGAAGGGGCAG+AGG + tig0025808:55272-55291 Msa1424990:CDS 50.0%
TAGGGAGAGTGAGAGGGAAT+TGG - tig0025808:55426-55445 None:intergenic 50.0%
AAGTGGTAGGGAGAGTGAGA+GGG - tig0025808:55432-55451 None:intergenic 50.0%
TCCACTGTGAAGGTTGCAGA+AGG + tig0025808:55601-55620 Msa1424990:CDS 50.0%
TCCTTCTGCAACCTTCACAG+TGG - tig0025808:55605-55624 None:intergenic 50.0%
!! AAGCTGTATGGTTTGGTGGC+TGG + tig0025808:55766-55785 Msa1424990:intron 50.0%
TGTGAGACACCAACACGTGT+CGG - tig0025808:55849-55868 None:intergenic 50.0%
! AAAACACGCCGAGGTTTTGC+CGG + tig0025808:56173-56192 Msa1424990:CDS 50.0%
! GTTTTGCCGGAGAATCTTCC+CGG + tig0025808:56186-56205 Msa1424990:CDS 50.0%
! TTTTGCCGGAGAATCTTCCC+GGG + tig0025808:56187-56206 Msa1424990:CDS 50.0%
ACTTTCCCGGGAAGATTCTC+CGG - tig0025808:56195-56214 None:intergenic 50.0%
ACTGAACCCAACCTCAACTC+TGG + tig0025808:56303-56322 Msa1424990:CDS 50.0%
GTCTTTGCCAGAGTTGAGGT+TGG - tig0025808:56313-56332 None:intergenic 50.0%
AAGAGTGGTCAAAGTGACGG+AGG + tig0025808:56450-56469 Msa1424990:CDS 50.0%
! CAAAGTGACGGAGGAGATTC+TGG + tig0025808:56459-56478 Msa1424990:CDS 50.0%
! GGAACTGGTACTGGAAGCAA+TGG + tig0025808:56522-56541 Msa1424990:CDS 50.0%
GGAACAGAATTCCAGAGTCC+AGG + tig0025808:56582-56601 Msa1424990:CDS 50.0%
AGAATTCCAGAGTCCAGGTC+AGG + tig0025808:56587-56606 Msa1424990:CDS 50.0%
GGACAACCCATTGTTCCCAT+GGG - tig0025808:56726-56745 None:intergenic 50.0%
AGGACAACCCATTGTTCCCA+TGG - tig0025808:56727-56746 None:intergenic 50.0%
! GCACACATGTAGGGTAATGG+TGG - tig0025808:56762-56781 None:intergenic 50.0%
CCTGCACACATGTAGGGTAA+TGG - tig0025808:56765-56784 None:intergenic 50.0%
CCATTACCCTACATGTGTGC+AGG + tig0025808:56762-56781 Msa1424990:CDS 50.0%
GAGTGATATTGAAGGGGCAG+AGG + tig0025808:55272-55291 Msa1424990:CDS 50.0%
TAGGGAGAGTGAGAGGGAAT+TGG - tig0025808:55426-55445 None:intergenic 50.0%
AAGTGGTAGGGAGAGTGAGA+GGG - tig0025808:55432-55451 None:intergenic 50.0%
TCCACTGTGAAGGTTGCAGA+AGG + tig0025808:55601-55620 Msa1424990:CDS 50.0%
TCCTTCTGCAACCTTCACAG+TGG - tig0025808:55605-55624 None:intergenic 50.0%
!! AAGCTGTATGGTTTGGTGGC+TGG + tig0025808:55766-55785 Msa1424990:intron 50.0%
TGTGAGACACCAACACGTGT+CGG - tig0025808:55849-55868 None:intergenic 50.0%
! AAAACACGCCGAGGTTTTGC+CGG + tig0025808:56173-56192 Msa1424990:CDS 50.0%
! GTTTTGCCGGAGAATCTTCC+CGG + tig0025808:56186-56205 Msa1424990:CDS 50.0%
