Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0378410 | XP_003602674.1 | 99.445 | 721 | 4 | 0 | 1 | 721 | 1 | 721 | 0.0 | 1497 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0378410 | sp|Q9FN05|PSL5_ARATH | 75.479 | 730 | 166 | 7 | 4 | 721 | 2 | 730 | 0.0 | 1181 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0378410 | G7JC76 | 99.445 | 721 | 4 | 0 | 1 | 721 | 1 | 721 | 0.0 | 1497 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0177110 | Msa0378410 | 0.817362 | 3.429456e-52 | -8.615850e-47 |
Msa0216580 | Msa0378410 | 0.813464 | 2.525659e-51 | -8.615850e-47 |
Msa0378410 | Msa0382690 | 0.845539 | 3.813292e-59 | -8.615850e-47 |
Msa0378410 | Msa0386300 | 0.803905 | 2.788680e-49 | -8.615850e-47 |
Msa0378410 | Msa0427760 | 0.835990 | 1.216376e-56 | -8.615850e-47 |
Msa0378410 | Msa0427950 | 0.851825 | 6.895808e-61 | -8.615850e-47 |
Msa0378410 | Msa0447440 | 0.804025 | 2.633463e-49 | -8.615850e-47 |
Msa0378410 | Msa0523650 | 0.836791 | 7.608354e-57 | -8.615850e-47 |
Msa0378410 | Msa0538740 | 0.810998 | 8.720081e-51 | -8.615850e-47 |
Msa0378410 | Msa0539010 | 0.800554 | 1.365079e-48 | -8.615850e-47 |
Msa0378410 | Msa0573100 | 0.833039 | 6.705009e-56 | -8.615850e-47 |
Msa0378410 | Msa0704590 | 0.831415 | 1.690781e-55 | -8.615850e-47 |
Msa0378410 | Msa1040110 | 0.831773 | 1.380239e-55 | -8.615850e-47 |
Msa0378410 | Msa1083420 | 0.863763 | 1.973064e-64 | -8.615850e-47 |
Msa0378410 | Msa1128170 | 0.826832 | 2.184962e-54 | -8.615850e-47 |
Msa0378410 | Msa1154680 | 0.820196 | 7.793075e-53 | -8.615850e-47 |
Msa0378410 | Msa1165370 | 0.812146 | 4.910495e-51 | -8.615850e-47 |
Msa0378410 | Msa1215020 | 0.800400 | 1.467120e-48 | -8.615850e-47 |
Msa0378410 | Msa1256070 | 0.830875 | 2.294891e-55 | -8.615850e-47 |
Msa0378410 | Msa1279490 | 0.850982 | 1.193507e-60 | -8.615850e-47 |
Msa0378410 | Msa1296250 | 0.824583 | 7.462174e-54 | -8.615850e-47 |
Msa0378410 | Msa1300950 | 0.868037 | 8.793938e-66 | -8.615850e-47 |
Msa0378410 | Msa1331970 | 0.809842 | 1.549225e-50 | -8.615850e-47 |
Msa0378410 | Msa1377960 | 0.807720 | 4.403812e-50 | -8.615850e-47 |
Msa0378410 | Msa1381100 | 0.887121 | 1.883941e-72 | -8.615850e-47 |
Msa0378410 | Msa1427050 | 0.834879 | 2.321948e-56 | -8.615850e-47 |
Msa0378410 | Msa1435120 | 0.806125 | 9.572369e-50 | -8.615850e-47 |
Msa0378410 | Msa1443000 | 0.827694 | 1.358277e-54 | -8.615850e-47 |
Msa0334270 | Msa0378410 | 0.814083 | 1.845745e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0378410 | MtrunA17_Chr3g0130691 | 99.445 | 721 | 4 | 0 | 1 | 721 | 1 | 721 | 0.0 | 1497 |
Msa0378410 | MtrunA17_Chr5g0409111 | 39.433 | 388 | 225 | 4 | 333 | 714 | 244 | 627 | 1.83e-88 | 300 |
Msa0378410 | MtrunA17_Chr2g0293101 | 34.572 | 538 | 283 | 16 | 217 | 718 | 200 | 704 | 2.21e-82 | 280 |
Msa0378410 | MtrunA17_Chr2g0293111 | 33.952 | 539 | 285 | 16 | 217 | 718 | 200 | 704 | 9.29e-81 | 276 |
Msa0378410 | MtrunA17_Chr1g0209901 | 29.064 | 609 | 338 | 13 | 173 | 721 | 144 | 718 | 2.02e-78 | 270 |
Msa0378410 | MtrunA17_Chr5g0423841 | 29.821 | 560 | 300 | 11 | 217 | 718 | 188 | 712 | 1.31e-76 | 265 |
Msa0378410 | MtrunA17_Chr1g0209911 | 28.943 | 615 | 336 | 15 | 173 | 718 | 141 | 723 | 2.00e-73 | 256 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0378410 | AT5G63840.2 | 75.479 | 730 | 166 | 7 | 4 | 721 | 29 | 757 | 0.0 | 1181 |
Msa0378410 | AT5G63840.1 | 75.479 | 730 | 166 | 7 | 4 | 721 | 2 | 730 | 0.0 | 1181 |
Msa0378410 | AT3G23640.2 | 41.237 | 388 | 218 | 5 | 333 | 714 | 178 | 561 | 2.79e-95 | 317 |
Msa0378410 | AT3G23640.1 | 41.237 | 388 | 218 | 5 | 333 | 714 | 178 | 561 | 2.79e-95 | 317 |
Msa0378410 | AT3G23640.3 | 41.237 | 388 | 218 | 5 | 333 | 714 | 247 | 630 | 4.39e-95 | 318 |
Msa0378410 | AT3G45940.1 | 31.385 | 650 | 377 | 20 | 87 | 721 | 61 | 656 | 3.01e-81 | 277 |
Msa0378410 | AT5G11720.1 | 29.912 | 682 | 379 | 21 | 74 | 715 | 71 | 693 | 7.76e-77 | 265 |
Msa0378410 | AT1G68560.1 | 29.498 | 617 | 337 | 13 | 160 | 718 | 125 | 701 | 1.11e-74 | 259 |
Find 219 sgRNAs with CRISPR-Local
Find 728 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATGAATCGGGTTGGGATTT+GGG | 0.134779 | 3_1:-79167643 | None:intergenic |
ACCTTATAGATTATTCAATT+TGG | 0.164971 | 3_1:+79168170 | Msa0378410:CDS |
AATGAACCTTCTGTCTTTAA+TGG | 0.175554 | 3_1:+79168960 | Msa0378410:CDS |
TTTAAATAATTTCATTTCTT+TGG | 0.190102 | 3_1:-79167279 | None:intergenic |
TGATGAATCGGGTTGGGATT+TGG | 0.206266 | 3_1:-79167644 | None:intergenic |
GAATAAACCGTGTGAGTTAA+TGG | 0.206560 | 3_1:-79167944 | None:intergenic |
GATTCGCCGTTTGGACTTTA+TGG | 0.209699 | 3_1:+79168213 | Msa0378410:CDS |
GAGCTTACTATCCTTTCTTT+AGG | 0.210300 | 3_1:+79170465 | Msa0378410:CDS |
CTGAATAATGTGTAGTAATA+TGG | 0.225988 | 3_1:-79171130 | None:intergenic |
TTCCTGTGGCCCGTCCATTA+TGG | 0.250007 | 3_1:+79171173 | Msa0378410:CDS |
CGGGTTGGGATTTGGGGATT+AGG | 0.258704 | 3_1:-79167636 | None:intergenic |
CATATTACTACACATTATTC+AGG | 0.265304 | 3_1:+79171131 | Msa0378410:CDS |
TTCTGCATCTCCTCAGGATT+AGG | 0.269078 | 3_1:-79168669 | None:intergenic |
ATACTTTGAACCCTGAAATT+AGG | 0.277877 | 3_1:+79168862 | Msa0378410:CDS |
CCTAGAGATGCCTTACATTA+TGG | 0.279850 | 3_1:+79169997 | Msa0378410:CDS |
AGCTTACTATCCTTTCTTTA+GGG | 0.283037 | 3_1:+79170466 | Msa0378410:CDS |
GCCCACCATGACCTAATTTC+AGG | 0.288180 | 3_1:-79168873 | None:intergenic |
TCCAAATTGAATAATCTATA+AGG | 0.298183 | 3_1:-79168171 | None:intergenic |
GGGGACGTGGAAGCGTTTCT+TGG | 0.305717 | 3_1:-79167746 | None:intergenic |
TAGCAATGATGAAGCTTTCA+TGG | 0.309226 | 3_1:+79171225 | Msa0378410:CDS |
TGAGGAGATGCAGAAGAAAT+TGG | 0.309639 | 3_1:+79168677 | Msa0378410:CDS |
CGCAAGACTCGTAGCATGTT+CGG | 0.315746 | 3_1:-79168109 | None:intergenic |
GGTTCAGATTCTTCAACATT+AGG | 0.316196 | 3_1:-79168150 | None:intergenic |
GTCAAAGGTATGGTGCAATT+TGG | 0.316892 | 3_1:+79170151 | Msa0378410:CDS |
AGACGAGAACCATGGTTGTT+TGG | 0.320713 | 3_1:+79170512 | Msa0378410:CDS |
ATTCGGACAGTTGAAGAAAC+TGG | 0.322367 | 3_1:-79167378 | None:intergenic |
TATATTCACGATTCGCCGTT+TGG | 0.322641 | 3_1:+79168204 | Msa0378410:CDS |
TCTGCATCTCCTCAGGATTA+GGG | 0.330890 | 3_1:-79168668 | None:intergenic |
CAACTCCTTCACTTTACATA+TGG | 0.333448 | 3_1:+79168928 | Msa0378410:CDS |
ACGGAATTCATCTTTCTTCC+AGG | 0.334407 | 3_1:-79167506 | None:intergenic |
CAAATTGATGTTCTTGCCTC+TGG | 0.334832 | 3_1:+79168312 | Msa0378410:CDS |
GACGAGAACCATGGTTGTTT+GGG | 0.347906 | 3_1:+79170513 | Msa0378410:CDS |
ATCGAGCGCGTTTGCAGAAT+GGG | 0.352415 | 3_1:-79167543 | None:intergenic |
TGCACCATACCTTTGACTTC+CGG | 0.354799 | 3_1:-79170145 | None:intergenic |
TCTGGTTGGGATGCTGAGTC+GGG | 0.361126 | 3_1:+79168330 | Msa0378410:CDS |
CGCGTTTGCAGAATGGGGTT+TGG | 0.362668 | 3_1:-79167537 | None:intergenic |
TACTGTCTCAAAACATCTTT+CGG | 0.368792 | 3_1:-79168444 | None:intergenic |
AACGGAGAGAGTGAGGAGTA+AGG | 0.369755 | 3_1:-79167671 | None:intergenic |
CTCTGGTTGGGATGCTGAGT+CGG | 0.373274 | 3_1:+79168329 | Msa0378410:CDS |
GCAAGACTCGTAGCATGTTC+GGG | 0.375254 | 3_1:-79168108 | None:intergenic |
TGATGTTCTTGCCTCTGGTT+GGG | 0.376419 | 3_1:+79168317 | Msa0378410:CDS |
TTTGATGGTTGGTGCTGGCC+TGG | 0.381957 | 3_1:+79168822 | Msa0378410:CDS |
CCTTAGAGTTTCAGTTCCTA+TGG | 0.386371 | 3_1:+79170203 | Msa0378410:CDS |
CGCTTCCTACTTCACAGAAT+AGG | 0.387393 | 3_1:+79168358 | Msa0378410:CDS |
CCATAGGAACTGAAACTCTA+AGG | 0.387748 | 3_1:-79170203 | None:intergenic |
CGCGCTCGATCTCGCTCCCC+TGG | 0.388774 | 3_1:+79167556 | Msa0378410:CDS |
AAGGATAGTAAGCTCCTAAC+TGG | 0.391124 | 3_1:-79170457 | None:intergenic |
TTCTTCAACATTAGGTCCTC+TGG | 0.392148 | 3_1:-79168142 | None:intergenic |
AATTGCGAAACGACGACGTC+GGG | 0.395712 | 3_1:-79167766 | None:intergenic |
AATGTCATAGCAAATGAATC+TGG | 0.397919 | 3_1:-79167417 | None:intergenic |
CGGGAGTTGCATAATGCCTA+TGG | 0.401865 | 3_1:+79170033 | Msa0378410:CDS |
GCCTGGTTCTTCGTCCTATC+CGG | 0.415792 | 3_1:+79168839 | Msa0378410:CDS |
GATGGGAATTCCATCCATAA+TGG | 0.417412 | 3_1:-79171187 | None:intergenic |
TGCTGCTGTGACGGGAGGTT+CGG | 0.417549 | 3_1:+79168467 | Msa0378410:CDS |
AATTTCTTCTGCATCTCCTC+AGG | 0.424390 | 3_1:-79168675 | None:intergenic |
GCAGAAGAAATTGGATGGTA+AGG | 0.427842 | 3_1:+79168686 | Msa0378410:CDS |
ATGGGGTTTGGTTACAGTTA+CGG | 0.428860 | 3_1:-79167525 | None:intergenic |
TCTGCACCACCGTCTTCTCC+TGG | 0.429847 | 3_1:+79167488 | Msa0378410:CDS |
TTGTCAAGAGCATTGTTTGC+CGG | 0.430107 | 3_1:+79170126 | Msa0378410:CDS |
ATTTCAGGGTTCAAAGTATC+CGG | 0.434571 | 3_1:-79168858 | None:intergenic |
TGGCGATAACTCTGCCGATT+GGG | 0.437132 | 3_1:+79170176 | Msa0378410:CDS |
GAATCCGGATCCTGAGTTAT+TGG | 0.438991 | 3_1:+79170424 | Msa0378410:CDS |
CATAAGGAGGCGTCAGAGAA+AGG | 0.439593 | 3_1:+79168768 | Msa0378410:CDS |
TTGGTCCGCTGGTACCAGTT+AGG | 0.441983 | 3_1:+79170443 | Msa0378410:CDS |
GGAGTGTGAAACGCAGCGTT+TGG | 0.445742 | 3_1:-79167456 | None:intergenic |
TTCTCATCTCTCTTAATATG+AGG | 0.450608 | 3_1:-79168735 | None:intergenic |
AGTATTTCAATTTGTTAATG+TGG | 0.454576 | 3_1:+79167308 | Msa0378410:five_prime_UTR |
GCGATGAGGTCAGAGGAACC+AGG | 0.455429 | 3_1:-79167574 | None:intergenic |
GAAATGAAGGTGTAAAGATT+CGG | 0.458505 | 3_1:-79167395 | None:intergenic |
GGATTTGGGGATTAGGTTAG+CGG | 0.459204 | 3_1:-79167629 | None:intergenic |
TCAAGCCACAAAACATCATA+AGG | 0.466368 | 3_1:-79168594 | None:intergenic |
TTGATGTTCTTGCCTCTGGT+TGG | 0.466971 | 3_1:+79168316 | Msa0378410:CDS |
ACGGAGAGAGTGAGGAGTAA+GGG | 0.468845 | 3_1:-79167670 | None:intergenic |
AATGCTCTTGACAAAACAAA+TGG | 0.469678 | 3_1:-79170117 | None:intergenic |
TGAATAATGTGTAGTAATAT+GGG | 0.470573 | 3_1:-79171129 | None:intergenic |
CTAAAAGTAGTTTCATCAGA+TGG | 0.473918 | 3_1:-79171205 | None:intergenic |
GATCGAGCGCGTTTGCAGAA+TGG | 0.475419 | 3_1:-79167544 | None:intergenic |
ATGAATCGGGTTGGGATTTG+GGG | 0.477583 | 3_1:-79167642 | None:intergenic |
TTATGGAGGTGTGGAACATC+GGG | 0.480881 | 3_1:+79170014 | Msa0378410:CDS |
TTCAGGGAGGCTAACACTAC+TGG | 0.488005 | 3_1:+79171148 | Msa0378410:CDS |
GATGCGTGGAAGCCAGAGTT+TGG | 0.489159 | 3_1:-79167797 | None:intergenic |
TTCCACATGGCAACATCTGA+AGG | 0.489273 | 3_1:+79170063 | Msa0378410:CDS |
GCAAATGAATCTGGAAATGA+AGG | 0.495647 | 3_1:-79167408 | None:intergenic |
AACTCTAAGGTGATCCCAAT+CGG | 0.496052 | 3_1:-79170190 | None:intergenic |
CCCACCATGACCTAATTTCA+GGG | 0.496996 | 3_1:-79168872 | None:intergenic |
TTCCACACCTCCATAATGTA+AGG | 0.497951 | 3_1:-79170007 | None:intergenic |
GTATTTCAATTTGTTAATGT+GGG | 0.500400 | 3_1:+79167309 | Msa0378410:five_prime_UTR |
ATGATGAAGCTTTCATGGTC+GGG | 0.502509 | 3_1:+79171230 | Msa0378410:CDS |
CTGGCGATAACTCTGCCGAT+TGG | 0.505985 | 3_1:+79170175 | Msa0378410:CDS |
GGGCTATTGAAGCGTGGTGA+AGG | 0.510307 | 3_1:+79170084 | Msa0378410:CDS |
ATCCATAATGGACGGGCCAC+AGG | 0.511367 | 3_1:-79171175 | None:intergenic |
