Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435640 | AES89389.2 | 77.900 | 638 | 107 | 12 | 1 | 625 | 1 | 617 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435640 | sp|O74828|ESF1_SCHPO | 31.195 | 686 | 361 | 23 | 20 | 619 | 19 | 679 | 9.97e-67 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435640 | G7JNE8 | 77.900 | 638 | 107 | 12 | 1 | 625 | 1 | 617 | 0.0 | 856 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1429850 | Msa1435640 | 0.817604 | 3.025847e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435640 | MtrunA17_Chr4g0037051 | 79.228 | 337 | 58 | 6 | 1 | 330 | 1 | 332 | 7.65e-167 | 482 |
| Msa1435640 | MtrunA17_Chr4g0052231 | 51.067 | 656 | 234 | 20 | 18 | 606 | 47 | 682 | 3.16e-162 | 483 |
| Msa1435640 | MtrunA17_Chr4g0037061 | 71.692 | 325 | 56 | 6 | 328 | 625 | 12 | 327 | 2.87e-124 | 372 |
| Msa1435640 | MtrunA17_Chr3g0137801 | 90.323 | 124 | 12 | 0 | 364 | 487 | 1 | 124 | 5.06e-61 | 199 |
| Msa1435640 | MtrunA17_Chr3g0137811 | 78.182 | 110 | 11 | 3 | 520 | 624 | 1 | 102 | 3.33e-47 | 162 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435640 | AT3G01160.1 | 40.090 | 666 | 283 | 21 | 20 | 604 | 30 | 660 | 2.24e-124 | 385 |
Find 119 sgRNAs with CRISPR-Local
Find 515 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTAGTCCACTTGATTTA+AGG | 0.103671 | tig0027765:+18830 | Msa1435640:CDS |
| TATCTTAGTTTGGTCTATTC+AGG | 0.231031 | tig0027765:+22664 | Msa1435640:CDS |
| GAAGAAGAGAAGAAGGAAAC+AGG | 0.248873 | tig0027765:+16992 | Msa1435640:CDS |
| CCTTGTCTGACCATCTTGAT+TGG | 0.265105 | tig0027765:-23873 | None:intergenic |
| TAAGGTTTATTCCTGACATT+TGG | 0.265200 | tig0027765:+18848 | Msa1435640:CDS |
| AACTACGTAGTCAAAGATTT+TGG | 0.274407 | tig0027765:+18991 | Msa1435640:CDS |
| GCTGTCTATCCAACTGAGTT+TGG | 0.281054 | tig0027765:+17441 | Msa1435640:CDS |
| CCCACCAATCCACAATTAAA+AGG | 0.300298 | tig0027765:+23237 | Msa1435640:CDS |
| CTGTCTATCCAACTGAGTTT+GGG | 0.310560 | tig0027765:+17442 | Msa1435640:CDS |
| AAAAGACATTTGCATTACTT+TGG | 0.325778 | tig0027765:-23754 | None:intergenic |
| ATTTAGCATGGTGCTAAATA+AGG | 0.333267 | tig0027765:-24041 | None:intergenic |
| ACAAGATATGTATCTTAGTT+TGG | 0.334345 | tig0027765:+22654 | Msa1435640:CDS |
| ATGGAGGTGACCTTCCATTC+AGG | 0.349398 | tig0027765:+22730 | Msa1435640:CDS |
| AAAAGAAGAAGAAGAGAAGA+AGG | 0.350053 | tig0027765:+16985 | Msa1435640:CDS |
| AAAGACATTTGCATTACTTT+GGG | 0.354034 | tig0027765:-23753 | None:intergenic |
| AAGAAGGAAACAGGGATTGA+TGG | 0.363837 | tig0027765:+17001 | Msa1435640:CDS |
| CTTCTTCTACTTTGTAGTAA+TGG | 0.364768 | tig0027765:-16962 | None:intergenic |
| TAACTATCTATCGTGTTGAT+TGG | 0.369307 | tig0027765:-23955 | None:intergenic |
| AAACAGTTTGGGAAGCATTT+CGG | 0.373490 | tig0027765:+22803 | Msa1435640:CDS |
| ATAAAAGATCAGAAACAGTT+TGG | 0.382446 | tig0027765:+22791 | Msa1435640:CDS |
| CTTAAAAGGTGACTTTGAAA+TGG | 0.388321 | tig0027765:+23573 | Msa1435640:intron |
| ACATAATAACCTCCAACATA+TGG | 0.408222 | tig0027765:+22987 | Msa1435640:CDS |
| AAGGTTTATTCCTGACATTT+GGG | 0.408401 | tig0027765:+18849 | Msa1435640:CDS |
| GCTTTAATAGCTTGCTCAGT+TGG | 0.409614 | tig0027765:+22546 | Msa1435640:intron |
| CCGCATCCTGCTCTTCTGAT+AGG | 0.410075 | tig0027765:-17559 | None:intergenic |
| TGACATTTGGGAATTCAAAC+AGG | 0.431467 | tig0027765:+18861 | Msa1435640:CDS |
| GGGAAGCATTTCGGAGGAAA+AGG | 0.439702 | tig0027765:+22812 | Msa1435640:CDS |
| TAAAAGATCAGAAACAGTTT+GGG | 0.450088 | tig0027765:+22792 | Msa1435640:CDS |
| AAGAAAATTTACTGATGAGC+AGG | 0.451778 | tig0027765:+19089 | Msa1435640:CDS |
| AGGAGTCCACATCGTAGATA+TGG | 0.452465 | tig0027765:-24017 | None:intergenic |
| ATTTGATCATTCCATTCGTT+GGG | 0.460852 | tig0027765:-17413 | None:intergenic |
| TCATCACTATATGTACTGTT+TGG | 0.467432 | tig0027765:-23168 | None:intergenic |
| GAAGGATAAGAAAGAAGGAT+TGG | 0.467803 | tig0027765:+23791 | Msa1435640:CDS |
| GTTGGAATGGAAAGAATACT+TGG | 0.472915 | tig0027765:+22564 | Msa1435640:CDS |
| TACTGACACGCTTGATATGC+AGG | 0.477038 | tig0027765:+17100 | Msa1435640:CDS |
| AGTTTGGTCTATTCAGGCAA+TGG | 0.477065 | tig0027765:+22670 | Msa1435640:CDS |
| TCAGAAGTGCTGCATATGTC+AGG | 0.485957 | tig0027765:+23685 | Msa1435640:intron |
| ATGATGATCCCTTTCGCAAA+AGG | 0.486579 | tig0027765:+19058 | Msa1435640:CDS |
| TGTTTGAATTCCCAAATGTC+AGG | 0.487735 | tig0027765:-18859 | None:intergenic |
| GGAAGGTCACCTCCATCTCT+TGG | 0.492100 | tig0027765:-22723 | None:intergenic |
| AATTCATTTGTCCCAACGAA+TGG | 0.492101 | tig0027765:+17402 | Msa1435640:CDS |
| TTCTTCCTCTTCTTAGCACA+AGG | 0.493874 | tig0027765:-22937 | None:intergenic |
| GATTTGATCATTCCATTCGT+TGG | 0.497978 | tig0027765:-17414 | None:intergenic |
| TTAGACATTCCAATCCTGAA+TGG | 0.500488 | tig0027765:-22744 | None:intergenic |
| AATAGCTTGCTCAGTTGGAA+TGG | 0.502815 | tig0027765:+22551 | Msa1435640:intron |
| GGGAATTCAAACAGGAGCCT+AGG | 0.504845 | tig0027765:+18869 | Msa1435640:CDS |
| GATGACAAGAGGATAGAAAC+TGG | 0.506109 | tig0027765:+23063 | Msa1435640:CDS |
| TGCGTGCCTATCAGAAGAGC+AGG | 0.506500 | tig0027765:+17553 | Msa1435640:CDS |
| GTGGGATCAATAGCATAGTC+AGG | 0.508043 | tig0027765:-23219 | None:intergenic |
| GATGGTCAGACAAGGAAAGA+TGG | 0.511671 | tig0027765:+23881 | Msa1435640:CDS |
| GGTGACCTTCCATTCAGGAT+TGG | 0.516982 | tig0027765:+22735 | Msa1435640:CDS |
| TGATTGAGAAAGATACTCAT+AGG | 0.520942 | tig0027765:+17244 | Msa1435640:CDS |
| ACACAAGCAGAAGGGTCAAA+TGG | 0.522132 | tig0027765:+23719 | Msa1435640:CDS |
| GAGGATAGAAACTGGTCTCA+AGG | 0.527889 | tig0027765:+23071 | Msa1435640:CDS |
| GGCCTGCCTCTCTTGTCGAT+TGG | 0.527987 | tig0027765:-16900 | None:intergenic |
| GCAGCTAGCACACAAGCAGA+AGG | 0.534408 | tig0027765:+23710 | Msa1435640:CDS |
| CACATTTACAAAGAATGTAA+TGG | 0.534661 | tig0027765:+18796 | Msa1435640:CDS |
| AACGAATGGAATGATCAAAT+CGG | 0.535386 | tig0027765:+17416 | Msa1435640:CDS |
| AAGAAGAGAAGAAGGAAACA+GGG | 0.536786 | tig0027765:+16993 | Msa1435640:CDS |
| ATGCAGAAGGATAAGAAAGA+AGG | 0.537357 | tig0027765:+23786 | Msa1435640:CDS |
| ACATATTTGGTATGAAATCG+TGG | 0.538508 | tig0027765:+16694 | None:intergenic |
| AGCAGATGAATTCTTCATTG+AGG | 0.539702 | tig0027765:+22912 | Msa1435640:CDS |
| TTTGTAAATGTGAGCTGCTG+TGG | 0.539886 | tig0027765:-18785 | None:intergenic |
| TGGGCTTCAACGTATGAAAG+AGG | 0.540071 | tig0027765:+17461 | Msa1435640:CDS |
| CACCAATCGACAAGAGAGGC+AGG | 0.541791 | tig0027765:+16898 | Msa1435640:CDS |
| TAACAGTGAGACTGATGATC+AGG | 0.542635 | tig0027765:+22612 | Msa1435640:CDS |
| GGAGAATGTTATTATTGATG+AGG | 0.542911 | tig0027765:+23137 | Msa1435640:CDS |
| CGTTGAAGCCCAAACTCAGT+TGG | 0.548103 | tig0027765:-17450 | None:intergenic |
| CAGCAACCATGTCCATATGT+TGG | 0.549168 | tig0027765:-22999 | None:intergenic |
| GGAATAAACCTTAAATCAAG+TGG | 0.549824 | tig0027765:-18838 | None:intergenic |
| AAGGAAACAGGGATTGATGG+AGG | 0.553739 | tig0027765:+17004 | Msa1435640:CDS |
| TGATGATCAGGTTGATGAGA+AGG | 0.554035 | tig0027765:+22624 | Msa1435640:CDS |
| AGGATAGAAACTGGTCTCAA+GGG | 0.554727 | tig0027765:+23072 | Msa1435640:CDS |
| TGAGAAAGATACTCATAGGC+TGG | 0.559647 | tig0027765:+17248 | Msa1435640:CDS |
| GAGAATGTTATTATTGATGA+GGG | 0.560141 | tig0027765:+23138 | Msa1435640:CDS |
| TAGGCTGGCTGTTGTCAACA+TGG | 0.560464 | tig0027765:+17263 | Msa1435640:CDS |
| GGAATTCAAACAGGAGCCTA+GGG | 0.560571 | tig0027765:+18870 | Msa1435640:CDS |
