Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435120 | XP_003603240.2 | 98.431 | 255 | 3 | 1 | 1 | 255 | 1 | 254 | 9.02e-179 | 519 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435120 | sp|P56821|EIF3B_TOBAC | 80.784 | 255 | 49 | 0 | 1 | 255 | 1 | 255 | 1.64e-150 | 439 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435120 | G7J950 | 98.431 | 255 | 3 | 1 | 1 | 255 | 1 | 254 | 4.31e-179 | 519 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0378410 | Msa1435120 | 0.806125 | 9.572369e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435120 | MtrunA17_Chr3g0136501 | 98.431 | 255 | 3 | 1 | 1 | 255 | 1 | 254 | 0.0 | 519 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435120 | AT5G27640.3 | 68.273 | 249 | 79 | 0 | 5 | 253 | 1 | 249 | 3.31e-125 | 372 |
| Msa1435120 | AT5G27640.1 | 68.273 | 249 | 79 | 0 | 5 | 253 | 1 | 249 | 3.31e-125 | 372 |
| Msa1435120 | AT5G25780.1 | 70.464 | 237 | 70 | 0 | 17 | 253 | 14 | 250 | 5.36e-123 | 366 |
| Msa1435120 | AT5G27640.2 | 61.818 | 275 | 79 | 1 | 5 | 253 | 1 | 275 | 2.49e-119 | 357 |
Find 84 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGAGTTTGATTCTGGATT+TGG | 0.226852 | tig0027613:+57627 | Msa1435120:CDS |
| ACATACTCACAGAAAATATA+TGG | 0.231895 | tig0027613:-57968 | None:intergenic |
| GAGAATCTGGAGTTTGATTC+TGG | 0.241775 | tig0027613:+57621 | Msa1435120:CDS |
| GAAGACAAAGCTTTGCTTCT+CGG | 0.279856 | tig0027613:+57417 | Msa1435120:CDS |
| CCTGGAGCATATTCCTTGTT+TGG | 0.282373 | tig0027613:-58041 | None:intergenic |
| CTTACAGCACGTTTATAAAC+AGG | 0.307612 | tig0027613:-58523 | None:intergenic |
| GTCACCTTTGGGTACTTACT+TGG | 0.345166 | tig0027613:+58675 | Msa1435120:CDS |
| ATTGCGGTGGTGAGTGATTA+TGG | 0.348784 | tig0027613:-57363 | None:intergenic |
| GCGACAACGCTAAAGCTTTA+CGG | 0.354532 | tig0027613:+57338 | Msa1435120:five_prime_UTR |
| TCGGTAGAGTTCAGCGCAAC+GGG | 0.356811 | tig0027613:-57156 | None:intergenic |
| TCCTTCTACTGAAAAGTCCT+TGG | 0.402875 | tig0027613:+57779 | Msa1435120:CDS |
| AATGGATATGTCTGTGGATT+GGG | 0.412928 | tig0027613:-57091 | None:intergenic |
| TTAGCGTTGTCGCAGTGAAA+TGG | 0.428140 | tig0027613:-57328 | None:intergenic |
| TGTTATTCAAGAGGAGAATC+TGG | 0.430382 | tig0027613:+57608 | Msa1435120:CDS |
| GGAGGAGGAGCCCACTCGTC+TGG | 0.438943 | tig0027613:-58020 | None:intergenic |
| AATTTCTCCTTGGGAACAAC+AGG | 0.441899 | tig0027613:-57675 | None:intergenic |
| CTGGCTGTGCCGTCGGTAAA+CGG | 0.442377 | tig0027613:+57201 | Msa1435120:five_prime_UTR |
| ATATGTCTGTGGATTGGGCT+CGG | 0.444679 | tig0027613:-57086 | None:intergenic |
| AAGCTTCTCGAATTTCTCCT+TGG | 0.445814 | tig0027613:-57685 | None:intergenic |
| TAGTTGTTGACGGCGGCAAT+CGG | 0.449280 | tig0027613:-57175 | None:intergenic |
| CTTGGCAACAGTTCACCGTC+AGG | 0.449567 | tig0027613:+58693 | Msa1435120:CDS |
| CTATTAAAGAGGATGGTCTC+TGG | 0.450216 | tig0027613:+57745 | Msa1435120:CDS |
| GGAGCATATTCCTTGTTTGG+AGG | 0.451980 | tig0027613:-58038 | None:intergenic |
| AGCTTCTCGAATTTCTCCTT+GGG | 0.454211 | tig0027613:-57684 | None:intergenic |
| AACCAGCACGAATCACAAAC+TGG | 0.455853 | tig0027613:-58453 | None:intergenic |
| GAAGACTCAAGGATACAAAC+TGG | 0.456776 | tig0027613:+57938 | Msa1435120:CDS |
| CCTTCTACTGAAAAGTCCTT+GGG | 0.460856 | tig0027613:+57780 | Msa1435120:CDS |
| TTTGTTGATTTAGGGTTTGG+AGG | 0.461123 | tig0027613:-57122 | None:intergenic |
| CCAAACAAGGAATATGCTCC+AGG | 0.464666 | tig0027613:+58041 | Msa1435120:CDS |
| TTTGTACAATGGTCACCTTT+GGG | 0.473131 | tig0027613:+58664 | Msa1435120:CDS |
| CATGCGTTACGCACATCCTC+AGG | 0.475971 | tig0027613:+58756 | Msa1435120:CDS |
| CAGCCAGGTTTAGTTGTTGA+CGG | 0.479174 | tig0027613:-57185 | None:intergenic |
| GGTTTGGAGGCTCTTCCAAA+TGG | 0.481121 | tig0027613:-57109 | None:intergenic |
| CAAAGGAAAATCTGCAACAA+TGG | 0.488176 | tig0027613:+58407 | Msa1435120:intron |
| GCATATTCCTTGTTTGGAGG+AGG | 0.495988 | tig0027613:-58035 | None:intergenic |
| GACCAGTTTGTGATTCGTGC+TGG | 0.499072 | tig0027613:+58451 | Msa1435120:CDS |
| AGGATTCCGCAGTTGTCACC+TGG | 0.502357 | tig0027613:-57483 | None:intergenic |
| AAATGGATATGTCTGTGGAT+TGG | 0.503467 | tig0027613:-57092 | None:intergenic |
| GCACGTTTATAAACAGGGTC+GGG | 0.503903 | tig0027613:-58517 | None:intergenic |
| AATCCACAGACATATCCATT+TGG | 0.506225 | tig0027613:+57094 | Msa1435120:five_prime_UTR |
