Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432410 | XP_024634147.1 | 93.521 | 957 | 51 | 4 | 3 | 955 | 1 | 950 | 0.0 | 1832 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432410 | sp|B6SFA4|MAA3_ARATH | 38.462 | 312 | 169 | 8 | 576 | 879 | 454 | 750 | 1.11e-50 | 196 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432410 | A0A396IQU7 | 93.690 | 935 | 50 | 3 | 3 | 935 | 1 | 928 | 0.0 | 1792 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1432410 | Msa1439540 | 0.974779 | 9.253146e-139 | -8.615850e-47 |
Msa0616070 | Msa1432410 | 0.804446 | 2.151491e-49 | -8.615850e-47 |
Msa0415520 | Msa1432410 | 0.972127 | 2.917328e-134 | -8.615850e-47 |
Msa1026510 | Msa1432410 | 0.801565 | 8.479763e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432410 | MtrunA17_Chr3g0109541 | 93.690 | 935 | 50 | 3 | 3 | 935 | 1 | 928 | 0.0 | 1792 |
Msa1432410 | MtrunA17_Chr5g0433371 | 58.842 | 933 | 354 | 11 | 8 | 929 | 8 | 921 | 0.0 | 1053 |
Msa1432410 | MtrunA17_Chr5g0433471 | 59.677 | 930 | 344 | 14 | 10 | 929 | 13 | 921 | 0.0 | 1027 |
Msa1432410 | MtrunA17_Chr5g0433321 | 56.163 | 933 | 358 | 13 | 1 | 923 | 1 | 892 | 0.0 | 1007 |
Msa1432410 | MtrunA17_Chr5g0433511 | 54.074 | 945 | 358 | 19 | 16 | 923 | 10 | 915 | 0.0 | 896 |
Msa1432410 | MtrunA17_Chr5g0433361 | 49.526 | 949 | 354 | 19 | 10 | 920 | 22 | 883 | 0.0 | 819 |
Msa1432410 | MtrunA17_Chr3g0109551 | 45.090 | 947 | 457 | 12 | 18 | 914 | 13 | 946 | 0.0 | 766 |
Msa1432410 | MtrunA17_Chr8g0375181 | 38.745 | 924 | 485 | 20 | 14 | 907 | 79 | 951 | 0.0 | 605 |
Msa1432410 | MtrunA17_Chr5g0433421 | 60.444 | 541 | 193 | 7 | 391 | 928 | 483 | 1005 | 0.0 | 605 |
Msa1432410 | MtrunA17_Chr5g0433421 | 47.421 | 504 | 233 | 11 | 10 | 504 | 9 | 489 | 2.20e-126 | 407 |
Msa1432410 | MtrunA17_Chr8g0375151 | 39.532 | 898 | 458 | 20 | 40 | 907 | 1 | 843 | 0.0 | 586 |
Msa1432410 | MtrunA17_Chr3g0094211 | 35.829 | 935 | 488 | 21 | 17 | 913 | 17 | 877 | 2.68e-180 | 549 |
Msa1432410 | MtrunA17_Chr8g0375191 | 38.017 | 918 | 474 | 18 | 17 | 907 | 25 | 874 | 1.92e-177 | 572 |
Msa1432410 | MtrunA17_Chr5g0433351 | 45.315 | 523 | 220 | 9 | 10 | 527 | 9 | 470 | 2.70e-125 | 388 |
Msa1432410 | MtrunA17_Chr5g0433341 | 68.449 | 187 | 58 | 1 | 576 | 761 | 5 | 191 | 1.06e-84 | 270 |
Msa1432410 | MtrunA17_Chr8g0375861 | 31.519 | 698 | 387 | 21 | 16 | 681 | 21 | 659 | 9.15e-83 | 293 |
Msa1432410 | MtrunA17_Chr8g0375871 | 31.519 | 698 | 387 | 21 | 16 | 681 | 21 | 659 | 1.02e-82 | 293 |
Msa1432410 | MtrunA17_Chr5g0433331 | 71.166 | 163 | 47 | 0 | 767 | 929 | 2 | 164 | 3.34e-72 | 235 |
Msa1432410 | MtrunA17_Chr8g0343741 | 36.391 | 338 | 196 | 10 | 555 | 886 | 943 | 1267 | 2.22e-46 | 181 |
Msa1432410 | MtrunA17_Chr5g0422511 | 35.577 | 312 | 189 | 7 | 576 | 885 | 450 | 751 | 4.37e-45 | 175 |
Msa1432410 | MtrunA17_Chr3g0117771 | 51.613 | 186 | 76 | 5 | 39 | 223 | 124 | 296 | 6.22e-45 | 164 |
Msa1432410 | MtrunA17_Chr1g0173701 | 33.758 | 314 | 167 | 9 | 594 | 887 | 82 | 374 | 2.00e-42 | 160 |
Msa1432410 | MtrunA17_Chr2g0334291 | 36.644 | 292 | 161 | 7 | 608 | 885 | 1791 | 2072 | 1.42e-40 | 163 |
Msa1432410 | MtrunA17_Chr5g0400101 | 36.076 | 316 | 180 | 8 | 573 | 882 | 607 | 906 | 6.72e-40 | 160 |
Msa1432410 | MtrunA17_Chr7g0257921 | 35.783 | 313 | 167 | 13 | 586 | 887 | 352 | 641 | 1.85e-32 | 134 |
Msa1432410 | MtrunA17_Chr5g0435821 | 59.048 | 105 | 38 | 1 | 801 | 905 | 11 | 110 | 5.45e-31 | 129 |
Msa1432410 | MtrunA17_Chr2g0304151 | 31.250 | 336 | 190 | 14 | 555 | 873 | 496 | 807 | 1.55e-24 | 110 |
Msa1432410 | MtrunA17_Chr5g0394941 | 31.250 | 336 | 190 | 14 | 555 | 873 | 496 | 807 | 1.88e-24 | 110 |
Msa1432410 | MtrunA17_Chr1g0165651 | 32.099 | 324 | 182 | 13 | 558 | 862 | 607 | 911 | 3.96e-24 | 109 |
Msa1432410 | MtrunA17_Chr1g0165031 | 28.832 | 274 | 158 | 11 | 608 | 864 | 1130 | 1383 | 1.52e-17 | 88.6 |
Msa1432410 | MtrunA17_Chr4g0030281 | 48.571 | 105 | 50 | 2 | 39 | 143 | 329 | 429 | 1.78e-17 | 87.4 |
Msa1432410 | MtrunA17_Chr7g0228141 | 30.741 | 270 | 143 | 12 | 609 | 858 | 509 | 754 | 4.65e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432410 | AT1G65810.1 | 45.976 | 907 | 393 | 18 | 18 | 907 | 22 | 848 | 0.0 | 727 |
Msa1432410 | AT1G65810.3 | 45.976 | 907 | 393 | 18 | 18 | 907 | 22 | 848 | 0.0 | 726 |
Msa1432410 | AT1G65810.2 | 45.976 | 907 | 393 | 18 | 18 | 907 | 22 | 848 | 0.0 | 726 |
Msa1432410 | AT5G37150.1 | 43.919 | 888 | 418 | 17 | 17 | 901 | 8 | 818 | 0.0 | 686 |
Msa1432410 | AT1G65780.1 | 43.626 | 910 | 440 | 21 | 18 | 909 | 11 | 865 | 0.0 | 669 |
Msa1432410 | AT5G52090.1 | 47.042 | 710 | 319 | 10 | 194 | 901 | 1 | 655 | 0.0 | 619 |
Msa1432410 | AT5G37140.1 | 46.448 | 732 | 332 | 14 | 189 | 919 | 12 | 684 | 0.0 | 598 |
Msa1432410 | AT4G05540.1 | 45.541 | 740 | 333 | 16 | 138 | 868 | 11 | 689 | 0.0 | 575 |
Msa1432410 | AT5G37165.1 | 50.694 | 432 | 193 | 8 | 491 | 919 | 4 | 418 | 8.12e-133 | 406 |
Msa1432410 | AT5G37030.1 | 63.140 | 293 | 99 | 4 | 605 | 895 | 348 | 633 | 1.19e-116 | 371 |
Msa1432410 | AT5G37030.1 | 36.641 | 393 | 190 | 12 | 17 | 404 | 8 | 346 | 1.22e-54 | 201 |
Msa1432410 | AT5G37160.1 | 34.360 | 422 | 222 | 10 | 16 | 403 | 16 | 416 | 3.59e-66 | 229 |
Msa1432410 | AT4G15570.2 | 38.462 | 312 | 169 | 8 | 576 | 879 | 365 | 661 | 5.96e-52 | 195 |
Msa1432410 | AT4G15570.4 | 38.462 | 312 | 169 | 8 | 576 | 879 | 365 | 661 | 5.96e-52 | 195 |
Msa1432410 | AT4G15570.3 | 38.462 | 312 | 169 | 8 | 576 | 879 | 454 | 750 | 1.13e-51 | 196 |
Msa1432410 | AT4G15570.1 | 38.462 | 312 | 169 | 8 | 576 | 879 | 454 | 750 | 1.13e-51 | 196 |
Msa1432410 | AT2G19120.1 | 38.462 | 312 | 166 | 9 | 584 | 886 | 753 | 1047 | 8.36e-47 | 182 |
Msa1432410 | AT4G30100.2 | 38.511 | 309 | 162 | 10 | 584 | 882 | 916 | 1206 | 2.59e-46 | 181 |
Msa1432410 | AT4G30100.1 | 38.511 | 309 | 162 | 10 | 584 | 882 | 916 | 1206 | 2.59e-46 | 181 |
Msa1432410 | AT1G16800.3 | 38.652 | 282 | 153 | 8 | 608 | 879 | 1649 | 1920 | 1.19e-41 | 167 |
Msa1432410 | AT1G16800.1 | 38.652 | 282 | 153 | 8 | 608 | 879 | 1607 | 1878 | 1.26e-41 | 167 |