| TGGCTGTTGTCAACATGGAC+TGG | 0.565171 | tig0027765:+17268 | Msa1435640:CDS |
| CAGGTTCTATCATGCTGTGG+TGG | 0.572382 | tig0027765:+18747 | Msa1435640:intron |
| AAGGAAGGACAAAATGGGGA+AGG | 0.573640 | tig0027765:+23116 | Msa1435640:CDS |
| AGGAACCTTGTGCTAAGAAG+AGG | 0.574343 | tig0027765:+22932 | Msa1435640:CDS |
| ACATGACGTTGGCCAAGAGA+TGG | 0.575828 | tig0027765:+22711 | Msa1435640:CDS |
| CAAAGCAGATCCAATCAAGA+TGG | 0.576704 | tig0027765:+23863 | Msa1435640:CDS |
| ACATTCCAATCCTGAATGGA+AGG | 0.577659 | tig0027765:-22740 | None:intergenic |
| AGATGGAAATCAAAATTTGA+AGG | 0.579525 | tig0027765:+23898 | Msa1435640:CDS |
| TTTAGAGCCTCTCGAAAACG+AGG | 0.584508 | tig0027765:-16801 | None:intergenic |
| CAACCATGTCCATATGTTGG+AGG | 0.589966 | tig0027765:-22996 | None:intergenic |
| GCCTAGGGATGTTGTGACAA+AGG | 0.591762 | tig0027765:+18885 | Msa1435640:CDS |
| GAAAATCAGATTTCAAAGTG+AGG | 0.592350 | tig0027765:-16935 | None:intergenic |
| TCTTTGACTACGTAGTTCGC+AGG | 0.593079 | tig0027765:-18985 | None:intergenic |
| ACCTTTGTCACAACATCCCT+AGG | 0.596897 | tig0027765:-18886 | None:intergenic |
| CTGCAGGTTCTATCATGCTG+TGG | 0.598849 | tig0027765:+18744 | Msa1435640:intron |
| CAGTTTGGGAAGCATTTCGG+AGG | 0.599530 | tig0027765:+22806 | Msa1435640:CDS |
| CAGCTAGCACACAAGCAGAA+GGG | 0.600301 | tig0027765:+23711 | Msa1435640:CDS |
| TATTGCTTGCTGATGACAAG+AGG | 0.600984 | tig0027765:+23052 | Msa1435640:CDS |
| AAAAGAAGCGCAACAAAACG+TGG | 0.602912 | tig0027765:-23192 | None:intergenic |
| GGCTCTAAAGAATGAAACAA+AGG | 0.605109 | tig0027765:+16815 | Msa1435640:CDS |
| CCAATCAAGATGGTCAGACA+AGG | 0.606384 | tig0027765:+23873 | Msa1435640:CDS |
| AGCATGGTGCTAAATAAGGA+AGG | 0.611384 | tig0027765:-24037 | None:intergenic |
| CATATTTGGTATGAAATCGT+GGG | 0.616683 | tig0027765:+16695 | None:intergenic |
| ATGGCTGCGGCATAATAGCA+TGG | 0.618236 | tig0027765:-23998 | None:intergenic |
| CCTATCAGAAGAGCAGGATG+CGG | 0.628504 | tig0027765:+17559 | Msa1435640:CDS |
| CCACATCGTAGATATGGCTG+CGG | 0.634262 | tig0027765:-24011 | None:intergenic |
| AGTCAAATGGAACAAATCCA+CGG | 0.635400 | tig0027765:-17491 | None:intergenic |
| TGACGTTGGCCAAGAGATGG+AGG | 0.643765 | tig0027765:+22714 | Msa1435640:CDS |
| ATGAAAGAGGAGAATAGCCG+TGG | 0.646240 | tig0027765:+17474 | Msa1435640:CDS |
| TATAAATTAGGAACTCGAAG+AGG | 0.658700 | tig0027765:+17215 | Msa1435640:intron |
| GAACACTGCATACAAGTCAA+CGG | 0.660177 | tig0027765:-17379 | None:intergenic |
| TCTAAAGAATGAAACAAAGG+TGG | 0.660637 | tig0027765:+16818 | Msa1435640:CDS |
| TAACCTCCAACATATGGACA+TGG | 0.663220 | tig0027765:+22993 | Msa1435640:CDS |
| CCGCAGCCATATCTACGATG+TGG | 0.664015 | tig0027765:+24011 | Msa1435640:three_prime_UTR |
| TTAGAGCCTCTCGAAAACGA+GGG | 0.685733 | tig0027765:-16800 | None:intergenic |
| ATGAGTGTGCATATTTAGCA+TGG | 0.685965 | tig0027765:-24053 | None:intergenic |
| TTACTGTGCAGAAGTACTCG+AGG | 0.689647 | tig0027765:-19015 | None:intergenic |
| AGAAGAGGAAGAAAGCACAA+AGG | 0.691103 | tig0027765:+22947 | Msa1435640:CDS |
| TCTGCACCAATCGACAAGAG+AGG | 0.697200 | tig0027765:+16894 | Msa1435640:CDS |
| GAAGATGCTGAACATGACGT+TGG | 0.698393 | tig0027765:+22700 | Msa1435640:CDS |
| GTGTGCACTCCTACAAAACG+AGG | 0.707117 | tig0027765:-16774 | None:intergenic |
| CATGGACTGGAACTATGTGA+AGG | 0.756163 | tig0027765:+17281 | Msa1435640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAAAAAAAAAAAAA+AGG | - | tig0027765:19936-19955 | None:intergenic | 0.0% |
| !!! | AATTAAAACTGAAAAATTTT+CGG | - | tig0027765:18235-18254 | None:intergenic | 10.0% |
| !!! | GAAAAAAAAAAATTTTTTGA+AGG | + | tig0027765:18326-18345 | Msa1435640:intron | 10.0% |
| !! | AAATCCTAATATTTATTATT+AGG | + | tig0027765:20035-20054 | Msa1435640:intron | 10.0% |
| !! | TAATCCTAATAATAAATATT+AGG | - | tig0027765:20042-20061 | None:intergenic | 10.0% |
| !!! | TAAAAAAATTTGTTTATTAG+TGG | + | tig0027765:21594-21613 | Msa1435640:intron | 10.0% |
| !! | ATATTATGTTAAACATAATA+AGG | + | tig0027765:21868-21887 | Msa1435640:intron | 10.0% |
| !! | ATGTCTAAATAAAAAATTAA+TGG | + | tig0027765:22759-22778 | Msa1435640:CDS | 10.0% |
| !! | TTAATAATCAATTAAAAGTT+TGG | - | tig0027765:23328-23347 | None:intergenic | 10.0% |
| !!! | TTTTGTTGTTGTTATAAATT+AGG | + | tig0027765:17203-17222 | Msa1435640:intron | 15.0% |
| !!! | ATCATTTTGTTTTTTGTTAT+AGG | + | tig0027765:17356-17375 | Msa1435640:intron | 15.0% |
| !!! | AAACTGAATTTTTTTTTTGA+AGG | - | tig0027765:18183-18202 | None:intergenic | 15.0% |
| !! | AAAAATCGCAAAAAAAAATT+GGG | - | tig0027765:18209-18228 | None:intergenic | 15.0% |
| !! | AAAAAATCGCAAAAAAAAAT+TGG | - | tig0027765:18210-18229 | None:intergenic | 15.0% |
| !!! | ATTAAAACTGAAAAATTTTC+GGG | - | tig0027765:18234-18253 | None:intergenic | 15.0% |
| !! | TTATGTTGTATGATAATAAT+TGG | + | tig0027765:18932-18951 | Msa1435640:intron | 15.0% |
| !! | TGGATAACATAAAAAAAAAA+TGG | + | tig0027765:19143-19162 | Msa1435640:intron | 15.0% |
| !!! | TTTTCAAATTTTTTAAGCTA+TGG | - | tig0027765:20781-20800 | Msa1435650:CDS | 15.0% |
| !! | ATAATGATTGACAAAATTAT+TGG | - | tig0027765:21519-21538 | None:intergenic | 15.0% |
| !!! | AATAATTTTGTCAATCATTA+TGG | + | tig0027765:21518-21537 | Msa1435640:intron | 15.0% |
| !! | TTATGTTTAACATAATATAG+TGG | - | tig0027765:21866-21885 | None:intergenic | 15.0% |
| !! | TTGAAATTTATCCATTAAAT+TGG | - | tig0027765:22092-22111 | None:intergenic | 15.0% |
| !! | AATGGATAAATTTCAAAATT+AGG | + | tig0027765:22096-22115 | Msa1435640:intron | 15.0% |
| !! | TAAAAAATTAATGGAAAAGA+AGG | + | tig0027765:22768-22787 | Msa1435640:CDS | 15.0% |
| !!! | ATACTTCAATTTATTTTTGT+TGG | - | tig0027765:22854-22873 | None:intergenic | 15.0% |
| !!! | TCTAAAATTTAAAAAAAGGA+AGG | + | tig0027765:23101-23120 | Msa1435640:CDS | 15.0% |
| !!! | TATATCTTGTTTAACTTAAA+AGG | + | tig0027765:23559-23578 | Msa1435640:intron | 15.0% |
| !! | TTGATATAATGATGCTTAAA+GGG | - | tig0027765:17753-17772 | None:intergenic | 20.0% |
| !! | AACAAAAAAAAAATAAGCCA+GGG | - | tig0027765:18155-18174 | None:intergenic | 20.0% |
| !! | AAACAAAAAAAAAATAAGCC+AGG | - | tig0027765:18156-18175 | None:intergenic | 20.0% |
| !!! | TTAAAACTGAAAAATTTTCG+GGG | - | tig0027765:18233-18252 | None:intergenic | 20.0% |
| !!! | ATTTTCTAAGATATACATTG+CGG | - | tig0027765:18610-18629 | None:intergenic | 20.0% |
| !! | GTAATTCACTATATTTATTG+TGG | + | tig0027765:19182-19201 | Msa1435640:intron | 20.0% |
| !! | ATAGAAATAATTGAGACTTT+CGG | - | tig0027765:19311-19330 | None:intergenic | 20.0% |
| !! | TTTATCATTTGTATAGACTT+GGG | - | tig0027765:19528-19547 | None:intergenic | 20.0% |
| !!! | TTTTATCATTTGTATAGACT+TGG | - | tig0027765:19529-19548 | None:intergenic | 20.0% |
| !! | ACAGATAAATAATAAAATGC+AGG | + | tig0027765:19971-19990 | Msa1435640:intron | 20.0% |
| !! | TTCTACCAAAATTATTGTAT+GGG | - | tig0027765:20005-20024 | None:intergenic | 20.0% |
| !! | ATTCTACCAAAATTATTGTA+TGG | - | tig0027765:20006-20025 | None:intergenic | 20.0% |
| !! | AAATTATGTTCAACCTAATA+AGG | - | tig0027765:20082-20101 | None:intergenic | 20.0% |
| !!! | TTATTAGGTTGAACATAATT+TGG | + | tig0027765:20081-20100 | Msa1435640:intron | 20.0% |
| !! | ATAGAAAAATTGTTTACTGT+TGG | - | tig0027765:20335-20354 | None:intergenic | 20.0% |
| !! | TTCTATCCAAATATGAATTA+GGG | - | tig0027765:20448-20467 | Msa1435650:intron | 20.0% |
| !! | TTTCTATCCAAATATGAATT+AGG | - | tig0027765:20449-20468 | Msa1435650:intron | 20.0% |