| TATGTCTGTGGATTGGGCTC+GGG | 0.511737 | tig0027613:-57085 | None:intergenic |
| GATTCCATTCACCTTCCTCC+AGG | 0.514429 | tig0027613:+57465 | Msa1435120:CDS |
| CCGCCGTCAACAACTAAACC+TGG | 0.522577 | tig0027613:+57182 | Msa1435120:five_prime_UTR |
| CATACTCACAGAAAATATAT+GGG | 0.522843 | tig0027613:-57967 | None:intergenic |
| GTCACCTGGAGGAAGGTGAA+TGG | 0.523301 | tig0027613:-57469 | None:intergenic |
| GTGACAACTGCGGAATCCTC+AGG | 0.526265 | tig0027613:+57487 | Msa1435120:CDS |
| ATTTGGCAATATTATTGTAG+TGG | 0.528989 | tig0027613:+57644 | Msa1435120:CDS |
| ATCACTCACCACCGCAATCA+TGG | 0.534565 | tig0027613:+57368 | Msa1435120:exon |
| CGCAGTTGTCACCTGGAGGA+AGG | 0.540787 | tig0027613:-57476 | None:intergenic |
| AATGGAATCGAGATCGATAG+AGG | 0.542175 | tig0027613:-57451 | None:intergenic |
| AGCACGTTTATAAACAGGGT+CGG | 0.550976 | tig0027613:-58518 | None:intergenic |
| CATTGAGTACAATACTCCTC+AGG | 0.551994 | tig0027613:+57812 | Msa1435120:CDS |
| ATCGGTAGAGTTCAGCGCAA+CGG | 0.560224 | tig0027613:-57157 | None:intergenic |
| TAATCTACCTGTTGTTCCCA+AGG | 0.563226 | tig0027613:+57668 | Msa1435120:CDS |
| TCAGATTGGTGCTATTAAAG+AGG | 0.572204 | tig0027613:+57734 | Msa1435120:CDS |
| ACAATGGCTTACTGATGCTA+AGG | 0.574787 | tig0027613:+58423 | Msa1435120:CDS |
| CGTTTACCGACGGCACAGCC+AGG | 0.574861 | tig0027613:-57200 | None:intergenic |
| ACTAAACCTGGCTGTGCCGT+CGG | 0.578062 | tig0027613:+57194 | Msa1435120:five_prime_UTR |
| ATTGGTGCTATTAAAGAGGA+TGG | 0.581702 | tig0027613:+57738 | Msa1435120:CDS |
| TTGGCAACAGTTCACCGTCA+GGG | 0.582074 | tig0027613:+58694 | Msa1435120:CDS |
| GTAACGCATGAGACGATTGA+AGG | 0.583285 | tig0027613:-58743 | None:intergenic |
| CATGAAAGTGCCAGACGAGT+GGG | 0.584342 | tig0027613:+58010 | Msa1435120:CDS |
| GTGGGCTCCTCCTCCAAACA+AGG | 0.584356 | tig0027613:+58028 | Msa1435120:CDS |
| CATTACATCCGCCATGATTG+CGG | 0.586421 | tig0027613:-57379 | None:intergenic |
| TGACGATGATGTTATTCAAG+AGG | 0.592706 | tig0027613:+57599 | Msa1435120:CDS |
| CTTCCAAATGGATATGTCTG+TGG | 0.597999 | tig0027613:-57097 | None:intergenic |
| TCATGAAAGTGCCAGACGAG+TGG | 0.602382 | tig0027613:+58009 | Msa1435120:CDS |
| CTTGCTAAAGAGAAGACTCA+AGG | 0.612535 | tig0027613:+57927 | Msa1435120:CDS |
| CAAACAAGGAATATGCTCCA+GGG | 0.614249 | tig0027613:+58042 | Msa1435120:CDS |
| TCGTGCTGGTTCAGATACTG+AGG | 0.620611 | tig0027613:+58465 | Msa1435120:CDS |
| TGGCAACAGTTCACCGTCAG+GGG | 0.629158 | tig0027613:+58695 | Msa1435120:CDS |
| CTCAATGAAGCAGTAACCCA+AGG | 0.644342 | tig0027613:-57796 | None:intergenic |
| GGCAACAGTTCACCGTCAGG+GGG | 0.645973 | tig0027613:+58696 | Msa1435120:CDS |
| TACATCCGCCATGATTGCGG+TGG | 0.656957 | tig0027613:-57376 | None:intergenic |
| AAACAAGGAATATGCTCCAG+GGG | 0.658157 | tig0027613:+58043 | Msa1435120:CDS |
| TTACAGCACGTTTATAAACA+GGG | 0.671673 | tig0027613:-58522 | None:intergenic |
| ACGCATGAGACGATTGAAGG+TGG | 0.677518 | tig0027613:-58740 | None:intergenic |
| CTTCCTCCAGGTGACAACTG+CGG | 0.689197 | tig0027613:+57477 | Msa1435120:CDS |
| ATTCCGCAGTTGTCACCTGG+AGG | 0.690949 | tig0027613:-57480 | None:intergenic |
| GTTGCCAAGTAAGTACCCAA+AGG | 0.691070 | tig0027613:-58679 | None:intergenic |
| GGATTCTTACCGTTTACCGA+CGG | 0.695877 | tig0027613:-57210 | None:intergenic |
| CCAGGTTTAGTTGTTGACGG+CGG | 0.714336 | tig0027613:-57182 | None:intergenic |
| CGGTAGAGTTCAGCGCAACG+GGG | 0.740521 | tig0027613:-57155 | None:intergenic |
| ACTCACCACCGCAATCATGG+CGG | 0.744529 | tig0027613:+57371 | Msa1435120:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTAATATCTTTTACT+TGG | + | tig0027613:58341-58360 | Msa1435120:intron | 10.0% |
| !!! | TTAATTTAATATCTTTTACT+TGG | + | tig0027613:58341-58360 | Msa1435120:intron | 10.0% |
| !! | TTTGGTATAAAATTAACAAA+AGG | - | tig0027613:58139-58158 | None:intergenic | 15.0% |
| !!! | ATTTTATACCAAAAACAAAT+AGG | + | tig0027613:58146-58165 | Msa1435120:intron | 15.0% |
| !!! | TATTTTTTGAATTACAGTTT+TGG | + | tig0027613:58632-58651 | Msa1435120:intron | 15.0% |
| !! | TTTGGTATAAAATTAACAAA+AGG | - | tig0027613:58139-58158 | None:intergenic | 15.0% |
| !!! | ATTTTATACCAAAAACAAAT+AGG | + | tig0027613:58146-58165 | Msa1435120:intron | 15.0% |
| !!! | TATTTTTTGAATTACAGTTT+TGG | + | tig0027613:58632-58651 | Msa1435120:intron | 15.0% |
| !! | AATCATAAAATCTGAAAGTA+TGG | - | tig0027613:57547-57566 | None:intergenic | 20.0% |