Msa1432410 | AT1G16800.2 | 38.652 | 282 | 153 | 8 | 608 | 879 | 1719 | 1990 | 1.30e-41 | 167 |
Msa1432410 | AT5G47010.1 | 35.256 | 312 | 188 | 6 | 573 | 882 | 619 | 918 | 1.45e-39 | 159 |
Msa1432410 | AT1G05460.2 | 35.350 | 314 | 165 | 14 | 581 | 873 | 513 | 809 | 9.15e-26 | 115 |
Msa1432410 | AT2G03270.1 | 32.278 | 316 | 188 | 12 | 580 | 887 | 339 | 636 | 9.33e-26 | 114 |
Msa1432410 | AT1G05460.1 | 35.238 | 315 | 166 | 14 | 580 | 873 | 512 | 809 | 1.30e-25 | 114 |
Msa1432410 | AT5G35970.1 | 32.209 | 326 | 179 | 12 | 558 | 862 | 615 | 919 | 3.08e-25 | 113 |
Msa1432410 | AT1G08840.3 | 31.636 | 275 | 146 | 9 | 609 | 864 | 1053 | 1304 | 1.61e-22 | 105 |
Msa1432410 | AT1G08840.1 | 31.636 | 275 | 146 | 9 | 609 | 864 | 1018 | 1269 | 1.65e-22 | 105 |
Msa1432410 | AT1G08840.4 | 31.636 | 275 | 146 | 9 | 609 | 864 | 1050 | 1301 | 1.69e-22 | 105 |
Msa1432410 | AT1G08840.2 | 31.636 | 275 | 146 | 9 | 609 | 864 | 1037 | 1288 | 1.80e-22 | 104 |
Find 198 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGACACTATTAAACTTATT+TGG | 0.047323 | tig0027096:+8478 | Msa1432410:CDS |
TATCACATTGCTTATGTTTA+TGG | 0.056422 | tig0027096:+7727 | Msa1432410:CDS |
GACTGTCAACTTTGTATTTC+TGG | 0.059932 | tig0027096:+8339 | Msa1432410:CDS |
TCCTCGTAGAATTCTTTATT+TGG | 0.128508 | tig0027096:-9800 | None:intergenic |
AATACCGAGGTTTCATATTA+TGG | 0.193650 | tig0027096:-11065 | None:intergenic |
CTTGGATGATATGAAGCTTT+TGG | 0.223969 | tig0027096:-7560 | None:intergenic |
TACATGATCTTCATTGAAAA+TGG | 0.240839 | tig0027096:-10999 | None:intergenic |
CCTTGTCCCTGCAGAAGTTT+TGG | 0.249976 | tig0027096:-6952 | None:intergenic |
TGACACTATTAAACTTATTT+GGG | 0.250229 | tig0027096:+8479 | Msa1432410:CDS |
AGACATTGCCTTTGGATATT+AGG | 0.254480 | tig0027096:+10477 | Msa1432410:intron |
TATAAGCTTGATGCAGAAAA+TGG | 0.260363 | tig0027096:+8864 | Msa1432410:CDS |
TGTACGAACCTCTGGTATAA+TGG | 0.263774 | tig0027096:-10921 | None:intergenic |
CTTAAGGCTTTCAATGATCT+TGG | 0.266754 | tig0027096:-9984 | None:intergenic |
GTTAGTGTTCGTTCTGTTGA+TGG | 0.273050 | tig0027096:+10254 | Msa1432410:CDS |
ACCCTTAGCTATGTTTATAA+AGG | 0.275468 | tig0027096:-9903 | None:intergenic |
GGATCTTGATCTTGCAAGTT+TGG | 0.277386 | tig0027096:+6889 | Msa1432410:CDS |
TCTTGTCCTCATCGGCATTA+TGG | 0.285418 | tig0027096:-10575 | None:intergenic |
CGTTCTGTTGATGGCTTTCA+AGG | 0.306759 | tig0027096:+10263 | Msa1432410:CDS |
ACCTTCCAATTCTGAGTTCA+AGG | 0.330505 | tig0027096:-7899 | None:intergenic |
CACATTTGCTCGTTGTCTAT+TGG | 0.334197 | tig0027096:-10354 | None:intergenic |
TGGAGCACATGCTAATGTTC+TGG | 0.339904 | tig0027096:-8568 | None:intergenic |
CCTCGTAGAATTCTTTATTT+GGG | 0.341457 | tig0027096:-9799 | None:intergenic |
GCAATGTGATAATATCTTCT+TGG | 0.341597 | tig0027096:-7715 | None:intergenic |
CTCAACCAATGAAGGAATAA+AGG | 0.344197 | tig0027096:-7452 | None:intergenic |
AAACTCCTTTATTCCTTCAT+TGG | 0.344487 | tig0027096:+7447 | Msa1432410:CDS |
TCTCCAACCTCTGGCTGATA+TGG | 0.345235 | tig0027096:-7640 | None:intergenic |
TCGTACACCTGAGCATTATA+CGG | 0.353665 | tig0027096:-10179 | None:intergenic |
TTACAACAAATATTCGCATT+TGG | 0.356369 | tig0027096:+7872 | Msa1432410:CDS |
GTTACTGAAGAGGCTGGATA+TGG | 0.357414 | tig0027096:+9686 | Msa1432410:CDS |
TAGCTCATTTCTCTGACAAT+TGG | 0.367715 | tig0027096:-9839 | None:intergenic |
GAAAGCCTTGAACTCAGAAT+TGG | 0.368215 | tig0027096:+7894 | Msa1432410:CDS |
CAAGATCATTGAAAGCCTTA+AGG | 0.368850 | tig0027096:+9985 | Msa1432410:CDS |
AAGAAGTTTGTTTGAGAGGC+TGG | 0.372062 | tig0027096:+9709 | Msa1432410:CDS |
CTTCAGAACAAGCAGCAATA+TGG | 0.372898 | tig0027096:-8368 | None:intergenic |
ACAAATTGCGCTAACGTCAT+AGG | 0.376474 | tig0027096:-8978 | None:intergenic |
AACATCTTTATTTCCATTTG+AGG | 0.384450 | tig0027096:+9136 | Msa1432410:CDS |
TCAGAGAAATGAGCTATAAT+AGG | 0.384938 | tig0027096:+9846 | Msa1432410:CDS |
GAGGACCCCTCAAAACAATA+TGG | 0.386964 | tig0027096:+8837 | Msa1432410:CDS |
ATTCGTGCAGACATTGCCTT+TGG | 0.389303 | tig0027096:+10469 | Msa1432410:intron |
AAAGATGAACATGATTAAAA+AGG | 0.391359 | tig0027096:+7924 | Msa1432410:CDS |
TATAATAGGTGTTTCCTTGA+AGG | 0.391736 | tig0027096:+9860 | Msa1432410:CDS |
ACTGTCAACTTTGTATTTCT+GGG | 0.392878 | tig0027096:+8340 | Msa1432410:CDS |
GTACGAACCTCTGGTATAAT+GGG | 0.394206 | tig0027096:-10920 | None:intergenic |
TTTGGTGACATAGTGATATT+CGG | 0.397749 | tig0027096:+8675 | Msa1432410:CDS |
GTTTGAGAGGCTGGTATTGT+TGG | 0.397795 | tig0027096:+9718 | Msa1432410:CDS |
CAAGCTTGTATGGCGTGAAC+CGG | 0.399208 | tig0027096:+7497 | Msa1432410:CDS |
TCCAACACTGCAGTATTAGT+TGG | 0.399230 | tig0027096:-8588 | None:intergenic |
GTTAGCAAATCAAGAGCTAT+AGG | 0.399911 | tig0027096:-9173 | None:intergenic |
TAACACAAAACTTGCTCATC+AGG | 0.408513 | tig0027096:-6693 | None:intergenic |
TTTCATCTTCCTCATATGAA+TGG | 0.412899 | tig0027096:-9013 | None:intergenic |
AGAGACACTTGCCTTCCTTA+AGG | 0.415257 | tig0027096:-10000 | None:intergenic |
TTGATGCAGTACAGAAAATC+AGG | 0.416104 | tig0027096:-9403 | None:intergenic |
GAAAGCATTCTTGACTGTCT+TGG | 0.416880 | tig0027096:+9260 | Msa1432410:CDS |
GCTGTCAATATCTCACAAAA+AGG | 0.417796 | tig0027096:-7523 | None:intergenic |
CTTCACCATGCTGTCCTCAT+AGG | 0.419533 | tig0027096:+9536 | Msa1432410:CDS |
CGAACACTAACAGAGAAGTT+TGG | 0.419784 | tig0027096:-10242 | None:intergenic |
AAACTCCGTGTCAATGCGTT+TGG | 0.424142 | tig0027096:-7788 | None:intergenic |
CTTTATTCCTTCATTGGTTG+AGG | 0.426448 | tig0027096:+7453 | Msa1432410:CDS |
TTTGAGAGGCTGGTATTGTT+GGG | 0.436525 | tig0027096:+9719 | Msa1432410:CDS |
TGGTGTATAAATTGCTCAAA+TGG | 0.439800 | tig0027096:+11211 | Msa1432410:three_prime_UTR |
GATGTTGATACATATGGCTT+TGG | 0.439847 | tig0027096:+8657 | Msa1432410:CDS |
GTTCGTACAGGGGCAGGAGC+AGG | 0.441234 | tig0027096:+10935 | Msa1432410:CDS |
CGGACACAGTTCGAAGAATA+TGG | 0.447007 | tig0027096:+9943 | Msa1432410:CDS |
TGTAGACTAAGTTTCTTGAA+TGG | 0.453167 | tig0027096:-10660 | None:intergenic |
TGCCGATGAGGACAAGAAAC+TGG | 0.454201 | tig0027096:+10581 | Msa1432410:CDS |