| !!! | TGAAAATTCGATTTTATACT+TGG | + | tig0027765:20795-20814 | Msa1435640:intron | 20.0% |
| !!! | GAAAATTCGATTTTATACTT+GGG | + | tig0027765:20796-20815 | Msa1435640:intron | 20.0% |
| !! | AAATTTGGTTATCCTATAAA+AGG | - | tig0027765:21008-21027 | None:intergenic | 20.0% |
| !!! | TTATTGGACATTTTCATATT+TGG | - | tig0027765:21503-21522 | None:intergenic | 20.0% |
| !! | TAATCAATTAAAAGTTTGGT+TGG | - | tig0027765:23324-23343 | None:intergenic | 20.0% |
| !!! | AGAAAACTAACTTTTAATTG+TGG | + | tig0027765:23656-23675 | Msa1435640:intron | 20.0% |
| !! | TTTTCACTTTCATAGTCAAA+TGG | - | tig0027765:17507-17526 | None:intergenic | 25.0% |
| ! | CTTGATATAATGATGCTTAA+AGG | - | tig0027765:17754-17773 | None:intergenic | 25.0% |
| !! | GACAATATCATTCTTTTAGT+AGG | + | tig0027765:17843-17862 | Msa1435640:intron | 25.0% |
| !! | TTAACTGATTTAACTTTGCA+GGG | - | tig0027765:18056-18075 | None:intergenic | 25.0% |
| !! | TTTAACTGATTTAACTTTGC+AGG | - | tig0027765:18057-18076 | None:intergenic | 25.0% |
| ! | ACAAAAAAAAAATAAGCCAG+GGG | - | tig0027765:18154-18173 | None:intergenic | 25.0% |
| ! | TTTAACTGATTAAACTTTGC+AGG | + | tig0027765:18444-18463 | Msa1435640:intron | 25.0% |
| ! | TTAACTGATTAAACTTTGCA+GGG | + | tig0027765:18445-18464 | Msa1435640:intron | 25.0% |
| !!! | TATAACTTTTTCTGTATTCC+TGG | + | tig0027765:18629-18648 | Msa1435640:intron | 25.0% |
| ! | AAATAGTACAATATTGAACC+AGG | - | tig0027765:18650-18669 | None:intergenic | 25.0% |
| ! | CACATTTACAAAGAATGTAA+TGG | + | tig0027765:18796-18815 | Msa1435640:CDS | 25.0% |
| !!! | ACAGTAAAGTTGATTTTGAT+TGG | + | tig0027765:19031-19050 | Msa1435640:CDS | 25.0% |
| !!! | CAGTAAAGTTGATTTTGATT+GGG | + | tig0027765:19032-19051 | Msa1435640:CDS | 25.0% |
| ! | TTATCCATCAAGTTTAACAT+AGG | - | tig0027765:19130-19149 | None:intergenic | 25.0% |
| ! | TATATTTATTGTGGAAATCC+AGG | + | tig0027765:19191-19210 | Msa1435640:intron | 25.0% |
| ! | TAGAAATAATTGAGACTTTC+GGG | - | tig0027765:19310-19329 | None:intergenic | 25.0% |
| ! | TTATCATTTGTATAGACTTG+GGG | - | tig0027765:19527-19546 | None:intergenic | 25.0% |
| ! | TATAAATAGAGAGTAGTGAT+TGG | - | tig0027765:19563-19582 | None:intergenic | 25.0% |
| ! | AATCACTACTCTCTATTTAT+AGG | + | tig0027765:19562-19581 | Msa1435640:intron | 25.0% |
| ! | TTAAGTTAGTTAGTTAGTTG+TGG | - | tig0027765:19631-19650 | None:intergenic | 25.0% |
| ! | AAAAAAAAGGAAAATGCTAG+CGG | - | tig0027765:19923-19942 | None:intergenic | 25.0% |
| ! | ATGCAACAACATAATTCATA+TGG | + | tig0027765:20117-20136 | Msa1435640:intron | 25.0% |
| ! | TGCAACAACATAATTCATAT+GGG | + | tig0027765:20118-20137 | Msa1435640:intron | 25.0% |
| ! | TGGATAGTATACTTAACTTT+GGG | - | tig0027765:20200-20219 | None:intergenic | 25.0% |
| !!! | CTTTTGACTCTAATTTGTTA+AGG | + | tig0027765:20581-20600 | Msa1435640:intron | 25.0% |
| ! | AAATTTACATGCATTCTTGA+CGG | + | tig0027765:20612-20631 | Msa1435640:intron | 25.0% |
| ! | TTATAGGATAACCAAATTTG+TGG | + | tig0027765:21009-21028 | Msa1435640:intron | 25.0% |
| ! | TATAGGATAACCAAATTTGT+GGG | + | tig0027765:21010-21029 | Msa1435640:intron | 25.0% |
| !! | TTTTGACAAAGTTTCAACAT+TGG | - | tig0027765:21219-21238 | None:intergenic | 25.0% |
| ! | AGATGTATATCAAAGAAAGT+GGG | + | tig0027765:21270-21289 | Msa1435640:intron | 25.0% |
| ! | TTTCAAGAATGCCTTTAAAT+TGG | + | tig0027765:21331-21350 | Msa1435640:intron | 25.0% |
| !!! | CTTTTGACTCTAATTTGATA+AGG | - | tig0027765:21363-21382 | None:intergenic | 25.0% |
| ! | TTAACTATTGCTCATGAAAT+AGG | + | tig0027765:21388-21407 | Msa1435640:intron | 25.0% |
| ! | TAGTATCAACTATAATCGAA+AGG | + | tig0027765:21471-21490 | Msa1435640:intron | 25.0% |
| !! | GTAGATTATTTTCTCATGAA+TGG | + | tig0027765:21657-21676 | Msa1435640:intron | 25.0% |
| ! | TGAATAGTATGCTTAAACTT+GGG | + | tig0027765:21742-21761 | Msa1435640:intron | 25.0% |
| ! | TGCAACAACATAATTCATAT+AGG | - | tig0027765:20118-20137 | None:intergenic | 25.0% |
| ! | TGTTTAACATAATATAGTGG+TGG | - | tig0027765:21863-21882 | None:intergenic | 25.0% |
| ! | AAAAGTAACTACAAGAATGT+TGG | + | tig0027765:21903-21922 | Msa1435640:intron | 25.0% |
| !! | TAAGTTGAATTTCTTAATGG+TGG | - | tig0027765:22174-22193 | None:intergenic | 25.0% |
| !! | GTCTAAGTTGAATTTCTTAA+TGG | - | tig0027765:22177-22196 | None:intergenic | 25.0% |
| ! | AATGATAAAACAACGACAAA+AGG | - | tig0027765:22222-22241 | None:intergenic | 25.0% |
| ! | TATTTACAGATATAGATCAC+TGG | - | tig0027765:22285-22304 | None:intergenic | 25.0% |
| ! | ACAAGATATGTATCTTAGTT+TGG | + | tig0027765:22654-22673 | Msa1435640:CDS | 25.0% |
| ! | ATAAAAGATCAGAAACAGTT+TGG | + | tig0027765:22791-22810 | Msa1435640:CDS | 25.0% |
| ! | TAAAAGATCAGAAACAGTTT+GGG | + | tig0027765:22792-22811 | Msa1435640:CDS | 25.0% |
| ! | TAAAAAAAGGAAGGACAAAA+TGG | + | tig0027765:23110-23129 | Msa1435640:CDS | 25.0% |
| ! | AAAAAAAGGAAGGACAAAAT+GGG | + | tig0027765:23111-23130 | Msa1435640:CDS | 25.0% |
| ! | GAGAATGTTATTATTGATGA+GGG | + | tig0027765:23138-23157 | Msa1435640:CDS | 25.0% |
| !!! | AATACCTTTTAATTGTGGAT+TGG | - | tig0027765:23244-23263 | None:intergenic | 25.0% |
| !!! | CAGAAAATACCTTTTAATTG+TGG | - | tig0027765:23249-23268 | None:intergenic | 25.0% |
| ! | AGCGATAAAAAGTAAAAACA+TGG | - | tig0027765:23376-23395 | None:intergenic | 25.0% |
| !!! | TAACAAATCATGTGTTTTAG+AGG | + | tig0027765:23495-23514 | Msa1435640:intron | 25.0% |
| ! | AAAGACATTTGCATTACTTT+GGG | - | tig0027765:23756-23775 | None:intergenic | 25.0% |
| ! | AAAAGACATTTGCATTACTT+TGG | - | tig0027765:23757-23776 | None:intergenic | 25.0% |
| ! | AGATGGAAATCAAAATTTGA+AGG | + | tig0027765:23898-23917 | Msa1435640:CDS | 25.0% |
| TCTAAAGAATGAAACAAAGG+TGG | + | tig0027765:16818-16837 | Msa1435640:CDS | 30.0% | |
| !! | AAAGTGAGGTTGTTTTCTAT+GGG | - | tig0027765:16924-16943 | None:intergenic | 30.0% |
| GAAAATCAGATTTCAAAGTG+AGG | - | tig0027765:16938-16957 | None:intergenic | 30.0% | |
| CTTCTTCTACTTTGTAGTAA+TGG | - | tig0027765:16965-16984 | None:intergenic | 30.0% | |
| AAAAGAAGAAGAAGAGAAGA+AGG | + | tig0027765:16985-17004 | Msa1435640:CDS | 30.0% | |
| TATAAATTAGGAACTCGAAG+AGG | + | tig0027765:17215-17234 | Msa1435640:intron | 30.0% | |
| TGATTGAGAAAGATACTCAT+AGG | + | tig0027765:17244-17263 | Msa1435640:CDS | 30.0% | |
| ! | ATGTTAAGAGTTGGAACTTT+TGG | + | tig0027765:17309-17328 | Msa1435640:intron | 30.0% |
| ATTTGATCATTCCATTCGTT+GGG | - | tig0027765:17416-17435 | None:intergenic | 30.0% | |
| AACGAATGGAATGATCAAAT+CGG | + | tig0027765:17416-17435 | Msa1435640:CDS | 30.0% | |
| CTTCAGTGTTAAAGTATGTT+TGG | - | tig0027765:17798-17817 | None:intergenic | 30.0% | |
| TGAAGAGTAATGTGTAAACA+TGG | + | tig0027765:17813-17832 | Msa1435640:intron | 30.0% | |
| ! | ACTGCTTACCATGTATTTTT+GGG | - | tig0027765:17876-17895 | None:intergenic | 30.0% |
| ATGAATTACAAGTGAGACAT+AGG | - | tig0027765:17940-17959 | None:intergenic | 30.0% | |
| ! | TAACTGATTTAACTTTGCAG+GGG | - | tig0027765:18055-18074 | None:intergenic | 30.0% |
| !! | ATTGTGTTAATTTGATGACG+TGG | - | tig0027765:18109-18128 | None:intergenic | 30.0% |
| ACGTCATCAAATTAACACAA+TGG | + | tig0027765:18108-18127 | Msa1435640:intron | 30.0% | |
| ATCAAATTAACACAATGGCA+TGG | + | tig0027765:18113-18132 | Msa1435640:intron | 30.0% | |
| TCAAATTAACACAATGGCAT+GGG | + | tig0027765:18114-18133 | Msa1435640:intron | 30.0% | |
| AAGGAAAAAAAATTAGCCCA+GGG | + | tig0027765:18345-18364 | Msa1435640:intron | 30.0% | |