| !! | AGAAAAATTTATAGTCAGAT+TGG | + | tig0027613:57720-57739 | Msa1435120:CDS | 20.0% |
| !!! | GTAAATAGATACTCTTTTTT+AGG | + | tig0027613:57834-57853 | Msa1435120:intron | 20.0% |
| !! | ATCATATTTGTAATTCTACA+AGG | - | tig0027613:58255-58274 | None:intergenic | 20.0% |
| !! | TGTAGAATTACAAATATGAT+TGG | + | tig0027613:58255-58274 | Msa1435120:intron | 20.0% |
| !!! | TGTATTATTTGATGTTTTCT+AGG | + | tig0027613:58568-58587 | Msa1435120:intron | 20.0% |
| !! | TTAAGAGATTAATGATCAAA+GGG | - | tig0027613:58595-58614 | None:intergenic | 20.0% |
| !! | ATTAAGAGATTAATGATCAA+AGG | - | tig0027613:58596-58615 | None:intergenic | 20.0% |
| !! | AAAAATATGACAACCATAAA+GGG | - | tig0027613:58619-58638 | None:intergenic | 20.0% |
| !! | AAAAAATATGACAACCATAA+AGG | - | tig0027613:58620-58639 | None:intergenic | 20.0% |
| !! | AATCATAAAATCTGAAAGTA+TGG | - | tig0027613:57547-57566 | None:intergenic | 20.0% |
| !! | AGAAAAATTTATAGTCAGAT+TGG | + | tig0027613:57720-57739 | Msa1435120:CDS | 20.0% |
| !!! | GTAAATAGATACTCTTTTTT+AGG | + | tig0027613:57834-57853 | Msa1435120:intron | 20.0% |
| !! | ATCATATTTGTAATTCTACA+AGG | - | tig0027613:58255-58274 | None:intergenic | 20.0% |
| !! | TGTAGAATTACAAATATGAT+TGG | + | tig0027613:58255-58274 | Msa1435120:intron | 20.0% |
| !!! | TGTATTATTTGATGTTTTCT+AGG | + | tig0027613:58568-58587 | Msa1435120:intron | 20.0% |
| !! | TTAAGAGATTAATGATCAAA+GGG | - | tig0027613:58595-58614 | None:intergenic | 20.0% |
| !! | ATTAAGAGATTAATGATCAA+AGG | - | tig0027613:58596-58615 | None:intergenic | 20.0% |
| !! | AAAAATATGACAACCATAAA+GGG | - | tig0027613:58619-58638 | None:intergenic | 20.0% |
| !! | AAAAAATATGACAACCATAA+AGG | - | tig0027613:58620-58639 | None:intergenic | 20.0% |
| !!! | AACGATGTTTTGTTGATTTA+GGG | - | tig0027613:57133-57152 | None:intergenic | 25.0% |
| ! | AAGAGTAAATTAATGTGGAA+AGG | - | tig0027613:57283-57302 | None:intergenic | 25.0% |
| ! | GATAGAAGAGTAAATTAATG+TGG | - | tig0027613:57288-57307 | None:intergenic | 25.0% |
| ! | ATTTGGCAATATTATTGTAG+TGG | + | tig0027613:57644-57663 | Msa1435120:CDS | 25.0% |
| !!! | TTCAATGTTTGTTTTACCAT+CGG | + | tig0027613:57862-57881 | Msa1435120:intron | 25.0% |
| !!! | TAAATTGCAATGGCTATTTT+AGG | + | tig0027613:57896-57915 | Msa1435120:intron | 25.0% |
| ! | CATACTCACAGAAAATATAT+GGG | - | tig0027613:57970-57989 | None:intergenic | 25.0% |
| ! | ACATACTCACAGAAAATATA+TGG | - | tig0027613:57971-57990 | None:intergenic | 25.0% |
| ! | GTAGTTAGATACTTAGATTA+AGG | + | tig0027613:58200-58219 | Msa1435120:intron | 25.0% |
| !!! | ACAAATATGATTGGTTTACT+TGG | + | tig0027613:58264-58283 | Msa1435120:intron | 25.0% |
| ! | AATCACTATGTTCTTAAATC+TGG | + | tig0027613:58304-58323 | Msa1435120:intron | 25.0% |
| ! | TAAGAATCACTAAACATAGA+AGG | - | tig0027613:58370-58389 | None:intergenic | 25.0% |
| ! | CTATGTTTAGTGATTCTTAA+TGG | + | tig0027613:58371-58390 | Msa1435120:intron | 25.0% |
| ! | TTAATCTCTTAATCCCTTTA+TGG | + | tig0027613:58603-58622 | Msa1435120:intron | 25.0% |
| !!! | TTTTGAATTACAGTTTTGGA+CGG | + | tig0027613:58636-58655 | Msa1435120:intron | 25.0% |
| !!! | AACGATGTTTTGTTGATTTA+GGG | - | tig0027613:57133-57152 | None:intergenic | 25.0% |
| ! | AAGAGTAAATTAATGTGGAA+AGG | - | tig0027613:57283-57302 | None:intergenic | 25.0% |
| ! | GATAGAAGAGTAAATTAATG+TGG | - | tig0027613:57288-57307 | None:intergenic | 25.0% |
| ! | ATTTGGCAATATTATTGTAG+TGG | + | tig0027613:57644-57663 | Msa1435120:CDS | 25.0% |
| !!! | TTCAATGTTTGTTTTACCAT+CGG | + | tig0027613:57862-57881 | Msa1435120:intron | 25.0% |
| !!! | TAAATTGCAATGGCTATTTT+AGG | + | tig0027613:57896-57915 | Msa1435120:intron | 25.0% |
| ! | CATACTCACAGAAAATATAT+GGG | - | tig0027613:57970-57989 | None:intergenic | 25.0% |
| ! | ACATACTCACAGAAAATATA+TGG | - | tig0027613:57971-57990 | None:intergenic | 25.0% |
| ! | GTAGTTAGATACTTAGATTA+AGG | + | tig0027613:58200-58219 | Msa1435120:intron | 25.0% |
| !!! | ACAAATATGATTGGTTTACT+TGG | + | tig0027613:58264-58283 | Msa1435120:intron | 25.0% |
| ! | AATCACTATGTTCTTAAATC+TGG | + | tig0027613:58304-58323 | Msa1435120:intron | 25.0% |
| ! | TAAGAATCACTAAACATAGA+AGG | - | tig0027613:58370-58389 | None:intergenic | 25.0% |
| ! | CTATGTTTAGTGATTCTTAA+TGG | + | tig0027613:58371-58390 | Msa1435120:intron | 25.0% |
| ! | TTAATCTCTTAATCCCTTTA+TGG | + | tig0027613:58603-58622 | Msa1435120:intron | 25.0% |