CGGACCAATAACTCAGGATC+CGG | 0.511805 | 3_1:-79170428 | None:intergenic |
AAACGACGACGTCGGGGACG+TGG | 0.511862 | 3_1:-79167759 | None:intergenic |
GCGACGATAACTCCGGCGAC+CGG | 0.512572 | 3_1:+79167914 | Msa0378410:CDS |
CTTACCGGGATGTCATTCTC+TGG | 0.513239 | 3_1:+79170240 | Msa0378410:CDS |
TAAAAGTAGTTTCATCAGAT+GGG | 0.521520 | 3_1:-79171204 | None:intergenic |
AATGGAAATTACCCGGTCGC+CGG | 0.522729 | 3_1:-79167926 | None:intergenic |
CGGTGGTGCAGAGAAGAAGA+AGG | 0.524576 | 3_1:-79167477 | None:intergenic |
TCAATCCTATTCTGTGAAGT+AGG | 0.526238 | 3_1:-79168363 | None:intergenic |
TCCGGATAGGACGAAGAACC+AGG | 0.528174 | 3_1:-79168840 | None:intergenic |
ATGCAGGTGCTGATGTTGGT+GGG | 0.530016 | 3_1:+79170393 | Msa0378410:intron |
ATCCTGAGTTATTGGTCCGC+TGG | 0.532185 | 3_1:+79170432 | Msa0378410:CDS |
ATCTTTCTTCCAGGAGAAGA+CGG | 0.532274 | 3_1:-79167497 | None:intergenic |
TATGCAGGTGCTGATGTTGG+TGG | 0.533517 | 3_1:+79170392 | Msa0378410:intron |
CTTTATGCAGGTGCTGATGT+TGG | 0.536882 | 3_1:+79170389 | Msa0378410:intron |
ATTATGGAGGTGTGGAACAT+CGG | 0.537541 | 3_1:+79170013 | Msa0378410:CDS |
CGCCGTCGGAGATGGTGACG+TGG | 0.543538 | 3_1:-79167600 | None:intergenic |
GAGGATTCCGTCTTGATGAA+CGG | 0.544937 | 3_1:-79167689 | None:intergenic |
TCGCGGATGAAAAGCTCAAA+CGG | 0.545435 | 3_1:-79167895 | None:intergenic |
TTACCGTGAGAAAGCATGAA+TGG | 0.545594 | 3_1:-79168243 | None:intergenic |
AGACAGTATGCTGCTGTGAC+GGG | 0.546605 | 3_1:+79168459 | Msa0378410:CDS |
CGACGATAACTCCGGCGACC+GGG | 0.547881 | 3_1:+79167915 | Msa0378410:CDS |
TGCTTTCTCACGGTAAAGCG+AGG | 0.548776 | 3_1:+79168250 | Msa0378410:CDS |
GGTGAGATCGCCGTCGGAGA+TGG | 0.548882 | 3_1:-79167608 | None:intergenic |
CATTGTTTGCCGGAAGTCAA+AGG | 0.551007 | 3_1:+79170136 | Msa0378410:CDS |
ATCGAACCATAAAGTCCAAA+CGG | 0.554045 | 3_1:-79168219 | None:intergenic |
TTGAACATACTGACGGGAAG+AGG | 0.554859 | 3_1:+79168619 | Msa0378410:CDS |
CAGAAGAAATTGGATGGTAA+GGG | 0.556625 | 3_1:+79168687 | Msa0378410:CDS |
CAGTGGCTTATCATCAGTGT+CGG | 0.556818 | 3_1:+79168508 | Msa0378410:CDS |
ACATCGAAGCTAATCGATTG+AGG | 0.557812 | 3_1:-79168051 | None:intergenic |
TGGGCATGGGCCCTAAAGAA+AGG | 0.558231 | 3_1:-79170476 | None:intergenic |
ATAAGGAGGCGTCAGAGAAA+GGG | 0.558293 | 3_1:+79168769 | Msa0378410:CDS |
GACGTGGAAGCGTTTCTTGG+AGG | 0.558478 | 3_1:-79167743 | None:intergenic |
CCATAATGTAAGGCATCTCT+AGG | 0.560102 | 3_1:-79169997 | None:intergenic |
TGTGGCCCGTCCATTATGGA+TGG | 0.560447 | 3_1:+79171177 | Msa0378410:CDS |
AGGTATGGTGCAATTTGGAC+TGG | 0.562978 | 3_1:+79170156 | Msa0378410:CDS |
ATATTACTACACATTATTCA+GGG | 0.564087 | 3_1:+79171132 | Msa0378410:CDS |
AGCGTGGTGAAGGGAAAGAC+AGG | 0.566529 | 3_1:+79170094 | Msa0378410:CDS |
ACCATCAAAATCATTCCCAC+TGG | 0.568217 | 3_1:-79168808 | None:intergenic |
CTCAAAACATCTTTCGGCCG+CGG | 0.570734 | 3_1:-79168438 | None:intergenic |
AATGATGAAGCTTTCATGGT+CGG | 0.573210 | 3_1:+79171229 | Msa0378410:CDS |
GGCTATTGAAGCGTGGTGAA+GGG | 0.573501 | 3_1:+79170085 | Msa0378410:CDS |
TCTTCTGTTTACCTCTCCGA+CGG | 0.573516 | 3_1:+79167847 | Msa0378410:CDS |
GAATTCCATCCATAATGGAC+GGG | 0.576160 | 3_1:-79171182 | None:intergenic |
TGGAAGCCAGAGTTTGGTGT+TGG | 0.577370 | 3_1:-79167791 | None:intergenic |
TCAACATTAGGTCCTCTGGT+AGG | 0.577930 | 3_1:-79168138 | None:intergenic |
GAGAGGTAAACAGAAGAAGA+AGG | 0.578720 | 3_1:-79167841 | None:intergenic |
ATTCCATTCATGCTTTCTCA+CGG | 0.579812 | 3_1:+79168240 | Msa0378410:CDS |
AGACCAAGGGTCAAAACCAT+AGG | 0.581886 | 3_1:-79170219 | None:intergenic |
GAGACAGTATGCTGCTGTGA+CGG | 0.582246 | 3_1:+79168458 | Msa0378410:CDS |
AATTCGCCAACACCAAACTC+TGG | 0.582448 | 3_1:+79167785 | Msa0378410:CDS |
TTCATCCGCGACGATAACTC+CGG | 0.582976 | 3_1:+79167907 | Msa0378410:CDS |
TTCTGTCTTTAATGGTCCCG+AGG | 0.592528 | 3_1:+79168968 | Msa0378410:CDS |
TTTGCCGGAAGTCAAAGGTA+TGG | 0.592991 | 3_1:+79170141 | Msa0378410:CDS |
CTAATCGATTGAGGACCGTA+TGG | 0.593256 | 3_1:-79168042 | None:intergenic |
GGAATTCCATCCATAATGGA+CGG | 0.594012 | 3_1:-79171183 | None:intergenic |
TCCACATGGCAACATCTGAA+GGG | 0.595054 | 3_1:+79170064 | Msa0378410:CDS |
AGAGAAAGGGTATTACACTA+AGG | 0.595632 | 3_1:+79168782 | Msa0378410:CDS |
AGGGAAAAGAACTCTATCCC+AGG | 0.596886 | 3_1:-79168649 | None:intergenic |
GGATGGTAAGGGAAGGCGCA+TGG | 0.598327 | 3_1:+79168698 | Msa0378410:CDS |
GTCGGAGATGGTGACGTGGG+TGG | 0.599244 | 3_1:-79167596 | None:intergenic |
AGGGTTCAAAGTATCCGGAT+AGG | 0.599330 | 3_1:-79168853 | None:intergenic |
CCCTGAAATTAGGTCATGGT+GGG | 0.601724 | 3_1:+79168872 | Msa0378410:CDS |
TAACACTACTGGCGTTCCTG+TGG | 0.602036 | 3_1:+79171159 | Msa0378410:CDS |
TGCCTTACATTATGGAGGTG+TGG | 0.604146 | 3_1:+79170005 | Msa0378410:CDS |
GCTTTCTCACGGTAAAGCGA+GGG | 0.604214 | 3_1:+79168251 | Msa0378410:CDS |
CTTGATGAACGGAGAGAGTG+AGG | 0.605322 | 3_1:-79167678 | None:intergenic |
CTGGTTGGGATGCTGAGTCG+GGG | 0.606679 | 3_1:+79168331 | Msa0378410:CDS |
ATTGCCTCAGATGTTTGCAG+TGG | 0.609867 | 3_1:+79168491 | Msa0378410:CDS |
GAGATGCAGAAGAAATTGGA+TGG | 0.611153 | 3_1:+79168681 | Msa0378410:CDS |
ACTCTCTCCGTTCATCAAGA+CGG | 0.611386 | 3_1:+79167682 | Msa0378410:CDS |
TTGATATTGAACATACTGAC+GGG | 0.614044 | 3_1:+79168613 | Msa0378410:CDS |
TGGCTTATCATCAGTGTCGG+TGG | 0.615270 | 3_1:+79168511 | Msa0378410:CDS |
TGAACCCTGAAATTAGGTCA+TGG | 0.615595 | 3_1:+79168868 | Msa0378410:CDS |
GGGAGTTGCATAATGCCTAT+GGG | 0.616936 | 3_1:+79170034 | Msa0378410:CDS |
ATGACATCCCGGTAAGACCA+AGG | 0.617088 | 3_1:-79170233 | None:intergenic |
CAATCCTACCCAAACAACCA+TGG | 0.619331 | 3_1:-79170521 | None:intergenic |
TTCGGACAGTTGAAGAAACT+GGG | 0.619703 | 3_1:-79167377 | None:intergenic |
ACGATGTGGATGAGTGAAGC+TGG | 0.621631 | 3_1:+79168387 | Msa0378410:CDS |
TCATTCCATATGTAAAGTGA+AGG | 0.622943 | 3_1:-79168933 | None:intergenic |
TCGAGCGCGTTTGCAGAATG+GGG | 0.625028 | 3_1:-79167542 | None:intergenic |
CTGACCAGAGAATGACATCC+CGG | 0.629437 | 3_1:-79170244 | None:intergenic |
CGATGAGGTCAGAGGAACCA+GGG | 0.629720 | 3_1:-79167573 | None:intergenic |
AGAATAGGATTGATACGATG+TGG | 0.630262 | 3_1:+79168373 | Msa0378410:CDS |
CTTGATATTGAACATACTGA+CGG | 0.633927 | 3_1:+79168612 | Msa0378410:CDS |
CATGTGGAAGTAATACCCAT+AGG | 0.636522 | 3_1:-79170049 | None:intergenic |
CGACTCAGCATCCCAACCAG+AGG | 0.644514 | 3_1:-79168328 | None:intergenic |
TCGGGACCATTAAAGACAGA+AGG | 0.645847 | 3_1:-79168966 | None:intergenic |
CAGTATGCTGCTGTGACGGG+AGG | 0.646123 | 3_1:+79168462 | Msa0378410:CDS |
TGACATCCCGGTAAGACCAA+GGG | 0.646199 | 3_1:-79170232 | None:intergenic |
CTATGGGTATTACTTCCACA+TGG | 0.648812 | 3_1:+79170050 | Msa0378410:CDS |
CATACTGACAAAAGACCATA+CGG | 0.649468 | 3_1:+79168027 | Msa0378410:CDS |
CTTTCTCACGGTAAAGCGAG+GGG | 0.650585 | 3_1:+79168252 | Msa0378410:CDS |
TCGGTGGAATTATCGTGATG+AGG | 0.651398 | 3_1:+79168527 | Msa0378410:CDS |
ACCCACGTCACCATCTCCGA+CGG | 0.652401 | 3_1:+79167598 | Msa0378410:CDS |
TGGTGACGTGGGTGGCGATG+AGG | 0.653016 | 3_1:-79167588 | None:intergenic |
GTGGAATTATCGTGATGAGG+AGG | 0.653073 | 3_1:+79168530 | Msa0378410:CDS |
CAGCGGAGTAACCGTCGGAG+AGG | 0.653810 | 3_1:-79167858 | None:intergenic |
GTGGGTGGCGATGAGGTCAG+AGG | 0.654540 | 3_1:-79167581 | None:intergenic |
TATTACACTAAGGATTCCAG+TGG | 0.658554 | 3_1:+79168792 | Msa0378410:CDS |
GTAATTTCCATTAACTCACA+CGG | 0.658766 | 3_1:+79167937 | Msa0378410:CDS |
GAATTGCGAAACGACGACGT+CGG | 0.659072 | 3_1:-79167767 | None:intergenic |
GCCGTCGGAGATGGTGACGT+GGG | 0.660744 | 3_1:-79167599 | None:intergenic |
AAGGCGCATGGTTACCATCG+TGG | 0.662768 | 3_1:+79168710 | Msa0378410:CDS |
GTGAGTTAATGGAAATTACC+CGG | 0.663130 | 3_1:-79167933 | None:intergenic |
AGAAATTGGATGGTAAGGGA+AGG | 0.663197 | 3_1:+79168691 | Msa0378410:CDS |
TAAGCCACTGCAAACATCTG+AGG | 0.665748 | 3_1:-79168495 | None:intergenic |
ACCCTGAAATTAGGTCATGG+TGG | 0.666262 | 3_1:+79168871 | Msa0378410:CDS |
TACCAGCGGACCAATAACTC+AGG | 0.667995 | 3_1:-79170434 | None:intergenic |
AGAGATGCCTTACATTATGG+AGG | 0.668919 | 3_1:+79170000 | Msa0378410:CDS |
GCCCTTCAGATGTTGCCATG+TGG | 0.669777 | 3_1:-79170065 | None:intergenic |
ATTGCGAAACGACGACGTCG+GGG | 0.669976 | 3_1:-79167765 | None:intergenic |
AAAGCTCAAACGGATCGTGA+CGG | 0.671159 | 3_1:-79167885 | None:intergenic |
TTTCGTCGATGATGAGACGG+AGG | 0.671891 | 3_1:-79167708 | None:intergenic |
AGATCTTCTGAATTGATGCG+TGG | 0.687594 | 3_1:-79167811 | None:intergenic |
GATGAGGTCAGAGGAACCAG+GGG | 0.688817 | 3_1:-79167572 | None:intergenic |
GTTAGCGGTGAGATCGCCGT+CGG | 0.689961 | 3_1:-79167614 | None:intergenic |
AGTGCAAGGGATCTATACTG+AGG | 0.691054 | 3_1:+79171264 | Msa0378410:CDS |
CTTAATATGAGGATCCACGA+TGG | 0.692754 | 3_1:-79168724 | None:intergenic |
TCTGAAGGGCTATTGAAGCG+TGG | 0.698532 | 3_1:+79170078 | Msa0378410:CDS |
AAGCTCCTAACTGGTACCAG+CGG | 0.704334 | 3_1:-79170448 | None:intergenic |
ATTACACTAAGGATTCCAGT+GGG | 0.708397 | 3_1:+79168793 | Msa0378410:CDS |
GATTACAGCGGAGTAACCGT+CGG | 0.709407 | 3_1:-79167863 | None:intergenic |
TTTCTCACGGTAAAGCGAGG+GGG | 0.714940 | 3_1:+79168253 | Msa0378410:CDS |
TTTCTTCCAGGAGAAGACGG+TGG | 0.717944 | 3_1:-79167494 | None:intergenic |
TTACTACACATTATTCAGGG+AGG | 0.740218 | 3_1:+79171135 | Msa0378410:CDS |
CTTGCGTTGAAACCTACCAG+AGG | 0.748604 | 3_1:+79168126 | Msa0378410:CDS |
GGTCGCCGGAGTTATCGTCG+CGG | 0.751818 | 3_1:-79167912 | None:intergenic |
CGGATCGTGACGGATTACAG+CGG | 0.752571 | 3_1:-79167875 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAAATAATTTCATTTCTT+TGG | - | chr3_1:79167282-79167301 | None:intergenic | 10.0% |
!! | TGTTTCATATAATTTAAATT+TGG | + | chr3_1:79169866-79169885 | Msa0378410:intron | 10.0% |
!! | TTTAAATAATTTCATTTCTT+TGG | - | chr3_1:79167282-79167301 | None:intergenic | 10.0% |
!! | TGTTTCATATAATTTAAATT+TGG | + | chr3_1:79169866-79169885 | Msa0378410:intron | 10.0% |
!!! | AATGTAAGTCTTTATAATTT+TGG | - | chr3_1:79169201-79169220 | None:intergenic | 15.0% |
!!! | TACTTTTAAGCTTTTTTTTT+TGG | + | chr3_1:79170547-79170566 | Msa0378410:intron | 15.0% |
!!! | ATCATCAGTTTTTTTTTTTT+TGG | + | chr3_1:79170584-79170603 | Msa0378410:intron | 15.0% |
!! | TTGAATAAGTATAAAATGAA+GGG | - | chr3_1:79170614-79170633 | None:intergenic | 15.0% |
!!! | ACTTTTGACTAATTTTTAAA+GGG | - | chr3_1:79170697-79170716 | None:intergenic | 15.0% |
!!! | AATGTAAGTCTTTATAATTT+TGG | - | chr3_1:79169201-79169220 | None:intergenic | 15.0% |
!!! | TACTTTTAAGCTTTTTTTTT+TGG | + | chr3_1:79170547-79170566 | Msa0378410:intron | 15.0% |
!!! | ATCATCAGTTTTTTTTTTTT+TGG | + | chr3_1:79170584-79170603 | Msa0378410:intron | 15.0% |
!! | TTGAATAAGTATAAAATGAA+GGG | - | chr3_1:79170614-79170633 | None:intergenic | 15.0% |
!!! | ACTTTTGACTAATTTTTAAA+GGG | - | chr3_1:79170697-79170716 | None:intergenic | 15.0% |
!!! | TACCATTTCAAAAATCATTT+TGG | + | chr3_1:79167220-79167239 | Msa0378410:five_prime_UTR | 20.0% |