| CAAAATTACCATAATGGCAT+GGG | - | tig0027765:18386-18405 | None:intergenic | 30.0% | |
| TCAAAATTACCATAATGGCA+TGG | - | tig0027765:18387-18406 | None:intergenic | 30.0% | |
| CGTCATCAAAATTACCATAA+TGG | - | tig0027765:18392-18411 | None:intergenic | 30.0% | |
| !!! | TTATGGTAATTTTGATGACG+TGG | + | tig0027765:18392-18411 | Msa1435640:intron | 30.0% |
| TAACTGATTAAACTTTGCAG+GGG | + | tig0027765:18446-18465 | Msa1435640:intron | 30.0% | |
| TATGCTGTGGAAGAAAATAA+AGG | - | tig0027765:18550-18569 | None:intergenic | 30.0% | |
| AAGTTACGGGATTATAAAAG+AGG | - | tig0027765:18708-18727 | None:intergenic | 30.0% | |
| CAGATAAGGAATTAAGTTAC+GGG | - | tig0027765:18721-18740 | None:intergenic | 30.0% | |
| GCAGATAAGGAATTAAGTTA+CGG | - | tig0027765:18722-18741 | None:intergenic | 30.0% | |
| TATCTAGTCCACTTGATTTA+AGG | + | tig0027765:18830-18849 | Msa1435640:CDS | 30.0% | |
| GGAATAAACCTTAAATCAAG+TGG | - | tig0027765:18841-18860 | None:intergenic | 30.0% | |
| TAAGGTTTATTCCTGACATT+TGG | + | tig0027765:18848-18867 | Msa1435640:CDS | 30.0% | |
| AAGGTTTATTCCTGACATTT+GGG | + | tig0027765:18849-18868 | Msa1435640:CDS | 30.0% | |
| ! | AACTACGTAGTCAAAGATTT+TGG | + | tig0027765:18991-19010 | Msa1435640:CDS | 30.0% |
| !!! | TAAAGTTGATTTTGATTGGG+AGG | + | tig0027765:19035-19054 | Msa1435640:CDS | 30.0% |
| AAGAAAATTTACTGATGAGC+AGG | + | tig0027765:19089-19108 | Msa1435640:CDS | 30.0% | |
| ATCAAGTTTAACATAGGCTA+GGG | - | tig0027765:19124-19143 | None:intergenic | 30.0% | |
| !! | TCTTTGTTTCTGAAGACAAT+AGG | + | tig0027765:19236-19255 | Msa1435640:intron | 30.0% |
| GAAAGCTGGTAAAACTATAT+TGG | + | tig0027765:19440-19459 | Msa1435640:intron | 30.0% | |
| AGTTAGTTGTGGCTAAAATA+GGG | - | tig0027765:19620-19639 | None:intergenic | 30.0% | |
| TAGTTAGTTGTGGCTAAAAT+AGG | - | tig0027765:19621-19640 | None:intergenic | 30.0% | |
| CTGATAGAGAGAAAATGAAA+AGG | - | tig0027765:19677-19696 | None:intergenic | 30.0% | |
| TTCTCCTTAATAGCTATTCA+TGG | + | tig0027765:19732-19751 | Msa1435640:intron | 30.0% | |
| TCTCCTTAATAGCTATTCAT+GGG | + | tig0027765:19733-19752 | Msa1435640:intron | 30.0% | |
| AAACCCATGAATAGCTATTA+AGG | - | tig0027765:19739-19758 | None:intergenic | 30.0% | |
| AAAAAAAGGAAAATGCTAGC+GGG | - | tig0027765:19922-19941 | None:intergenic | 30.0% | |
| ACCAAAATTATTGTATGGGA+GGG | - | tig0027765:20001-20020 | None:intergenic | 30.0% | |
| TACCAAAATTATTGTATGGG+AGG | - | tig0027765:20002-20021 | None:intergenic | 30.0% | |
| AGGATTAGACATATCAAATG+TGG | + | tig0027765:20055-20074 | Msa1435640:intron | 30.0% | |
| TATCAAATGTGGACCTTATT+AGG | + | tig0027765:20066-20085 | Msa1435640:intron | 30.0% | |
| !! | TTAGGTTGAACATAATTTGG+TGG | + | tig0027765:20084-20103 | Msa1435640:intron | 30.0% |
| TAAAATCTTCTGCAAGTTGT+GGG | - | tig0027765:20176-20195 | None:intergenic | 30.0% | |
| ATAAAATCTTCTGCAAGTTG+TGG | - | tig0027765:20177-20196 | None:intergenic | 30.0% | |
| GTGGATAGTATACTTAACTT+TGG | - | tig0027765:20201-20220 | None:intergenic | 30.0% | |
| !! | TGTTAATTGCTTTTCCATTG+AGG | + | tig0027765:20247-20266 | Msa1435640:intron | 30.0% |
| ATTGGACCCTAATTCATATT+TGG | + | tig0027765:20439-20458 | Msa1435640:intron | 30.0% | |
| !! | TAGTACTTGTTATTCTGCAA+TGG | - | tig0027765:20491-20510 | Msa1435650:intron | 30.0% |
| ATTGCAGAATAACAAGTACT+AGG | + | tig0027765:20490-20509 | Msa1435640:intron | 30.0% | |
| TTAACTATTACTCGTGAGAT+AGG | - | tig0027765:20556-20575 | Msa1435650:intron | 30.0% | |
| AGAATGCATGTAAATTTGGA+TGG | - | tig0027765:20609-20628 | Msa1435650:intron | 30.0% | |
| GTCAAGAATGCATGTAAATT+TGG | - | tig0027765:20613-20632 | Msa1435650:intron | 30.0% | |
| CAACTATTATAGAATCACCA+AGG | - | tig0027765:20851-20870 | Msa1435650:CDS | 30.0% | |
| ATAGGATAACCAAATTTGTG+GGG | + | tig0027765:21011-21030 | Msa1435640:intron | 30.0% | |
| !! | TGATTTGGTAGTCAGATTAA+AGG | - | tig0027765:21051-21070 | None:intergenic | 30.0% |
| ! | AAAAATCGACAGAGTTGATT+TGG | - | tig0027765:21066-21085 | None:intergenic | 30.0% |
| !! | TGATTTGGTAGTCAGATTAA+AGG | - | tig0027765:21051-21070 | None:intergenic | 30.0% |
| ! | AAAAATCGACAGAGTTGATT+TGG | - | tig0027765:21066-21085 | None:intergenic | 30.0% |
| CAGATGTATATCAAAGAAAG+TGG | + | tig0027765:21269-21288 | Msa1435640:intron | 30.0% | |
| AAGAATGCCTTTAAATTGGA+CGG | + | tig0027765:21335-21354 | Msa1435640:intron | 30.0% | |
| ATTGCAGAATAGTAAGAACT+AGG | - | tig0027765:21452-21471 | None:intergenic | 30.0% | |
| ATGGAAAAACAATTGACACA+AGG | + | tig0027765:21676-21695 | Msa1435640:intron | 30.0% | |
| GTGAATAGTATGCTTAAACT+TGG | + | tig0027765:21741-21760 | Msa1435640:intron | 30.0% | |
| GAATAGTATGCTTAAACTTG+GGG | + | tig0027765:21743-21762 | Msa1435640:intron | 30.0% | |
| ! | TTTTTGTGAACCATGACTAA+GGG | - | tig0027765:22016-22035 | None:intergenic | 30.0% |
| !!! | TTTTTTGTGAACCATGACTA+AGG | - | tig0027765:22017-22036 | None:intergenic | 30.0% |
| AAAAAAGCTTGTGCTTTACT+AGG | + | tig0027765:22031-22050 | Msa1435640:intron | 30.0% | |
| AAAAAGCTTGTGCTTTACTA+GGG | + | tig0027765:22032-22051 | Msa1435640:intron | 30.0% | |
| TTAGGAAAAGATTTGTAAGC+TGG | - | tig0027765:22138-22157 | None:intergenic | 30.0% | |
| ! | ATTTCTTAATGGTGGAACAT+TGG | - | tig0027765:22166-22185 | None:intergenic | 30.0% |
| ! | AAACAACGACAAAAGGTATA+TGG | - | tig0027765:22215-22234 | None:intergenic | 30.0% |
| ! | AATGCAATTTCTTTTTGCGT+TGG | + | tig0027765:22243-22262 | Msa1435640:intron | 30.0% |
| TTATATGTATGTGCATGACA+TGG | - | tig0027765:22309-22328 | None:intergenic | 30.0% | |
| ATTTGAATGACAGAAGAAAC+CGG | + | tig0027765:22432-22451 | Msa1435640:intron | 30.0% | |
| ! | TATCTTAGTTTGGTCTATTC+AGG | + | tig0027765:22664-22683 | Msa1435640:CDS | 30.0% |
| ACATAATAACCTCCAACATA+TGG | + | tig0027765:22987-23006 | Msa1435640:CDS | 30.0% | |
| AAAAAAGGAAGGACAAAATG+GGG | + | tig0027765:23112-23131 | Msa1435640:CDS | 30.0% | |
| GGAGAATGTTATTATTGATG+AGG | + | tig0027765:23137-23156 | Msa1435640:CDS | 30.0% | |
| TCATCACTATATGTACTGTT+TGG | - | tig0027765:23171-23190 | None:intergenic | 30.0% | |
| ! | TTGATGTTTTCATCAATGGT+GGG | - | tig0027765:23451-23470 | None:intergenic | 30.0% |
| ! | ATTGATGTTTTCATCAATGG+TGG | - | tig0027765:23452-23471 | None:intergenic | 30.0% |
| ACCATTGATGAAAACATCAA+TGG | + | tig0027765:23451-23470 | Msa1435640:intron | 30.0% | |
| ! | ACCATTGATGTTTTCATCAA+TGG | - | tig0027765:23455-23474 | None:intergenic | 30.0% |
| ! | CTTAAAAGGTGACTTTGAAA+TGG | + | tig0027765:23573-23592 | Msa1435640:intron | 30.0% |
| ! | GTAATGCAAATGTCTTTTGA+TGG | + | tig0027765:23759-23778 | Msa1435640:CDS | 30.0% |
| ! | TAACTATCTATCGTGTTGAT+TGG | - | tig0027765:23958-23977 | None:intergenic | 30.0% |
| ! | ATTTAGCATGGTGCTAAATA+AGG | - | tig0027765:24044-24063 | None:intergenic | 30.0% |
| !!! | TTAGCATCCATTTTTTTCAG+TGG | - | tig0027765:24083-24102 | None:intergenic | 30.0% |
| AAGAAAAACAACGCAAGAAG+AGG | + | tig0027765:16733-16752 | Msa1435640:CDS | 35.0% | |
| !! | GGCTCTAAAGAATGAAACAA+AGG | + | tig0027765:16815-16834 | Msa1435640:CDS | 35.0% |
| !! | CAAAGTGAGGTTGTTTTCTA+TGG | - | tig0027765:16925-16944 | None:intergenic | 35.0% |
| AAGAAGAGAAGAAGGAAACA+GGG | + | tig0027765:16993-17012 | Msa1435640:CDS | 35.0% | |
| AAGGTGTGTATGTTAAGAGT+TGG | + | tig0027765:17300-17319 | Msa1435640:intron | 35.0% | |
| AATTCATTTGTCCCAACGAA+TGG | + | tig0027765:17402-17421 | Msa1435640:CDS | 35.0% | |