| !!! | TTTTGAATTACAGTTTTGGA+CGG | + | tig0027613:58636-58655 | Msa1435120:intron | 25.0% |
| !!! | TGTTTTGTTGATTTAGGGTT+TGG | - | tig0027613:57128-57147 | None:intergenic | 30.0% |
| !!! | GAACGATGTTTTGTTGATTT+AGG | - | tig0027613:57134-57153 | None:intergenic | 30.0% |
| !! | AGCATTGATTAATATACCTG+AGG | - | tig0027613:57506-57525 | None:intergenic | 30.0% |
| !! | AAAGAGTATCTATTTACCTG+AGG | - | tig0027613:57831-57850 | None:intergenic | 30.0% |
| TTGATGAGGTTAAATTGCAA+TGG | + | tig0027613:57886-57905 | Msa1435120:intron | 30.0% | |
| ! | ATGGTCTTTATTTCTCTCAA+AGG | + | tig0027613:58390-58409 | Msa1435120:intron | 30.0% |
| TTACAGCACGTTTATAAACA+GGG | - | tig0027613:58525-58544 | None:intergenic | 30.0% | |
| !!! | TGTTTTGTTGATTTAGGGTT+TGG | - | tig0027613:57128-57147 | None:intergenic | 30.0% |
| !!! | GAACGATGTTTTGTTGATTT+AGG | - | tig0027613:57134-57153 | None:intergenic | 30.0% |
| !! | AGCATTGATTAATATACCTG+AGG | - | tig0027613:57506-57525 | None:intergenic | 30.0% |
| !! | AAAGAGTATCTATTTACCTG+AGG | - | tig0027613:57831-57850 | None:intergenic | 30.0% |
| TTGATGAGGTTAAATTGCAA+TGG | + | tig0027613:57886-57905 | Msa1435120:intron | 30.0% | |
| ! | ATGGTCTTTATTTCTCTCAA+AGG | + | tig0027613:58390-58409 | Msa1435120:intron | 30.0% |
| TTACAGCACGTTTATAAACA+GGG | - | tig0027613:58525-58544 | None:intergenic | 30.0% | |
| AATGGATATGTCTGTGGATT+GGG | - | tig0027613:57094-57113 | None:intergenic | 35.0% | |
| AAATGGATATGTCTGTGGAT+TGG | - | tig0027613:57095-57114 | None:intergenic | 35.0% | |
| AATCCACAGACATATCCATT+TGG | + | tig0027613:57094-57113 | Msa1435120:five_prime_UTR | 35.0% | |
| !! | TTTGTTGATTTAGGGTTTGG+AGG | - | tig0027613:57125-57144 | None:intergenic | 35.0% |
| GATGAAGAGAAGAGAATCTA+GGG | - | tig0027613:57234-57253 | None:intergenic | 35.0% | |
| AGATGAAGAGAAGAGAATCT+AGG | - | tig0027613:57235-57254 | None:intergenic | 35.0% | |
| TGACGATGATGTTATTCAAG+AGG | + | tig0027613:57599-57618 | Msa1435120:CDS | 35.0% | |
| TGTTATTCAAGAGGAGAATC+TGG | + | tig0027613:57608-57627 | Msa1435120:CDS | 35.0% | |
| !! | TCAGATTGGTGCTATTAAAG+AGG | + | tig0027613:57734-57753 | Msa1435120:CDS | 35.0% |
| !! | ATTGGTGCTATTAAAGAGGA+TGG | + | tig0027613:57738-57757 | Msa1435120:CDS | 35.0% |
| ! | TTTTCAGTAGAAGGATCAAC+AGG | - | tig0027613:57774-57793 | None:intergenic | 35.0% |
| ATTTAACCTCATCAAACCGA+TGG | - | tig0027613:57881-57900 | None:intergenic | 35.0% | |
| AGAGATATAATCATTACCCC+TGG | - | tig0027613:58062-58081 | None:intergenic | 35.0% | |
| ! | TCATTTGAGACCACCTTATT+AGG | + | tig0027613:58102-58121 | Msa1435120:intron | 35.0% |
| AGACCACCTTATTAGGATTA+TGG | + | tig0027613:58109-58128 | Msa1435120:intron | 35.0% | |
| GACCACCTTATTAGGATTAT+GGG | + | tig0027613:58110-58129 | Msa1435120:intron | 35.0% | |
| !! | AAGTGGTGCCTATTTGTTTT+TGG | - | tig0027613:58157-58176 | None:intergenic | 35.0% |
| ! | GGCAATTTCATGTTTTCTCA+TGG | + | tig0027613:58221-58240 | Msa1435120:intron | 35.0% |
| TTGTAATTCTACAAGGAGTG+TGG | - | tig0027613:58248-58267 | None:intergenic | 35.0% | |
| AACATAGTGATTGAACGTTG+GGG | - | tig0027613:58296-58315 | None:intergenic | 35.0% | |
| GAACATAGTGATTGAACGTT+GGG | - | tig0027613:58297-58316 | None:intergenic | 35.0% | |
| AGAACATAGTGATTGAACGT+TGG | - | tig0027613:58298-58317 | None:intergenic | 35.0% | |
| CAAAGGAAAATCTGCAACAA+TGG | + | tig0027613:58407-58426 | Msa1435120:intron | 35.0% | |
| CTTACAGCACGTTTATAAAC+AGG | - | tig0027613:58526-58545 | None:intergenic | 35.0% | |
| ! | TTTTGTACAATGGTCACCTT+TGG | + | tig0027613:58663-58682 | Msa1435120:CDS | 35.0% |
| TTTGTACAATGGTCACCTTT+GGG | + | tig0027613:58664-58683 | Msa1435120:CDS | 35.0% | |
| AATGGATATGTCTGTGGATT+GGG | - | tig0027613:57094-57113 | None:intergenic | 35.0% | |
| AAATGGATATGTCTGTGGAT+TGG | - | tig0027613:57095-57114 | None:intergenic | 35.0% | |
| AATCCACAGACATATCCATT+TGG | + | tig0027613:57094-57113 | Msa1435120:five_prime_UTR | 35.0% | |
| !! | TTTGTTGATTTAGGGTTTGG+AGG | - | tig0027613:57125-57144 | None:intergenic | 35.0% |
| GATGAAGAGAAGAGAATCTA+GGG | - | tig0027613:57234-57253 | None:intergenic | 35.0% | |
| AGATGAAGAGAAGAGAATCT+AGG | - | tig0027613:57235-57254 | None:intergenic | 35.0% | |
| TGACGATGATGTTATTCAAG+AGG | + | tig0027613:57599-57618 | Msa1435120:CDS | 35.0% | |
| TGTTATTCAAGAGGAGAATC+TGG | + | tig0027613:57608-57627 | Msa1435120:CDS | 35.0% | |