ACATAGTGATATTCGGCAAC+AGG | 0.457654 | tig0027096:+8682 | Msa1432410:CDS |
TTCTGTAAAGTTTGCCATTG+TGG | 0.458191 | tig0027096:+11145 | Msa1432410:three_prime_UTR |
AAACTGTCGAAGACTTAAAC+AGG | 0.464236 | tig0027096:+7692 | Msa1432410:CDS |
TTCCTTTATAAACATAGCTA+AGG | 0.464927 | tig0027096:+9901 | Msa1432410:CDS |
GATCTGTCTTCAAGCTTGTA+TGG | 0.469485 | tig0027096:+7487 | Msa1432410:CDS |
ATGGAAGAAGTTTGTTTGAG+AGG | 0.470944 | tig0027096:+9705 | Msa1432410:CDS |
TTCGCAACCAAAACTTCTGC+AGG | 0.472089 | tig0027096:+6945 | Msa1432410:CDS |
GAGCATGATGTTGATACATA+TGG | 0.472647 | tig0027096:+8651 | Msa1432410:CDS |
TGTTGGTAGGTGTGTATACA+AGG | 0.473971 | tig0027096:-9117 | None:intergenic |
CTAAAGGTTACTGAAGAGGC+TGG | 0.474648 | tig0027096:+9680 | Msa1432410:intron |
TGCATTCTCATTAGATCTCA+CGG | 0.476860 | tig0027096:-10315 | None:intergenic |
CATTACCACCTTGGTTGCCA+TGG | 0.476960 | tig0027096:-10958 | None:intergenic |
GTTTGCCATTGTGGCTGTTG+TGG | 0.477183 | tig0027096:+11154 | Msa1432410:three_prime_UTR |
GCAACCAAGGTGGTAATGGA+TGG | 0.478825 | tig0027096:+10963 | Msa1432410:exon |
CACCCCATCCATTACCACCT+TGG | 0.479620 | tig0027096:-10967 | None:intergenic |
GTTAGCGCAATTTGTGAAGA+AGG | 0.482966 | tig0027096:+8986 | Msa1432410:CDS |
AAACTTATTTGGGGCCCACC+AGG | 0.483167 | tig0027096:+8489 | Msa1432410:CDS |
GATTTGATAAAGCAGGAACT+TGG | 0.484795 | tig0027096:-7578 | None:intergenic |
AAACAAACTCTCGACGATCA+TGG | 0.485641 | tig0027096:+9230 | Msa1432410:CDS |
GATAATCAAGAAAGATATCC+TGG | 0.487670 | tig0027096:-8737 | None:intergenic |
CATGGCAACCAAGGTGGTAA+TGG | 0.488072 | tig0027096:+10959 | Msa1432410:CDS |
GAAACTGGCTGAGGCTATTG+AGG | 0.488846 | tig0027096:+10596 | Msa1432410:CDS |
TTTATTTGGGAATAAGCTGA+TGG | 0.489788 | tig0027096:-9786 | None:intergenic |
TGAAGACCTGGCAGCTGTAA+TGG | 0.493054 | tig0027096:-9518 | None:intergenic |
ATTTGGGGCCCACCAGGGAC+TGG | 0.496949 | tig0027096:+8495 | Msa1432410:CDS |
ATGTGGCACTGACTCGGGCT+AGG | 0.498446 | tig0027096:+10372 | Msa1432410:CDS |
GTTACTGTTATGAATGTATG+TGG | 0.500171 | tig0027096:-7415 | None:intergenic |
TGTGGATTAACCAAAACAAA+AGG | 0.503111 | tig0027096:-6762 | None:intergenic |
AGCCAGTTTCTTGTCCTCAT+CGG | 0.503543 | tig0027096:-10583 | None:intergenic |
ATTCATTCAGATTCTCAGAC+TGG | 0.504869 | tig0027096:-8404 | None:intergenic |
TCTTGATCTTGCAAGTTTGG+TGG | 0.508242 | tig0027096:+6892 | Msa1432410:CDS |
GCAATGAGATCTCCAACCTC+TGG | 0.511081 | tig0027096:-7649 | None:intergenic |
GCCATTCCATTACAGCTGCC+AGG | 0.511787 | tig0027096:+9512 | Msa1432410:CDS |
GAAAGATATCCTGGAGGCAT+CGG | 0.513481 | tig0027096:-8728 | None:intergenic |
AGCAAATGTGGCACTGACTC+GGG | 0.513680 | tig0027096:+10367 | Msa1432410:CDS |
CATATCTCCGTATAATGCTC+AGG | 0.515178 | tig0027096:+10172 | Msa1432410:CDS |
TGAGTTTCCTCAACCAATGA+AGG | 0.515450 | tig0027096:-7460 | None:intergenic |
AATGAAGATCATGTAAGATA+CGG | 0.515812 | tig0027096:+11007 | Msa1432410:three_prime_UTR |
AGATAGACAGCATAAAGCTC+TGG | 0.517857 | tig0027096:-7841 | None:intergenic |
GAGCAAATGTGGCACTGACT+CGG | 0.518069 | tig0027096:+10366 | Msa1432410:CDS |
CCAGAGGTTCGTACAGGGGC+AGG | 0.521311 | tig0027096:+10929 | Msa1432410:CDS |
CAAACTGCTGTATCAAGCCT+TGG | 0.526218 | tig0027096:-11039 | None:intergenic |
GTACTTGACGCAAAGGAAAG+AGG | 0.527029 | tig0027096:+10546 | Msa1432410:CDS |
TCAAATGGAAATAAAGATGT+TGG | 0.529296 | tig0027096:-9134 | None:intergenic |
TTTGGGAATAAGCTGATGGA+TGG | 0.530533 | tig0027096:-9782 | None:intergenic |
ATTATACCAGAGGTTCGTAC+AGG | 0.530630 | tig0027096:+10923 | Msa1432410:CDS |
TAATGTTTCCATCCAGTGGT+TGG | 0.531073 | tig0027096:-8789 | None:intergenic |
GGTAAAGAACAACGAGGTCG+CGG | 0.536260 | tig0027096:+9923 | Msa1432410:CDS |
GTCGAGAGTTTGTTTCAACT+TGG | 0.537065 | tig0027096:-9222 | None:intergenic |
TCTTCATTGAAAATGGTACT+TGG | 0.538942 | tig0027096:-10992 | None:intergenic |
TCTAATGAGAATGCAAAAGT+AGG | 0.540283 | tig0027096:+10323 | Msa1432410:CDS |
CAACAGGTCTCGAATGAAAG+TGG | 0.540744 | tig0027096:+8698 | Msa1432410:CDS |
AAGCTTGTATGGCGTGAACC+GGG | 0.542583 | tig0027096:+7498 | Msa1432410:CDS |
GTTCCTGCTTTATCAAATCT+CGG | 0.542665 | tig0027096:+7582 | Msa1432410:CDS |
AAGAATGATACAAAAGATGT+AGG | 0.542999 | tig0027096:+7616 | Msa1432410:CDS |
ATCAATGATTACATTGCTTG+AGG | 0.544803 | tig0027096:+8818 | Msa1432410:CDS |
GGACAGTTACCGATGCCTCC+AGG | 0.545568 | tig0027096:+8719 | Msa1432410:CDS |
AACTTATTTGGGGCCCACCA+GGG | 0.546902 | tig0027096:+8490 | Msa1432410:CDS |
GAAGGAATACCATTCATATG+AGG | 0.547439 | tig0027096:+9004 | Msa1432410:CDS |
TAAGTAATGTTTCCATCCAG+TGG | 0.547807 | tig0027096:-8793 | None:intergenic |
GGACCATATCAGCCAGAGGT+TGG | 0.550720 | tig0027096:+7637 | Msa1432410:CDS |
AGTTTAACTCTAATTACTTG+AGG | 0.551377 | tig0027096:+7806 | Msa1432410:CDS |
ACATAATTTCAGCTCCGCTA+CGG | 0.551605 | tig0027096:-9087 | None:intergenic |
ATCTTCTTAATACTCAGTAT+AGG | 0.554124 | tig0027096:+9753 | Msa1432410:CDS |
GAAGTGATCTTAGTAAGCAA+AGG | 0.554639 | tig0027096:-9310 | None:intergenic |
CAGATTCTCAGACTGGATCA+TGG | 0.555889 | tig0027096:-8397 | None:intergenic |
ACAGGGGCAGGAGCAGGCCA+TGG | 0.557807 | tig0027096:+10941 | Msa1432410:CDS |
TTTCATTTCCTAATATCCAA+AGG | 0.561731 | tig0027096:-10485 | None:intergenic |
CCAAAACTTCTGCAGGGACA+AGG | 0.561795 | tig0027096:+6952 | Msa1432410:CDS |
CTGTCAACTTTGTATTTCTG+GGG | 0.562848 | tig0027096:+8341 | Msa1432410:CDS |
CAACCAAGGTGGTAATGGAT+GGG | 0.563720 | tig0027096:+10964 | Msa1432410:exon |
TTTAAGCTGTGTTTCCATGA+GGG | 0.566522 | tig0027096:+8443 | Msa1432410:CDS |
TCACCGAGATTTGATAAAGC+AGG | 0.567190 | tig0027096:-7585 | None:intergenic |
GCATTCTTGACTGTCTTGGA+AGG | 0.567215 | tig0027096:+9264 | Msa1432410:CDS |
GTCTTCCAAACGCATTGACA+CGG | 0.567312 | tig0027096:+7783 | Msa1432410:CDS |
ATGGAAATAAAGATGTTGGT+AGG | 0.567708 | tig0027096:-9130 | None:intergenic |
AGACATTTGCAACAACCTCC+AGG | 0.569976 | tig0027096:+10694 | Msa1432410:CDS |
AAATCTAAAGGTTACTGAAG+AGG | 0.570097 | tig0027096:+9676 | Msa1432410:intron |