| GATTTGATCATTCCATTCGT+TGG | - | tig0027765:17417-17436 | None:intergenic | 35.0% | |
| AGTCAAATGGAACAAATCCA+CGG | - | tig0027765:17494-17513 | None:intergenic | 35.0% | |
| GATACACTCCCAAAAATACA+TGG | + | tig0027765:17865-17884 | Msa1435640:intron | 35.0% | |
| ! | CACTGCTTACCATGTATTTT+TGG | - | tig0027765:17877-17896 | None:intergenic | 35.0% |
| AAATACATGGTAAGCAGTGA+AGG | + | tig0027765:17878-17897 | Msa1435640:intron | 35.0% | |
| ! | AAAAAGGATTAGCGATTGCA+GGG | - | tig0027765:18475-18494 | None:intergenic | 35.0% |
| ! | AAAAAAGGATTAGCGATTGC+AGG | - | tig0027765:18474-18493 | None:intergenic | 35.0% |
| GAAGGAAAAAAAATTAGCCC+AGG | + | tig0027765:18344-18363 | Msa1435640:intron | 35.0% | |
| AGGAAAAAAAATTAGCCCAG+GGG | + | tig0027765:18346-18365 | Msa1435640:intron | 35.0% | |
| TTTGCAGGGGCAAAAAAAAA+AGG | + | tig0027765:18459-18478 | Msa1435640:intron | 35.0% | |
| ! | AAAAAAGGATTAGCGATTGC+AGG | + | tig0027765:18474-18493 | Msa1435640:intron | 35.0% |
| ! | AAAAAGGATTAGCGATTGCA+GGG | + | tig0027765:18475-18494 | Msa1435640:intron | 35.0% |
| CAGATAACAAATCTATGCTG+TGG | - | tig0027765:18563-18582 | None:intergenic | 35.0% | |
| TATAAAAGAGGAAAGCAGAG+AGG | - | tig0027765:18696-18715 | None:intergenic | 35.0% | |
| TGTTTGAATTCCCAAATGTC+AGG | - | tig0027765:18862-18881 | None:intergenic | 35.0% | |
| TGACATTTGGGAATTCAAAC+AGG | + | tig0027765:18861-18880 | Msa1435640:CDS | 35.0% | |
| TTTAACTCCTTTCAATGCTC+AGG | + | tig0027765:18960-18979 | Msa1435640:intron | 35.0% | |
| CATCAAGTTTAACATAGGCT+AGG | - | tig0027765:19125-19144 | None:intergenic | 35.0% | |
| CTAGCCTATGTTAAACTTGA+TGG | + | tig0027765:19123-19142 | Msa1435640:intron | 35.0% | |
| GAAACAAAGACCTGATATCA+TGG | - | tig0027765:19226-19245 | None:intergenic | 35.0% | |
| GCTTTCTTATGTCTAGTCAA+TGG | - | tig0027765:19426-19445 | None:intergenic | 35.0% | |
| TTGACTAGACATAAGAAAGC+TGG | + | tig0027765:19426-19445 | Msa1435640:intron | 35.0% | |
| TTGGAATGAATAAACTCCCA+CGG | + | tig0027765:19459-19478 | Msa1435640:intron | 35.0% | |
| ! | TTTTCCTTACTACAAGCTTG+AGG | - | tig0027765:19797-19816 | None:intergenic | 35.0% |
| GTAGTAAGGAAAATGCTACT+CGG | + | tig0027765:19804-19823 | Msa1435640:intron | 35.0% | |
| ! | AGGGGAAATGTTAGTTTACA+TGG | - | tig0027765:19897-19916 | None:intergenic | 35.0% |
| AAAAAAGGAAAATGCTAGCG+GGG | - | tig0027765:19921-19940 | None:intergenic | 35.0% | |
| CAAAATTATTGTATGGGAGG+GGG | - | tig0027765:19999-20018 | None:intergenic | 35.0% | |
| CCAAAATTATTGTATGGGAG+GGG | - | tig0027765:20000-20019 | None:intergenic | 35.0% | |
| !! | AACACAGACTAAGCTTTGAA+TGG | - | tig0027765:20231-20250 | None:intergenic | 35.0% |
| !! | TAATTGCTTTTCCATTGAGG+AGG | + | tig0027765:20250-20269 | Msa1435640:intron | 35.0% |
| GCTTCGATTGACACAATTAT+TGG | + | tig0027765:20421-20440 | Msa1435640:intron | 35.0% | |
| ! | TGTTACTTATCACGTTTCTG+AGG | + | tig0027765:20515-20534 | Msa1435640:intron | 35.0% |
| GTTACTTATCACGTTTCTGA+GGG | + | tig0027765:20516-20535 | Msa1435640:intron | 35.0% | |
| TGATGAATTAGCAAGTGTGA+TGG | - | tig0027765:20650-20669 | Msa1435650:CDS | 35.0% | |
| TGCATATTCTTCGACAACAT+AGG | + | tig0027765:20683-20702 | Msa1435640:intron | 35.0% | |
| GGTAGTTGTTCAATATCTTC+TGG | + | tig0027765:20704-20723 | Msa1435640:intron | 35.0% | |
| AGTTGTTCAATATCTTCTGG+CGG | + | tig0027765:20707-20726 | Msa1435640:intron | 35.0% | |
| !!! | CGATTTTATACTTGGGTTGA+AGG | + | tig0027765:20803-20822 | Msa1435640:intron | 35.0% |
| TTATAGAATCACCAAGGTTG+TGG | - | tig0027765:20845-20864 | Msa1435650:CDS | 35.0% | |
| TTGGATTCTATAGCGGTTTA+TGG | - | tig0027765:20932-20951 | None:intergenic | 35.0% | |
| ! | ATCGGGTTATCACCTTTTAT+AGG | + | tig0027765:20993-21012 | Msa1435640:intron | 35.0% |
| ! | TTGGTAGTCAGATTAAAGGT+TGG | - | tig0027765:21047-21066 | None:intergenic | 35.0% |
| TAAGGAACCGTCCAATTTAA+AGG | - | tig0027765:21345-21364 | None:intergenic | 35.0% | |
| CTGTAACATCACATTTCCAA+GGG | - | tig0027765:21428-21447 | None:intergenic | 35.0% | |
| TCTGTAACATCACATTTCCA+AGG | - | tig0027765:21429-21448 | None:intergenic | 35.0% | |
| AAGCATACTATTCACACAAG+TGG | - | tig0027765:21736-21755 | None:intergenic | 35.0% | |
| GGGTAAATCTTCTTCAAGAT+GGG | + | tig0027765:21763-21782 | Msa1435640:intron | 35.0% | |
| GGTAAATCTTCTTCAAGATG+GGG | + | tig0027765:21764-21783 | Msa1435640:intron | 35.0% | |
| CCTTGAAAGATTAAGGAAAG+AGG | - | tig0027765:21989-22008 | None:intergenic | 35.0% | |
| CCTCTTTCCTTAATCTTTCA+AGG | + | tig0027765:21986-22005 | Msa1435640:intron | 35.0% | |
| AAAAGCTTGTGCTTTACTAG+GGG | + | tig0027765:22033-22052 | Msa1435640:intron | 35.0% | |
| CCATTAAATTGGAGAAACGA+GGG | - | tig0027765:22081-22100 | None:intergenic | 35.0% | |
| TCCATTAAATTGGAGAAACG+AGG | - | tig0027765:22082-22101 | None:intergenic | 35.0% | |
| AAAATTAGGCTCAATATCCC+CGG | + | tig0027765:22110-22129 | Msa1435640:intron | 35.0% | |
| ! | AAAGATTTGTAAGCTGGTTC+CGG | - | tig0027765:22132-22151 | None:intergenic | 35.0% |
| TTACAGATATAGATCACTGG+AGG | - | tig0027765:22282-22301 | None:intergenic | 35.0% | |
| TTTGAATGACAGAAGAAACC+GGG | + | tig0027765:22433-22452 | Msa1435640:intron | 35.0% | |
| ATGAGTATATGAATGCTTCC+CGG | - | tig0027765:22454-22473 | None:intergenic | 35.0% | |
| AGCAAGCTATTAAAGCAGAA+GGG | - | tig0027765:22542-22561 | None:intergenic | 35.0% | |
| GTTGGAATGGAAAGAATACT+TGG | + | tig0027765:22564-22583 | Msa1435640:CDS | 35.0% | |
| TTAGACATTCCAATCCTGAA+TGG | - | tig0027765:22747-22766 | None:intergenic | 35.0% | |
| !! | AAACAGTTTGGGAAGCATTT+CGG | + | tig0027765:22803-22822 | Msa1435640:CDS | 35.0% |
| AGCAGATGAATTCTTCATTG+AGG | + | tig0027765:22912-22931 | Msa1435640:CDS | 35.0% | |
| !!! | CCTTTTAATTGTGGATTGGT+GGG | - | tig0027765:23240-23259 | None:intergenic | 35.0% |
| !!! | ACCTTTTAATTGTGGATTGG+TGG | - | tig0027765:23241-23260 | None:intergenic | 35.0% |
| TTTATCGCTTCACACCTATT+TGG | + | tig0027765:23387-23406 | Msa1435640:intron | 35.0% | |
| ATAGAAAAGCCGAACCAAAT+AGG | - | tig0027765:23404-23423 | None:intergenic | 35.0% | |
| GACTCAAATCCATTCATAAC+TGG | + | tig0027765:23517-23536 | Msa1435640:intron | 35.0% | |
| ATGCAGAAGGATAAGAAAGA+AGG | + | tig0027765:23786-23805 | Msa1435640:CDS | 35.0% | |
| GAAGGATAAGAAAGAAGGAT+TGG | + | tig0027765:23791-23810 | Msa1435640:CDS | 35.0% | |
| ! | TTGAAGGTGTAGAGAAAAAG+AGG | + | tig0027765:23914-23933 | Msa1435640:intron | 35.0% |
| ATGAGTGTGCATATTTAGCA+TGG | - | tig0027765:24056-24075 | None:intergenic | 35.0% | |
| CATTGCACCACTGAAAAAAA+TGG | + | tig0027765:24073-24092 | Msa1435640:three_prime_UTR | 35.0% | |
| ! | ATCAGTGATCCTCGTTTTGT+AGG | + | tig0027765:16765-16784 | Msa1435640:CDS | 40.0% |
| GAAGAAGAGAAGAAGGAAAC+AGG | + | tig0027765:16992-17011 | Msa1435640:CDS | 40.0% | |
| AAGAAGGAAACAGGGATTGA+TGG | + | tig0027765:17001-17020 | Msa1435640:CDS | 40.0% | |
| TGAGAAAGATACTCATAGGC+TGG | + | tig0027765:17248-17267 | Msa1435640:CDS | 40.0% | |
| GAACACTGCATACAAGTCAA+CGG | - | tig0027765:17382-17401 | None:intergenic | 40.0% | |
| CTGTCTATCCAACTGAGTTT+GGG | + | tig0027765:17442-17461 | Msa1435640:CDS | 40.0% | |
| ACTTTAGCTGTATGCCATTC+AGG | - | tig0027765:17629-17648 | None:intergenic | 40.0% | |
| TGTTATTCGTCCCTGCAAAT+AGG | + | tig0027765:17983-18002 | Msa1435640:intron | 40.0% | |
| GTTATTCGTCCCTGCAAATA+GGG | + | tig0027765:17984-18003 | Msa1435640:intron | 40.0% | |