| !! | TCAGATTGGTGCTATTAAAG+AGG | + | tig0027613:57734-57753 | Msa1435120:CDS | 35.0% |
| !! | ATTGGTGCTATTAAAGAGGA+TGG | + | tig0027613:57738-57757 | Msa1435120:CDS | 35.0% |
| ! | TTTTCAGTAGAAGGATCAAC+AGG | - | tig0027613:57774-57793 | None:intergenic | 35.0% |
| ATTTAACCTCATCAAACCGA+TGG | - | tig0027613:57881-57900 | None:intergenic | 35.0% | |
| AGAGATATAATCATTACCCC+TGG | - | tig0027613:58062-58081 | None:intergenic | 35.0% | |
| ! | TCATTTGAGACCACCTTATT+AGG | + | tig0027613:58102-58121 | Msa1435120:intron | 35.0% |
| AGACCACCTTATTAGGATTA+TGG | + | tig0027613:58109-58128 | Msa1435120:intron | 35.0% | |
| GACCACCTTATTAGGATTAT+GGG | + | tig0027613:58110-58129 | Msa1435120:intron | 35.0% | |
| !! | AAGTGGTGCCTATTTGTTTT+TGG | - | tig0027613:58157-58176 | None:intergenic | 35.0% |
| ! | GGCAATTTCATGTTTTCTCA+TGG | + | tig0027613:58221-58240 | Msa1435120:intron | 35.0% |
| TTGTAATTCTACAAGGAGTG+TGG | - | tig0027613:58248-58267 | None:intergenic | 35.0% | |
| AACATAGTGATTGAACGTTG+GGG | - | tig0027613:58296-58315 | None:intergenic | 35.0% | |
| GAACATAGTGATTGAACGTT+GGG | - | tig0027613:58297-58316 | None:intergenic | 35.0% | |
| AGAACATAGTGATTGAACGT+TGG | - | tig0027613:58298-58317 | None:intergenic | 35.0% | |
| CAAAGGAAAATCTGCAACAA+TGG | + | tig0027613:58407-58426 | Msa1435120:intron | 35.0% | |
| CTTACAGCACGTTTATAAAC+AGG | - | tig0027613:58526-58545 | None:intergenic | 35.0% | |
| ! | TTTTGTACAATGGTCACCTT+TGG | + | tig0027613:58663-58682 | Msa1435120:CDS | 35.0% |
| TTTGTACAATGGTCACCTTT+GGG | + | tig0027613:58664-58683 | Msa1435120:CDS | 35.0% | |
| CTTCCAAATGGATATGTCTG+TGG | - | tig0027613:57100-57119 | None:intergenic | 40.0% | |
| GAAGACAAAGCTTTGCTTCT+CGG | + | tig0027613:57417-57436 | Msa1435120:CDS | 40.0% | |
| AATGGAATCGAGATCGATAG+AGG | - | tig0027613:57454-57473 | None:intergenic | 40.0% | |
| ! | GAGAATCTGGAGTTTGATTC+TGG | + | tig0027613:57621-57640 | Msa1435120:CDS | 40.0% |
| CTGGAGTTTGATTCTGGATT+TGG | + | tig0027613:57627-57646 | Msa1435120:CDS | 40.0% | |
| TAATCTACCTGTTGTTCCCA+AGG | + | tig0027613:57668-57687 | Msa1435120:CDS | 40.0% | |
| AATTTCTCCTTGGGAACAAC+AGG | - | tig0027613:57678-57697 | None:intergenic | 40.0% | |
| AGCTTCTCGAATTTCTCCTT+GGG | - | tig0027613:57687-57706 | None:intergenic | 40.0% | |
| AAGCTTCTCGAATTTCTCCT+TGG | - | tig0027613:57688-57707 | None:intergenic | 40.0% | |
| CTATTAAAGAGGATGGTCTC+TGG | + | tig0027613:57745-57764 | Msa1435120:CDS | 40.0% | |
| TCCTTCTACTGAAAAGTCCT+TGG | + | tig0027613:57779-57798 | Msa1435120:CDS | 40.0% | |
| CCTTCTACTGAAAAGTCCTT+GGG | + | tig0027613:57780-57799 | Msa1435120:CDS | 40.0% | |
| CATTGAGTACAATACTCCTC+AGG | + | tig0027613:57812-57831 | Msa1435120:CDS | 40.0% | |
| !!! | GTTTTACCATCGGTTTGATG+AGG | + | tig0027613:57872-57891 | Msa1435120:intron | 40.0% |
| CTTGCTAAAGAGAAGACTCA+AGG | + | tig0027613:57927-57946 | Msa1435120:CDS | 40.0% | |
| GAAGACTCAAGGATACAAAC+TGG | + | tig0027613:57938-57957 | Msa1435120:CDS | 40.0% | |
| CAAACAAGGAATATGCTCCA+GGG | + | tig0027613:58042-58061 | Msa1435120:CDS | 40.0% | |
| AAACAAGGAATATGCTCCAG+GGG | + | tig0027613:58043-58062 | Msa1435120:CDS | 40.0% | |
| CTCCCATAATCCTAATAAGG+TGG | - | tig0027613:58115-58134 | None:intergenic | 40.0% | |
| GGTCTCCCATAATCCTAATA+AGG | - | tig0027613:58118-58137 | None:intergenic | 40.0% | |
| ACAATGGCTTACTGATGCTA+AGG | + | tig0027613:58423-58442 | Msa1435120:CDS | 40.0% | |
| ! | GTTCAGATACTGAGGTTTTG+TGG | + | tig0027613:58473-58492 | Msa1435120:CDS | 40.0% |
| AGCACGTTTATAAACAGGGT+CGG | - | tig0027613:58521-58540 | None:intergenic | 40.0% | |
| CTTCCAAATGGATATGTCTG+TGG | - | tig0027613:57100-57119 | None:intergenic | 40.0% | |
| GAAGACAAAGCTTTGCTTCT+CGG | + | tig0027613:57417-57436 | Msa1435120:CDS | 40.0% | |
| AATGGAATCGAGATCGATAG+AGG | - | tig0027613:57454-57473 | None:intergenic | 40.0% | |
| ! | GAGAATCTGGAGTTTGATTC+TGG | + | tig0027613:57621-57640 | Msa1435120:CDS | 40.0% |
| CTGGAGTTTGATTCTGGATT+TGG | + | tig0027613:57627-57646 | Msa1435120:CDS | 40.0% | |
| TAATCTACCTGTTGTTCCCA+AGG | + | tig0027613:57668-57687 | Msa1435120:CDS | 40.0% | |
| AATTTCTCCTTGGGAACAAC+AGG | - | tig0027613:57678-57697 | None:intergenic | 40.0% | |
| AGCTTCTCGAATTTCTCCTT+GGG | - | tig0027613:57687-57706 | None:intergenic | 40.0% | |