TCGGTATTGCAAGGACGACA+TGG | 0.570447 | tig0027096:+11080 | Msa1432410:three_prime_UTR |
TCCAACTAATACTGCAGTGT+TGG | 0.576731 | tig0027096:+8587 | Msa1432410:CDS |
GGAGCAGGCCATGGCAACCA+AGG | 0.577030 | tig0027096:+10950 | Msa1432410:CDS |
TCCTTTATAAACATAGCTAA+GGG | 0.577485 | tig0027096:+9902 | Msa1432410:CDS |
TAATACTGCAGTGTTGGAAG+TGG | 0.577647 | tig0027096:+8593 | Msa1432410:CDS |
TATGAAACCTCGGTATTGCA+AGG | 0.578658 | tig0027096:+11071 | Msa1432410:three_prime_UTR |
ACAAGGAAGAAAGTTAGCAT+AGG | 0.580771 | tig0027096:+10146 | Msa1432410:CDS |
TTTCAACTTGGCTTTACACA+TGG | 0.583103 | tig0027096:-9210 | None:intergenic |
GACACTATTAAACTTATTTG+GGG | 0.583248 | tig0027096:+8480 | Msa1432410:CDS |
GGATCAGAAATAGAATCGCT+CGG | 0.584635 | tig0027096:-10221 | None:intergenic |
TACTTGACGCAAAGGAAAGA+GGG | 0.587734 | tig0027096:+10547 | Msa1432410:CDS |
CTTGAGCAGGGAAAATAACA+AGG | 0.588111 | tig0027096:-8538 | None:intergenic |
ATCATTGAAAGCCTTAAGGA+AGG | 0.592650 | tig0027096:+9989 | Msa1432410:CDS |
AGAACTAGTACTTGACGCAA+AGG | 0.595711 | tig0027096:+10539 | Msa1432410:CDS |
ACCTGGCAGCTGTAATGGAA+TGG | 0.596226 | tig0027096:-9513 | None:intergenic |
ACTATGATGACATTCCCTCA+TGG | 0.597088 | tig0027096:-8457 | None:intergenic |
CAGTTCGAAGAATATGGTCG+AGG | 0.600198 | tig0027096:+9949 | Msa1432410:CDS |
TCCTGCAGTGGTCAAAAGCA+CGG | 0.600535 | tig0027096:+9574 | Msa1432410:CDS |
AGGACAGCATGGTGAAGACC+TGG | 0.603597 | tig0027096:-9530 | None:intergenic |
TAAATCCACAACAGCCACAA+TGG | 0.606884 | tig0027096:-11159 | None:intergenic |
AACCAAGGTGGTAATGGATG+GGG | 0.609504 | tig0027096:+10965 | Msa1432410:exon |
TTATACCAGAGGTTCGTACA+GGG | 0.609690 | tig0027096:+10924 | Msa1432410:CDS |
AAGGAATTCAATCTCAAGCA+AGG | 0.610079 | tig0027096:-10622 | None:intergenic |
CAATAGACAACGAGCAAATG+TGG | 0.611367 | tig0027096:+10355 | Msa1432410:CDS |
TATGGATCAAAAGAAAGTAG+TGG | 0.617134 | tig0027096:+7745 | Msa1432410:CDS |
TGAGGACAAGAAACTGGCTG+AGG | 0.618521 | tig0027096:+10587 | Msa1432410:CDS |
TTACTGTTATGAATGTATGT+GGG | 0.625285 | tig0027096:-7414 | None:intergenic |
TAATTTCAGCTCCGCTACGG+TGG | 0.633548 | tig0027096:-9084 | None:intergenic |
ATGGTGATTCAGATTCGTCA+AGG | 0.637086 | tig0027096:-10641 | None:intergenic |
TCTGTTGATGGCTTTCAAGG+CGG | 0.640258 | tig0027096:+10266 | Msa1432410:CDS |
ACTCTCGACGATCATGGAGA+CGG | 0.645061 | tig0027096:+9236 | Msa1432410:CDS |
AGAGGTTCAATGTATACAAG+AGG | 0.645432 | tig0027096:+10895 | Msa1432410:intron |
CTATGAAACAAACTATACAA+TGG | 0.647003 | tig0027096:+6666 | Msa1432410:five_prime_UTR |
GTTGTCTCTCATCACCTATG+AGG | 0.647732 | tig0027096:-9550 | None:intergenic |
CGGTATTGCAAGGACGACAT+GGG | 0.648551 | tig0027096:+11081 | Msa1432410:three_prime_UTR |
CATCACCTATGAGGACAGCA+TGG | 0.649224 | tig0027096:-9541 | None:intergenic |
TGAGAGACAACTTCCTGCAG+TGG | 0.650250 | tig0027096:+9562 | Msa1432410:CDS |
AGAGGTTCCCATTATACCAG+AGG | 0.651748 | tig0027096:+10913 | Msa1432410:CDS |
GCAGGCCATGGCAACCAAGG+TGG | 0.660656 | tig0027096:+10953 | Msa1432410:CDS |
GTTGCCATAATATGAAACCT+CGG | 0.663407 | tig0027096:+11061 | Msa1432410:three_prime_UTR |
ATGTCGTCCTTGCAATACCG+AGG | 0.667401 | tig0027096:-11078 | None:intergenic |
TGGAAGGTTAAACAACACAA+TGG | 0.668521 | tig0027096:+9280 | Msa1432410:CDS |
GTGTTTCCATAATGCCGATG+AGG | 0.669535 | tig0027096:+10569 | Msa1432410:CDS |
TGTCATTAGAACAATTTACA+CGG | 0.679928 | tig0027096:+8892 | Msa1432410:CDS |
TATACCAGAGGTTCGTACAG+GGG | 0.682607 | tig0027096:+10925 | Msa1432410:CDS |
GAGATTCAGTTCCACCGTAG+CGG | 0.687642 | tig0027096:+9073 | Msa1432410:CDS |
TCGCAACCAAAACTTCTGCA+GGG | 0.690456 | tig0027096:+6946 | Msa1432410:CDS |
GCCTTGAACTCAGAATTGGA+AGG | 0.690714 | tig0027096:+7898 | Msa1432410:CDS |
GACTGGCAAAACAAAGACAG+TGG | 0.695753 | tig0027096:+8512 | Msa1432410:CDS |
AGATACGGTTGCTAACTCCA+AGG | 0.698412 | tig0027096:+11022 | Msa1432410:three_prime_UTR |
CCCAAATAAAGAATTCTACG+AGG | 0.713544 | tig0027096:+9799 | Msa1432410:CDS |
TGTAGGACCATATCAGCCAG+AGG | 0.714082 | tig0027096:+7633 | Msa1432410:CDS |
AATCAAGAAAGATATCCTGG+AGG | 0.754236 | tig0027096:-8734 | None:intergenic |
GCTAAGGGTAAAGAACAACG+AGG | 0.845741 | tig0027096:+9917 | Msa1432410:CDS |
ATTCTCATTAGATCTCACGG+TGG | 0.856552 | tig0027096:-10312 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTCTATGAAAAATTTAATAT+TGG | - | tig0027096:8055-8074 | None:intergenic | 10.0% |
!! | ACTTTATGTAAGAAAAAATT+CGG | + | tig0027096:7042-7061 | Msa1432410:intron | 15.0% |
!!! | TCAATAACTAGAAATTTTAT+CGG | - | tig0027096:9461-9480 | None:intergenic | 15.0% |
!! | AAGAAAATATTCTTAAATGA+TGG | - | tig0027096:9639-9658 | None:intergenic | 15.0% |
!! | ATTATAACTATCAAATCTAA+AGG | + | tig0027096:9664-9683 | Msa1432410:intron | 15.0% |
!!! | TTTGTCAAACTATTATTTTA+TGG | + | tig0027096:11191-11210 | Msa1432410:three_prime_UTR | 15.0% |
!!! | ACATTGTTGATAAAAAAAAG+TGG | + | tig0027096:6813-6832 | Msa1432410:five_prime_UTR | 20.0% |
!! | ATAAAGAGAATACATGAATT+TGG | - | tig0027096:7069-7088 | None:intergenic | 20.0% |
!! | AGTACATTAAATTTATGATG+CGG | - | tig0027096:7150-7169 | None:intergenic | 20.0% |
!! | CATCATAAATTTAATGTACT+TGG | + | tig0027096:7150-7169 | Msa1432410:intron | 20.0% |
!! | AACATTATTGTTTATATCTC+AGG | + | tig0027096:7381-7400 | Msa1432410:intron | 20.0% |
!! | AAAGATGAACATGATTAAAA+AGG | + | tig0027096:7924-7943 | Msa1432410:CDS | 20.0% |
!! | TGACACTATTAAACTTATTT+GGG | + | tig0027096:8479-8498 | Msa1432410:CDS | 20.0% |
!!! | TTTTTGTTACAGAATTTTGT+AGG | + | tig0027096:10123-10142 | Msa1432410:CDS | 20.0% |
!! | TAGAAAAAAGTGATTCTATA+TGG | + | tig0027096:10514-10533 | Msa1432410:CDS | 20.0% |
!! | ATTATAAATTCGTATACTAG+AGG | + | tig0027096:10877-10896 | Msa1432410:intron | 20.0% |
!! | TAGAAACTTAAAAAAAACGT+GGG | - | tig0027096:11116-11135 | None:intergenic | 20.0% |
!! | TTAGAAACTTAAAAAAAACG+TGG | - | tig0027096:11117-11136 | None:intergenic | 20.0% |
! | CTATGAAACAAACTATACAA+TGG | + | tig0027096:6666-6685 | Msa1432410:five_prime_UTR | 25.0% |