!!! | AACCAAAATGATTTTTGAAA+TGG | - | chr3_1:79167225-79167244 | None:intergenic | 20.0% |
!!! | AGTATTTCAATTTGTTAATG+TGG | + | chr3_1:79167308-79167327 | Msa0378410:five_prime_UTR | 20.0% |
!!! | GTATTTCAATTTGTTAATGT+GGG | + | chr3_1:79167309-79167328 | Msa0378410:five_prime_UTR | 20.0% |
!! | ACCTTATAGATTATTCAATT+TGG | + | chr3_1:79168170-79168189 | Msa0378410:CDS | 20.0% |
!! | TCCAAATTGAATAATCTATA+AGG | - | chr3_1:79168174-79168193 | None:intergenic | 20.0% |
!!! | ATTTTCTTATCAAAGTTATG+TGG | + | chr3_1:79168902-79168921 | Msa0378410:CDS | 20.0% |
!!! | TTTTCTTATCAAAGTTATGT+GGG | + | chr3_1:79168903-79168922 | Msa0378410:CDS | 20.0% |
!! | TTGAAATAATAAACATACCT+CGG | - | chr3_1:79168988-79169007 | None:intergenic | 20.0% |
!!! | TATATTCATGCATTTTGATT+TGG | + | chr3_1:79169059-79169078 | Msa0378410:intron | 20.0% |
!!! | ATATTCATGCATTTTGATTT+GGG | + | chr3_1:79169060-79169079 | Msa0378410:intron | 20.0% |
!!! | TAATGTGATAGTAATTTGTA+AGG | + | chr3_1:79169097-79169116 | Msa0378410:intron | 20.0% |
!! | TTACATTTCTTGTATATGAT+AGG | + | chr3_1:79169214-79169233 | Msa0378410:intron | 20.0% |
!! | TACATTTCTTGTATATGATA+GGG | + | chr3_1:79169215-79169234 | Msa0378410:intron | 20.0% |
!! | ACTGATCTATTAATCAATAT+TGG | - | chr3_1:79169706-79169725 | None:intergenic | 20.0% |
!! | AAAAAAAGATCATCATAAGA+AGG | - | chr3_1:79170276-79170295 | None:intergenic | 20.0% |
!! | GTTGAATAAGTATAAAATGA+AGG | - | chr3_1:79170615-79170634 | None:intergenic | 20.0% |
!!! | CACTTTTGACTAATTTTTAA+AGG | - | chr3_1:79170698-79170717 | None:intergenic | 20.0% |
!! | TATATATAAGATTTGTACAG+TGG | - | chr3_1:79170752-79170771 | None:intergenic | 20.0% |
!! | TGAATAATGTGTAGTAATAT+GGG | - | chr3_1:79171132-79171151 | None:intergenic | 20.0% |
!! | ATATTACTACACATTATTCA+GGG | + | chr3_1:79171132-79171151 | Msa0378410:CDS | 20.0% |
!!! | TACCATTTCAAAAATCATTT+TGG | + | chr3_1:79167220-79167239 | Msa0378410:five_prime_UTR | 20.0% |
!!! | AACCAAAATGATTTTTGAAA+TGG | - | chr3_1:79167225-79167244 | None:intergenic | 20.0% |
!!! | AGTATTTCAATTTGTTAATG+TGG | + | chr3_1:79167308-79167327 | Msa0378410:five_prime_UTR | 20.0% |
!!! | GTATTTCAATTTGTTAATGT+GGG | + | chr3_1:79167309-79167328 | Msa0378410:five_prime_UTR | 20.0% |
!! | ACCTTATAGATTATTCAATT+TGG | + | chr3_1:79168170-79168189 | Msa0378410:CDS | 20.0% |
!! | TCCAAATTGAATAATCTATA+AGG | - | chr3_1:79168174-79168193 | None:intergenic | 20.0% |
!!! | ATTTTCTTATCAAAGTTATG+TGG | + | chr3_1:79168902-79168921 | Msa0378410:CDS | 20.0% |
!!! | TTTTCTTATCAAAGTTATGT+GGG | + | chr3_1:79168903-79168922 | Msa0378410:CDS | 20.0% |
!! | TTGAAATAATAAACATACCT+CGG | - | chr3_1:79168988-79169007 | None:intergenic | 20.0% |
!!! | TATATTCATGCATTTTGATT+TGG | + | chr3_1:79169059-79169078 | Msa0378410:intron | 20.0% |
!!! | ATATTCATGCATTTTGATTT+GGG | + | chr3_1:79169060-79169079 | Msa0378410:intron | 20.0% |
!!! | TAATGTGATAGTAATTTGTA+AGG | + | chr3_1:79169097-79169116 | Msa0378410:intron | 20.0% |
!! | TTACATTTCTTGTATATGAT+AGG | + | chr3_1:79169214-79169233 | Msa0378410:intron | 20.0% |
!! | TACATTTCTTGTATATGATA+GGG | + | chr3_1:79169215-79169234 | Msa0378410:intron | 20.0% |
!! | ACTGATCTATTAATCAATAT+TGG | - | chr3_1:79169706-79169725 | None:intergenic | 20.0% |
!! | AAAAAAAGATCATCATAAGA+AGG | - | chr3_1:79170276-79170295 | None:intergenic | 20.0% |
!! | GTTGAATAAGTATAAAATGA+AGG | - | chr3_1:79170615-79170634 | None:intergenic | 20.0% |
!!! | CACTTTTGACTAATTTTTAA+AGG | - | chr3_1:79170698-79170717 | None:intergenic | 20.0% |
!! | TATATATAAGATTTGTACAG+TGG | - | chr3_1:79170752-79170771 | None:intergenic | 20.0% |
!! | TGAATAATGTGTAGTAATAT+GGG | - | chr3_1:79171132-79171151 | None:intergenic | 20.0% |
!! | ATATTACTACACATTATTCA+GGG | + | chr3_1:79171132-79171151 | Msa0378410:CDS | 20.0% |
! | AGAAAAACGAAGATGAAAAT+TGG | + | chr3_1:79167986-79168005 | Msa0378410:CDS | 25.0% |
! | GAAAAACGAAGATGAAAATT+GGG | + | chr3_1:79167987-79168006 | Msa0378410:CDS | 25.0% |
!!! | TATGATGCTGATTTTGTTTA+TGG | + | chr3_1:79168081-79168100 | Msa0378410:CDS | 25.0% |
!! | TTGATGCATTTTTCTTTGTT+GGG | + | chr3_1:79168415-79168434 | Msa0378410:CDS | 25.0% |
!! | ATATTCCTTATGATGTTTTG+TGG | + | chr3_1:79168589-79168608 | Msa0378410:CDS | 25.0% |
!! | TGAGAATTTTCATTTGCATA+AGG | + | chr3_1:79168752-79168771 | Msa0378410:CDS | 25.0% |
! | TGAAATAATAAACATACCTC+GGG | - | chr3_1:79168987-79169006 | None:intergenic | 25.0% |
! | ATGATTATCATGGAAATTGA+TGG | - | chr3_1:79169142-79169161 | None:intergenic | 25.0% |
! | TCATGTATTCATGATTATCA+TGG | - | chr3_1:79169152-79169171 | None:intergenic | 25.0% |
!! | GTAAGTCTTTATAATTTTGG+TGG | - | chr3_1:79169198-79169217 | None:intergenic | 25.0% |
! | ATAGCTAATCCTAAATTATG+AGG | - | chr3_1:79169287-79169306 | None:intergenic | 25.0% |
! | TCAAACAAGTATTCTATCTT+TGG | - | chr3_1:79169344-79169363 | None:intergenic | 25.0% |
! | AAAGCACATTAATGATGATT+GGG | - | chr3_1:79169405-79169424 | None:intergenic | 25.0% |
! | TAAAGCACATTAATGATGAT+TGG | - | chr3_1:79169406-79169425 | None:intergenic | 25.0% |
! | ATATAATCTTAGCATGTGTT+TGG | - | chr3_1:79169643-79169662 | None:intergenic | 25.0% |
! | AAACACATGCTAAGATTATA+TGG | + | chr3_1:79169642-79169661 | Msa0378410:intron | 25.0% |
! | TTGCTTCACTATAAAATTTC+GGG | - | chr3_1:79169795-79169814 | None:intergenic | 25.0% |
! | GTTGCTTCACTATAAAATTT+CGG | - | chr3_1:79169796-79169815 | None:intergenic | 25.0% |
!!! | ACTGATGATATATTGACTTT+GGG | - | chr3_1:79170573-79170592 | None:intergenic | 25.0% |
!!! | AACTGATGATATATTGACTT+TGG | - | chr3_1:79170574-79170593 | None:intergenic | 25.0% |
!! | GTCAAAAGTGATTTTATAGA+AGG | + | chr3_1:79170708-79170727 | Msa0378410:intron | 25.0% |
! | AGCGAAAAACAGAATTAATT+AGG | + | chr3_1:79171077-79171096 | Msa0378410:CDS | 25.0% |
! | GCGAAAAACAGAATTAATTA+GGG | + | chr3_1:79171078-79171097 | Msa0378410:CDS | 25.0% |
! | CTGAATAATGTGTAGTAATA+TGG | - | chr3_1:79171133-79171152 | None:intergenic | 25.0% |
! | CATATTACTACACATTATTC+AGG | + | chr3_1:79171131-79171150 | Msa0378410:CDS | 25.0% |
! | TAAAAGTAGTTTCATCAGAT+GGG | - | chr3_1:79171207-79171226 | None:intergenic | 25.0% |
! | AGAAAAACGAAGATGAAAAT+TGG | + | chr3_1:79167986-79168005 | Msa0378410:CDS | 25.0% |
! | GAAAAACGAAGATGAAAATT+GGG | + | chr3_1:79167987-79168006 | Msa0378410:CDS | 25.0% |
!!! | TATGATGCTGATTTTGTTTA+TGG | + | chr3_1:79168081-79168100 | Msa0378410:CDS | 25.0% |
!! | TTGATGCATTTTTCTTTGTT+GGG | + | chr3_1:79168415-79168434 | Msa0378410:CDS | 25.0% |
!! | ATATTCCTTATGATGTTTTG+TGG | + | chr3_1:79168589-79168608 | Msa0378410:CDS | 25.0% |
!! | TGAGAATTTTCATTTGCATA+AGG | + | chr3_1:79168752-79168771 | Msa0378410:CDS | 25.0% |
! | TGAAATAATAAACATACCTC+GGG | - | chr3_1:79168987-79169006 | None:intergenic | 25.0% |
! | ATGATTATCATGGAAATTGA+TGG | - | chr3_1:79169142-79169161 | None:intergenic | 25.0% |
! | TCATGTATTCATGATTATCA+TGG | - | chr3_1:79169152-79169171 | None:intergenic | 25.0% |
!! | GTAAGTCTTTATAATTTTGG+TGG | - | chr3_1:79169198-79169217 | None:intergenic | 25.0% |
! | ATAGCTAATCCTAAATTATG+AGG | - | chr3_1:79169287-79169306 | None:intergenic | 25.0% |
! | TCAAACAAGTATTCTATCTT+TGG | - | chr3_1:79169344-79169363 | None:intergenic | 25.0% |
! | AAAGCACATTAATGATGATT+GGG | - | chr3_1:79169405-79169424 | None:intergenic | 25.0% |
! | TAAAGCACATTAATGATGAT+TGG | - | chr3_1:79169406-79169425 | None:intergenic | 25.0% |
! | ATATAATCTTAGCATGTGTT+TGG | - | chr3_1:79169643-79169662 | None:intergenic | 25.0% |
! | AAACACATGCTAAGATTATA+TGG | + | chr3_1:79169642-79169661 | Msa0378410:intron | 25.0% |
! | TTGCTTCACTATAAAATTTC+GGG | - | chr3_1:79169795-79169814 | None:intergenic | 25.0% |
! | GTTGCTTCACTATAAAATTT+CGG | - | chr3_1:79169796-79169815 | None:intergenic | 25.0% |
!!! | ACTGATGATATATTGACTTT+GGG | - | chr3_1:79170573-79170592 | None:intergenic | 25.0% |
!!! | AACTGATGATATATTGACTT+TGG | - | chr3_1:79170574-79170593 | None:intergenic | 25.0% |
!! | GTCAAAAGTGATTTTATAGA+AGG | + | chr3_1:79170708-79170727 | Msa0378410:intron | 25.0% |
! | AGCGAAAAACAGAATTAATT+AGG | + | chr3_1:79171077-79171096 | Msa0378410:CDS | 25.0% |
! | GCGAAAAACAGAATTAATTA+GGG | + | chr3_1:79171078-79171097 | Msa0378410:CDS | 25.0% |
! | CTGAATAATGTGTAGTAATA+TGG | - | chr3_1:79171133-79171152 | None:intergenic | 25.0% |
! | CATATTACTACACATTATTC+AGG | + | chr3_1:79171131-79171150 | Msa0378410:CDS | 25.0% |
! | TAAAAGTAGTTTCATCAGAT+GGG | - | chr3_1:79171207-79171226 | None:intergenic | 25.0% |
! | GAAATGAAGGTGTAAAGATT+CGG | - | chr3_1:79167398-79167417 | None:intergenic | 30.0% |
AATGTCATAGCAAATGAATC+TGG | - | chr3_1:79167420-79167439 | None:intergenic | 30.0% | |
GTAATTTCCATTAACTCACA+CGG | + | chr3_1:79167937-79167956 | Msa0378410:CDS | 30.0% | |
! | GTTGATGCATTTTTCTTTGT+TGG | + | chr3_1:79168414-79168433 | Msa0378410:CDS | 30.0% |
TACTGTCTCAAAACATCTTT+CGG | - | chr3_1:79168447-79168466 | None:intergenic | 30.0% | |
CTTGATATTGAACATACTGA+CGG | + | chr3_1:79168612-79168631 | Msa0378410:CDS | 30.0% | |
TTGATATTGAACATACTGAC+GGG | + | chr3_1:79168613-79168632 | Msa0378410:CDS | 30.0% | |
TTCTCATCTCTCTTAATATG+AGG | - | chr3_1:79168738-79168757 | None:intergenic | 30.0% | |
! | GAATTTTCATTTGCATAAGG+AGG | + | chr3_1:79168755-79168774 | Msa0378410:CDS | 30.0% |
ATACTTTGAACCCTGAAATT+AGG | + | chr3_1:79168862-79168881 | Msa0378410:CDS | 30.0% | |
TCATTCCATATGTAAAGTGA+AGG | - | chr3_1:79168936-79168955 | None:intergenic | 30.0% | |
AATGAACCTTCTGTCTTTAA+TGG | + | chr3_1:79168960-79168979 | Msa0378410:CDS | 30.0% | |
ATGAATACATGAGTATGACA+TGG | + | chr3_1:79169160-79169179 | Msa0378410:intron | 30.0% | |
TTGTTAGTGCCTCATAATTT+AGG | + | chr3_1:79169275-79169294 | Msa0378410:intron | 30.0% | |
ACTTGTTTGAAAATCAGTAG+TGG | + | chr3_1:79169354-79169373 | Msa0378410:intron | 30.0% | |
! | ACTAGTAAGTATGATGATGT+TGG | - | chr3_1:79169380-79169399 | None:intergenic | 30.0% |
TCATCATTAATGTGCTTTAG+CGG | + | chr3_1:79169407-79169426 | Msa0378410:intron | 30.0% | |
AACAAATCTTCAGTCAGTTA+GGG | - | chr3_1:79169503-79169522 | None:intergenic | 30.0% | |
AAACAAATCTTCAGTCAGTT+AGG | - | chr3_1:79169504-79169523 | None:intergenic | 30.0% | |
! | TAACTGACTGAAGATTTGTT+TGG | + | chr3_1:79169503-79169522 | Msa0378410:intron | 30.0% |
GAAGCAAGAAATTGTAAAGT+TGG | + | chr3_1:79169582-79169601 | Msa0378410:intron | 30.0% | |
!!! | TTTGGAAGGTAACTTTTTCA+CGG | - | chr3_1:79169625-79169644 | None:intergenic | 30.0% |
!! | AATATTGGTTTAGCTTCACT+GGG | - | chr3_1:79169691-79169710 | None:intergenic | 30.0% |
! | ATAAAATTTCGGGTCATTGT+GGG | - | chr3_1:79169785-79169804 | None:intergenic | 30.0% |
! | TATAAAATTTCGGGTCATTG+TGG | - | chr3_1:79169786-79169805 | None:intergenic | 30.0% |