! TTTTGCCGGAGAATCTTCCC+GGG + tig0025808:56187-56206 Msa1424990:CDS 50.0%
ACTTTCCCGGGAAGATTCTC+CGG - tig0025808:56195-56214 None:intergenic 50.0%
ACTGAACCCAACCTCAACTC+TGG + tig0025808:56303-56322 Msa1424990:CDS 50.0%
GTCTTTGCCAGAGTTGAGGT+TGG - tig0025808:56313-56332 None:intergenic 50.0%
AAGAGTGGTCAAAGTGACGG+AGG + tig0025808:56450-56469 Msa1424990:CDS 50.0%
! CAAAGTGACGGAGGAGATTC+TGG + tig0025808:56459-56478 Msa1424990:CDS 50.0%
! GGAACTGGTACTGGAAGCAA+TGG + tig0025808:56522-56541 Msa1424990:CDS 50.0%
GGAACAGAATTCCAGAGTCC+AGG + tig0025808:56582-56601 Msa1424990:CDS 50.0%
AGAATTCCAGAGTCCAGGTC+AGG + tig0025808:56587-56606 Msa1424990:CDS 50.0%
GGACAACCCATTGTTCCCAT+GGG - tig0025808:56726-56745 None:intergenic 50.0%
AGGACAACCCATTGTTCCCA+TGG - tig0025808:56727-56746 None:intergenic 50.0%
! GCACACATGTAGGGTAATGG+TGG - tig0025808:56762-56781 None:intergenic 50.0%
CCTGCACACATGTAGGGTAA+TGG - tig0025808:56765-56784 None:intergenic 50.0%
CCATTACCCTACATGTGTGC+AGG + tig0025808:56762-56781 Msa1424990:CDS 50.0%
GAAGTGGTAGGGAGAGTGAG+AGG - tig0025808:55433-55452 None:intergenic 55.0%
GTATGGTGTCCGACACGTGT+TGG + tig0025808:55837-55856 Msa1424990:intron 55.0%
! CTCGGCGTGTTTTCCAGCTT+TGG - tig0025808:56166-56185 None:intergenic 55.0%
CAAAGCTGGAAAACACGCCG+AGG + tig0025808:56164-56183 Msa1424990:CDS 55.0%
AAGTCTCCGGCTGGTGGTAA+GGG + tig0025808:56411-56430 Msa1424990:CDS 55.0%
!! ACTCAGAGTGGTGGTGGAAC+TGG + tig0025808:56501-56520 Msa1424990:CDS 55.0%
!! AGTGGTGGTGGAACTGGAAC+TGG + tig0025808:56507-56526 Msa1424990:CDS 55.0%
GGTGGAACTGGAACTGGTAC+TGG + tig0025808:56513-56532 Msa1424990:CDS 55.0%
! CAGAGTCCAGGTCAGGTTGT+GGG + tig0025808:56594-56613 Msa1424990:CDS 55.0%
! AGAGTCCAGGTCAGGTTGTG+GGG + tig0025808:56595-56614 Msa1424990:CDS 55.0%
GAAGTGGTAGGGAGAGTGAG+AGG - tig0025808:55433-55452 None:intergenic 55.0%
GTATGGTGTCCGACACGTGT+TGG + tig0025808:55837-55856 Msa1424990:intron 55.0%
! CTCGGCGTGTTTTCCAGCTT+TGG - tig0025808:56166-56185 None:intergenic 55.0%
CAAAGCTGGAAAACACGCCG+AGG + tig0025808:56164-56183 Msa1424990:CDS 55.0%
AAGTCTCCGGCTGGTGGTAA+GGG + tig0025808:56411-56430 Msa1424990:CDS 55.0%
!! ACTCAGAGTGGTGGTGGAAC+TGG + tig0025808:56501-56520 Msa1424990:CDS 55.0%
!! AGTGGTGGTGGAACTGGAAC+TGG + tig0025808:56507-56526 Msa1424990:CDS 55.0%
GGTGGAACTGGAACTGGTAC+TGG + tig0025808:56513-56532 Msa1424990:CDS 55.0%