! | AAAAAAAAGTGGTCATAGAA+AGG | + | tig0027096:6824-6843 | Msa1432410:five_prime_UTR | 25.0% |
!! | CAAGGTTTTTCTTTTTTTTC+AGG | + | tig0027096:6970-6989 | Msa1432410:intron | 25.0% |
!!! | CTATAGAAGCATATTTGTTT+TGG | - | tig0027096:7124-7143 | None:intergenic | 25.0% |
!! | AACTACAAGAATTTTACTAG+AGG | - | tig0027096:7203-7222 | None:intergenic | 25.0% |
! | ATTATTGTTTATATCTCAGG+TGG | + | tig0027096:7384-7403 | Msa1432410:intron | 25.0% |
! | TTACTGTTATGAATGTATGT+GGG | - | tig0027096:7417-7436 | None:intergenic | 25.0% |
! | AAGAATGATACAAAAGATGT+AGG | + | tig0027096:7616-7635 | Msa1432410:CDS | 25.0% |
! | TATCACATTGCTTATGTTTA+TGG | + | tig0027096:7727-7746 | Msa1432410:CDS | 25.0% |
! | AGTTTAACTCTAATTACTTG+AGG | + | tig0027096:7806-7825 | Msa1432410:CDS | 25.0% |
! | TTACAACAAATATTCGCATT+TGG | + | tig0027096:7872-7891 | Msa1432410:CDS | 25.0% |
!! | TATTTCTAACAACACTCATT+AGG | - | tig0027096:7987-8006 | None:intergenic | 25.0% |
!!! | ATTTTAATCCAGCTTTTCAA+GGG | - | tig0027096:8209-8228 | None:intergenic | 25.0% |
!!! | AATTTTAATCCAGCTTTTCA+AGG | - | tig0027096:8210-8229 | None:intergenic | 25.0% |
!! | TTACTTTGTATTTTGCAGAA+CGG | + | tig0027096:8312-8331 | Msa1432410:intron | 25.0% |
! | GTGACACTATTAAACTTATT+TGG | + | tig0027096:8478-8497 | Msa1432410:CDS | 25.0% |
! | GACACTATTAAACTTATTTG+GGG | + | tig0027096:8480-8499 | Msa1432410:CDS | 25.0% |
!!! | TACAAACCATATTGTTTTGA+GGG | - | tig0027096:8846-8865 | None:intergenic | 25.0% |
!!! | ATACAAACCATATTGTTTTG+AGG | - | tig0027096:8847-8866 | None:intergenic | 25.0% |
! | TGTCATTAGAACAATTTACA+CGG | + | tig0027096:8892-8911 | Msa1432410:CDS | 25.0% |
! | TCAAATGGAAATAAAGATGT+TGG | - | tig0027096:9137-9156 | None:intergenic | 25.0% |
!! | AACATCTTTATTTCCATTTG+AGG | + | tig0027096:9136-9155 | Msa1432410:CDS | 25.0% |
!!! | CCATATTTTTCAGTTATGTT+TGG | - | tig0027096:9353-9372 | None:intergenic | 25.0% |
! | CCAAACATAACTGAAAAATA+TGG | + | tig0027096:9350-9369 | Msa1432410:CDS | 25.0% |
! | ATCTTCTTAATACTCAGTAT+AGG | + | tig0027096:9753-9772 | Msa1432410:CDS | 25.0% |
! | TTCCTTTATAAACATAGCTA+AGG | + | tig0027096:9901-9920 | Msa1432410:CDS | 25.0% |
! | TCCTTTATAAACATAGCTAA+GGG | + | tig0027096:9902-9921 | Msa1432410:CDS | 25.0% |
!! | AATAAGAAAGCTTCTTCTTT+TGG | + | tig0027096:10086-10105 | Msa1432410:intron | 25.0% |
! | TTTCATTTCCTAATATCCAA+AGG | - | tig0027096:10488-10507 | None:intergenic | 25.0% |
! | TACATGATCTTCATTGAAAA+TGG | - | tig0027096:11002-11021 | None:intergenic | 25.0% |
! | AATGAAGATCATGTAAGATA+CGG | + | tig0027096:11007-11026 | Msa1432410:three_prime_UTR | 25.0% |
!! | ATATGTCTGTCCTTTTGTTT+TGG | + | tig0027096:6752-6771 | Msa1432410:five_prime_UTR | 30.0% |
! | TGTGGATTAACCAAAACAAA+AGG | - | tig0027096:6765-6784 | None:intergenic | 30.0% |
! | CTTCTTTTTATACATGTGTG+TGG | - | tig0027096:6783-6802 | None:intergenic | 30.0% |
!! | GAGTTTTAATGTTAAGAGAG+AGG | + | tig0027096:6865-6884 | Msa1432410:CDS | 30.0% |
! | TTTTAATGTTAAGAGAGAGG+AGG | + | tig0027096:6868-6887 | Msa1432410:CDS | 30.0% |
! | TGGTGGAAATTGTATTTTCT+TGG | + | tig0027096:6909-6928 | Msa1432410:CDS | 30.0% |
! | ATTTTACTAGAGGAGATTGA+GGG | - | tig0027096:7193-7212 | None:intergenic | 30.0% |
! | AATTTTACTAGAGGAGATTG+AGG | - | tig0027096:7194-7213 | None:intergenic | 30.0% |
TAGCATTAAATCAATCCAGA+CGG | + | tig0027096:7255-7274 | Msa1432410:intron | 30.0% | |
! | TTTGATAAAGTGTCTTCAGA+GGG | - | tig0027096:7348-7367 | None:intergenic | 30.0% |
!! | TTTTGATAAAGTGTCTTCAG+AGG | - | tig0027096:7349-7368 | None:intergenic | 30.0% |
GTTACTGTTATGAATGTATG+TGG | - | tig0027096:7418-7437 | None:intergenic | 30.0% | |
AAACTCCTTTATTCCTTCAT+TGG | + | tig0027096:7447-7466 | Msa1432410:CDS | 30.0% | |
! | TTTAAGTCTTCGACAGTTTT+CGG | - | tig0027096:7691-7710 | None:intergenic | 30.0% |
GCAATGTGATAATATCTTCT+TGG | - | tig0027096:7718-7737 | None:intergenic | 30.0% | |
TATGGATCAAAAGAAAGTAG+TGG | + | tig0027096:7745-7764 | Msa1432410:CDS | 30.0% | |
GTGTAAAGGATCATATGATA+TGG | - | tig0027096:8118-8137 | None:intergenic | 30.0% | |
ATCTGAATTTATAGCTGCAA+AGG | + | tig0027096:8254-8273 | Msa1432410:intron | 30.0% | |
ACTGTCAACTTTGTATTTCT+GGG | + | tig0027096:8340-8359 | Msa1432410:CDS | 30.0% | |
! | GCTTAAAACTGCATCTTTTT+GGG | - | tig0027096:8430-8449 | None:intergenic | 30.0% |
! | AGCTTAAAACTGCATCTTTT+TGG | - | tig0027096:8431-8450 | None:intergenic | 30.0% |
! | TTTGGTGACATAGTGATATT+CGG | + | tig0027096:8675-8694 | Msa1432410:CDS | 30.0% |
GATAATCAAGAAAGATATCC+TGG | - | tig0027096:8740-8759 | None:intergenic | 30.0% | |
ATCAATGATTACATTGCTTG+AGG | + | tig0027096:8818-8837 | Msa1432410:CDS | 30.0% | |
!!! | ACAAACCATATTGTTTTGAG+GGG | - | tig0027096:8845-8864 | None:intergenic | 30.0% |
TATAAGCTTGATGCAGAAAA+TGG | + | tig0027096:8864-8883 | Msa1432410:CDS | 30.0% | |
TTTCATCTTCCTCATATGAA+TGG | - | tig0027096:9016-9035 | None:intergenic | 30.0% | |
ATGGAAATAAAGATGTTGGT+AGG | - | tig0027096:9133-9152 | None:intergenic | 30.0% | |
! | ATTTTCTTCATCTCCTCAAA+TGG | - | tig0027096:9152-9171 | None:intergenic | 30.0% |
ATCCAAATCGCAAAAAATGA+CGG | - | tig0027096:9611-9630 | None:intergenic | 30.0% | |
AAATCTAAAGGTTACTGAAG+AGG | + | tig0027096:9676-9695 | Msa1432410:intron | 30.0% | |
TTTATTTGGGAATAAGCTGA+TGG | - | tig0027096:9789-9808 | None:intergenic | 30.0% | |
! | CCTCGTAGAATTCTTTATTT+GGG | - | tig0027096:9802-9821 | None:intergenic | 30.0% |
TCCTCGTAGAATTCTTTATT+TGG | - | tig0027096:9803-9822 | None:intergenic | 30.0% | |
TCAGAGAAATGAGCTATAAT+AGG | + | tig0027096:9846-9865 | Msa1432410:CDS | 30.0% | |
TATAATAGGTGTTTCCTTGA+AGG | + | tig0027096:9860-9879 | Msa1432410:CDS | 30.0% | |
! | AAGCATACATTTTTCCTTCA+AGG | - | tig0027096:9877-9896 | None:intergenic | 30.0% |
ACCCTTAGCTATGTTTATAA+AGG | - | tig0027096:9906-9925 | None:intergenic | 30.0% | |
TGTCTATGTATATGTGTTAG+TGG | + | tig0027096:10039-10058 | Msa1432410:intron | 30.0% | |
! | TTACAGAATTTTGTAGGACA+AGG | + | tig0027096:10129-10148 | Msa1432410:CDS | 30.0% |
TCTAATGAGAATGCAAAAGT+AGG | + | tig0027096:10323-10342 | Msa1432410:CDS | 30.0% | |