TTTATAGTGAAGCAACTTGT+TGG | + | chr3_1:79169800-79169819 | Msa0378410:intron | 30.0% | |
! | TACTTTTAATGACTGTGCAT+TGG | + | chr3_1:79169921-79169940 | Msa0378410:intron | 30.0% |
TGATTGTTTACATTGTATCC+AGG | + | chr3_1:79169966-79169985 | Msa0378410:intron | 30.0% | |
AATGCTCTTGACAAAACAAA+TGG | - | chr3_1:79170120-79170139 | None:intergenic | 30.0% | |
ATTCTTCTCATATTCAGAGT+CGG | + | chr3_1:79170298-79170317 | Msa0378410:intron | 30.0% | |
AGCTTACTATCCTTTCTTTA+GGG | + | chr3_1:79170466-79170485 | Msa0378410:CDS | 30.0% | |
CTTAATGGCAAGGAAAATAA+TGG | - | chr3_1:79170665-79170684 | None:intergenic | 30.0% | |
TTTATAGAAGGACTTTACCA+AGG | + | chr3_1:79170720-79170739 | Msa0378410:intron | 30.0% | |
TTATAGAAGGACTTTACCAA+GGG | + | chr3_1:79170721-79170740 | Msa0378410:intron | 30.0% | |
ACAATTCAGGATCCATTTAA+CGG | - | chr3_1:79170997-79171016 | None:intergenic | 30.0% | |
CTAAAAGTAGTTTCATCAGA+TGG | - | chr3_1:79171208-79171227 | None:intergenic | 30.0% | |
! | GAAATGAAGGTGTAAAGATT+CGG | - | chr3_1:79167398-79167417 | None:intergenic | 30.0% |
AATGTCATAGCAAATGAATC+TGG | - | chr3_1:79167420-79167439 | None:intergenic | 30.0% | |
GTAATTTCCATTAACTCACA+CGG | + | chr3_1:79167937-79167956 | Msa0378410:CDS | 30.0% | |
! | GTTGATGCATTTTTCTTTGT+TGG | + | chr3_1:79168414-79168433 | Msa0378410:CDS | 30.0% |
TACTGTCTCAAAACATCTTT+CGG | - | chr3_1:79168447-79168466 | None:intergenic | 30.0% | |
CTTGATATTGAACATACTGA+CGG | + | chr3_1:79168612-79168631 | Msa0378410:CDS | 30.0% | |
TTGATATTGAACATACTGAC+GGG | + | chr3_1:79168613-79168632 | Msa0378410:CDS | 30.0% | |
TTCTCATCTCTCTTAATATG+AGG | - | chr3_1:79168738-79168757 | None:intergenic | 30.0% | |
! | GAATTTTCATTTGCATAAGG+AGG | + | chr3_1:79168755-79168774 | Msa0378410:CDS | 30.0% |
ATACTTTGAACCCTGAAATT+AGG | + | chr3_1:79168862-79168881 | Msa0378410:CDS | 30.0% | |
TCATTCCATATGTAAAGTGA+AGG | - | chr3_1:79168936-79168955 | None:intergenic | 30.0% | |
AATGAACCTTCTGTCTTTAA+TGG | + | chr3_1:79168960-79168979 | Msa0378410:CDS | 30.0% | |
ATGAATACATGAGTATGACA+TGG | + | chr3_1:79169160-79169179 | Msa0378410:intron | 30.0% | |
TTGTTAGTGCCTCATAATTT+AGG | + | chr3_1:79169275-79169294 | Msa0378410:intron | 30.0% | |
ACTTGTTTGAAAATCAGTAG+TGG | + | chr3_1:79169354-79169373 | Msa0378410:intron | 30.0% | |
! | ACTAGTAAGTATGATGATGT+TGG | - | chr3_1:79169380-79169399 | None:intergenic | 30.0% |
TCATCATTAATGTGCTTTAG+CGG | + | chr3_1:79169407-79169426 | Msa0378410:intron | 30.0% | |
AACAAATCTTCAGTCAGTTA+GGG | - | chr3_1:79169503-79169522 | None:intergenic | 30.0% | |
AAACAAATCTTCAGTCAGTT+AGG | - | chr3_1:79169504-79169523 | None:intergenic | 30.0% | |
! | TAACTGACTGAAGATTTGTT+TGG | + | chr3_1:79169503-79169522 | Msa0378410:intron | 30.0% |
GAAGCAAGAAATTGTAAAGT+TGG | + | chr3_1:79169582-79169601 | Msa0378410:intron | 30.0% | |
!!! | TTTGGAAGGTAACTTTTTCA+CGG | - | chr3_1:79169625-79169644 | None:intergenic | 30.0% |
!! | AATATTGGTTTAGCTTCACT+GGG | - | chr3_1:79169691-79169710 | None:intergenic | 30.0% |
! | ATAAAATTTCGGGTCATTGT+GGG | - | chr3_1:79169785-79169804 | None:intergenic | 30.0% |
! | TATAAAATTTCGGGTCATTG+TGG | - | chr3_1:79169786-79169805 | None:intergenic | 30.0% |
TTTATAGTGAAGCAACTTGT+TGG | + | chr3_1:79169800-79169819 | Msa0378410:intron | 30.0% | |
! | TACTTTTAATGACTGTGCAT+TGG | + | chr3_1:79169921-79169940 | Msa0378410:intron | 30.0% |
TGATTGTTTACATTGTATCC+AGG | + | chr3_1:79169966-79169985 | Msa0378410:intron | 30.0% | |
AATGCTCTTGACAAAACAAA+TGG | - | chr3_1:79170120-79170139 | None:intergenic | 30.0% | |
ATTCTTCTCATATTCAGAGT+CGG | + | chr3_1:79170298-79170317 | Msa0378410:intron | 30.0% | |
AGCTTACTATCCTTTCTTTA+GGG | + | chr3_1:79170466-79170485 | Msa0378410:CDS | 30.0% | |
CTTAATGGCAAGGAAAATAA+TGG | - | chr3_1:79170665-79170684 | None:intergenic | 30.0% | |
TTTATAGAAGGACTTTACCA+AGG | + | chr3_1:79170720-79170739 | Msa0378410:intron | 30.0% | |
TTATAGAAGGACTTTACCAA+GGG | + | chr3_1:79170721-79170740 | Msa0378410:intron | 30.0% | |
ACAATTCAGGATCCATTTAA+CGG | - | chr3_1:79170997-79171016 | None:intergenic | 30.0% | |
CTAAAAGTAGTTTCATCAGA+TGG | - | chr3_1:79171208-79171227 | None:intergenic | 30.0% | |
!!! | GTTTGCATTTGAGTTTTGAG+TGG | + | chr3_1:79167242-79167261 | Msa0378410:five_prime_UTR | 35.0% |
GCAAATGAATCTGGAAATGA+AGG | - | chr3_1:79167411-79167430 | None:intergenic | 35.0% | |
!! | AGTAAGGGTTTTGATGAATC+GGG | - | chr3_1:79167658-79167677 | None:intergenic | 35.0% |
!! | GAGTAAGGGTTTTGATGAAT+CGG | - | chr3_1:79167659-79167678 | None:intergenic | 35.0% |
GTGAGTTAATGGAAATTACC+CGG | - | chr3_1:79167936-79167955 | None:intergenic | 35.0% | |
GAATAAACCGTGTGAGTTAA+TGG | - | chr3_1:79167947-79167966 | None:intergenic | 35.0% | |
! | GTCTTTTGTCAGTATGTGTT+CGG | - | chr3_1:79168023-79168042 | None:intergenic | 35.0% |
CATACTGACAAAAGACCATA+CGG | + | chr3_1:79168027-79168046 | Msa0378410:CDS | 35.0% | |
GGTTCAGATTCTTCAACATT+AGG | - | chr3_1:79168153-79168172 | None:intergenic | 35.0% | |
ATCGAACCATAAAGTCCAAA+CGG | - | chr3_1:79168222-79168241 | None:intergenic | 35.0% | |
ATTCCATTCATGCTTTCTCA+CGG | + | chr3_1:79168240-79168259 | Msa0378410:CDS | 35.0% | |
TCAATCCTATTCTGTGAAGT+AGG | - | chr3_1:79168366-79168385 | None:intergenic | 35.0% | |
AGAATAGGATTGATACGATG+TGG | + | chr3_1:79168373-79168392 | Msa0378410:CDS | 35.0% | |
TCAAGCCACAAAACATCATA+AGG | - | chr3_1:79168597-79168616 | None:intergenic | 35.0% | |
CAGAAGAAATTGGATGGTAA+GGG | + | chr3_1:79168687-79168706 | Msa0378410:CDS | 35.0% | |
!! | AGAGAAAGGGTATTACACTA+AGG | + | chr3_1:79168782-79168801 | Msa0378410:CDS | 35.0% |
TATTACACTAAGGATTCCAG+TGG | + | chr3_1:79168792-79168811 | Msa0378410:CDS | 35.0% | |
ATTACACTAAGGATTCCAGT+GGG | + | chr3_1:79168793-79168812 | Msa0378410:CDS | 35.0% | |
! | ATTTCAGGGTTCAAAGTATC+CGG | - | chr3_1:79168861-79168880 | None:intergenic | 35.0% |
CAACTCCTTCACTTTACATA+TGG | + | chr3_1:79168928-79168947 | Msa0378410:CDS | 35.0% | |
!! | GTCGTTGTTGTTTCAATTCA+AGG | + | chr3_1:79169028-79169047 | Msa0378410:intron | 35.0% |
ACAAGTATTCTATCTTTGGC+TGG | - | chr3_1:79169340-79169359 | None:intergenic | 35.0% | |
CTAATCTCACTCAAAAGAGA+AGG | + | chr3_1:79169464-79169483 | Msa0378410:intron | 35.0% | |
TTGCTTCTATATGTTCACAG+TGG | - | chr3_1:79169569-79169588 | None:intergenic | 35.0% | |
AATCTTAGCATGTGTTTGGA+AGG | - | chr3_1:79169639-79169658 | None:intergenic | 35.0% | |
CACATGCTAAGATTATATGG+TGG | + | chr3_1:79169645-79169664 | Msa0378410:intron | 35.0% | |
!! | ATGGTGGAGATTCTGAAATT+TGG | + | chr3_1:79169661-79169680 | Msa0378410:intron | 35.0% |
!! | ATATTGGTTTAGCTTCACTG+GGG | - | chr3_1:79169690-79169709 | None:intergenic | 35.0% |
!! | CAATATTGGTTTAGCTTCAC+TGG | - | chr3_1:79169692-79169711 | None:intergenic | 35.0% |
GAGCTTACTATCCTTTCTTT+AGG | + | chr3_1:79170465-79170484 | Msa0378410:CDS | 35.0% | |
AAAGGGAAAACAGCTCTTAA+TGG | - | chr3_1:79170680-79170699 | None:intergenic | 35.0% | |
AAGTGCAAACTAGTATCACA+AGG | + | chr3_1:79170819-79170838 | Msa0378410:intron | 35.0% | |
GGAAATACAGTAGGTAAGTA+TGG | - | chr3_1:79170969-79170988 | None:intergenic | 35.0% | |
TATTTCCCTTGACCGTTAAA+TGG | + | chr3_1:79170982-79171001 | Msa0378410:intron | 35.0% | |
TAAATGGATCCTGAATTGTG+TGG | + | chr3_1:79170998-79171017 | Msa0378410:intron | 35.0% | |
AAATGGATCCTGAATTGTGT+GGG | + | chr3_1:79170999-79171018 | Msa0378410:intron | 35.0% | |
TTACTACACATTATTCAGGG+AGG | + | chr3_1:79171135-79171154 | Msa0378410:CDS | 35.0% | |
TAGCAATGATGAAGCTTTCA+TGG | + | chr3_1:79171225-79171244 | Msa0378410:CDS | 35.0% | |
AATGATGAAGCTTTCATGGT+CGG | + | chr3_1:79171229-79171248 | Msa0378410:CDS | 35.0% | |
!!! | GTTTGCATTTGAGTTTTGAG+TGG | + | chr3_1:79167242-79167261 | Msa0378410:five_prime_UTR | 35.0% |
GCAAATGAATCTGGAAATGA+AGG | - | chr3_1:79167411-79167430 | None:intergenic | 35.0% | |
!! | AGTAAGGGTTTTGATGAATC+GGG | - | chr3_1:79167658-79167677 | None:intergenic | 35.0% |
!! | GAGTAAGGGTTTTGATGAAT+CGG | - | chr3_1:79167659-79167678 | None:intergenic | 35.0% |
GTGAGTTAATGGAAATTACC+CGG | - | chr3_1:79167936-79167955 | None:intergenic | 35.0% | |
GAATAAACCGTGTGAGTTAA+TGG | - | chr3_1:79167947-79167966 | None:intergenic | 35.0% | |
! | GTCTTTTGTCAGTATGTGTT+CGG | - | chr3_1:79168023-79168042 | None:intergenic | 35.0% |
CATACTGACAAAAGACCATA+CGG | + | chr3_1:79168027-79168046 | Msa0378410:CDS | 35.0% | |
GGTTCAGATTCTTCAACATT+AGG | - | chr3_1:79168153-79168172 | None:intergenic | 35.0% | |
ATCGAACCATAAAGTCCAAA+CGG | - | chr3_1:79168222-79168241 | None:intergenic | 35.0% | |
ATTCCATTCATGCTTTCTCA+CGG | + | chr3_1:79168240-79168259 | Msa0378410:CDS | 35.0% | |
TCAATCCTATTCTGTGAAGT+AGG | - | chr3_1:79168366-79168385 | None:intergenic | 35.0% | |
AGAATAGGATTGATACGATG+TGG | + | chr3_1:79168373-79168392 | Msa0378410:CDS | 35.0% | |
TCAAGCCACAAAACATCATA+AGG | - | chr3_1:79168597-79168616 | None:intergenic | 35.0% | |
CAGAAGAAATTGGATGGTAA+GGG | + | chr3_1:79168687-79168706 | Msa0378410:CDS | 35.0% | |
!! | AGAGAAAGGGTATTACACTA+AGG | + | chr3_1:79168782-79168801 | Msa0378410:CDS | 35.0% |
TATTACACTAAGGATTCCAG+TGG | + | chr3_1:79168792-79168811 | Msa0378410:CDS | 35.0% | |
ATTACACTAAGGATTCCAGT+GGG | + | chr3_1:79168793-79168812 | Msa0378410:CDS | 35.0% | |
! | ATTTCAGGGTTCAAAGTATC+CGG | - | chr3_1:79168861-79168880 | None:intergenic | 35.0% |
CAACTCCTTCACTTTACATA+TGG | + | chr3_1:79168928-79168947 | Msa0378410:CDS | 35.0% | |
!! | GTCGTTGTTGTTTCAATTCA+AGG | + | chr3_1:79169028-79169047 | Msa0378410:intron | 35.0% |
ACAAGTATTCTATCTTTGGC+TGG | - | chr3_1:79169340-79169359 | None:intergenic | 35.0% | |
CTAATCTCACTCAAAAGAGA+AGG | + | chr3_1:79169464-79169483 | Msa0378410:intron | 35.0% | |
TTGCTTCTATATGTTCACAG+TGG | - | chr3_1:79169569-79169588 | None:intergenic | 35.0% | |
AATCTTAGCATGTGTTTGGA+AGG | - | chr3_1:79169639-79169658 | None:intergenic | 35.0% | |
CACATGCTAAGATTATATGG+TGG | + | chr3_1:79169645-79169664 | Msa0378410:intron | 35.0% | |
!! | ATGGTGGAGATTCTGAAATT+TGG | + | chr3_1:79169661-79169680 | Msa0378410:intron | 35.0% |
!! | ATATTGGTTTAGCTTCACTG+GGG | - | chr3_1:79169690-79169709 | None:intergenic | 35.0% |
!! | CAATATTGGTTTAGCTTCAC+TGG | - | chr3_1:79169692-79169711 | None:intergenic | 35.0% |
GAGCTTACTATCCTTTCTTT+AGG | + | chr3_1:79170465-79170484 | Msa0378410:CDS | 35.0% | |
AAAGGGAAAACAGCTCTTAA+TGG | - | chr3_1:79170680-79170699 | None:intergenic | 35.0% | |
AAGTGCAAACTAGTATCACA+AGG | + | chr3_1:79170819-79170838 | Msa0378410:intron | 35.0% | |
GGAAATACAGTAGGTAAGTA+TGG | - | chr3_1:79170969-79170988 | None:intergenic | 35.0% | |
TATTTCCCTTGACCGTTAAA+TGG | + | chr3_1:79170982-79171001 | Msa0378410:intron | 35.0% | |
TAAATGGATCCTGAATTGTG+TGG | + | chr3_1:79170998-79171017 | Msa0378410:intron | 35.0% | |
AAATGGATCCTGAATTGTGT+GGG | + | chr3_1:79170999-79171018 | Msa0378410:intron | 35.0% | |