! CAGAGTCCAGGTCAGGTTGT+GGG + tig0025808:56594-56613 Msa1424990:CDS 55.0%
! AGAGTCCAGGTCAGGTTGTG+GGG + tig0025808:56595-56614 Msa1424990:CDS 55.0%
GGGCAGAGGAAAGCAGCAGA+AGG + tig0025808:55286-55305 Msa1424990:CDS 60.0%
CTTCTCCGGTGAGCCTGCAT+TGG - tig0025808:56394-56413 None:intergenic 60.0%
AGGCTCACCGGAGAAGTCTC+CGG + tig0025808:56398-56417 Msa1424990:CDS 60.0%
GAAGTCTCCGGCTGGTGGTA+AGG + tig0025808:56410-56429 Msa1424990:CDS 60.0%
AGTCTCCGGCTGGTGGTAAG+GGG + tig0025808:56412-56431 Msa1424990:CDS 60.0%
ACTGGTGCACCTGCACACAC+TGG + tig0025808:56561-56580 Msa1424990:CDS 60.0%
CCACAACCTGACCTGGACTC+TGG - tig0025808:56596-56615 None:intergenic 60.0%
! CCAGAGTCCAGGTCAGGTTG+TGG + tig0025808:56593-56612 Msa1424990:CDS 60.0%
ACTTGCCCCACAACCTGACC+TGG - tig0025808:56603-56622 None:intergenic 60.0%
GGGCAGAGGAAAGCAGCAGA+AGG + tig0025808:55286-55305 Msa1424990:CDS 60.0%
CTTCTCCGGTGAGCCTGCAT+TGG - tig0025808:56394-56413 None:intergenic 60.0%
AGGCTCACCGGAGAAGTCTC+CGG + tig0025808:56398-56417 Msa1424990:CDS 60.0%
GAAGTCTCCGGCTGGTGGTA+AGG + tig0025808:56410-56429 Msa1424990:CDS 60.0%
AGTCTCCGGCTGGTGGTAAG+GGG + tig0025808:56412-56431 Msa1424990:CDS 60.0%
ACTGGTGCACCTGCACACAC+TGG + tig0025808:56561-56580 Msa1424990:CDS 60.0%
CCACAACCTGACCTGGACTC+TGG - tig0025808:56596-56615 None:intergenic 60.0%
! CCAGAGTCCAGGTCAGGTTG+TGG + tig0025808:56593-56612 Msa1424990:CDS 60.0%
ACTTGCCCCACAACCTGACC+TGG - tig0025808:56603-56622 None:intergenic 60.0%
TCACCGGAGAAGTCTCCGGC+TGG + tig0025808:56402-56421 Msa1424990:CDS 65.0%
CCACCAGCCGGAGACTTCTC+CGG - tig0025808:56408-56427 None:intergenic 65.0%
TCCTGCCCCTTACCACCAGC+CGG - tig0025808:56420-56439 None:intergenic 65.0%
TCACCGGAGAAGTCTCCGGC+TGG + tig0025808:56402-56421 Msa1424990:CDS 65.0%
CCACCAGCCGGAGACTTCTC+CGG - tig0025808:56408-56427 None:intergenic 65.0%
TCCTGCCCCTTACCACCAGC+CGG - tig0025808:56420-56439 None:intergenic 65.0%
CCGGAGAAGTCTCCGGCTGG+TGG + tig0025808:56405-56424 Msa1424990:CDS 70.0%
TCCGGCTGGTGGTAAGGGGC+AGG + tig0025808:56416-56435 Msa1424990:CDS 70.0%
CCGGAGAAGTCTCCGGCTGG+TGG + tig0025808:56405-56424 Msa1424990:CDS 70.0%
TCCGGCTGGTGGTAAGGGGC+AGG + tig0025808:56416-56435 Msa1424990:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0025808 gene 55270 57082 55270 ID=Msa1424990;Name=Msa1424990