ACATAAGCTCATAGTAAAGT+TGG | + | tig0027096:10444-10463 | Msa1432410:intron | 30.0% | |
TGTAGACTAAGTTTCTTGAA+TGG | - | tig0027096:10663-10682 | None:intergenic | 30.0% | |
TCCTAGTGTGTACATTATAA+CGG | + | tig0027096:10834-10853 | Msa1432410:intron | 30.0% | |
TCTTCATTGAAAATGGTACT+TGG | - | tig0027096:10995-11014 | None:intergenic | 30.0% | |
AATACCGAGGTTTCATATTA+TGG | - | tig0027096:11068-11087 | None:intergenic | 30.0% | |
ACTTAAAAAAAACGTGGGAT+TGG | - | tig0027096:11111-11130 | None:intergenic | 30.0% | |
TGGTGTATAAATTGCTCAAA+TGG | + | tig0027096:11211-11230 | Msa1432410:three_prime_UTR | 30.0% | |
! | TAACACAAAACTTGCTCATC+AGG | - | tig0027096:6696-6715 | None:intergenic | 35.0% |
CTCAACCAATGAAGGAATAA+AGG | - | tig0027096:7455-7474 | None:intergenic | 35.0% | |
! | CTTTATTCCTTCATTGGTTG+AGG | + | tig0027096:7453-7472 | Msa1432410:CDS | 35.0% |
GCTGTCAATATCTCACAAAA+AGG | - | tig0027096:7526-7545 | None:intergenic | 35.0% | |
! | CTTGGATGATATGAAGCTTT+TGG | - | tig0027096:7563-7582 | None:intergenic | 35.0% |
GATTTGATAAAGCAGGAACT+TGG | - | tig0027096:7581-7600 | None:intergenic | 35.0% | |
GTTCCTGCTTTATCAAATCT+CGG | + | tig0027096:7582-7601 | Msa1432410:CDS | 35.0% | |
AAACTGTCGAAGACTTAAAC+AGG | + | tig0027096:7692-7711 | Msa1432410:CDS | 35.0% | |
GGATCATATGATATGGTATC+AGG | - | tig0027096:8111-8130 | None:intergenic | 35.0% | |
TAATTGAACCCTTGAAAAGC+TGG | + | tig0027096:8198-8217 | Msa1432410:intron | 35.0% | |
GACTGTCAACTTTGTATTTC+TGG | + | tig0027096:8339-8358 | Msa1432410:CDS | 35.0% | |
! | CTGTCAACTTTGTATTTCTG+GGG | + | tig0027096:8341-8360 | Msa1432410:CDS | 35.0% |
ATTCATTCAGATTCTCAGAC+TGG | - | tig0027096:8407-8426 | None:intergenic | 35.0% | |
! | TTTTAAGCTGTGTTTCCATG+AGG | + | tig0027096:8442-8461 | Msa1432410:CDS | 35.0% |
TTTAAGCTGTGTTTCCATGA+GGG | + | tig0027096:8443-8462 | Msa1432410:CDS | 35.0% | |
!!! | TCTGGTTTTAAACTTGAGCA+GGG | - | tig0027096:8553-8572 | None:intergenic | 35.0% |
!!! | TTCTGGTTTTAAACTTGAGC+AGG | - | tig0027096:8554-8573 | None:intergenic | 35.0% |
GAGCATGATGTTGATACATA+TGG | + | tig0027096:8651-8670 | Msa1432410:CDS | 35.0% | |
GATGTTGATACATATGGCTT+TGG | + | tig0027096:8657-8676 | Msa1432410:CDS | 35.0% | |
AATCAAGAAAGATATCCTGG+AGG | - | tig0027096:8737-8756 | None:intergenic | 35.0% | |
! | ATCGCGTAAGTAATCTTTTG+AGG | + | tig0027096:8757-8776 | Msa1432410:CDS | 35.0% |
TAAGTAATGTTTCCATCCAG+TGG | - | tig0027096:8796-8815 | None:intergenic | 35.0% | |
GAAGGAATACCATTCATATG+AGG | + | tig0027096:9004-9023 | Msa1432410:CDS | 35.0% | |
GTTAGCAAATCAAGAGCTAT+AGG | - | tig0027096:9176-9195 | None:intergenic | 35.0% | |
!! | TTTCAACTTGGCTTTACACA+TGG | - | tig0027096:9213-9232 | None:intergenic | 35.0% |
TGGAAGGTTAAACAACACAA+TGG | + | tig0027096:9280-9299 | Msa1432410:CDS | 35.0% | |
GAAGTGATCTTAGTAAGCAA+AGG | - | tig0027096:9313-9332 | None:intergenic | 35.0% | |
TTGATGCAGTACAGAAAATC+AGG | - | tig0027096:9406-9425 | None:intergenic | 35.0% | |
! | TCTACTAGACTTTTCACAGA+AGG | + | tig0027096:9428-9447 | Msa1432410:CDS | 35.0% |
!!! | TTCCGTCATTTTTTGCGATT+TGG | + | tig0027096:9606-9625 | Msa1432410:intron | 35.0% |
! | ATGGAAGAAGTTTGTTTGAG+AGG | + | tig0027096:9705-9724 | Msa1432410:CDS | 35.0% |
CCCAAATAAAGAATTCTACG+AGG | + | tig0027096:9799-9818 | Msa1432410:CDS | 35.0% | |
TAGCTCATTTCTCTGACAAT+TGG | - | tig0027096:9842-9861 | None:intergenic | 35.0% | |
CTTAAGGCTTTCAATGATCT+TGG | - | tig0027096:9987-10006 | None:intergenic | 35.0% | |
CAAGATCATTGAAAGCCTTA+AGG | + | tig0027096:9985-10004 | Msa1432410:CDS | 35.0% | |
ATCATTGAAAGCCTTAAGGA+AGG | + | tig0027096:9989-10008 | Msa1432410:CDS | 35.0% | |
ACAAGGAAGAAAGTTAGCAT+AGG | + | tig0027096:10146-10165 | Msa1432410:CDS | 35.0% | |
TGCATTCTCATTAGATCTCA+CGG | - | tig0027096:10318-10337 | None:intergenic | 35.0% | |
TGAGCTTATGTATCAGAACT+TGG | - | tig0027096:10435-10454 | None:intergenic | 35.0% | |
AGACATTGCCTTTGGATATT+AGG | + | tig0027096:10477-10496 | Msa1432410:intron | 35.0% | |
AAGGAATTCAATCTCAAGCA+AGG | - | tig0027096:10625-10644 | None:intergenic | 35.0% | |
AGAGGTTCAATGTATACAAG+AGG | + | tig0027096:10895-10914 | Msa1432410:intron | 35.0% | |
GTTGCCATAATATGAAACCT+CGG | + | tig0027096:11061-11080 | Msa1432410:three_prime_UTR | 35.0% | |
TTCTGTAAAGTTTGCCATTG+TGG | + | tig0027096:11145-11164 | Msa1432410:three_prime_UTR | 35.0% | |
GGATCTTGATCTTGCAAGTT+TGG | + | tig0027096:6889-6908 | Msa1432410:CDS | 40.0% | |
TCTTGATCTTGCAAGTTTGG+TGG | + | tig0027096:6892-6911 | Msa1432410:CDS | 40.0% | |
TGAGTTTCCTCAACCAATGA+AGG | - | tig0027096:7463-7482 | None:intergenic | 40.0% | |
GATCTGTCTTCAAGCTTGTA+TGG | + | tig0027096:7487-7506 | Msa1432410:CDS | 40.0% | |
ATATCTCACAAAAAGGAGCC+CGG | - | tig0027096:7519-7538 | None:intergenic | 40.0% | |
TCACCGAGATTTGATAAAGC+AGG | - | tig0027096:7588-7607 | None:intergenic | 40.0% | |
AGATAGACAGCATAAAGCTC+TGG | - | tig0027096:7844-7863 | None:intergenic | 40.0% | |
GAAAGCCTTGAACTCAGAAT+TGG | + | tig0027096:7894-7913 | Msa1432410:CDS | 40.0% | |
ACCTTCCAATTCTGAGTTCA+AGG | - | tig0027096:7902-7921 | None:intergenic | 40.0% | |
ACTAGAGCTTAGGTGTGTAA+AGG | - | tig0027096:8132-8151 | None:intergenic | 40.0% | |
AAGATTCGTCACTAGAGCTT+AGG | - | tig0027096:8142-8161 | None:intergenic | 40.0% | |
CTTCAGAACAAGCAGCAATA+TGG | - | tig0027096:8371-8390 | None:intergenic | 40.0% | |
ACTATGATGACATTCCCTCA+TGG | - | tig0027096:8460-8479 | None:intergenic | 40.0% | |
CTTGAGCAGGGAAAATAACA+AGG | - | tig0027096:8541-8560 | None:intergenic | 40.0% | |
TCCAACTAATACTGCAGTGT+TGG | + | tig0027096:8587-8606 | Msa1432410:CDS | 40.0% | |
TCCAACACTGCAGTATTAGT+TGG | - | tig0027096:8591-8610 | None:intergenic | 40.0% | |
! | TAATACTGCAGTGTTGGAAG+TGG | + | tig0027096:8593-8612 | Msa1432410:CDS | 40.0% |
ACATAGTGATATTCGGCAAC+AGG | + | tig0027096:8682-8701 | Msa1432410:CDS | 40.0% | |
TAATGTTTCCATCCAGTGGT+TGG | - | tig0027096:8792-8811 | None:intergenic | 40.0% | |