TTACTACACATTATTCAGGG+AGG | + | chr3_1:79171135-79171154 | Msa0378410:CDS | 35.0% | |
TAGCAATGATGAAGCTTTCA+TGG | + | chr3_1:79171225-79171244 | Msa0378410:CDS | 35.0% | |
AATGATGAAGCTTTCATGGT+CGG | + | chr3_1:79171229-79171248 | Msa0378410:CDS | 35.0% | |
TTCGGACAGTTGAAGAAACT+GGG | - | chr3_1:79167380-79167399 | None:intergenic | 40.0% | |
ATTCGGACAGTTGAAGAAAC+TGG | - | chr3_1:79167381-79167400 | None:intergenic | 40.0% | |
ATCTTTCTTCCAGGAGAAGA+CGG | - | chr3_1:79167500-79167519 | None:intergenic | 40.0% | |
ACGGAATTCATCTTTCTTCC+AGG | - | chr3_1:79167509-79167528 | None:intergenic | 40.0% | |
! | ATGGGGTTTGGTTACAGTTA+CGG | - | chr3_1:79167528-79167547 | None:intergenic | 40.0% |
AGATCTTCTGAATTGATGCG+TGG | - | chr3_1:79167814-79167833 | None:intergenic | 40.0% | |
GAGAGGTAAACAGAAGAAGA+AGG | - | chr3_1:79167844-79167863 | None:intergenic | 40.0% | |
ACATCGAAGCTAATCGATTG+AGG | - | chr3_1:79168054-79168073 | None:intergenic | 40.0% | |
TTCTTCAACATTAGGTCCTC+TGG | - | chr3_1:79168145-79168164 | None:intergenic | 40.0% | |
TATATTCACGATTCGCCGTT+TGG | + | chr3_1:79168204-79168223 | Msa0378410:CDS | 40.0% | |
! | TTACCGTGAGAAAGCATGAA+TGG | - | chr3_1:79168246-79168265 | None:intergenic | 40.0% |
GTTCAGCCAGAAAAAACCAT+TGG | - | chr3_1:79168280-79168299 | None:intergenic | 40.0% | |
CAAATTGATGTTCTTGCCTC+TGG | + | chr3_1:79168312-79168331 | Msa0378410:CDS | 40.0% | |
! | AGTTCTTTTCCCTAATCCTG+AGG | + | chr3_1:79168659-79168678 | Msa0378410:CDS | 40.0% |
AATTTCTTCTGCATCTCCTC+AGG | - | chr3_1:79168678-79168697 | None:intergenic | 40.0% | |
TGAGGAGATGCAGAAGAAAT+TGG | + | chr3_1:79168677-79168696 | Msa0378410:CDS | 40.0% | |
GAGATGCAGAAGAAATTGGA+TGG | + | chr3_1:79168681-79168700 | Msa0378410:CDS | 40.0% | |
GCAGAAGAAATTGGATGGTA+AGG | + | chr3_1:79168686-79168705 | Msa0378410:CDS | 40.0% | |
AGAAATTGGATGGTAAGGGA+AGG | + | chr3_1:79168691-79168710 | Msa0378410:CDS | 40.0% | |
CTTAATATGAGGATCCACGA+TGG | - | chr3_1:79168727-79168746 | None:intergenic | 40.0% | |
! | TCCAGTGGGAATGATTTTGA+TGG | + | chr3_1:79168807-79168826 | Msa0378410:CDS | 40.0% |
ACCATCAAAATCATTCCCAC+TGG | - | chr3_1:79168811-79168830 | None:intergenic | 40.0% | |
!! | GTGGGAATGATTTTGATGGT+TGG | + | chr3_1:79168811-79168830 | Msa0378410:CDS | 40.0% |
!! | ATGATTTTGATGGTTGGTGC+TGG | + | chr3_1:79168817-79168836 | Msa0378410:CDS | 40.0% |
TGAACCCTGAAATTAGGTCA+TGG | + | chr3_1:79168868-79168887 | Msa0378410:CDS | 40.0% | |
!!! | GTAACTTTTTCACGGTGTGA+AGG | - | chr3_1:79169617-79169636 | None:intergenic | 40.0% |
CGATACGTTGCTACAATTGT+CGG | + | chr3_1:79169737-79169756 | Msa0378410:intron | 40.0% | |
!! | TAGTGAAGCAACTTGTTGGT+TGG | + | chr3_1:79169804-79169823 | Msa0378410:intron | 40.0% |
GAAGTGAAGAGTCAGAATTG+CGG | - | chr3_1:79169840-79169859 | None:intergenic | 40.0% | |
! | CCATAATGTAAGGCATCTCT+AGG | - | chr3_1:79170000-79170019 | None:intergenic | 40.0% |
CCTAGAGATGCCTTACATTA+TGG | + | chr3_1:79169997-79170016 | Msa0378410:CDS | 40.0% | |
AGAGATGCCTTACATTATGG+AGG | + | chr3_1:79170000-79170019 | Msa0378410:CDS | 40.0% | |
TTCCACACCTCCATAATGTA+AGG | - | chr3_1:79170010-79170029 | None:intergenic | 40.0% | |
! | ATTATGGAGGTGTGGAACAT+CGG | + | chr3_1:79170013-79170032 | Msa0378410:CDS | 40.0% |
CATGTGGAAGTAATACCCAT+AGG | - | chr3_1:79170052-79170071 | None:intergenic | 40.0% | |
CTATGGGTATTACTTCCACA+TGG | + | chr3_1:79170050-79170069 | Msa0378410:CDS | 40.0% | |
!! | TTGTCAAGAGCATTGTTTGC+CGG | + | chr3_1:79170126-79170145 | Msa0378410:CDS | 40.0% |
! | GTCAAAGGTATGGTGCAATT+TGG | + | chr3_1:79170151-79170170 | Msa0378410:CDS | 40.0% |
!! | AACTCTAAGGTGATCCCAAT+CGG | - | chr3_1:79170193-79170212 | None:intergenic | 40.0% |
CCATAGGAACTGAAACTCTA+AGG | - | chr3_1:79170206-79170225 | None:intergenic | 40.0% | |
CCTTAGAGTTTCAGTTCCTA+TGG | + | chr3_1:79170203-79170222 | Msa0378410:CDS | 40.0% | |
ACGTTTCATGACCTTTATGC+AGG | + | chr3_1:79170377-79170396 | Msa0378410:intron | 40.0% | |
!!! | CTGATGTTGGTGGGTTTTTT+GGG | + | chr3_1:79170402-79170421 | Msa0378410:CDS | 40.0% |
AAGGATAGTAAGCTCCTAAC+TGG | - | chr3_1:79170460-79170479 | None:intergenic | 40.0% | |
! | TCGTCTTTTTGTGTCGTGAT+GGG | - | chr3_1:79170498-79170517 | None:intergenic | 40.0% |
ACACAAAAAGACGAGAACCA+TGG | + | chr3_1:79170504-79170523 | Msa0378410:CDS | 40.0% | |
GAAAACAGCTCTTAATGGCA+AGG | - | chr3_1:79170675-79170694 | None:intergenic | 40.0% | |
! | ACTCGTGAAGTTGTGGTTTT+TGG | - | chr3_1:79170854-79170873 | None:intergenic | 40.0% |
AGTGTAAACTCGTGAAGTTG+TGG | - | chr3_1:79170861-79170880 | None:intergenic | 40.0% | |
AGGATCCATTTAACGGTCAA+GGG | - | chr3_1:79170990-79171009 | None:intergenic | 40.0% | |
AACAGATTCCCACACAATTC+AGG | - | chr3_1:79171010-79171029 | None:intergenic | 40.0% | |
!! | GAATTCCATCCATAATGGAC+GGG | - | chr3_1:79171185-79171204 | None:intergenic | 40.0% |
! | GGAATTCCATCCATAATGGA+CGG | - | chr3_1:79171186-79171205 | None:intergenic | 40.0% |
GATGGGAATTCCATCCATAA+TGG | - | chr3_1:79171190-79171209 | None:intergenic | 40.0% | |
ATGATGAAGCTTTCATGGTC+GGG | + | chr3_1:79171230-79171249 | Msa0378410:CDS | 40.0% | |
!!! | GGAGCAGTATTTTAGTGCAA+GGG | + | chr3_1:79171251-79171270 | Msa0378410:CDS | 40.0% |
TTCGGACAGTTGAAGAAACT+GGG | - | chr3_1:79167380-79167399 | None:intergenic | 40.0% | |
ATTCGGACAGTTGAAGAAAC+TGG | - | chr3_1:79167381-79167400 | None:intergenic | 40.0% | |
ATCTTTCTTCCAGGAGAAGA+CGG | - | chr3_1:79167500-79167519 | None:intergenic | 40.0% | |
ACGGAATTCATCTTTCTTCC+AGG | - | chr3_1:79167509-79167528 | None:intergenic | 40.0% | |
! | ATGGGGTTTGGTTACAGTTA+CGG | - | chr3_1:79167528-79167547 | None:intergenic | 40.0% |
AGATCTTCTGAATTGATGCG+TGG | - | chr3_1:79167814-79167833 | None:intergenic | 40.0% | |
GAGAGGTAAACAGAAGAAGA+AGG | - | chr3_1:79167844-79167863 | None:intergenic | 40.0% | |
ACATCGAAGCTAATCGATTG+AGG | - | chr3_1:79168054-79168073 | None:intergenic | 40.0% | |
TTCTTCAACATTAGGTCCTC+TGG | - | chr3_1:79168145-79168164 | None:intergenic | 40.0% | |
TATATTCACGATTCGCCGTT+TGG | + | chr3_1:79168204-79168223 | Msa0378410:CDS | 40.0% | |
! | TTACCGTGAGAAAGCATGAA+TGG | - | chr3_1:79168246-79168265 | None:intergenic | 40.0% |
GTTCAGCCAGAAAAAACCAT+TGG | - | chr3_1:79168280-79168299 | None:intergenic | 40.0% | |
CAAATTGATGTTCTTGCCTC+TGG | + | chr3_1:79168312-79168331 | Msa0378410:CDS | 40.0% | |
! | AGTTCTTTTCCCTAATCCTG+AGG | + | chr3_1:79168659-79168678 | Msa0378410:CDS | 40.0% |
AATTTCTTCTGCATCTCCTC+AGG | - | chr3_1:79168678-79168697 | None:intergenic | 40.0% | |
TGAGGAGATGCAGAAGAAAT+TGG | + | chr3_1:79168677-79168696 | Msa0378410:CDS | 40.0% | |
GAGATGCAGAAGAAATTGGA+TGG | + | chr3_1:79168681-79168700 | Msa0378410:CDS | 40.0% | |
GCAGAAGAAATTGGATGGTA+AGG | + | chr3_1:79168686-79168705 | Msa0378410:CDS | 40.0% | |
AGAAATTGGATGGTAAGGGA+AGG | + | chr3_1:79168691-79168710 | Msa0378410:CDS | 40.0% | |
CTTAATATGAGGATCCACGA+TGG | - | chr3_1:79168727-79168746 | None:intergenic | 40.0% | |
! | TCCAGTGGGAATGATTTTGA+TGG | + | chr3_1:79168807-79168826 | Msa0378410:CDS | 40.0% |
ACCATCAAAATCATTCCCAC+TGG | - | chr3_1:79168811-79168830 | None:intergenic | 40.0% | |
!! | GTGGGAATGATTTTGATGGT+TGG | + | chr3_1:79168811-79168830 | Msa0378410:CDS | 40.0% |
!! | ATGATTTTGATGGTTGGTGC+TGG | + | chr3_1:79168817-79168836 | Msa0378410:CDS | 40.0% |
TGAACCCTGAAATTAGGTCA+TGG | + | chr3_1:79168868-79168887 | Msa0378410:CDS | 40.0% | |
!!! | GTAACTTTTTCACGGTGTGA+AGG | - | chr3_1:79169617-79169636 | None:intergenic | 40.0% |
CGATACGTTGCTACAATTGT+CGG | + | chr3_1:79169737-79169756 | Msa0378410:intron | 40.0% | |
!! | TAGTGAAGCAACTTGTTGGT+TGG | + | chr3_1:79169804-79169823 | Msa0378410:intron | 40.0% |
GAAGTGAAGAGTCAGAATTG+CGG | - | chr3_1:79169840-79169859 | None:intergenic | 40.0% | |
! | CCATAATGTAAGGCATCTCT+AGG | - | chr3_1:79170000-79170019 | None:intergenic | 40.0% |
CCTAGAGATGCCTTACATTA+TGG | + | chr3_1:79169997-79170016 | Msa0378410:CDS | 40.0% | |
AGAGATGCCTTACATTATGG+AGG | + | chr3_1:79170000-79170019 | Msa0378410:CDS | 40.0% | |
TTCCACACCTCCATAATGTA+AGG | - | chr3_1:79170010-79170029 | None:intergenic | 40.0% | |
! | ATTATGGAGGTGTGGAACAT+CGG | + | chr3_1:79170013-79170032 | Msa0378410:CDS | 40.0% |
CATGTGGAAGTAATACCCAT+AGG | - | chr3_1:79170052-79170071 | None:intergenic | 40.0% | |
CTATGGGTATTACTTCCACA+TGG | + | chr3_1:79170050-79170069 | Msa0378410:CDS | 40.0% | |
!! | TTGTCAAGAGCATTGTTTGC+CGG | + | chr3_1:79170126-79170145 | Msa0378410:CDS | 40.0% |
! | GTCAAAGGTATGGTGCAATT+TGG | + | chr3_1:79170151-79170170 | Msa0378410:CDS | 40.0% |
!! | AACTCTAAGGTGATCCCAAT+CGG | - | chr3_1:79170193-79170212 | None:intergenic | 40.0% |
CCATAGGAACTGAAACTCTA+AGG | - | chr3_1:79170206-79170225 | None:intergenic | 40.0% | |
CCTTAGAGTTTCAGTTCCTA+TGG | + | chr3_1:79170203-79170222 | Msa0378410:CDS | 40.0% | |
ACGTTTCATGACCTTTATGC+AGG | + | chr3_1:79170377-79170396 | Msa0378410:intron | 40.0% | |
!!! | CTGATGTTGGTGGGTTTTTT+GGG | + | chr3_1:79170402-79170421 | Msa0378410:CDS | 40.0% |
AAGGATAGTAAGCTCCTAAC+TGG | - | chr3_1:79170460-79170479 | None:intergenic | 40.0% | |
! | TCGTCTTTTTGTGTCGTGAT+GGG | - | chr3_1:79170498-79170517 | None:intergenic | 40.0% |
ACACAAAAAGACGAGAACCA+TGG | + | chr3_1:79170504-79170523 | Msa0378410:CDS | 40.0% | |
GAAAACAGCTCTTAATGGCA+AGG | - | chr3_1:79170675-79170694 | None:intergenic | 40.0% | |
! | ACTCGTGAAGTTGTGGTTTT+TGG | - | chr3_1:79170854-79170873 | None:intergenic | 40.0% |
AGTGTAAACTCGTGAAGTTG+TGG | - | chr3_1:79170861-79170880 | None:intergenic | 40.0% | |
AGGATCCATTTAACGGTCAA+GGG | - | chr3_1:79170990-79171009 | None:intergenic | 40.0% | |
AACAGATTCCCACACAATTC+AGG | - | chr3_1:79171010-79171029 | None:intergenic | 40.0% | |
!! | GAATTCCATCCATAATGGAC+GGG | - | chr3_1:79171185-79171204 | None:intergenic | 40.0% |
! | GGAATTCCATCCATAATGGA+CGG | - | chr3_1:79171186-79171205 | None:intergenic | 40.0% |
GATGGGAATTCCATCCATAA+TGG | - | chr3_1:79171190-79171209 | None:intergenic | 40.0% | |
ATGATGAAGCTTTCATGGTC+GGG | + | chr3_1:79171230-79171249 | Msa0378410:CDS | 40.0% | |
!!! | GGAGCAGTATTTTAGTGCAA+GGG | + | chr3_1:79171251-79171270 | Msa0378410:CDS | 40.0% |
GGATTTGGGGATTAGGTTAG+CGG | - | chr3_1:79167632-79167651 | None:intergenic | 45.0% | |
!! | ATGAATCGGGTTGGGATTTG+GGG | - | chr3_1:79167645-79167664 | None:intergenic | 45.0% |
!! | GATGAATCGGGTTGGGATTT+GGG | - | chr3_1:79167646-79167665 | None:intergenic | 45.0% |
!! | TGATGAATCGGGTTGGGATT+TGG | - | chr3_1:79167647-79167666 | None:intergenic | 45.0% |
!! | GGGTTTTGATGAATCGGGTT+GGG | - | chr3_1:79167653-79167672 | None:intergenic | 45.0% |
!! | AGGGTTTTGATGAATCGGGT+TGG | - | chr3_1:79167654-79167673 | None:intergenic | 45.0% |