| TTATTCGTCCCTGCAAATAG+GGG | + | tig0027765:17985-18004 | Msa1435640:intron | 40.0% | |
| TTAAACGACCCCTATTTGCA+GGG | - | tig0027765:17996-18015 | None:intergenic | 40.0% | |
| TTTAAACGACCCCTATTTGC+AGG | - | tig0027765:17997-18016 | None:intergenic | 40.0% | |
| CTTTGCAGGGGCAAAAAAAA+AGG | - | tig0027765:18458-18477 | None:intergenic | 40.0% | |
| ! | GCAGTCATTAACTTGGTCAA+TGG | - | tig0027765:18414-18433 | None:intergenic | 40.0% |
| GAATTGACGAAAATACCCCT+GGG | - | tig0027765:18136-18155 | None:intergenic | 40.0% | |
| ! | GCAGTCATTAACTTGGTCAA+GGG | + | tig0027765:18414-18433 | Msa1435640:intron | 40.0% |
| TTATTCGTCCCTGCAAATAG+GGG | - | tig0027765:17985-18004 | None:intergenic | 40.0% | |
| GTTATTCGTCCCTGCAAATA+GGG | - | tig0027765:17984-18003 | None:intergenic | 40.0% | |
| TGTTATTCGTCCCTGCAAAT+AGG | - | tig0027765:17983-18002 | None:intergenic | 40.0% | |
| TTTGTAAATGTGAGCTGCTG+TGG | - | tig0027765:18788-18807 | None:intergenic | 40.0% | |
| ATGATGATCCCTTTCGCAAA+AGG | + | tig0027765:19058-19077 | Msa1435640:CDS | 40.0% | |
| ! | CTCAAGATCCTTTTGCGAAA+GGG | - | tig0027765:19069-19088 | None:intergenic | 40.0% |
| ! | TCTCAAGATCCTTTTGCGAA+AGG | - | tig0027765:19070-19089 | None:intergenic | 40.0% |
| CAATAGGAAATGCAGAAGCA+AGG | + | tig0027765:19252-19271 | Msa1435640:intron | 40.0% | |
| TGCAGAAGCAAGGAAAAACA+TGG | + | tig0027765:19262-19281 | Msa1435640:intron | 40.0% | |
| AAGCAAGGAAAAACATGGTC+TGG | + | tig0027765:19267-19286 | Msa1435640:intron | 40.0% | |
| AGCAAGGAAAAACATGGTCT+GGG | + | tig0027765:19268-19287 | Msa1435640:intron | 40.0% | |
| AACTGAATCACACACCAACT+AGG | + | tig0027765:19378-19397 | Msa1435640:intron | 40.0% | |
| AACTAGTATCAGAGCCTAGT+TGG | - | tig0027765:19395-19414 | None:intergenic | 40.0% | |
| ! | TAGGCTCTGATACTAGTTGA+TGG | + | tig0027765:19397-19416 | Msa1435640:intron | 40.0% |
| ! | AGGCTCTGATACTAGTTGAT+GGG | + | tig0027765:19398-19417 | Msa1435640:intron | 40.0% |
| AATGAATAAACTCCCACGGT+AGG | + | tig0027765:19463-19482 | Msa1435640:intron | 40.0% | |
| ! | TGAGGACAAAGTGTCTCATT+AGG | - | tig0027765:19779-19798 | None:intergenic | 40.0% |
| TTGTCCTCAAGCTTGTAGTA+AGG | + | tig0027765:19790-19809 | Msa1435640:intron | 40.0% | |
| GGACATCTAAGAGTTTGAGT+AGG | + | tig0027765:19858-19877 | Msa1435640:intron | 40.0% | |
| TAAGAGTTTGAGTAGGTCCA+GGG | + | tig0027765:19865-19884 | Msa1435640:intron | 40.0% | |
| AGTTTACATGGATAGAACCC+TGG | - | tig0027765:19885-19904 | None:intergenic | 40.0% | |
| ! | CCCCTCCCATACAATAATTT+TGG | + | tig0027765:19997-20016 | Msa1435640:intron | 40.0% |
| ! | GGTTGAACATAATTTGGTGG+TGG | + | tig0027765:20087-20106 | Msa1435640:intron | 40.0% |
| !! | AGCTTTGAATGGATCTTGTG+TGG | - | tig0027765:20220-20239 | None:intergenic | 40.0% |
| CAAGTAGATTTCCTCCTCAA+TGG | - | tig0027765:20264-20283 | None:intergenic | 40.0% | |
| CATTGAGGAGGAAATCTACT+TGG | + | tig0027765:20262-20281 | Msa1435640:intron | 40.0% | |
| GAGGAAATCTACTTGGTTGA+GGG | + | tig0027765:20269-20288 | Msa1435640:intron | 40.0% | |
| ACAACAGAAGCTCCATATTC+AGG | + | tig0027765:20394-20413 | Msa1435640:intron | 40.0% | |
| TTCTGGCGGAGTTTCAATAT+TGG | + | tig0027765:20721-20740 | Msa1435640:intron | 40.0% | |
| AAGTGCATAATCAATCCCTC+AGG | + | tig0027765:20745-20764 | Msa1435640:intron | 40.0% | |
| ATAATCAATCCCTCAGGAGA+CGG | + | tig0027765:20751-20770 | Msa1435640:intron | 40.0% | |
| AGGGAAATGTAAATCCGACT+GGG | - | tig0027765:20885-20904 | Msa1435650:CDS | 40.0% | |
| AAGGGAAATGTAAATCCGAC+TGG | - | tig0027765:20886-20905 | Msa1435650:CDS | 40.0% | |
| TTTATGGCACTGCATAGAGA+AGG | - | tig0027765:20916-20935 | None:intergenic | 40.0% | |
| !! | CGAAGTGTTGGATTCTATAG+CGG | - | tig0027765:20939-20958 | None:intergenic | 40.0% |
| CGCTATAGAATCCAACACTT+CGG | + | tig0027765:20937-20956 | Msa1435640:intron | 40.0% | |
| GCTATAGAATCCAACACTTC+GGG | + | tig0027765:20938-20957 | Msa1435640:intron | 40.0% | |
| TGATAACCCGATTCCACTTT+GGG | - | tig0027765:20985-21004 | None:intergenic | 40.0% | |
| AAAATCAATCCCTCGAGAGA+GGG | - | tig0027765:21103-21122 | None:intergenic | 40.0% | |
| AAAATCAATCCCTCGAGAGA+GGG | - | tig0027765:21103-21122 | None:intergenic | 40.0% | |
| AAGTGGGATGATGAACTATC+AGG | + | tig0027765:21286-21305 | Msa1435640:intron | 40.0% | |
| GGGGTAAATCTTCTTCAAGA+TGG | + | tig0027765:21762-21781 | Msa1435640:intron | 40.0% | |
| TTATGTTGTTGCATCCATGC+TGG | + | tig0027765:21829-21848 | Msa1435640:intron | 40.0% | |
| AGAATACAAGAAGCTGCTAG+TGG | - | tig0027765:21958-21977 | None:intergenic | 40.0% | |
| CCCTCGTTTCTCCAATTTAA+TGG | + | tig0027765:22078-22097 | Msa1435640:intron | 40.0% | |
| ! | AAGATTTGTAAGCTGGTTCC+GGG | - | tig0027765:22131-22150 | None:intergenic | 40.0% |
| ! | CAAAAGGTATATGGCACACA+AGG | - | tig0027765:22206-22225 | None:intergenic | 40.0% |
| GAGCAAGCTATTAAAGCAGA+AGG | - | tig0027765:22543-22562 | None:intergenic | 40.0% | |
| !! | GCTTTAATAGCTTGCTCAGT+TGG | + | tig0027765:22546-22565 | Msa1435640:intron | 40.0% |
| !! | AATAGCTTGCTCAGTTGGAA+TGG | + | tig0027765:22551-22570 | Msa1435640:intron | 40.0% |
| TAACAGTGAGACTGATGATC+AGG | + | tig0027765:22612-22631 | Msa1435640:CDS | 40.0% | |
| !! | TGATGATCAGGTTGATGAGA+AGG | + | tig0027765:22624-22643 | Msa1435640:CDS | 40.0% |
| AGTTTGGTCTATTCAGGCAA+TGG | + | tig0027765:22670-22689 | Msa1435640:CDS | 40.0% | |
| ACATTCCAATCCTGAATGGA+AGG | - | tig0027765:22743-22762 | None:intergenic | 40.0% | |
| TTCTTCCTCTTCTTAGCACA+AGG | - | tig0027765:22940-22959 | None:intergenic | 40.0% | |
| ! | AGAAGAGGAAGAAAGCACAA+AGG | + | tig0027765:22947-22966 | Msa1435640:CDS | 40.0% |
| TAACCTCCAACATATGGACA+TGG | + | tig0027765:22993-23012 | Msa1435640:CDS | 40.0% | |
| ! | TATTGCTTGCTGATGACAAG+AGG | + | tig0027765:23052-23071 | Msa1435640:CDS | 40.0% |
| GATGACAAGAGGATAGAAAC+TGG | + | tig0027765:23063-23082 | Msa1435640:CDS | 40.0% | |
| ! | AGGATAGAAACTGGTCTCAA+GGG | + | tig0027765:23072-23091 | Msa1435640:CDS | 40.0% |
| ! | AAAAGAAGCGCAACAAAACG+TGG | - | tig0027765:23195-23214 | None:intergenic | 40.0% |
| CCCACCAATCCACAATTAAA+AGG | + | tig0027765:23237-23256 | Msa1435640:CDS | 40.0% | |
| !! | ATGTTTTCATCAATGGTGGG+TGG | - | tig0027765:23448-23467 | None:intergenic | 40.0% |
| CCATAACAGCCAGTTATGAA+TGG | - | tig0027765:23529-23548 | None:intergenic | 40.0% | |
| CCATTCATAACTGGCTGTTA+TGG | + | tig0027765:23526-23545 | Msa1435640:intron | 40.0% | |
| !! | TTTTGATGGCATGATGCAGA+AGG | + | tig0027765:23773-23792 | Msa1435640:CDS | 40.0% |
| CAAAGCAGATCCAATCAAGA+TGG | + | tig0027765:23863-23882 | Msa1435640:CDS | 40.0% | |
| !! | ATCTATCGTGTTGATTGGAG+TGG | - | tig0027765:23953-23972 | None:intergenic | 40.0% |
| ! | AGCATGGTGCTAAATAAGGA+AGG | - | tig0027765:24040-24059 | None:intergenic | 40.0% |
| TTAGAGCCTCTCGAAAACGA+GGG | - | tig0027765:16803-16822 | None:intergenic | 45.0% | |
| ! | TTTAGAGCCTCTCGAAAACG+AGG | - | tig0027765:16804-16823 | None:intergenic | 45.0% |
| AAGGAAACAGGGATTGATGG+AGG | + | tig0027765:17004-17023 | Msa1435640:CDS | 45.0% | |
| TACTGACACGCTTGATATGC+AGG | + | tig0027765:17100-17119 | Msa1435640:CDS | 45.0% | |
| TCAAGATGTCTAGTCTCGTC+TGG | + | tig0027765:17141-17160 | Msa1435640:intron | 45.0% | |
| !! | CATGGACTGGAACTATGTGA+AGG | + | tig0027765:17281-17300 | Msa1435640:CDS | 45.0% |
| GCTGTCTATCCAACTGAGTT+TGG | + | tig0027765:17441-17460 | Msa1435640:CDS | 45.0% | |