ACAAATTGCGCTAACGTCAT+AGG | - | tig0027096:8981-9000 | None:intergenic | 40.0% | |
GTTAGCGCAATTTGTGAAGA+AGG | + | tig0027096:8986-9005 | Msa1432410:CDS | 40.0% | |
ACATAATTTCAGCTCCGCTA+CGG | - | tig0027096:9090-9109 | None:intergenic | 40.0% | |
! | TGTTGGTAGGTGTGTATACA+AGG | - | tig0027096:9120-9139 | None:intergenic | 40.0% |
! | GTCGAGAGTTTGTTTCAACT+TGG | - | tig0027096:9225-9244 | None:intergenic | 40.0% |
AAACAAACTCTCGACGATCA+TGG | + | tig0027096:9230-9249 | Msa1432410:CDS | 40.0% | |
!! | GAAAGCATTCTTGACTGTCT+TGG | + | tig0027096:9260-9279 | Msa1432410:CDS | 40.0% |
! | AAGAAGTTTGTTTGAGAGGC+TGG | + | tig0027096:9709-9728 | Msa1432410:CDS | 40.0% |
TTTGAGAGGCTGGTATTGTT+GGG | + | tig0027096:9719-9738 | Msa1432410:CDS | 40.0% | |
TTTGGGAATAAGCTGATGGA+TGG | - | tig0027096:9785-9804 | None:intergenic | 40.0% | |
CATATCTCCGTATAATGCTC+AGG | + | tig0027096:10172-10191 | Msa1432410:CDS | 40.0% | |
TCGTACACCTGAGCATTATA+CGG | - | tig0027096:10182-10201 | None:intergenic | 40.0% | |
!!! | CGCTCGGCTTTATTTTTTCT+TGG | - | tig0027096:10208-10227 | None:intergenic | 40.0% |
GGATCAGAAATAGAATCGCT+CGG | - | tig0027096:10224-10243 | None:intergenic | 40.0% | |
CGAACACTAACAGAGAAGTT+TGG | - | tig0027096:10245-10264 | None:intergenic | 40.0% | |
GTTAGTGTTCGTTCTGTTGA+TGG | + | tig0027096:10254-10273 | Msa1432410:CDS | 40.0% | |
ATTCTCATTAGATCTCACGG+TGG | - | tig0027096:10315-10334 | None:intergenic | 40.0% | |
CACATTTGCTCGTTGTCTAT+TGG | - | tig0027096:10357-10376 | None:intergenic | 40.0% | |
CAATAGACAACGAGCAAATG+TGG | + | tig0027096:10355-10374 | Msa1432410:CDS | 40.0% | |
AGAACTAGTACTTGACGCAA+AGG | + | tig0027096:10539-10558 | Msa1432410:CDS | 40.0% | |
TACTTGACGCAAAGGAAAGA+GGG | + | tig0027096:10547-10566 | Msa1432410:CDS | 40.0% | |
ATGGTGATTCAGATTCGTCA+AGG | - | tig0027096:10644-10663 | None:intergenic | 40.0% | |
GCCGTTATAATGTACACACT+AGG | - | tig0027096:10838-10857 | None:intergenic | 40.0% | |
GTACGAACCTCTGGTATAAT+GGG | - | tig0027096:10923-10942 | None:intergenic | 40.0% | |
TGTACGAACCTCTGGTATAA+TGG | - | tig0027096:10924-10943 | None:intergenic | 40.0% | |
ATTATACCAGAGGTTCGTAC+AGG | + | tig0027096:10923-10942 | Msa1432410:CDS | 40.0% | |
TTATACCAGAGGTTCGTACA+GGG | + | tig0027096:10924-10943 | Msa1432410:CDS | 40.0% | |
TATGAAACCTCGGTATTGCA+AGG | + | tig0027096:11071-11090 | Msa1432410:three_prime_UTR | 40.0% | |
TAAATCCACAACAGCCACAA+TGG | - | tig0027096:11162-11181 | None:intergenic | 40.0% | |
TTCGCAACCAAAACTTCTGC+AGG | + | tig0027096:6945-6964 | Msa1432410:CDS | 45.0% | |
TCGCAACCAAAACTTCTGCA+GGG | + | tig0027096:6946-6965 | Msa1432410:CDS | 45.0% | |
AATCCAGACGGAGATTTCAC+TGG | + | tig0027096:7267-7286 | Msa1432410:intron | 45.0% | |
! | GTCTTCCAAACGCATTGACA+CGG | + | tig0027096:7783-7802 | Msa1432410:CDS | 45.0% |
AAACTCCGTGTCAATGCGTT+TGG | - | tig0027096:7791-7810 | None:intergenic | 45.0% | |
GCCTTGAACTCAGAATTGGA+AGG | + | tig0027096:7898-7917 | Msa1432410:CDS | 45.0% | |
CAGATTCTCAGACTGGATCA+TGG | - | tig0027096:8400-8419 | None:intergenic | 45.0% | |
GACTGGCAAAACAAAGACAG+TGG | + | tig0027096:8512-8531 | Msa1432410:CDS | 45.0% | |
TGGAGCACATGCTAATGTTC+TGG | - | tig0027096:8571-8590 | None:intergenic | 45.0% | |
CAACAGGTCTCGAATGAAAG+TGG | + | tig0027096:8698-8717 | Msa1432410:CDS | 45.0% | |
! | GAAAGATATCCTGGAGGCAT+CGG | - | tig0027096:8731-8750 | None:intergenic | 45.0% |
GAGGACCCCTCAAAACAATA+TGG | + | tig0027096:8837-8856 | Msa1432410:CDS | 45.0% | |
GCATTCTTGACTGTCTTGGA+AGG | + | tig0027096:9264-9283 | Msa1432410:CDS | 45.0% | |
GTTGTCTCTCATCACCTATG+AGG | - | tig0027096:9553-9572 | None:intergenic | 45.0% | |
CTAAAGGTTACTGAAGAGGC+TGG | + | tig0027096:9680-9699 | Msa1432410:intron | 45.0% | |
GTTACTGAAGAGGCTGGATA+TGG | + | tig0027096:9686-9705 | Msa1432410:CDS | 45.0% | |
GTTTGAGAGGCTGGTATTGT+TGG | + | tig0027096:9718-9737 | Msa1432410:CDS | 45.0% | |
GCTAAGGGTAAAGAACAACG+AGG | + | tig0027096:9917-9936 | Msa1432410:CDS | 45.0% | |
CGGACACAGTTCGAAGAATA+TGG | + | tig0027096:9943-9962 | Msa1432410:CDS | 45.0% | |
CAGTTCGAAGAATATGGTCG+AGG | + | tig0027096:9949-9968 | Msa1432410:CDS | 45.0% | |
AGAGACACTTGCCTTCCTTA+AGG | - | tig0027096:10003-10022 | None:intergenic | 45.0% | |
!! | CGTTCTGTTGATGGCTTTCA+AGG | + | tig0027096:10263-10282 | Msa1432410:CDS | 45.0% |
!! | TCTGTTGATGGCTTTCAAGG+CGG | + | tig0027096:10266-10285 | Msa1432410:CDS | 45.0% |
ATTCGTGCAGACATTGCCTT+TGG | + | tig0027096:10469-10488 | Msa1432410:intron | 45.0% | |
GTACTTGACGCAAAGGAAAG+AGG | + | tig0027096:10546-10565 | Msa1432410:CDS | 45.0% | |
GTGTTTCCATAATGCCGATG+AGG | + | tig0027096:10569-10588 | Msa1432410:CDS | 45.0% | |
TCTTGTCCTCATCGGCATTA+TGG | - | tig0027096:10578-10597 | None:intergenic | 45.0% | |
AGCCAGTTTCTTGTCCTCAT+CGG | - | tig0027096:10586-10605 | None:intergenic | 45.0% | |
AGACATTTGCAACAACCTCC+AGG | + | tig0027096:10694-10713 | Msa1432410:CDS | 45.0% | |
CTACCATATGCTTGCTTACC+TGG | - | tig0027096:10715-10734 | None:intergenic | 45.0% | |
AGAGGTTCCCATTATACCAG+AGG | + | tig0027096:10913-10932 | Msa1432410:CDS | 45.0% | |
TATACCAGAGGTTCGTACAG+GGG | + | tig0027096:10925-10944 | Msa1432410:CDS | 45.0% | |
!! | CAACCAAGGTGGTAATGGAT+GGG | + | tig0027096:10964-10983 | Msa1432410:exon | 45.0% |
!! | AACCAAGGTGGTAATGGATG+GGG | + | tig0027096:10965-10984 | Msa1432410:exon | 45.0% |
AGATACGGTTGCTAACTCCA+AGG | + | tig0027096:11022-11041 | Msa1432410:three_prime_UTR | 45.0% | |
CAAACTGCTGTATCAAGCCT+TGG | - | tig0027096:11042-11061 | None:intergenic | 45.0% | |
! | CCTTGTCCCTGCAGAAGTTT+TGG | - | tig0027096:6955-6974 | None:intergenic | 50.0% |
CCAAAACTTCTGCAGGGACA+AGG | + | tig0027096:6952-6971 | Msa1432410:CDS | 50.0% | |
CAAGCTTGTATGGCGTGAAC+CGG | + | tig0027096:7497-7516 | Msa1432410:CDS | 50.0% | |
AAGCTTGTATGGCGTGAACC+GGG | + | tig0027096:7498-7517 | Msa1432410:CDS | 50.0% | |
TGTAGGACCATATCAGCCAG+AGG | + | tig0027096:7633-7652 | Msa1432410:CDS | 50.0% | |
TCTCCAACCTCTGGCTGATA+TGG | - | tig0027096:7643-7662 | None:intergenic | 50.0% | |