| AAGCTTCTCGAATTTCTCCT+TGG | - | tig0027613:57688-57707 | None:intergenic | 40.0% | |
| CTATTAAAGAGGATGGTCTC+TGG | + | tig0027613:57745-57764 | Msa1435120:CDS | 40.0% | |
| TCCTTCTACTGAAAAGTCCT+TGG | + | tig0027613:57779-57798 | Msa1435120:CDS | 40.0% | |
| CCTTCTACTGAAAAGTCCTT+GGG | + | tig0027613:57780-57799 | Msa1435120:CDS | 40.0% | |
| CATTGAGTACAATACTCCTC+AGG | + | tig0027613:57812-57831 | Msa1435120:CDS | 40.0% | |
| !!! | GTTTTACCATCGGTTTGATG+AGG | + | tig0027613:57872-57891 | Msa1435120:intron | 40.0% |
| CTTGCTAAAGAGAAGACTCA+AGG | + | tig0027613:57927-57946 | Msa1435120:CDS | 40.0% | |
| GAAGACTCAAGGATACAAAC+TGG | + | tig0027613:57938-57957 | Msa1435120:CDS | 40.0% | |
| CAAACAAGGAATATGCTCCA+GGG | + | tig0027613:58042-58061 | Msa1435120:CDS | 40.0% | |
| AAACAAGGAATATGCTCCAG+GGG | + | tig0027613:58043-58062 | Msa1435120:CDS | 40.0% | |
| CTCCCATAATCCTAATAAGG+TGG | - | tig0027613:58115-58134 | None:intergenic | 40.0% | |
| GGTCTCCCATAATCCTAATA+AGG | - | tig0027613:58118-58137 | None:intergenic | 40.0% | |
| ACAATGGCTTACTGATGCTA+AGG | + | tig0027613:58423-58442 | Msa1435120:CDS | 40.0% | |
| ! | GTTCAGATACTGAGGTTTTG+TGG | + | tig0027613:58473-58492 | Msa1435120:CDS | 40.0% |
| AGCACGTTTATAAACAGGGT+CGG | - | tig0027613:58521-58540 | None:intergenic | 40.0% | |
| !! | ATATGTCTGTGGATTGGGCT+CGG | - | tig0027613:57089-57108 | None:intergenic | 45.0% |
| CAGCCAGGTTTAGTTGTTGA+CGG | - | tig0027613:57188-57207 | None:intergenic | 45.0% | |
| GGATTCTTACCGTTTACCGA+CGG | - | tig0027613:57213-57232 | None:intergenic | 45.0% | |
| TTAGCGTTGTCGCAGTGAAA+TGG | - | tig0027613:57331-57350 | None:intergenic | 45.0% | |
| GCGACAACGCTAAAGCTTTA+CGG | + | tig0027613:57338-57357 | Msa1435120:five_prime_UTR | 45.0% | |
| ATTGCGGTGGTGAGTGATTA+TGG | - | tig0027613:57366-57385 | None:intergenic | 45.0% | |
| CATTACATCCGCCATGATTG+CGG | - | tig0027613:57382-57401 | None:intergenic | 45.0% | |
| ! | CCCAAGGACTTTTCAGTAGA+AGG | - | tig0027613:57783-57802 | None:intergenic | 45.0% |
| CTCAATGAAGCAGTAACCCA+AGG | - | tig0027613:57799-57818 | None:intergenic | 45.0% | |
| ! | GCATATTCCTTGTTTGGAGG+AGG | - | tig0027613:58038-58057 | None:intergenic | 45.0% |
| ! | GGAGCATATTCCTTGTTTGG+AGG | - | tig0027613:58041-58060 | None:intergenic | 45.0% |
| CCTGGAGCATATTCCTTGTT+TGG | - | tig0027613:58044-58063 | None:intergenic | 45.0% | |
| CCAAACAAGGAATATGCTCC+AGG | + | tig0027613:58041-58060 | Msa1435120:CDS | 45.0% | |
| AACCAGCACGAATCACAAAC+TGG | - | tig0027613:58456-58475 | None:intergenic | 45.0% | |
| GCACGTTTATAAACAGGGTC+GGG | - | tig0027613:58520-58539 | None:intergenic | 45.0% | |
| !! | GGACGGAGAGTTTTGTACAA+TGG | + | tig0027613:58653-58672 | Msa1435120:CDS | 45.0% |
| GTCACCTTTGGGTACTTACT+TGG | + | tig0027613:58675-58694 | Msa1435120:CDS | 45.0% | |
| GTTGCCAAGTAAGTACCCAA+AGG | - | tig0027613:58682-58701 | None:intergenic | 45.0% | |
| GTAACGCATGAGACGATTGA+AGG | - | tig0027613:58746-58765 | None:intergenic | 45.0% | |
| !! | ATATGTCTGTGGATTGGGCT+CGG | - | tig0027613:57089-57108 | None:intergenic | 45.0% |
| CAGCCAGGTTTAGTTGTTGA+CGG | - | tig0027613:57188-57207 | None:intergenic | 45.0% | |
| GGATTCTTACCGTTTACCGA+CGG | - | tig0027613:57213-57232 | None:intergenic | 45.0% | |
| TTAGCGTTGTCGCAGTGAAA+TGG | - | tig0027613:57331-57350 | None:intergenic | 45.0% | |
| GCGACAACGCTAAAGCTTTA+CGG | + | tig0027613:57338-57357 | Msa1435120:five_prime_UTR | 45.0% | |
| ATTGCGGTGGTGAGTGATTA+TGG | - | tig0027613:57366-57385 | None:intergenic | 45.0% | |
| CATTACATCCGCCATGATTG+CGG | - | tig0027613:57382-57401 | None:intergenic | 45.0% | |
| ! | CCCAAGGACTTTTCAGTAGA+AGG | - | tig0027613:57783-57802 | None:intergenic | 45.0% |
| CTCAATGAAGCAGTAACCCA+AGG | - | tig0027613:57799-57818 | None:intergenic | 45.0% | |
| ! | GCATATTCCTTGTTTGGAGG+AGG | - | tig0027613:58038-58057 | None:intergenic | 45.0% |
| ! | GGAGCATATTCCTTGTTTGG+AGG | - | tig0027613:58041-58060 | None:intergenic | 45.0% |
| CCTGGAGCATATTCCTTGTT+TGG | - | tig0027613:58044-58063 | None:intergenic | 45.0% | |
| CCAAACAAGGAATATGCTCC+AGG | + | tig0027613:58041-58060 | Msa1435120:CDS | 45.0% | |
| AACCAGCACGAATCACAAAC+TGG | - | tig0027613:58456-58475 | None:intergenic | 45.0% | |
| GCACGTTTATAAACAGGGTC+GGG | - | tig0027613:58520-58539 | None:intergenic | 45.0% | |