ACTCTCTCCGTTCATCAAGA+CGG | + | chr3_1:79167682-79167701 | Msa0378410:CDS | 45.0% | |
GAGGATTCCGTCTTGATGAA+CGG | - | chr3_1:79167692-79167711 | None:intergenic | 45.0% | |
! | CGTTTTCGTCGATGATGAGA+CGG | - | chr3_1:79167714-79167733 | None:intergenic | 45.0% |
AATTCGCCAACACCAAACTC+TGG | + | chr3_1:79167785-79167804 | Msa0378410:CDS | 45.0% | |
TCTTCTGTTTACCTCTCCGA+CGG | + | chr3_1:79167847-79167866 | Msa0378410:CDS | 45.0% | |
AAAGCTCAAACGGATCGTGA+CGG | - | chr3_1:79167888-79167907 | None:intergenic | 45.0% | |
TCGCGGATGAAAAGCTCAAA+CGG | - | chr3_1:79167898-79167917 | None:intergenic | 45.0% | |
CTAATCGATTGAGGACCGTA+TGG | - | chr3_1:79168045-79168064 | None:intergenic | 45.0% | |
TCAACATTAGGTCCTCTGGT+AGG | - | chr3_1:79168141-79168160 | None:intergenic | 45.0% | |
GATTCGCCGTTTGGACTTTA+TGG | + | chr3_1:79168213-79168232 | Msa0378410:CDS | 45.0% | |
TTGATGTTCTTGCCTCTGGT+TGG | + | chr3_1:79168316-79168335 | Msa0378410:CDS | 45.0% | |
TGATGTTCTTGCCTCTGGTT+GGG | + | chr3_1:79168317-79168336 | Msa0378410:CDS | 45.0% | |
CGCTTCCTACTTCACAGAAT+AGG | + | chr3_1:79168358-79168377 | Msa0378410:CDS | 45.0% | |
! | CATTTTTCTTTGTTGGGCCG+CGG | + | chr3_1:79168421-79168440 | Msa0378410:CDS | 45.0% |
ATTGCCTCAGATGTTTGCAG+TGG | + | chr3_1:79168491-79168510 | Msa0378410:CDS | 45.0% | |
TAAGCCACTGCAAACATCTG+AGG | - | chr3_1:79168498-79168517 | None:intergenic | 45.0% | |
CAGTGGCTTATCATCAGTGT+CGG | + | chr3_1:79168508-79168527 | Msa0378410:CDS | 45.0% | |
TCGGTGGAATTATCGTGATG+AGG | + | chr3_1:79168527-79168546 | Msa0378410:CDS | 45.0% | |
GTGGAATTATCGTGATGAGG+AGG | + | chr3_1:79168530-79168549 | Msa0378410:CDS | 45.0% | |
TTGAACATACTGACGGGAAG+AGG | + | chr3_1:79168619-79168638 | Msa0378410:CDS | 45.0% | |
!!! | ACGGGAAGAGGTATTTTACC+TGG | + | chr3_1:79168631-79168650 | Msa0378410:CDS | 45.0% |
!!! | CGGGAAGAGGTATTTTACCT+GGG | + | chr3_1:79168632-79168651 | Msa0378410:CDS | 45.0% |
AGGGAAAAGAACTCTATCCC+AGG | - | chr3_1:79168652-79168671 | None:intergenic | 45.0% | |
TCTGCATCTCCTCAGGATTA+GGG | - | chr3_1:79168671-79168690 | None:intergenic | 45.0% | |
TTCTGCATCTCCTCAGGATT+AGG | - | chr3_1:79168672-79168691 | None:intergenic | 45.0% | |
!! | ATAAGGAGGCGTCAGAGAAA+GGG | + | chr3_1:79168769-79168788 | Msa0378410:CDS | 45.0% |
! | AGGGTTCAAAGTATCCGGAT+AGG | - | chr3_1:79168856-79168875 | None:intergenic | 45.0% |
ACCCTGAAATTAGGTCATGG+TGG | + | chr3_1:79168871-79168890 | Msa0378410:CDS | 45.0% | |
CCCACCATGACCTAATTTCA+GGG | - | chr3_1:79168875-79168894 | None:intergenic | 45.0% | |
CCCTGAAATTAGGTCATGGT+GGG | + | chr3_1:79168872-79168891 | Msa0378410:CDS | 45.0% | |
TCGGGACCATTAAAGACAGA+AGG | - | chr3_1:79168969-79168988 | None:intergenic | 45.0% | |
TTCTGTCTTTAATGGTCCCG+AGG | + | chr3_1:79168968-79168987 | Msa0378410:CDS | 45.0% | |
TGTGGGTGAATTCGGCATAA+TGG | - | chr3_1:79169768-79169787 | None:intergenic | 45.0% | |
GTCACTTGAGAAGAAGAGCT+TGG | + | chr3_1:79169888-79169907 | Msa0378410:intron | 45.0% | |
AGAAGAAGAGCTTGGATCTG+TGG | + | chr3_1:79169896-79169915 | Msa0378410:intron | 45.0% | |
GAAGAAGAGCTTGGATCTGT+GGG | + | chr3_1:79169897-79169916 | Msa0378410:intron | 45.0% | |
TGCCTTACATTATGGAGGTG+TGG | + | chr3_1:79170005-79170024 | Msa0378410:CDS | 45.0% | |
! | TTATGGAGGTGTGGAACATC+GGG | + | chr3_1:79170014-79170033 | Msa0378410:CDS | 45.0% |
GGGAGTTGCATAATGCCTAT+GGG | + | chr3_1:79170034-79170053 | Msa0378410:CDS | 45.0% | |
TTCCACATGGCAACATCTGA+AGG | + | chr3_1:79170063-79170082 | Msa0378410:CDS | 45.0% | |
TCCACATGGCAACATCTGAA+GGG | + | chr3_1:79170064-79170083 | Msa0378410:CDS | 45.0% | |
CATTGTTTGCCGGAAGTCAA+AGG | + | chr3_1:79170136-79170155 | Msa0378410:CDS | 45.0% | |
TTTGCCGGAAGTCAAAGGTA+TGG | + | chr3_1:79170141-79170160 | Msa0378410:CDS | 45.0% | |
! | TGCACCATACCTTTGACTTC+CGG | - | chr3_1:79170148-79170167 | None:intergenic | 45.0% |
AGGTATGGTGCAATTTGGAC+TGG | + | chr3_1:79170156-79170175 | Msa0378410:CDS | 45.0% | |
!!! | GTTCCTATGGTTTTGACCCT+TGG | + | chr3_1:79170216-79170235 | Msa0378410:CDS | 45.0% |
AGACCAAGGGTCAAAACCAT+AGG | - | chr3_1:79170222-79170241 | None:intergenic | 45.0% | |
!!! | GTTTTGACCCTTGGTCTTAC+CGG | + | chr3_1:79170225-79170244 | Msa0378410:CDS | 45.0% |
!!! | TTTTGACCCTTGGTCTTACC+GGG | + | chr3_1:79170226-79170245 | Msa0378410:CDS | 45.0% |
CAACATCAGCACCTGCATAA+AGG | - | chr3_1:79170391-79170410 | None:intergenic | 45.0% | |
!! | CTTTATGCAGGTGCTGATGT+TGG | + | chr3_1:79170389-79170408 | Msa0378410:intron | 45.0% |
!!! | GCTGATGTTGGTGGGTTTTT+TGG | + | chr3_1:79170401-79170420 | Msa0378410:CDS | 45.0% |
!!! | TGGTGGGTTTTTTGGGAATC+CGG | + | chr3_1:79170409-79170428 | Msa0378410:CDS | 45.0% |
GAATCCGGATCCTGAGTTAT+TGG | + | chr3_1:79170424-79170443 | Msa0378410:CDS | 45.0% | |
!!! | TTTTGTGTCGTGATGGGCAT+GGG | - | chr3_1:79170492-79170511 | None:intergenic | 45.0% |
!!! | TTTTTGTGTCGTGATGGGCA+TGG | - | chr3_1:79170493-79170512 | None:intergenic | 45.0% |
! | CTCGTCTTTTTGTGTCGTGA+TGG | - | chr3_1:79170499-79170518 | None:intergenic | 45.0% |
AGACGAGAACCATGGTTGTT+TGG | + | chr3_1:79170512-79170531 | Msa0378410:CDS | 45.0% | |
GACGAGAACCATGGTTGTTT+GGG | + | chr3_1:79170513-79170532 | Msa0378410:CDS | 45.0% | |
AGAACCATGGTTGTTTGGGT+AGG | + | chr3_1:79170517-79170536 | Msa0378410:intron | 45.0% | |
CAATCCTACCCAAACAACCA+TGG | - | chr3_1:79170524-79170543 | None:intergenic | 45.0% | |
TTGTACAGTGGTTCATCCCT+TGG | - | chr3_1:79170740-79170759 | None:intergenic | 45.0% | |
ACGGTCAAGGGAAATACAGT+AGG | - | chr3_1:79170978-79170997 | None:intergenic | 45.0% | |
CAGGATCCATTTAACGGTCA+AGG | - | chr3_1:79170991-79171010 | None:intergenic | 45.0% | |
!!! | GGGAGCAGTATTTTAGTGCA+AGG | + | chr3_1:79171250-79171269 | Msa0378410:CDS | 45.0% |
AGTGCAAGGGATCTATACTG+AGG | + | chr3_1:79171264-79171283 | Msa0378410:CDS | 45.0% | |
GGATTTGGGGATTAGGTTAG+CGG | - | chr3_1:79167632-79167651 | None:intergenic | 45.0% | |
!! | ATGAATCGGGTTGGGATTTG+GGG | - | chr3_1:79167645-79167664 | None:intergenic | 45.0% |
!! | GATGAATCGGGTTGGGATTT+GGG | - | chr3_1:79167646-79167665 | None:intergenic | 45.0% |
!! | TGATGAATCGGGTTGGGATT+TGG | - | chr3_1:79167647-79167666 | None:intergenic | 45.0% |
!! | GGGTTTTGATGAATCGGGTT+GGG | - | chr3_1:79167653-79167672 | None:intergenic | 45.0% |
!! | AGGGTTTTGATGAATCGGGT+TGG | - | chr3_1:79167654-79167673 | None:intergenic | 45.0% |
ACTCTCTCCGTTCATCAAGA+CGG | + | chr3_1:79167682-79167701 | Msa0378410:CDS | 45.0% | |
GAGGATTCCGTCTTGATGAA+CGG | - | chr3_1:79167692-79167711 | None:intergenic | 45.0% | |
! | CGTTTTCGTCGATGATGAGA+CGG | - | chr3_1:79167714-79167733 | None:intergenic | 45.0% |
AATTCGCCAACACCAAACTC+TGG | + | chr3_1:79167785-79167804 | Msa0378410:CDS | 45.0% | |
TCTTCTGTTTACCTCTCCGA+CGG | + | chr3_1:79167847-79167866 | Msa0378410:CDS | 45.0% | |
AAAGCTCAAACGGATCGTGA+CGG | - | chr3_1:79167888-79167907 | None:intergenic | 45.0% | |
TCGCGGATGAAAAGCTCAAA+CGG | - | chr3_1:79167898-79167917 | None:intergenic | 45.0% | |
CTAATCGATTGAGGACCGTA+TGG | - | chr3_1:79168045-79168064 | None:intergenic | 45.0% | |
TCAACATTAGGTCCTCTGGT+AGG | - | chr3_1:79168141-79168160 | None:intergenic | 45.0% | |
GATTCGCCGTTTGGACTTTA+TGG | + | chr3_1:79168213-79168232 | Msa0378410:CDS | 45.0% | |
TTGATGTTCTTGCCTCTGGT+TGG | + | chr3_1:79168316-79168335 | Msa0378410:CDS | 45.0% | |
TGATGTTCTTGCCTCTGGTT+GGG | + | chr3_1:79168317-79168336 | Msa0378410:CDS | 45.0% | |
CGCTTCCTACTTCACAGAAT+AGG | + | chr3_1:79168358-79168377 | Msa0378410:CDS | 45.0% | |
! | CATTTTTCTTTGTTGGGCCG+CGG | + | chr3_1:79168421-79168440 | Msa0378410:CDS | 45.0% |
ATTGCCTCAGATGTTTGCAG+TGG | + | chr3_1:79168491-79168510 | Msa0378410:CDS | 45.0% | |
TAAGCCACTGCAAACATCTG+AGG | - | chr3_1:79168498-79168517 | None:intergenic | 45.0% | |
CAGTGGCTTATCATCAGTGT+CGG | + | chr3_1:79168508-79168527 | Msa0378410:CDS | 45.0% | |
TCGGTGGAATTATCGTGATG+AGG | + | chr3_1:79168527-79168546 | Msa0378410:CDS | 45.0% | |
GTGGAATTATCGTGATGAGG+AGG | + | chr3_1:79168530-79168549 | Msa0378410:CDS | 45.0% | |
TTGAACATACTGACGGGAAG+AGG | + | chr3_1:79168619-79168638 | Msa0378410:CDS | 45.0% | |
!!! | ACGGGAAGAGGTATTTTACC+TGG | + | chr3_1:79168631-79168650 | Msa0378410:CDS | 45.0% |
!!! | CGGGAAGAGGTATTTTACCT+GGG | + | chr3_1:79168632-79168651 | Msa0378410:CDS | 45.0% |
AGGGAAAAGAACTCTATCCC+AGG | - | chr3_1:79168652-79168671 | None:intergenic | 45.0% | |
TCTGCATCTCCTCAGGATTA+GGG | - | chr3_1:79168671-79168690 | None:intergenic | 45.0% | |
TTCTGCATCTCCTCAGGATT+AGG | - | chr3_1:79168672-79168691 | None:intergenic | 45.0% | |
!! | ATAAGGAGGCGTCAGAGAAA+GGG | + | chr3_1:79168769-79168788 | Msa0378410:CDS | 45.0% |
! | AGGGTTCAAAGTATCCGGAT+AGG | - | chr3_1:79168856-79168875 | None:intergenic | 45.0% |
ACCCTGAAATTAGGTCATGG+TGG | + | chr3_1:79168871-79168890 | Msa0378410:CDS | 45.0% | |
CCCACCATGACCTAATTTCA+GGG | - | chr3_1:79168875-79168894 | None:intergenic | 45.0% | |
CCCTGAAATTAGGTCATGGT+GGG | + | chr3_1:79168872-79168891 | Msa0378410:CDS | 45.0% | |
TCGGGACCATTAAAGACAGA+AGG | - | chr3_1:79168969-79168988 | None:intergenic | 45.0% | |
TTCTGTCTTTAATGGTCCCG+AGG | + | chr3_1:79168968-79168987 | Msa0378410:CDS | 45.0% | |
TGTGGGTGAATTCGGCATAA+TGG | - | chr3_1:79169768-79169787 | None:intergenic | 45.0% | |
GTCACTTGAGAAGAAGAGCT+TGG | + | chr3_1:79169888-79169907 | Msa0378410:intron | 45.0% | |
AGAAGAAGAGCTTGGATCTG+TGG | + | chr3_1:79169896-79169915 | Msa0378410:intron | 45.0% | |
GAAGAAGAGCTTGGATCTGT+GGG | + | chr3_1:79169897-79169916 | Msa0378410:intron | 45.0% | |
TGCCTTACATTATGGAGGTG+TGG | + | chr3_1:79170005-79170024 | Msa0378410:CDS | 45.0% | |
! | TTATGGAGGTGTGGAACATC+GGG | + | chr3_1:79170014-79170033 | Msa0378410:CDS | 45.0% |
GGGAGTTGCATAATGCCTAT+GGG | + | chr3_1:79170034-79170053 | Msa0378410:CDS | 45.0% | |
TTCCACATGGCAACATCTGA+AGG | + | chr3_1:79170063-79170082 | Msa0378410:CDS | 45.0% | |
TCCACATGGCAACATCTGAA+GGG | + | chr3_1:79170064-79170083 | Msa0378410:CDS | 45.0% | |
CATTGTTTGCCGGAAGTCAA+AGG | + | chr3_1:79170136-79170155 | Msa0378410:CDS | 45.0% | |
TTTGCCGGAAGTCAAAGGTA+TGG | + | chr3_1:79170141-79170160 | Msa0378410:CDS | 45.0% | |
! | TGCACCATACCTTTGACTTC+CGG | - | chr3_1:79170148-79170167 | None:intergenic | 45.0% |
AGGTATGGTGCAATTTGGAC+TGG | + | chr3_1:79170156-79170175 | Msa0378410:CDS | 45.0% | |
!!! | GTTCCTATGGTTTTGACCCT+TGG | + | chr3_1:79170216-79170235 | Msa0378410:CDS | 45.0% |
AGACCAAGGGTCAAAACCAT+AGG | - | chr3_1:79170222-79170241 | None:intergenic | 45.0% | |
!!! | GTTTTGACCCTTGGTCTTAC+CGG | + | chr3_1:79170225-79170244 | Msa0378410:CDS | 45.0% |
!!! | TTTTGACCCTTGGTCTTACC+GGG | + | chr3_1:79170226-79170245 | Msa0378410:CDS | 45.0% |
CAACATCAGCACCTGCATAA+AGG | - | chr3_1:79170391-79170410 | None:intergenic | 45.0% | |