GCAATGAGATCTCCAACCTC+TGG | - | tig0027096:7652-7671 | None:intergenic | 50.0% | |
! | AAACTTATTTGGGGCCCACC+AGG | + | tig0027096:8489-8508 | Msa1432410:CDS | 50.0% |
! | AACTTATTTGGGGCCCACCA+GGG | + | tig0027096:8490-8509 | Msa1432410:CDS | 50.0% |
!! | TTGTTTTGCCAGTCCCTGGT+GGG | - | tig0027096:8506-8525 | None:intergenic | 50.0% |
!!! | TTTGTTTTGCCAGTCCCTGG+TGG | - | tig0027096:8507-8526 | None:intergenic | 50.0% |
!!! | GTCTTTGTTTTGCCAGTCCC+TGG | - | tig0027096:8510-8529 | None:intergenic | 50.0% |
! | AGGTGTTTTGCTCCAACCAC+TGG | + | tig0027096:8777-8796 | Msa1432410:CDS | 50.0% |
! | GTTTTGCTCCAACCACTGGA+TGG | + | tig0027096:8781-8800 | Msa1432410:CDS | 50.0% |
GAGATTCAGTTCCACCGTAG+CGG | + | tig0027096:9073-9092 | Msa1432410:CDS | 50.0% | |
TAATTTCAGCTCCGCTACGG+TGG | - | tig0027096:9087-9106 | None:intergenic | 50.0% | |
ACTCTCGACGATCATGGAGA+CGG | + | tig0027096:9236-9255 | Msa1432410:CDS | 50.0% | |
! | ACCTGGCAGCTGTAATGGAA+TGG | - | tig0027096:9516-9535 | None:intergenic | 50.0% |
TGAAGACCTGGCAGCTGTAA+TGG | - | tig0027096:9521-9540 | None:intergenic | 50.0% | |
CTTCACCATGCTGTCCTCAT+AGG | + | tig0027096:9536-9555 | Msa1432410:CDS | 50.0% | |
CATCACCTATGAGGACAGCA+TGG | - | tig0027096:9544-9563 | None:intergenic | 50.0% | |
TGAGAGACAACTTCCTGCAG+TGG | + | tig0027096:9562-9581 | Msa1432410:CDS | 50.0% | |
TCCTGCAGTGGTCAAAAGCA+CGG | + | tig0027096:9574-9593 | Msa1432410:CDS | 50.0% | |
GGTAAAGAACAACGAGGTCG+CGG | + | tig0027096:9923-9942 | Msa1432410:CDS | 50.0% | |
!! | GAGCAAATGTGGCACTGACT+CGG | + | tig0027096:10366-10385 | Msa1432410:CDS | 50.0% |
!! | AGCAAATGTGGCACTGACTC+GGG | + | tig0027096:10367-10386 | Msa1432410:CDS | 50.0% |
TGCCGATGAGGACAAGAAAC+TGG | + | tig0027096:10581-10600 | Msa1432410:CDS | 50.0% | |
TGAGGACAAGAAACTGGCTG+AGG | + | tig0027096:10587-10606 | Msa1432410:CDS | 50.0% | |
GAAACTGGCTGAGGCTATTG+AGG | + | tig0027096:10596-10615 | Msa1432410:CDS | 50.0% | |
CCATATGCTTGCTTACCTGG+AGG | - | tig0027096:10712-10731 | None:intergenic | 50.0% | |
CCTCCAGGTAAGCAAGCATA+TGG | + | tig0027096:10709-10728 | Msa1432410:intron | 50.0% | |
CATTACCACCTTGGTTGCCA+TGG | - | tig0027096:10961-10980 | None:intergenic | 50.0% | |
CATGGCAACCAAGGTGGTAA+TGG | + | tig0027096:10959-10978 | Msa1432410:CDS | 50.0% | |
!! | GCAACCAAGGTGGTAATGGA+TGG | + | tig0027096:10963-10982 | Msa1432410:exon | 50.0% |
ATGTCGTCCTTGCAATACCG+AGG | - | tig0027096:11081-11100 | None:intergenic | 50.0% | |
TCGGTATTGCAAGGACGACA+TGG | + | tig0027096:11080-11099 | Msa1432410:three_prime_UTR | 50.0% | |
CGGTATTGCAAGGACGACAT+GGG | + | tig0027096:11081-11100 | Msa1432410:three_prime_UTR | 50.0% | |
GTTTGCCATTGTGGCTGTTG+TGG | + | tig0027096:11154-11173 | Msa1432410:three_prime_UTR | 50.0% | |
GCACCAGTGAAATCTCCGTC+TGG | - | tig0027096:7273-7292 | None:intergenic | 55.0% | |
GGAGATTTCACTGGTGCGAC+AGG | + | tig0027096:7276-7295 | Msa1432410:intron | 55.0% | |
GGACCATATCAGCCAGAGGT+TGG | + | tig0027096:7637-7656 | Msa1432410:CDS | 55.0% | |
GCCATTCCATTACAGCTGCC+AGG | + | tig0027096:9512-9531 | Msa1432410:CDS | 55.0% | |
AGGACAGCATGGTGAAGACC+TGG | - | tig0027096:9533-9552 | None:intergenic | 55.0% | |
! | ACCGTGCTTTTGACCACTGC+AGG | - | tig0027096:9578-9597 | None:intergenic | 55.0% |
CACCCCATCCATTACCACCT+TGG | - | tig0027096:10970-10989 | None:intergenic | 55.0% | |
GGACAGTTACCGATGCCTCC+AGG | + | tig0027096:8719-8738 | Msa1432410:CDS | 60.0% | |
!! | ATGTGGCACTGACTCGGGCT+AGG | + | tig0027096:10372-10391 | Msa1432410:CDS | 60.0% |
! | ATTTGGGGCCCACCAGGGAC+TGG | + | tig0027096:8495-8514 | Msa1432410:CDS | 65.0% |
CCTGCCCCTGTACGAACCTC+TGG | - | tig0027096:10932-10951 | None:intergenic | 65.0% | |
CCAGAGGTTCGTACAGGGGC+AGG | + | tig0027096:10929-10948 | Msa1432410:CDS | 65.0% | |
GTTCGTACAGGGGCAGGAGC+AGG | + | tig0027096:10935-10954 | Msa1432410:CDS | 65.0% | |
GGAGCAGGCCATGGCAACCA+AGG | + | tig0027096:10950-10969 | Msa1432410:CDS | 65.0% | |
GCAGGCCATGGCAACCAAGG+TGG | + | tig0027096:10953-10972 | Msa1432410:CDS | 65.0% | |
ACAGGGGCAGGAGCAGGCCA+TGG | + | tig0027096:10941-10960 | Msa1432410:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0027096 | gene | 6653 | 11264 | 6653 | ID=Msa1432410;Name=Msa1432410 |
tig0027096 | mRNA | 6653 | 11264 | 6653 | ID=Msa1432410-mRNA-1;Parent=Msa1432410;Name=Msa1432410-mRNA-1;_AED=0.18;_eAED=0.18;_QI=204|0.83|0.71|1|0.66|0.57|7|286|955 |
tig0027096 | exon | 6653 | 6973 | 6653 | ID=Msa1432410-mRNA-1:exon:8070;Parent=Msa1432410-mRNA-1 |
tig0027096 | exon | 7403 | 7966 | 7403 | ID=Msa1432410-mRNA-1:exon:8071;Parent=Msa1432410-mRNA-1 |
tig0027096 | exon | 8330 | 9595 | 8330 | ID=Msa1432410-mRNA-1:exon:8072;Parent=Msa1432410-mRNA-1 |
tig0027096 | exon | 9686 | 10014 | 9686 | ID=Msa1432410-mRNA-1:exon:8073;Parent=Msa1432410-mRNA-1 |
tig0027096 | exon | 10121 | 10393 | 10121 | ID=Msa1432410-mRNA-1:exon:8074;Parent=Msa1432410-mRNA-1 |
tig0027096 | exon | 10479 | 10715 | 10479 | ID=Msa1432410-mRNA-1:exon:8075;Parent=Msa1432410-mRNA-1 |
tig0027096 | exon | 10897 | 11264 | 10897 | ID=Msa1432410-mRNA-1:exon:8076;Parent=Msa1432410-mRNA-1 |
tig0027096 | five_prime_UTR | 6653 | 6856 | 6653 | ID=Msa1432410-mRNA-1:five_prime_utr;Parent=Msa1432410-mRNA-1 |
tig0027096 | CDS | 6857 | 6973 | 6857 | ID=Msa1432410-mRNA-1:cds;Parent=Msa1432410-mRNA-1 |
tig0027096 | CDS | 7403 | 7966 | 7403 | ID=Msa1432410-mRNA-1:cds;Parent=Msa1432410-mRNA-1 |
tig0027096 | CDS | 8330 | 9595 | 8330 | ID=Msa1432410-mRNA-1:cds;Parent=Msa1432410-mRNA-1 |
tig0027096 | CDS | 9686 | 10014 | 9686 | ID=Msa1432410-mRNA-1:cds;Parent=Msa1432410-mRNA-1 |
tig0027096 | CDS | 10121 | 10393 | 10121 | ID=Msa1432410-mRNA-1:cds;Parent=Msa1432410-mRNA-1 |
tig0027096 | CDS | 10479 | 10715 | 10479 | ID=Msa1432410-mRNA-1:cds;Parent=Msa1432410-mRNA-1 |
tig0027096 | CDS | 10897 | 10978 | 10897 | ID=Msa1432410-mRNA-1:cds;Parent=Msa1432410-mRNA-1 |
tig0027096 | three_prime_UTR | 10979 | 11264 | 10979 | ID=Msa1432410-mRNA-1:three_prime_utr;Parent=Msa1432410-mRNA-1 |
Gene Sequence |
Protein sequence |