| !! | GGACGGAGAGTTTTGTACAA+TGG | + | tig0027613:58653-58672 | Msa1435120:CDS | 45.0% |
| GTCACCTTTGGGTACTTACT+TGG | + | tig0027613:58675-58694 | Msa1435120:CDS | 45.0% | |
| GTTGCCAAGTAAGTACCCAA+AGG | - | tig0027613:58682-58701 | None:intergenic | 45.0% | |
| GTAACGCATGAGACGATTGA+AGG | - | tig0027613:58746-58765 | None:intergenic | 45.0% | |
| GGTTTGGAGGCTCTTCCAAA+TGG | - | tig0027613:57112-57131 | None:intergenic | 50.0% | |
| ATCGGTAGAGTTCAGCGCAA+CGG | - | tig0027613:57160-57179 | None:intergenic | 50.0% | |
| TAGTTGTTGACGGCGGCAAT+CGG | - | tig0027613:57178-57197 | None:intergenic | 50.0% | |
| CCAGGTTTAGTTGTTGACGG+CGG | - | tig0027613:57185-57204 | None:intergenic | 50.0% | |
| ATCACTCACCACCGCAATCA+TGG | + | tig0027613:57368-57387 | Msa1435120:exon | 50.0% | |
| GATTCCATTCACCTTCCTCC+AGG | + | tig0027613:57465-57484 | Msa1435120:CDS | 50.0% | |
| !! | TCATGAAAGTGCCAGACGAG+TGG | + | tig0027613:58009-58028 | Msa1435120:CDS | 50.0% |
| !! | CATGAAAGTGCCAGACGAGT+GGG | + | tig0027613:58010-58029 | Msa1435120:CDS | 50.0% |
| ACAACCAAGTAGCACGCAAG+TGG | - | tig0027613:58174-58193 | None:intergenic | 50.0% | |
| GACCAGTTTGTGATTCGTGC+TGG | + | tig0027613:58451-58470 | Msa1435120:CDS | 50.0% | |
| !! | TCGTGCTGGTTCAGATACTG+AGG | + | tig0027613:58465-58484 | Msa1435120:CDS | 50.0% |
| TTGGCAACAGTTCACCGTCA+GGG | + | tig0027613:58694-58713 | Msa1435120:CDS | 50.0% | |
| ACGCATGAGACGATTGAAGG+TGG | - | tig0027613:58743-58762 | None:intergenic | 50.0% | |
| GGTTTGGAGGCTCTTCCAAA+TGG | - | tig0027613:57112-57131 | None:intergenic | 50.0% | |
| ATCGGTAGAGTTCAGCGCAA+CGG | - | tig0027613:57160-57179 | None:intergenic | 50.0% | |
| TAGTTGTTGACGGCGGCAAT+CGG | - | tig0027613:57178-57197 | None:intergenic | 50.0% | |
| CCAGGTTTAGTTGTTGACGG+CGG | - | tig0027613:57185-57204 | None:intergenic | 50.0% | |
| ATCACTCACCACCGCAATCA+TGG | + | tig0027613:57368-57387 | Msa1435120:exon | 50.0% | |
| GATTCCATTCACCTTCCTCC+AGG | + | tig0027613:57465-57484 | Msa1435120:CDS | 50.0% | |
| !! | TCATGAAAGTGCCAGACGAG+TGG | + | tig0027613:58009-58028 | Msa1435120:CDS | 50.0% |
| !! | CATGAAAGTGCCAGACGAGT+GGG | + | tig0027613:58010-58029 | Msa1435120:CDS | 50.0% |
| ACAACCAAGTAGCACGCAAG+TGG | - | tig0027613:58174-58193 | None:intergenic | 50.0% | |
| GACCAGTTTGTGATTCGTGC+TGG | + | tig0027613:58451-58470 | Msa1435120:CDS | 50.0% | |
| !! | TCGTGCTGGTTCAGATACTG+AGG | + | tig0027613:58465-58484 | Msa1435120:CDS | 50.0% |
| TTGGCAACAGTTCACCGTCA+GGG | + | tig0027613:58694-58713 | Msa1435120:CDS | 50.0% | |
| ACGCATGAGACGATTGAAGG+TGG | - | tig0027613:58743-58762 | None:intergenic | 50.0% | |
| TCGGTAGAGTTCAGCGCAAC+GGG | - | tig0027613:57159-57178 | None:intergenic | 55.0% | |
| CCGCCGTCAACAACTAAACC+TGG | + | tig0027613:57182-57201 | Msa1435120:five_prime_UTR | 55.0% | |
| ACTAAACCTGGCTGTGCCGT+CGG | + | tig0027613:57194-57213 | Msa1435120:five_prime_UTR | 55.0% | |
| ACTCACCACCGCAATCATGG+CGG | + | tig0027613:57371-57390 | Msa1435120:exon | 55.0% | |
| TACATCCGCCATGATTGCGG+TGG | - | tig0027613:57379-57398 | None:intergenic | 55.0% | |
| GTCACCTGGAGGAAGGTGAA+TGG | - | tig0027613:57472-57491 | None:intergenic | 55.0% | |
| CTTCCTCCAGGTGACAACTG+CGG | + | tig0027613:57477-57496 | Msa1435120:CDS | 55.0% | |
| ATTCCGCAGTTGTCACCTGG+AGG | - | tig0027613:57483-57502 | None:intergenic | 55.0% | |
| AGGATTCCGCAGTTGTCACC+TGG | - | tig0027613:57486-57505 | None:intergenic | 55.0% | |
| GTGACAACTGCGGAATCCTC+AGG | + | tig0027613:57487-57506 | Msa1435120:CDS | 55.0% | |
| CTTGGCAACAGTTCACCGTC+AGG | + | tig0027613:58693-58712 | Msa1435120:CDS | 55.0% | |
| TGGCAACAGTTCACCGTCAG+GGG | + | tig0027613:58695-58714 | Msa1435120:CDS | 55.0% | |
| TCGGTAGAGTTCAGCGCAAC+GGG | - | tig0027613:57159-57178 | None:intergenic | 55.0% | |
| CCGCCGTCAACAACTAAACC+TGG | + | tig0027613:57182-57201 | Msa1435120:five_prime_UTR | 55.0% | |
| ACTAAACCTGGCTGTGCCGT+CGG | + | tig0027613:57194-57213 | Msa1435120:five_prime_UTR | 55.0% | |
| ACTCACCACCGCAATCATGG+CGG | + | tig0027613:57371-57390 | Msa1435120:exon | 55.0% | |
| TACATCCGCCATGATTGCGG+TGG | - | tig0027613:57379-57398 | None:intergenic | 55.0% | |
| GTCACCTGGAGGAAGGTGAA+TGG | - | tig0027613:57472-57491 | None:intergenic | 55.0% | |
| CTTCCTCCAGGTGACAACTG+CGG | + | tig0027613:57477-57496 | Msa1435120:CDS | 55.0% | |
| ATTCCGCAGTTGTCACCTGG+AGG | - | tig0027613:57483-57502 | None:intergenic | 55.0% | |