| TGGGCTTCAACGTATGAAAG+AGG | + | tig0027765:17461-17480 | Msa1435640:CDS | 45.0% | |
| ATGAAAGAGGAGAATAGCCG+TGG | + | tig0027765:17474-17493 | Msa1435640:CDS | 45.0% | |
| TGACGTGGCAGTCATTAACT+TGG | - | tig0027765:18407-18426 | None:intergenic | 45.0% | |
| GGAATTGACGAAAATACCCC+TGG | + | tig0027765:18135-18154 | Msa1435640:intron | 45.0% | |
| GGAATTGACGAAAATACCCC+TGG | - | tig0027765:18135-18154 | None:intergenic | 45.0% | |
| CGTCAATTCCCATGCCATTA+TGG | + | tig0027765:18375-18394 | Msa1435640:intron | 45.0% | |
| TGACGTGGCAGTCATTAACT+TGG | + | tig0027765:18407-18426 | Msa1435640:intron | 45.0% | |
| ! | GGCAGTCATTAACTTGGTCA+AGG | + | tig0027765:18413-18432 | Msa1435640:intron | 45.0% |
| TTTAAGCGACCCCTATTTGC+AGG | + | tig0027765:18505-18524 | Msa1435640:intron | 45.0% | |
| TTAAGCGACCCCTATTTGCA+GGG | + | tig0027765:18506-18525 | Msa1435640:intron | 45.0% | |
| ! | AAAGCAGAGAGGTGCACATA+TGG | - | tig0027765:18685-18704 | None:intergenic | 45.0% |
| AATTCCTTATCTGCCTCTGC+AGG | + | tig0027765:18728-18747 | Msa1435640:intron | 45.0% | |
| GGAATTCAAACAGGAGCCTA+GGG | + | tig0027765:18870-18889 | Msa1435640:CDS | 45.0% | |
| ACCTTTGTCACAACATCCCT+AGG | - | tig0027765:18889-18908 | None:intergenic | 45.0% | |
| TCTTTGACTACGTAGTTCGC+AGG | - | tig0027765:18988-19007 | None:intergenic | 45.0% | |
| !! | TTACTGTGCAGAAGTACTCG+AGG | - | tig0027765:19018-19037 | None:intergenic | 45.0% |
| ! | ATATCATGGTGATGCAAGCC+TGG | - | tig0027765:19212-19231 | None:intergenic | 45.0% |
| GCTTGCATCACCATGATATC+AGG | + | tig0027765:19213-19232 | Msa1435640:intron | 45.0% | |
| TGTGTGATTCAGTTGCTAGG+GGG | - | tig0027765:19372-19391 | None:intergenic | 45.0% | |
| GTGTGTGATTCAGTTGCTAG+GGG | - | tig0027765:19373-19392 | None:intergenic | 45.0% | |
| GGTGTGTGATTCAGTTGCTA+GGG | - | tig0027765:19374-19393 | None:intergenic | 45.0% | |
| TGGTGTGTGATTCAGTTGCT+AGG | - | tig0027765:19375-19394 | None:intergenic | 45.0% | |
| GGTAGGTATTCGAGAGACTT+TGG | + | tig0027765:19480-19499 | Msa1435640:intron | 45.0% | |
| GGACTCTCCTAATGCCAAAA+AGG | + | tig0027765:19501-19520 | Msa1435640:intron | 45.0% | |
| ! | GTATAGACTTGGGGCCTTTT+TGG | - | tig0027765:19518-19537 | None:intergenic | 45.0% |
| ! | GAAAGATGTGACGTGATGGA+TGG | - | tig0027765:19715-19734 | None:intergenic | 45.0% |
| AGGAGAAAGATGTGACGTGA+TGG | - | tig0027765:19719-19738 | None:intergenic | 45.0% | |
| CTAAGAGTTTGAGTAGGTCC+AGG | + | tig0027765:19864-19883 | Msa1435640:intron | 45.0% | |
| !! | CATAATTTGGTGGTGGATGC+TGG | + | tig0027765:20094-20113 | Msa1435640:intron | 45.0% |
| CAAGTTGTGGGTCTGTTCAA+TGG | - | tig0027765:20164-20183 | None:intergenic | 45.0% | |
| GGAGGAAATCTACTTGGTTG+AGG | + | tig0027765:20268-20287 | Msa1435640:intron | 45.0% | |
| AGAAGCTCCATATTCAGGCT+TGG | + | tig0027765:20399-20418 | Msa1435640:intron | 45.0% | |
| ATCGAAGCCAAGCCTGAATA+TGG | - | tig0027765:20409-20428 | Msa1435650:CDS | 45.0% | |
| ! | CATAGAGAAGGTGCGTTGAA+GGG | - | tig0027765:20904-20923 | Msa1435650:CDS | 45.0% |
| ! | AACACTTCGGGTGCTTTGAA+GGG | + | tig0027765:20950-20969 | Msa1435640:intron | 45.0% |
| GTGTAAGCCCAAAGTGGAAT+CGG | + | tig0027765:20975-20994 | Msa1435640:intron | 45.0% | |
| TGTAAGCCCAAAGTGGAATC+GGG | + | tig0027765:20976-20995 | Msa1435640:intron | 45.0% | |
| GTGATAACCCGATTCCACTT+TGG | - | tig0027765:20986-21005 | None:intergenic | 45.0% | |
| AGTCAAACGCCCCACAAATT+TGG | - | tig0027765:21023-21042 | None:intergenic | 45.0% | |
| CAAAATCAATCCCTCGAGAG+AGG | - | tig0027765:21104-21123 | None:intergenic | 45.0% | |
| CAAAATCAATCCCTCGAGAG+AGG | - | tig0027765:21104-21123 | None:intergenic | 45.0% | |
| ! | TCACATTTCCAAGGGTGTAG+TGG | - | tig0027765:21420-21439 | None:intergenic | 45.0% |
| TTCACACAAGTGGTCATCTG+TGG | - | tig0027765:21726-21745 | None:intergenic | 45.0% | |
| TCAAGATGGGGTCAGTTCAA+TGG | + | tig0027765:21776-21795 | Msa1435640:intron | 45.0% | |
| ACAAGAAGCTGCTAGTGGAA+TGG | - | tig0027765:21953-21972 | None:intergenic | 45.0% | |
| GGGAAGGCCTTGAAAGATTA+AGG | - | tig0027765:21996-22015 | None:intergenic | 45.0% | |
| TGTGAACCATGACTAAGGGA+AGG | - | tig0027765:22012-22031 | None:intergenic | 45.0% | |
| ! | AGGGCGTAAGATGTTTCTGA+GGG | - | tig0027765:22062-22081 | None:intergenic | 45.0% |
| ! | AGATTTGTAAGCTGGTTCCG+GGG | - | tig0027765:22130-22149 | None:intergenic | 45.0% |
| ! | GGTGGAACATTGGTAGTCTT+AGG | - | tig0027765:22156-22175 | None:intergenic | 45.0% |
| GGTATATGGCACACAAGGAA+TGG | - | tig0027765:22201-22220 | None:intergenic | 45.0% | |
| GTTATTCGCGCACTAAAGCA+TGG | - | tig0027765:22359-22378 | None:intergenic | 45.0% | |
| GAAGATGCTGAACATGACGT+TGG | + | tig0027765:22700-22719 | Msa1435640:CDS | 45.0% | |
| AGGAACCTTGTGCTAAGAAG+AGG | + | tig0027765:22932-22951 | Msa1435640:CDS | 45.0% | |
| CAACCATGTCCATATGTTGG+AGG | - | tig0027765:22999-23018 | None:intergenic | 45.0% | |
| CAGCAACCATGTCCATATGT+TGG | - | tig0027765:23002-23021 | None:intergenic | 45.0% | |
| ! | GAGGATAGAAACTGGTCTCA+AGG | + | tig0027765:23071-23090 | Msa1435640:CDS | 45.0% |
| AAGGAAGGACAAAATGGGGA+AGG | + | tig0027765:23116-23135 | Msa1435640:CDS | 45.0% | |
| GTGGGATCAATAGCATAGTC+AGG | - | tig0027765:23222-23241 | None:intergenic | 45.0% | |
| CGCTTCACACCTATTTGGTT+CGG | + | tig0027765:23392-23411 | Msa1435640:intron | 45.0% | |
| !! | TCAGAAGTGCTGCATATGTC+AGG | + | tig0027765:23685-23704 | Msa1435640:intron | 45.0% |
| ACACAAGCAGAAGGGTCAAA+TGG | + | tig0027765:23719-23738 | Msa1435640:CDS | 45.0% | |
| CCTTGTCTGACCATCTTGAT+TGG | - | tig0027765:23876-23895 | None:intergenic | 45.0% | |
| CCAATCAAGATGGTCAGACA+AGG | + | tig0027765:23873-23892 | Msa1435640:CDS | 45.0% | |
| GATGGTCAGACAAGGAAAGA+TGG | + | tig0027765:23881-23900 | Msa1435640:CDS | 45.0% | |
| AGGAGTCCACATCGTAGATA+TGG | - | tig0027765:24020-24039 | None:intergenic | 45.0% | |
| !!! | TAATTCATATTATTTATTTT+CGG | + | tig0027765:17952-17971 | Msa1435640:intron | 5.0% |
| !!! | ATAATCTAAAATTTAAAAAA+AGG | + | tig0027765:23097-23116 | Msa1435640:CDS | 5.0% |
| GTGTGCACTCCTACAAAACG+AGG | - | tig0027765:16777-16796 | None:intergenic | 50.0% | |
| TCTGCACCAATCGACAAGAG+AGG | + | tig0027765:16894-16913 | Msa1435640:CDS | 50.0% | |
| ! | TAGGCTGGCTGTTGTCAACA+TGG | + | tig0027765:17263-17282 | Msa1435640:CDS | 50.0% |
| TGGCTGTTGTCAACATGGAC+TGG | + | tig0027765:17268-17287 | Msa1435640:CDS | 50.0% | |
| CGTTGAAGCCCAAACTCAGT+TGG | - | tig0027765:17453-17472 | None:intergenic | 50.0% | |
| CCTATCAGAAGAGCAGGATG+CGG | + | tig0027765:17559-17578 | Msa1435640:CDS | 50.0% | |
| CACGGCACGAGTCAATTTCA+TGG | - | tig0027765:17597-17616 | None:intergenic | 50.0% | |
| AGAACCTGCAGAGGCAGATA+AGG | - | tig0027765:18735-18754 | None:intergenic | 50.0% | |
| CAGCATGATAGAACCTGCAG+AGG | - | tig0027765:18744-18763 | None:intergenic | 50.0% | |
| CTGCAGGTTCTATCATGCTG+TGG | + | tig0027765:18744-18763 | Msa1435640:intron | 50.0% | |
| CAGGTTCTATCATGCTGTGG+TGG | + | tig0027765:18747-18766 | Msa1435640:intron | 50.0% | |
| GGGAATTCAAACAGGAGCCT+AGG | + | tig0027765:18869-18888 | Msa1435640:CDS | 50.0% | |
| GCCTAGGGATGTTGTGACAA+AGG | + | tig0027765:18885-18904 | Msa1435640:CDS | 50.0% | |
| !! | GCAGGTACCTGAGCATTGAA+AGG | - | tig0027765:18970-18989 | None:intergenic | 50.0% |
| TGAGTGGAAACTGCGGAGTT+AGG | - | tig0027765:19334-19353 | None:intergenic | 50.0% | |