!! | CTTTATGCAGGTGCTGATGT+TGG | + | chr3_1:79170389-79170408 | Msa0378410:intron | 45.0% |
!!! | GCTGATGTTGGTGGGTTTTT+TGG | + | chr3_1:79170401-79170420 | Msa0378410:CDS | 45.0% |
!!! | TGGTGGGTTTTTTGGGAATC+CGG | + | chr3_1:79170409-79170428 | Msa0378410:CDS | 45.0% |
GAATCCGGATCCTGAGTTAT+TGG | + | chr3_1:79170424-79170443 | Msa0378410:CDS | 45.0% | |
!!! | TTTTGTGTCGTGATGGGCAT+GGG | - | chr3_1:79170492-79170511 | None:intergenic | 45.0% |
!!! | TTTTTGTGTCGTGATGGGCA+TGG | - | chr3_1:79170493-79170512 | None:intergenic | 45.0% |
! | CTCGTCTTTTTGTGTCGTGA+TGG | - | chr3_1:79170499-79170518 | None:intergenic | 45.0% |
AGACGAGAACCATGGTTGTT+TGG | + | chr3_1:79170512-79170531 | Msa0378410:CDS | 45.0% | |
GACGAGAACCATGGTTGTTT+GGG | + | chr3_1:79170513-79170532 | Msa0378410:CDS | 45.0% | |
AGAACCATGGTTGTTTGGGT+AGG | + | chr3_1:79170517-79170536 | Msa0378410:intron | 45.0% | |
CAATCCTACCCAAACAACCA+TGG | - | chr3_1:79170524-79170543 | None:intergenic | 45.0% | |
TTGTACAGTGGTTCATCCCT+TGG | - | chr3_1:79170740-79170759 | None:intergenic | 45.0% | |
ACGGTCAAGGGAAATACAGT+AGG | - | chr3_1:79170978-79170997 | None:intergenic | 45.0% | |
CAGGATCCATTTAACGGTCA+AGG | - | chr3_1:79170991-79171010 | None:intergenic | 45.0% | |
!!! | GGGAGCAGTATTTTAGTGCA+AGG | + | chr3_1:79171250-79171269 | Msa0378410:CDS | 45.0% |
AGTGCAAGGGATCTATACTG+AGG | + | chr3_1:79171264-79171283 | Msa0378410:CDS | 45.0% | |
TTTCTTCCAGGAGAAGACGG+TGG | - | chr3_1:79167497-79167516 | None:intergenic | 50.0% | |
ATCGAGCGCGTTTGCAGAAT+GGG | - | chr3_1:79167546-79167565 | None:intergenic | 50.0% | |
ACGGAGAGAGTGAGGAGTAA+GGG | - | chr3_1:79167673-79167692 | None:intergenic | 50.0% | |
AACGGAGAGAGTGAGGAGTA+AGG | - | chr3_1:79167674-79167693 | None:intergenic | 50.0% | |
CTTGATGAACGGAGAGAGTG+AGG | - | chr3_1:79167681-79167700 | None:intergenic | 50.0% | |
TTTCGTCGATGATGAGACGG+AGG | - | chr3_1:79167711-79167730 | None:intergenic | 50.0% | |
AATTGCGAAACGACGACGTC+GGG | - | chr3_1:79167769-79167788 | None:intergenic | 50.0% | |
GAATTGCGAAACGACGACGT+CGG | - | chr3_1:79167770-79167789 | None:intergenic | 50.0% | |
!! | TGGAAGCCAGAGTTTGGTGT+TGG | - | chr3_1:79167794-79167813 | None:intergenic | 50.0% |
GATTACAGCGGAGTAACCGT+CGG | - | chr3_1:79167866-79167885 | None:intergenic | 50.0% | |
TTCATCCGCGACGATAACTC+CGG | + | chr3_1:79167907-79167926 | Msa0378410:CDS | 50.0% | |
AATGGAAATTACCCGGTCGC+CGG | - | chr3_1:79167929-79167948 | None:intergenic | 50.0% | |
GCAAGACTCGTAGCATGTTC+GGG | - | chr3_1:79168111-79168130 | None:intergenic | 50.0% | |
CGCAAGACTCGTAGCATGTT+CGG | - | chr3_1:79168112-79168131 | None:intergenic | 50.0% | |
CTTGCGTTGAAACCTACCAG+AGG | + | chr3_1:79168126-79168145 | Msa0378410:CDS | 50.0% | |
TGCTTTCTCACGGTAAAGCG+AGG | + | chr3_1:79168250-79168269 | Msa0378410:CDS | 50.0% | |
GCTTTCTCACGGTAAAGCGA+GGG | + | chr3_1:79168251-79168270 | Msa0378410:CDS | 50.0% | |
CTTTCTCACGGTAAAGCGAG+GGG | + | chr3_1:79168252-79168271 | Msa0378410:CDS | 50.0% | |
TTTCTCACGGTAAAGCGAGG+GGG | + | chr3_1:79168253-79168272 | Msa0378410:CDS | 50.0% | |
!!! | GGGGGACCAATGGTTTTTTC+TGG | + | chr3_1:79168271-79168290 | Msa0378410:CDS | 50.0% |
ACGATGTGGATGAGTGAAGC+TGG | + | chr3_1:79168387-79168406 | Msa0378410:CDS | 50.0% | |
CTCAAAACATCTTTCGGCCG+CGG | - | chr3_1:79168441-79168460 | None:intergenic | 50.0% | |
GAGACAGTATGCTGCTGTGA+CGG | + | chr3_1:79168458-79168477 | Msa0378410:CDS | 50.0% | |
AGACAGTATGCTGCTGTGAC+GGG | + | chr3_1:79168459-79168478 | Msa0378410:CDS | 50.0% | |
! | TGGCTTATCATCAGTGTCGG+TGG | + | chr3_1:79168511-79168530 | Msa0378410:CDS | 50.0% |
!! | CATAAGGAGGCGTCAGAGAA+AGG | + | chr3_1:79168768-79168787 | Msa0378410:CDS | 50.0% |
GCCCACCATGACCTAATTTC+AGG | - | chr3_1:79168876-79168895 | None:intergenic | 50.0% | |
GTTCACAGTGGAAACGCACT+AGG | - | chr3_1:79169557-79169576 | None:intergenic | 50.0% | |
TCACGGTGTGAAGGTGAGTT+TGG | - | chr3_1:79169608-79169627 | None:intergenic | 50.0% | |
CGGGTCATTGTGGGTGAATT+CGG | - | chr3_1:79169776-79169795 | None:intergenic | 50.0% | |
AGAGTCAGAATTGCGGACAC+AGG | - | chr3_1:79169833-79169852 | None:intergenic | 50.0% | |
! | CATCTCTAGGCATTGTCACC+TGG | - | chr3_1:79169987-79170006 | None:intergenic | 50.0% |
CGGGAGTTGCATAATGCCTA+TGG | + | chr3_1:79170033-79170052 | Msa0378410:CDS | 50.0% | |
TCTGAAGGGCTATTGAAGCG+TGG | + | chr3_1:79170078-79170097 | Msa0378410:CDS | 50.0% | |
GGCTATTGAAGCGTGGTGAA+GGG | + | chr3_1:79170085-79170104 | Msa0378410:CDS | 50.0% | |
! | TGGCGATAACTCTGCCGATT+GGG | + | chr3_1:79170176-79170195 | Msa0378410:CDS | 50.0% |
TGACATCCCGGTAAGACCAA+GGG | - | chr3_1:79170235-79170254 | None:intergenic | 50.0% | |
ATGACATCCCGGTAAGACCA+AGG | - | chr3_1:79170236-79170255 | None:intergenic | 50.0% | |
CTTACCGGGATGTCATTCTC+TGG | + | chr3_1:79170240-79170259 | Msa0378410:CDS | 50.0% | |
CTGACCAGAGAATGACATCC+CGG | - | chr3_1:79170247-79170266 | None:intergenic | 50.0% | |
!! | TATGCAGGTGCTGATGTTGG+TGG | + | chr3_1:79170392-79170411 | Msa0378410:intron | 50.0% |
!! | ATGCAGGTGCTGATGTTGGT+GGG | + | chr3_1:79170393-79170412 | Msa0378410:intron | 50.0% |
CGGACCAATAACTCAGGATC+CGG | - | chr3_1:79170431-79170450 | None:intergenic | 50.0% | |
ATCCTGAGTTATTGGTCCGC+TGG | + | chr3_1:79170432-79170451 | Msa0378410:CDS | 50.0% | |
TACCAGCGGACCAATAACTC+AGG | - | chr3_1:79170437-79170456 | None:intergenic | 50.0% | |
AAGCTCCTAACTGGTACCAG+CGG | - | chr3_1:79170451-79170470 | None:intergenic | 50.0% | |
! | AGACTTTTCCCCACATGCTC+AGG | + | chr3_1:79170884-79170903 | Msa0378410:intron | 50.0% |
! | GACTTTTCCCCACATGCTCA+GGG | + | chr3_1:79170885-79170904 | Msa0378410:intron | 50.0% |
! | ACTTTTCCCCACATGCTCAG+GGG | + | chr3_1:79170886-79170905 | Msa0378410:intron | 50.0% |
TTCAGGGAGGCTAACACTAC+TGG | + | chr3_1:79171148-79171167 | Msa0378410:CDS | 50.0% | |
TAACACTACTGGCGTTCCTG+TGG | + | chr3_1:79171159-79171178 | Msa0378410:CDS | 50.0% | |
TTTCTTCCAGGAGAAGACGG+TGG | - | chr3_1:79167497-79167516 | None:intergenic | 50.0% | |
ATCGAGCGCGTTTGCAGAAT+GGG | - | chr3_1:79167546-79167565 | None:intergenic | 50.0% | |
ACGGAGAGAGTGAGGAGTAA+GGG | - | chr3_1:79167673-79167692 | None:intergenic | 50.0% | |
AACGGAGAGAGTGAGGAGTA+AGG | - | chr3_1:79167674-79167693 | None:intergenic | 50.0% | |
CTTGATGAACGGAGAGAGTG+AGG | - | chr3_1:79167681-79167700 | None:intergenic | 50.0% | |
TTTCGTCGATGATGAGACGG+AGG | - | chr3_1:79167711-79167730 | None:intergenic | 50.0% | |
AATTGCGAAACGACGACGTC+GGG | - | chr3_1:79167769-79167788 | None:intergenic | 50.0% | |
GAATTGCGAAACGACGACGT+CGG | - | chr3_1:79167770-79167789 | None:intergenic | 50.0% | |
!! | TGGAAGCCAGAGTTTGGTGT+TGG | - | chr3_1:79167794-79167813 | None:intergenic | 50.0% |
GATTACAGCGGAGTAACCGT+CGG | - | chr3_1:79167866-79167885 | None:intergenic | 50.0% | |
TTCATCCGCGACGATAACTC+CGG | + | chr3_1:79167907-79167926 | Msa0378410:CDS | 50.0% | |
AATGGAAATTACCCGGTCGC+CGG | - | chr3_1:79167929-79167948 | None:intergenic | 50.0% | |
GCAAGACTCGTAGCATGTTC+GGG | - | chr3_1:79168111-79168130 | None:intergenic | 50.0% | |
CGCAAGACTCGTAGCATGTT+CGG | - | chr3_1:79168112-79168131 | None:intergenic | 50.0% | |
CTTGCGTTGAAACCTACCAG+AGG | + | chr3_1:79168126-79168145 | Msa0378410:CDS | 50.0% | |
TGCTTTCTCACGGTAAAGCG+AGG | + | chr3_1:79168250-79168269 | Msa0378410:CDS | 50.0% | |
GCTTTCTCACGGTAAAGCGA+GGG | + | chr3_1:79168251-79168270 | Msa0378410:CDS | 50.0% | |
CTTTCTCACGGTAAAGCGAG+GGG | + | chr3_1:79168252-79168271 | Msa0378410:CDS | 50.0% | |
TTTCTCACGGTAAAGCGAGG+GGG | + | chr3_1:79168253-79168272 | Msa0378410:CDS | 50.0% | |
!!! | GGGGGACCAATGGTTTTTTC+TGG | + | chr3_1:79168271-79168290 | Msa0378410:CDS | 50.0% |
ACGATGTGGATGAGTGAAGC+TGG | + | chr3_1:79168387-79168406 | Msa0378410:CDS | 50.0% | |
CTCAAAACATCTTTCGGCCG+CGG | - | chr3_1:79168441-79168460 | None:intergenic | 50.0% | |
GAGACAGTATGCTGCTGTGA+CGG | + | chr3_1:79168458-79168477 | Msa0378410:CDS | 50.0% | |
AGACAGTATGCTGCTGTGAC+GGG | + | chr3_1:79168459-79168478 | Msa0378410:CDS | 50.0% | |
! | TGGCTTATCATCAGTGTCGG+TGG | + | chr3_1:79168511-79168530 | Msa0378410:CDS | 50.0% |
!! | CATAAGGAGGCGTCAGAGAA+AGG | + | chr3_1:79168768-79168787 | Msa0378410:CDS | 50.0% |
GCCCACCATGACCTAATTTC+AGG | - | chr3_1:79168876-79168895 | None:intergenic | 50.0% | |
GTTCACAGTGGAAACGCACT+AGG | - | chr3_1:79169557-79169576 | None:intergenic | 50.0% | |
TCACGGTGTGAAGGTGAGTT+TGG | - | chr3_1:79169608-79169627 | None:intergenic | 50.0% | |
CGGGTCATTGTGGGTGAATT+CGG | - | chr3_1:79169776-79169795 | None:intergenic | 50.0% | |
AGAGTCAGAATTGCGGACAC+AGG | - | chr3_1:79169833-79169852 | None:intergenic | 50.0% | |
! | CATCTCTAGGCATTGTCACC+TGG | - | chr3_1:79169987-79170006 | None:intergenic | 50.0% |
CGGGAGTTGCATAATGCCTA+TGG | + | chr3_1:79170033-79170052 | Msa0378410:CDS | 50.0% | |
TCTGAAGGGCTATTGAAGCG+TGG | + | chr3_1:79170078-79170097 | Msa0378410:CDS | 50.0% | |
GGCTATTGAAGCGTGGTGAA+GGG | + | chr3_1:79170085-79170104 | Msa0378410:CDS | 50.0% | |
! | TGGCGATAACTCTGCCGATT+GGG | + | chr3_1:79170176-79170195 | Msa0378410:CDS | 50.0% |
TGACATCCCGGTAAGACCAA+GGG | - | chr3_1:79170235-79170254 | None:intergenic | 50.0% | |
ATGACATCCCGGTAAGACCA+AGG | - | chr3_1:79170236-79170255 | None:intergenic | 50.0% | |
CTTACCGGGATGTCATTCTC+TGG | + | chr3_1:79170240-79170259 | Msa0378410:CDS | 50.0% | |
CTGACCAGAGAATGACATCC+CGG | - | chr3_1:79170247-79170266 | None:intergenic | 50.0% | |
!! | TATGCAGGTGCTGATGTTGG+TGG | + | chr3_1:79170392-79170411 | Msa0378410:intron | 50.0% |
!! | ATGCAGGTGCTGATGTTGGT+GGG | + | chr3_1:79170393-79170412 | Msa0378410:intron | 50.0% |
CGGACCAATAACTCAGGATC+CGG | - | chr3_1:79170431-79170450 | None:intergenic | 50.0% | |
ATCCTGAGTTATTGGTCCGC+TGG | + | chr3_1:79170432-79170451 | Msa0378410:CDS | 50.0% | |
TACCAGCGGACCAATAACTC+AGG | - | chr3_1:79170437-79170456 | None:intergenic | 50.0% | |
AAGCTCCTAACTGGTACCAG+CGG | - | chr3_1:79170451-79170470 | None:intergenic | 50.0% | |
! | AGACTTTTCCCCACATGCTC+AGG | + | chr3_1:79170884-79170903 | Msa0378410:intron | 50.0% |
! | GACTTTTCCCCACATGCTCA+GGG | + | chr3_1:79170885-79170904 | Msa0378410:intron | 50.0% |
! | ACTTTTCCCCACATGCTCAG+GGG | + | chr3_1:79170886-79170905 | Msa0378410:intron | 50.0% |
TTCAGGGAGGCTAACACTAC+TGG | + | chr3_1:79171148-79171167 | Msa0378410:CDS | 50.0% | |
TAACACTACTGGCGTTCCTG+TGG | + | chr3_1:79171159-79171178 | Msa0378410:CDS | 50.0% | |
GGAGTGTGAAACGCAGCGTT+TGG | - | chr3_1:79167459-79167478 | None:intergenic | 55.0% | |
CGGTGGTGCAGAGAAGAAGA+AGG | - | chr3_1:79167480-79167499 | None:intergenic | 55.0% | |
CGCGTTTGCAGAATGGGGTT+TGG | - | chr3_1:79167540-79167559 | None:intergenic | 55.0% | |
TCGAGCGCGTTTGCAGAATG+GGG | - | chr3_1:79167545-79167564 | None:intergenic | 55.0% | |