| AGGATTCCGCAGTTGTCACC+TGG | - | tig0027613:57486-57505 | None:intergenic | 55.0% | |
| GTGACAACTGCGGAATCCTC+AGG | + | tig0027613:57487-57506 | Msa1435120:CDS | 55.0% | |
| CTTGGCAACAGTTCACCGTC+AGG | + | tig0027613:58693-58712 | Msa1435120:CDS | 55.0% | |
| TGGCAACAGTTCACCGTCAG+GGG | + | tig0027613:58695-58714 | Msa1435120:CDS | 55.0% | |
| CGGTAGAGTTCAGCGCAACG+GGG | - | tig0027613:57158-57177 | None:intergenic | 60.0% | |
| CTGGCTGTGCCGTCGGTAAA+CGG | + | tig0027613:57201-57220 | Msa1435120:five_prime_UTR | 60.0% | |
| CGCAGTTGTCACCTGGAGGA+AGG | - | tig0027613:57479-57498 | None:intergenic | 60.0% | |
| GTGGGCTCCTCCTCCAAACA+AGG | + | tig0027613:58028-58047 | Msa1435120:CDS | 60.0% | |
| ! | GGCACCACTTGCGTGCTACT+TGG | + | tig0027613:58167-58186 | Msa1435120:intron | 60.0% |
| GGCAACAGTTCACCGTCAGG+GGG | + | tig0027613:58696-58715 | Msa1435120:CDS | 60.0% | |
| CGGTAGAGTTCAGCGCAACG+GGG | - | tig0027613:57158-57177 | None:intergenic | 60.0% | |
| CTGGCTGTGCCGTCGGTAAA+CGG | + | tig0027613:57201-57220 | Msa1435120:five_prime_UTR | 60.0% | |
| CGCAGTTGTCACCTGGAGGA+AGG | - | tig0027613:57479-57498 | None:intergenic | 60.0% | |
| GTGGGCTCCTCCTCCAAACA+AGG | + | tig0027613:58028-58047 | Msa1435120:CDS | 60.0% | |
| ! | GGCACCACTTGCGTGCTACT+TGG | + | tig0027613:58167-58186 | Msa1435120:intron | 60.0% |
| GGCAACAGTTCACCGTCAGG+GGG | + | tig0027613:58696-58715 | Msa1435120:CDS | 60.0% | |
| CGTTTACCGACGGCACAGCC+AGG | - | tig0027613:57203-57222 | None:intergenic | 65.0% | |
| ACCGTCAGGGGGCAGCAGTT+TGG | + | tig0027613:58707-58726 | Msa1435120:CDS | 65.0% | |
| CCCAAACTGCTGCCCCCTGA+CGG | - | tig0027613:58711-58730 | None:intergenic | 65.0% | |
| CCGTCAGGGGGCAGCAGTTT+GGG | + | tig0027613:58708-58727 | Msa1435120:CDS | 65.0% | |
| CGTCAGGGGGCAGCAGTTTG+GGG | + | tig0027613:58709-58728 | Msa1435120:CDS | 65.0% | |
| CGTTTACCGACGGCACAGCC+AGG | - | tig0027613:57203-57222 | None:intergenic | 65.0% | |
| ACCGTCAGGGGGCAGCAGTT+TGG | + | tig0027613:58707-58726 | Msa1435120:CDS | 65.0% | |
| CCCAAACTGCTGCCCCCTGA+CGG | - | tig0027613:58711-58730 | None:intergenic | 65.0% | |
| CCGTCAGGGGGCAGCAGTTT+GGG | + | tig0027613:58708-58727 | Msa1435120:CDS | 65.0% | |
| CGTCAGGGGGCAGCAGTTTG+GGG | + | tig0027613:58709-58728 | Msa1435120:CDS | 65.0% | |
| GGAGGAGGAGCCCACTCGTC+TGG | - | tig0027613:58023-58042 | None:intergenic | 70.0% | |
| CAGGGGGCAGCAGTTTGGGG+AGG | + | tig0027613:58712-58731 | Msa1435120:CDS | 70.0% | |
| GGAGGAGGAGCCCACTCGTC+TGG | - | tig0027613:58023-58042 | None:intergenic | 70.0% | |
| CAGGGGGCAGCAGTTTGGGG+AGG | + | tig0027613:58712-58731 | Msa1435120:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027613 | gene | 57086 | 58777 | 57086 | ID=Msa1435120;Name=Msa1435120 |
| tig0027613 | mRNA | 57086 | 58777 | 57086 | ID=Msa1435120-mRNA-1;Parent=Msa1435120;Name=Msa1435120-mRNA-1;_AED=0.00;_eAED=0.00;_QI=199|1|1|1|0.8|0.66|6|0|255 |
| tig0027613 | exon | 57086 | 57222 | 57086 | ID=Msa1435120-mRNA-1:exon:9465;Parent=Msa1435120-mRNA-1 |
| tig0027613 | exon | 57325 | 57508 | 57325 | ID=Msa1435120-mRNA-1:exon:9466;Parent=Msa1435120-mRNA-1 |
| tig0027613 | exon | 57596 | 57833 | 57596 | ID=Msa1435120-mRNA-1:exon:9467;Parent=Msa1435120-mRNA-1 |
| tig0027613 | exon | 57918 | 58064 | 57918 | ID=Msa1435120-mRNA-1:exon:9468;Parent=Msa1435120-mRNA-1 |
| tig0027613 | exon | 58412 | 58540 | 58412 | ID=Msa1435120-mRNA-1:exon:9469;Parent=Msa1435120-mRNA-1 |
| tig0027613 | exon | 58649 | 58777 | 58649 | ID=Msa1435120-mRNA-1:exon:9470;Parent=Msa1435120-mRNA-1 |
| tig0027613 | five_prime_UTR | 57086 | 57222 | 57086 | ID=Msa1435120-mRNA-1:five_prime_utr;Parent=Msa1435120-mRNA-1 |
| tig0027613 | five_prime_UTR | 57325 | 57386 | 57325 | ID=Msa1435120-mRNA-1:five_prime_utr;Parent=Msa1435120-mRNA-1 |
| tig0027613 | CDS | 57387 | 57508 | 57387 | ID=Msa1435120-mRNA-1:cds;Parent=Msa1435120-mRNA-1 |
| tig0027613 | CDS | 57596 | 57833 | 57596 | ID=Msa1435120-mRNA-1:cds;Parent=Msa1435120-mRNA-1 |
| tig0027613 | CDS | 57918 | 58064 | 57918 | ID=Msa1435120-mRNA-1:cds;Parent=Msa1435120-mRNA-1 |
| tig0027613 | CDS | 58412 | 58540 | 58412 | ID=Msa1435120-mRNA-1:cds;Parent=Msa1435120-mRNA-1 |
| tig0027613 | CDS | 58649 | 58777 | 58649 | ID=Msa1435120-mRNA-1:cds;Parent=Msa1435120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