| GAGTGAGTGAGTGGAAACTG+CGG | - | tig0027765:19341-19360 | None:intergenic | 50.0% | |
| GTATCTGGTGAGTGAGTGAG+TGG | - | tig0027765:19350-19369 | None:intergenic | 50.0% | |
| !! | TTCAGTTGCTAGGGGGTATC+TGG | - | tig0027765:19365-19384 | None:intergenic | 50.0% |
| GTCTCTCGAATACCTACCGT+GGG | - | tig0027765:19478-19497 | None:intergenic | 50.0% | |
| AGTCTCTCGAATACCTACCG+TGG | - | tig0027765:19479-19498 | None:intergenic | 50.0% | |
| !! | CTTGGGGCCTTTTTGGCATT+AGG | - | tig0027765:19511-19530 | None:intergenic | 50.0% |
| AAATGCTACTCGGCCCATGT+AGG | + | tig0027765:19814-19833 | Msa1435640:intron | 50.0% | |
| ACCAACCGAGCTACCTACAT+GGG | - | tig0027765:19830-19849 | None:intergenic | 50.0% | |
| !! | TAGCTCGGTTGGTGAGCTAA+GGG | + | tig0027765:19837-19856 | Msa1435640:intron | 50.0% |
| AGGAAAATGCTAGCGGGGAA+GGG | - | tig0027765:19916-19935 | None:intergenic | 50.0% | |
| AAGGAAAATGCTAGCGGGGA+AGG | - | tig0027765:19917-19936 | None:intergenic | 50.0% | |
| ! | TTGATGACCTGCATCCCAGT+CGG | + | tig0027765:20868-20887 | Msa1435640:intron | 50.0% |
| TGTAAATCCGACTGGGATGC+AGG | - | tig0027765:20878-20897 | Msa1435650:CDS | 50.0% | |
| ! | GCATAGAGAAGGTGCGTTGA+AGG | - | tig0027765:20905-20924 | Msa1435650:CDS | 50.0% |
| ! | CTTCAAAGCACCCGAAGTGT+TGG | - | tig0027765:20951-20970 | None:intergenic | 50.0% |
| CAACACTTCGGGTGCTTTGA+AGG | + | tig0027765:20949-20968 | Msa1435640:intron | 50.0% | |
| ! | AGGGAAGTGTAAGCCCAAAG+TGG | + | tig0027765:20969-20988 | Msa1435640:intron | 50.0% |
| GGAAAGATCCACTACACCCT+TGG | + | tig0027765:21409-21428 | Msa1435640:intron | 50.0% | |
| TCAAGGCCTTCCCTTAGTCA+TGG | + | tig0027765:22003-22022 | Msa1435640:intron | 50.0% | |
| ! | GAGGGCGTAAGATGTTTCTG+AGG | - | tig0027765:22063-22082 | None:intergenic | 50.0% |
| ACATGACGTTGGCCAAGAGA+TGG | + | tig0027765:22711-22730 | Msa1435640:CDS | 50.0% | |
| ATGGAGGTGACCTTCCATTC+AGG | + | tig0027765:22730-22749 | Msa1435640:CDS | 50.0% | |
| GGTGACCTTCCATTCAGGAT+TGG | + | tig0027765:22735-22754 | Msa1435640:CDS | 50.0% | |
| !! | CAGTTTGGGAAGCATTTCGG+AGG | + | tig0027765:22806-22825 | Msa1435640:CDS | 50.0% |
| !! | GGGAAGCATTTCGGAGGAAA+AGG | + | tig0027765:22812-22831 | Msa1435640:CDS | 50.0% |
| CAGCTAGCACACAAGCAGAA+GGG | + | tig0027765:23711-23730 | Msa1435640:CDS | 50.0% | |
| ATGGCTGCGGCATAATAGCA+TGG | - | tig0027765:24001-24020 | None:intergenic | 50.0% | |
| CCACATCGTAGATATGGCTG+CGG | - | tig0027765:24014-24033 | None:intergenic | 50.0% | |
| !! | CACAGACCCTCGTTTTCGAG+AGG | + | tig0027765:16794-16813 | Msa1435640:CDS | 55.0% |
| CACCAATCGACAAGAGAGGC+AGG | + | tig0027765:16898-16917 | Msa1435640:CDS | 55.0% | |
| TGCGTGCCTATCAGAAGAGC+AGG | + | tig0027765:17553-17572 | Msa1435640:CDS | 55.0% | |
| CCGCATCCTGCTCTTCTGAT+AGG | - | tig0027765:17562-17581 | None:intergenic | 55.0% | |
| CCATTCAGGCCAGTGTGTCA+CGG | - | tig0027765:17615-17634 | None:intergenic | 55.0% | |
| CACCAACCGAGCTACCTACA+TGG | - | tig0027765:19831-19850 | None:intergenic | 55.0% | |
| !! | GTAGCTCGGTTGGTGAGCTA+AGG | + | tig0027765:19836-19855 | Msa1435640:intron | 55.0% |
| GGAAAATGCTAGCGGGGAAG+GGG | - | tig0027765:19915-19934 | None:intergenic | 55.0% | |
| TATGGCTCTCCGTCTCCTGA+GGG | - | tig0027765:20763-20782 | Msa1435650:CDS | 55.0% | |
| ! | AGGTTGTGGAGCGTTTGGCT+AGG | - | tig0027765:20831-20850 | Msa1435650:CDS | 55.0% |
| AGCCAAACGCTCCACAACCT+TGG | + | tig0027765:20831-20850 | Msa1435640:intron | 55.0% | |
| ! | CACCAAGGTTGTGGAGCGTT+TGG | - | tig0027765:20836-20855 | Msa1435650:CDS | 55.0% |
| TCTGCCTTTCCCTCTCTCGA+GGG | + | tig0027765:21091-21110 | Msa1435640:intron | 55.0% | |
| CAATCCCTCGAGAGAGGGAA+AGG | - | tig0027765:21098-21117 | None:intergenic | 55.0% | |
| TCTGCCTTTCCCTCTCTCGA+GGG | + | tig0027765:21091-21110 | Msa1435640:intron | 55.0% | |
| CAATCCCTCGAGAGAGGGAA+AGG | - | tig0027765:21098-21117 | None:intergenic | 55.0% | |
| TGACGTTGGCCAAGAGATGG+AGG | + | tig0027765:22714-22733 | Msa1435640:CDS | 55.0% | |
| GGAAGGTCACCTCCATCTCT+TGG | - | tig0027765:22726-22745 | None:intergenic | 55.0% | |
| GCAGCTAGCACACAAGCAGA+AGG | + | tig0027765:23710-23729 | Msa1435640:CDS | 55.0% | |
| CCGCAGCCATATCTACGATG+TGG | + | tig0027765:24011-24030 | Msa1435640:three_prime_UTR | 55.0% | |
| GGCCTGCCTCTCTTGTCGAT+TGG | - | tig0027765:16903-16922 | None:intergenic | 60.0% | |
| TGACTCGTGCCGTGACACAC+TGG | + | tig0027765:17603-17622 | Msa1435640:intron | 60.0% | |
| ! | CCGTGACACACTGGCCTGAA+TGG | + | tig0027765:17612-17631 | Msa1435640:intron | 60.0% |
| CTCGGCCCATGTAGGTAGCT+CGG | + | tig0027765:19822-19841 | Msa1435640:intron | 60.0% | |
| GCCCATGTAGGTAGCTCGGT+TGG | + | tig0027765:19826-19845 | Msa1435640:intron | 60.0% | |
| CTATGGCTCTCCGTCTCCTG+AGG | - | tig0027765:20764-20783 | Msa1435650:CDS | 60.0% | |
| CTCTGCCTTTCCCTCTCTCG+AGG | + | tig0027765:21090-21109 | Msa1435640:intron | 60.0% | |
| CTCTGCCTTTCCCTCTCTCG+AGG | + | tig0027765:21090-21109 | Msa1435640:intron | 60.0% | |
| ! | TGGTGGATGCTGCTCCAGCA+TGG | - | tig0027765:21846-21865 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027765 | gene | 16705 | 24131 | 16705 | ID=Msa1435640;Name=Msa1435640 |
| tig0027765 | mRNA | 16705 | 24131 | 16705 | ID=Msa1435640-mRNA-1;Parent=Msa1435640;Name=Msa1435640-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.75|0.66|0.88|0.87|0.77|9|177|646 |
| tig0027765 | exon | 16705 | 17121 | 16705 | ID=Msa1435640-mRNA-1:exon:9795;Parent=Msa1435640-mRNA-1 |
| tig0027765 | exon | 17225 | 17302 | 17225 | ID=Msa1435640-mRNA-1:exon:9796;Parent=Msa1435640-mRNA-1 |
| tig0027765 | exon | 17378 | 17580 | 17378 | ID=Msa1435640-mRNA-1:exon:9797;Parent=Msa1435640-mRNA-1 |
| tig0027765 | exon | 18750 | 18906 | 18750 | ID=Msa1435640-mRNA-1:exon:9798;Parent=Msa1435640-mRNA-1 |
| tig0027765 | exon | 18982 | 19110 | 18982 | ID=Msa1435640-mRNA-1:exon:9799;Parent=Msa1435640-mRNA-1 |
| tig0027765 | exon | 22556 | 23258 | 22556 | ID=Msa1435640-mRNA-1:exon:9800;Parent=Msa1435640-mRNA-1 |
| tig0027765 | exon | 23581 | 23605 | 23581 | ID=Msa1435640-mRNA-1:exon:9801;Parent=Msa1435640-mRNA-1 |
| tig0027765 | exon | 23689 | 23919 | 23689 | ID=Msa1435640-mRNA-1:exon:9802;Parent=Msa1435640-mRNA-1 |
| tig0027765 | exon | 23957 | 24131 | 23957 | ID=Msa1435640-mRNA-1:exon:9803;Parent=Msa1435640-mRNA-1 |
| tig0027765 | CDS | 16705 | 17121 | 16705 | ID=Msa1435640-mRNA-1:cds;Parent=Msa1435640-mRNA-1 |
| tig0027765 | CDS | 17225 | 17302 | 17225 | ID=Msa1435640-mRNA-1:cds;Parent=Msa1435640-mRNA-1 |
| tig0027765 | CDS | 17378 | 17580 | 17378 | ID=Msa1435640-mRNA-1:cds;Parent=Msa1435640-mRNA-1 |
| tig0027765 | CDS | 18750 | 18906 | 18750 | ID=Msa1435640-mRNA-1:cds;Parent=Msa1435640-mRNA-1 |
| tig0027765 | CDS | 18982 | 19110 | 18982 | ID=Msa1435640-mRNA-1:cds;Parent=Msa1435640-mRNA-1 |
| tig0027765 | CDS | 22556 | 23258 | 22556 | ID=Msa1435640-mRNA-1:cds;Parent=Msa1435640-mRNA-1 |
| tig0027765 | CDS | 23581 | 23605 | 23581 | ID=Msa1435640-mRNA-1:cds;Parent=Msa1435640-mRNA-1 |
| tig0027765 | CDS | 23689 | 23917 | 23689 | ID=Msa1435640-mRNA-1:cds;Parent=Msa1435640-mRNA-1 |
| tig0027765 | three_prime_UTR | 23918 | 23919 | 23918 | ID=Msa1435640-mRNA-1:three_prime_utr;Parent=Msa1435640-mRNA-1 |
| tig0027765 | three_prime_UTR | 23957 | 24131 | 23957 | ID=Msa1435640-mRNA-1:three_prime_utr;Parent=Msa1435640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