GATCGAGCGCGTTTGCAGAA+TGG | - | chr3_1:79167547-79167566 | None:intergenic | 55.0% | |
GATGAGGTCAGAGGAACCAG+GGG | - | chr3_1:79167575-79167594 | None:intergenic | 55.0% | |
CGATGAGGTCAGAGGAACCA+GGG | - | chr3_1:79167576-79167595 | None:intergenic | 55.0% | |
! | CGGGTTGGGATTTGGGGATT+AGG | - | chr3_1:79167639-79167658 | None:intergenic | 55.0% |
!! | GACGTGGAAGCGTTTCTTGG+AGG | - | chr3_1:79167746-79167765 | None:intergenic | 55.0% |
ATTGCGAAACGACGACGTCG+GGG | - | chr3_1:79167768-79167787 | None:intergenic | 55.0% | |
GATGCGTGGAAGCCAGAGTT+TGG | - | chr3_1:79167800-79167819 | None:intergenic | 55.0% | |
!! | CGGATCGTGACGGATTACAG+CGG | - | chr3_1:79167878-79167897 | None:intergenic | 55.0% |
CTCTGGTTGGGATGCTGAGT+CGG | + | chr3_1:79168329-79168348 | Msa0378410:CDS | 55.0% | |
TCTGGTTGGGATGCTGAGTC+GGG | + | chr3_1:79168330-79168349 | Msa0378410:CDS | 55.0% | |
AAGGCGCATGGTTACCATCG+TGG | + | chr3_1:79168710-79168729 | Msa0378410:CDS | 55.0% | |
!! | TTTGATGGTTGGTGCTGGCC+TGG | + | chr3_1:79168822-79168841 | Msa0378410:CDS | 55.0% |
! | GCCTGGTTCTTCGTCCTATC+CGG | + | chr3_1:79168839-79168858 | Msa0378410:CDS | 55.0% |
TCCGGATAGGACGAAGAACC+AGG | - | chr3_1:79168843-79168862 | None:intergenic | 55.0% | |
AACGCACTAGGACGCGAGAA+TGG | - | chr3_1:79169545-79169564 | None:intergenic | 55.0% | |
GCCCTTCAGATGTTGCCATG+TGG | - | chr3_1:79170068-79170087 | None:intergenic | 55.0% | |
GGGCTATTGAAGCGTGGTGA+AGG | + | chr3_1:79170084-79170103 | Msa0378410:CDS | 55.0% | |
AGCGTGGTGAAGGGAAAGAC+AGG | + | chr3_1:79170094-79170113 | Msa0378410:CDS | 55.0% | |
CTGGCGATAACTCTGCCGAT+TGG | + | chr3_1:79170175-79170194 | Msa0378410:CDS | 55.0% | |
TTGGTCCGCTGGTACCAGTT+AGG | + | chr3_1:79170443-79170462 | Msa0378410:CDS | 55.0% | |
TGGGCATGGGCCCTAAAGAA+AGG | - | chr3_1:79170479-79170498 | None:intergenic | 55.0% | |
! | CTTTTCCCCACATGCTCAGG+GGG | + | chr3_1:79170887-79170906 | Msa0378410:intron | 55.0% |
! | TTTTCCCCACATGCTCAGGG+GGG | + | chr3_1:79170888-79170907 | Msa0378410:intron | 55.0% |
TTAACCCCCCTGAGCATGTG+GGG | - | chr3_1:79170895-79170914 | None:intergenic | 55.0% | |
CTTAACCCCCCTGAGCATGT+GGG | - | chr3_1:79170896-79170915 | None:intergenic | 55.0% | |
ACTTAACCCCCCTGAGCATG+TGG | - | chr3_1:79170897-79170916 | None:intergenic | 55.0% | |
TTCCTGTGGCCCGTCCATTA+TGG | + | chr3_1:79171173-79171192 | Msa0378410:CDS | 55.0% | |
!! | ATCCATAATGGACGGGCCAC+AGG | - | chr3_1:79171178-79171197 | None:intergenic | 55.0% |
TGTGGCCCGTCCATTATGGA+TGG | + | chr3_1:79171177-79171196 | Msa0378410:CDS | 55.0% | |
GGAGTGTGAAACGCAGCGTT+TGG | - | chr3_1:79167459-79167478 | None:intergenic | 55.0% | |
CGGTGGTGCAGAGAAGAAGA+AGG | - | chr3_1:79167480-79167499 | None:intergenic | 55.0% | |
CGCGTTTGCAGAATGGGGTT+TGG | - | chr3_1:79167540-79167559 | None:intergenic | 55.0% | |
TCGAGCGCGTTTGCAGAATG+GGG | - | chr3_1:79167545-79167564 | None:intergenic | 55.0% | |
GATCGAGCGCGTTTGCAGAA+TGG | - | chr3_1:79167547-79167566 | None:intergenic | 55.0% | |
GATGAGGTCAGAGGAACCAG+GGG | - | chr3_1:79167575-79167594 | None:intergenic | 55.0% | |
CGATGAGGTCAGAGGAACCA+GGG | - | chr3_1:79167576-79167595 | None:intergenic | 55.0% | |
! | CGGGTTGGGATTTGGGGATT+AGG | - | chr3_1:79167639-79167658 | None:intergenic | 55.0% |
!! | GACGTGGAAGCGTTTCTTGG+AGG | - | chr3_1:79167746-79167765 | None:intergenic | 55.0% |
ATTGCGAAACGACGACGTCG+GGG | - | chr3_1:79167768-79167787 | None:intergenic | 55.0% | |
GATGCGTGGAAGCCAGAGTT+TGG | - | chr3_1:79167800-79167819 | None:intergenic | 55.0% | |
!! | CGGATCGTGACGGATTACAG+CGG | - | chr3_1:79167878-79167897 | None:intergenic | 55.0% |
CTCTGGTTGGGATGCTGAGT+CGG | + | chr3_1:79168329-79168348 | Msa0378410:CDS | 55.0% | |
TCTGGTTGGGATGCTGAGTC+GGG | + | chr3_1:79168330-79168349 | Msa0378410:CDS | 55.0% | |
AAGGCGCATGGTTACCATCG+TGG | + | chr3_1:79168710-79168729 | Msa0378410:CDS | 55.0% | |
!! | TTTGATGGTTGGTGCTGGCC+TGG | + | chr3_1:79168822-79168841 | Msa0378410:CDS | 55.0% |
! | GCCTGGTTCTTCGTCCTATC+CGG | + | chr3_1:79168839-79168858 | Msa0378410:CDS | 55.0% |
TCCGGATAGGACGAAGAACC+AGG | - | chr3_1:79168843-79168862 | None:intergenic | 55.0% | |
AACGCACTAGGACGCGAGAA+TGG | - | chr3_1:79169545-79169564 | None:intergenic | 55.0% | |
GCCCTTCAGATGTTGCCATG+TGG | - | chr3_1:79170068-79170087 | None:intergenic | 55.0% | |
GGGCTATTGAAGCGTGGTGA+AGG | + | chr3_1:79170084-79170103 | Msa0378410:CDS | 55.0% | |
AGCGTGGTGAAGGGAAAGAC+AGG | + | chr3_1:79170094-79170113 | Msa0378410:CDS | 55.0% | |
CTGGCGATAACTCTGCCGAT+TGG | + | chr3_1:79170175-79170194 | Msa0378410:CDS | 55.0% | |
TTGGTCCGCTGGTACCAGTT+AGG | + | chr3_1:79170443-79170462 | Msa0378410:CDS | 55.0% | |
TGGGCATGGGCCCTAAAGAA+AGG | - | chr3_1:79170479-79170498 | None:intergenic | 55.0% | |
! | CTTTTCCCCACATGCTCAGG+GGG | + | chr3_1:79170887-79170906 | Msa0378410:intron | 55.0% |
! | TTTTCCCCACATGCTCAGGG+GGG | + | chr3_1:79170888-79170907 | Msa0378410:intron | 55.0% |
TTAACCCCCCTGAGCATGTG+GGG | - | chr3_1:79170895-79170914 | None:intergenic | 55.0% | |
CTTAACCCCCCTGAGCATGT+GGG | - | chr3_1:79170896-79170915 | None:intergenic | 55.0% | |
ACTTAACCCCCCTGAGCATG+TGG | - | chr3_1:79170897-79170916 | None:intergenic | 55.0% | |
TTCCTGTGGCCCGTCCATTA+TGG | + | chr3_1:79171173-79171192 | Msa0378410:CDS | 55.0% | |
!! | ATCCATAATGGACGGGCCAC+AGG | - | chr3_1:79171178-79171197 | None:intergenic | 55.0% |
TGTGGCCCGTCCATTATGGA+TGG | + | chr3_1:79171177-79171196 | Msa0378410:CDS | 55.0% | |
TCTGCACCACCGTCTTCTCC+TGG | + | chr3_1:79167488-79167507 | Msa0378410:CDS | 60.0% | |
GCGATGAGGTCAGAGGAACC+AGG | - | chr3_1:79167577-79167596 | None:intergenic | 60.0% | |
ACCCACGTCACCATCTCCGA+CGG | + | chr3_1:79167598-79167617 | Msa0378410:CDS | 60.0% | |
GTTAGCGGTGAGATCGCCGT+CGG | - | chr3_1:79167617-79167636 | None:intergenic | 60.0% | |
!! | GGGGACGTGGAAGCGTTTCT+TGG | - | chr3_1:79167749-79167768 | None:intergenic | 60.0% |
GGTAAAGCGAGGGGGACCAA+TGG | + | chr3_1:79168261-79168280 | Msa0378410:CDS | 60.0% | |
CGACTCAGCATCCCAACCAG+AGG | - | chr3_1:79168331-79168350 | None:intergenic | 60.0% | |
CTGGTTGGGATGCTGAGTCG+GGG | + | chr3_1:79168331-79168350 | Msa0378410:CDS | 60.0% | |
! | CAGTATGCTGCTGTGACGGG+AGG | + | chr3_1:79168462-79168481 | Msa0378410:CDS | 60.0% |
! | TGCTGCTGTGACGGGAGGTT+CGG | + | chr3_1:79168467-79168486 | Msa0378410:CDS | 60.0% |
! | GGATGGTAAGGGAAGGCGCA+TGG | + | chr3_1:79168698-79168717 | Msa0378410:CDS | 60.0% |
TCTGCACCACCGTCTTCTCC+TGG | + | chr3_1:79167488-79167507 | Msa0378410:CDS | 60.0% | |
GCGATGAGGTCAGAGGAACC+AGG | - | chr3_1:79167577-79167596 | None:intergenic | 60.0% | |
ACCCACGTCACCATCTCCGA+CGG | + | chr3_1:79167598-79167617 | Msa0378410:CDS | 60.0% | |
GTTAGCGGTGAGATCGCCGT+CGG | - | chr3_1:79167617-79167636 | None:intergenic | 60.0% | |
!! | GGGGACGTGGAAGCGTTTCT+TGG | - | chr3_1:79167749-79167768 | None:intergenic | 60.0% |
GGTAAAGCGAGGGGGACCAA+TGG | + | chr3_1:79168261-79168280 | Msa0378410:CDS | 60.0% | |
CGACTCAGCATCCCAACCAG+AGG | - | chr3_1:79168331-79168350 | None:intergenic | 60.0% | |
CTGGTTGGGATGCTGAGTCG+GGG | + | chr3_1:79168331-79168350 | Msa0378410:CDS | 60.0% | |
! | CAGTATGCTGCTGTGACGGG+AGG | + | chr3_1:79168462-79168481 | Msa0378410:CDS | 60.0% |
! | TGCTGCTGTGACGGGAGGTT+CGG | + | chr3_1:79168467-79168486 | Msa0378410:CDS | 60.0% |
! | GGATGGTAAGGGAAGGCGCA+TGG | + | chr3_1:79168698-79168717 | Msa0378410:CDS | 60.0% |
GTGGGTGGCGATGAGGTCAG+AGG | - | chr3_1:79167584-79167603 | None:intergenic | 65.0% | |
! | TGGTGACGTGGGTGGCGATG+AGG | - | chr3_1:79167591-79167610 | None:intergenic | 65.0% |
! | GTCGGAGATGGTGACGTGGG+TGG | - | chr3_1:79167599-79167618 | None:intergenic | 65.0% |
! | GCCGTCGGAGATGGTGACGT+GGG | - | chr3_1:79167602-79167621 | None:intergenic | 65.0% |
GGTGAGATCGCCGTCGGAGA+TGG | - | chr3_1:79167611-79167630 | None:intergenic | 65.0% | |
AAACGACGACGTCGGGGACG+TGG | - | chr3_1:79167762-79167781 | None:intergenic | 65.0% | |
CAGCGGAGTAACCGTCGGAG+AGG | - | chr3_1:79167861-79167880 | None:intergenic | 65.0% | |
GGTCGCCGGAGTTATCGTCG+CGG | - | chr3_1:79167915-79167934 | None:intergenic | 65.0% | |
GCGACGATAACTCCGGCGAC+CGG | + | chr3_1:79167914-79167933 | Msa0378410:CDS | 65.0% | |
CGACGATAACTCCGGCGACC+GGG | + | chr3_1:79167915-79167934 | Msa0378410:CDS | 65.0% | |
GTGGGTGGCGATGAGGTCAG+AGG | - | chr3_1:79167584-79167603 | None:intergenic | 65.0% | |
! | TGGTGACGTGGGTGGCGATG+AGG | - | chr3_1:79167591-79167610 | None:intergenic | 65.0% |
! | GTCGGAGATGGTGACGTGGG+TGG | - | chr3_1:79167599-79167618 | None:intergenic | 65.0% |
! | GCCGTCGGAGATGGTGACGT+GGG | - | chr3_1:79167602-79167621 | None:intergenic | 65.0% |
GGTGAGATCGCCGTCGGAGA+TGG | - | chr3_1:79167611-79167630 | None:intergenic | 65.0% | |
AAACGACGACGTCGGGGACG+TGG | - | chr3_1:79167762-79167781 | None:intergenic | 65.0% | |
CAGCGGAGTAACCGTCGGAG+AGG | - | chr3_1:79167861-79167880 | None:intergenic | 65.0% | |
GGTCGCCGGAGTTATCGTCG+CGG | - | chr3_1:79167915-79167934 | None:intergenic | 65.0% | |
GCGACGATAACTCCGGCGAC+CGG | + | chr3_1:79167914-79167933 | Msa0378410:CDS | 65.0% | |
CGACGATAACTCCGGCGACC+GGG | + | chr3_1:79167915-79167934 | Msa0378410:CDS | 65.0% | |
! | CGCCGTCGGAGATGGTGACG+TGG | - | chr3_1:79167603-79167622 | None:intergenic | 70.0% |
! | CGCCGTCGGAGATGGTGACG+TGG | - | chr3_1:79167603-79167622 | None:intergenic | 70.0% |
CGCGCTCGATCTCGCTCCCC+TGG | + | chr3_1:79167556-79167575 | Msa0378410:CDS | 75.0% | |
CGCGCTCGATCTCGCTCCCC+TGG | + | chr3_1:79167556-79167575 | Msa0378410:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 79167209 | 79171294 | 79167209 | ID=Msa0378410;Name=Msa0378410 |
chr3_1 | mRNA | 79167209 | 79171294 | 79167209 | ID=Msa0378410-mRNA-1;Parent=Msa0378410;Name=Msa0378410-mRNA-1;_AED=0.01;_eAED=0.01;_QI=239|1|0.75|1|1|1|4|0|723 |
chr3_1 | exon | 79167209 | 79168989 | 79167209 | ID=Msa0378410-mRNA-1:exon:19276;Parent=Msa0378410-mRNA-1 |
chr3_1 | exon | 79169988 | 79170261 | 79169988 | ID=Msa0378410-mRNA-1:exon:19277;Parent=Msa0378410-mRNA-1 |
chr3_1 | exon | 79170399 | 79170534 | 79170399 | ID=Msa0378410-mRNA-1:exon:19278;Parent=Msa0378410-mRNA-1 |
chr3_1 | exon | 79171075 | 79171294 | 79171075 | ID=Msa0378410-mRNA-1:exon:19279;Parent=Msa0378410-mRNA-1 |
chr3_1 | five_prime_UTR | 79167209 | 79167447 | 79167209 | ID=Msa0378410-mRNA-1:five_prime_utr;Parent=Msa0378410-mRNA-1 |
chr3_1 | CDS | 79167448 | 79168989 | 79167448 | ID=Msa0378410-mRNA-1:cds;Parent=Msa0378410-mRNA-1 |
chr3_1 | CDS | 79169988 | 79170261 | 79169988 | ID=Msa0378410-mRNA-1:cds;Parent=Msa0378410-mRNA-1 |
chr3_1 | CDS | 79170399 | 79170534 | 79170399 | ID=Msa0378410-mRNA-1:cds;Parent=Msa0378410-mRNA-1 |
chr3_1 | CDS | 79171075 | 79171294 | 79171075 | ID=Msa0378410-mRNA-1:cds;Parent=Msa0378410-mRNA-1 |
Gene Sequence |
Protein sequence |