tig0025808 mRNA 55270 57082 55270 ID=Msa1424990-mRNA-1;Parent=Msa1424990;Name=Msa1424990-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.66|1|1|1|3|204|366
tig0025808 exon 55270 55491 55270 ID=Msa1424990-mRNA-1:exon:4060;Parent=Msa1424990-mRNA-1
tig0025808 exon 55579 55654 55579 ID=Msa1424990-mRNA-1:exon:4061;Parent=Msa1424990-mRNA-1
tig0025808 exon 56076 57082 56076 ID=Msa1424990-mRNA-1:exon:4062;Parent=Msa1424990-mRNA-1
tig0025808 CDS 55270 55491 55270 ID=Msa1424990-mRNA-1:cds;Parent=Msa1424990-mRNA-1
tig0025808 CDS 55579 55654 55579 ID=Msa1424990-mRNA-1:cds;Parent=Msa1424990-mRNA-1
tig0025808 CDS 56076 56878 56076 ID=Msa1424990-mRNA-1:cds;Parent=Msa1424990-mRNA-1
tig0025808 three_prime_UTR 56879 57082 56879 ID=Msa1424990-mRNA-1:three_prime_utr;Parent=Msa1424990-mRNA-1
Gene Sequence

>Msa1424990

ATGAGTGATATTGAAGGGGCAGAGGAAAGCAGCAGAAGGAGCAGTGTGTTATTGGGTCATTGTCACATTATACTACTTTGGTACCCATCTTGGCTTGTTTCCTTTGTTTTCTTGGCATTTTCCTCTTCTCACTTTCATTTTGATTTCAAGTTTCCAATTCCCTCTCACTCTCCCTACCACTTCTTTCTAATGGATGCTACCTCACAACCTTTGAAGTATCAGACATGGTTCTTGAAAGTTTCTATCCACTGTGAAGGTTGCAGAAGGAAAGTAAAGAAAGTTCTTCAGAGCATTGATGGAGTTTTTACTACAACAATCGACCCACAACAGAATAAAGTAACAGTCACCGGAAATGCTGCTCTTGAGACTCTGATAAGGAAACTTGCCAAAGCTGGAAAACACGCCGAGGTTTTGCCGGAGAATCTTCCCGGGAAAGTAAAGGATTCCAACAAAGCTAAGAACAATAAGAACAGTGAACAAAAAAACCAAGAAACTCAGCAAAAGAAAAACCATTCTTCTGCAAATACTGAACCCAACCTCAACTCTGGCAAAGACAATGGAATTGAAAATGCTGAAAAGAGTAACGGTAAAAGCAAGAGTACTAACACAAAAACCAATGCAGGCTCACCGGAGAAGTCTCCGGCTGGTGGTAAGGGGCAGGAAACAAAGAACAAGAGTGGTCAAAGTGACGGAGGAGATTCTGGTAAGAAGAAGATGAAGAAAACTCAGAGTGGTGGTGGAACTGGAACTGGTACTGGAAGCAATGGGTTGAATTCAGCATCTACTGGTGCACCTGCACACACTGGAACAGAATTCCAGAGTCCAGGTCAGGTTGTGGGGCAAGTGAATCTCAGCCCTACACGTCAGCAATCGTACATGTTGTATCCAGAAACATGTTATCCTCCTTTGGTACAGTTACAGTATGCAACTTACAACAGATTATGTCCCATGGGAACAATGGGTTGTCCTTCTTACTATGTTCCACCATTACCCTACATGTGTGCAGGCTTTGATCGTGACCCTTATCAGTTTCAATCTACACCTTTGATTCCCTTTGAGTTCTTCAGTGATGAAAATGCAAATGGGTGTTCTATTATGTGA
Protein sequence

>Msa1424990

MSDIEGAEESSRRSSVLLGHCHIILLWYPSWLVSFVFLAFSSSHFHFDFKFPIPSHSPYHFFLMDATSQPLKYQTWFLKVSIHCEGCRRKVKKVLQSIDGVFTTTIDPQQNKVTVTGNAALETLIRKLAKAGKHAEVLPENLPGKVKDSNKAKNNKNSEQKNQETQQKKNHSSANTEPNLNSGKDNGIENAEKSNGKSKSTNTKTNAGSPEKSPAGGKGQETKNKSGQSDGGDSGKKKMKKTQSGGGTGTGTGSNGLNSASTGAPAHTGTEFQSPGQVVGQVNLSPTRQQSYMLYPETCYPPLVQLQYATYNRLCPMGTMGCPSYYVPPLPYMCAGFDRDPYQFQSTPLIPFEFFSDENANGCSIM*