Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429850 | AES89389.2 | 80.218 | 642 | 102 | 11 | 1 | 629 | 1 | 630 | 0.0 | 892 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429850 | sp|O74828|ESF1_SCHPO | 31.977 | 688 | 344 | 24 | 20 | 610 | 19 | 679 | 2.25e-69 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429850 | G7JNE8 | 80.218 | 642 | 102 | 11 | 1 | 629 | 1 | 630 | 0.0 | 892 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1429850 | Msa1435640 | 0.817604 | 3.025847e-52 | -8.615850e-47 |
| Msa0382540 | Msa1429850 | 0.898036 | 7.860641e-77 | -8.615850e-47 |
| Msa0525220 | Msa1429850 | 0.842439 | 2.584254e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429850 | MtrunA17_Chr4g0052231 | 52.000 | 700 | 250 | 23 | 18 | 644 | 47 | 733 | 2.56e-175 | 516 |
| Msa1429850 | MtrunA17_Chr4g0037051 | 80.357 | 336 | 55 | 6 | 1 | 329 | 1 | 332 | 3.77e-168 | 486 |
| Msa1429850 | MtrunA17_Chr4g0037061 | 72.485 | 338 | 49 | 6 | 327 | 629 | 12 | 340 | 4.08e-133 | 395 |
| Msa1429850 | MtrunA17_Chr3g0137811 | 86.207 | 116 | 11 | 2 | 519 | 629 | 1 | 116 | 4.38e-60 | 197 |
| Msa1429850 | MtrunA17_Chr3g0137801 | 89.516 | 124 | 13 | 0 | 363 | 486 | 1 | 124 | 7.03e-60 | 196 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429850 | AT3G01160.1 | 41.655 | 689 | 280 | 21 | 20 | 625 | 30 | 679 | 1.97e-133 | 408 |
Find 117 sgRNAs with CRISPR-Local
Find 455 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTAGTCCACTTGATTTA+AGG | 0.103671 | tig0026572:-43198 | Msa1429850:CDS |
| TATCTTAGTTTGGTCTATTC+AGG | 0.231031 | tig0026572:-39459 | Msa1429850:CDS |
| CCTTGTCTGACCATCTTGAT+TGG | 0.265105 | tig0026572:+38233 | None:intergenic |
| TAAGGTTTATTCCTGACATT+TGG | 0.265200 | tig0026572:-43180 | Msa1429850:CDS |
| AGAAGAAGAAGAAGGAGAAC+AGG | 0.271293 | tig0026572:-44453 | Msa1429850:CDS |
| AACTACGTAGTCAAAGATTT+TGG | 0.274407 | tig0026572:-43037 | Msa1429850:CDS |
| GCTGTCTATCCAACTGAGTT+TGG | 0.281054 | tig0026572:-44004 | Msa1429850:CDS |
| CTACCAATCCACAATTTAAA+AGG | 0.288495 | tig0026572:-38885 | Msa1429850:intron |
| CTGTCTATCCAACTGAGTTT+GGG | 0.310560 | tig0026572:-44003 | Msa1429850:CDS |
| AAAAGACATTTGCATTACTT+TGG | 0.325778 | tig0026572:+38369 | None:intergenic |
| ATTTAGCATGGTGCTAAATA+AGG | 0.333267 | tig0026572:+38103 | None:intergenic |
| AGAAGGAGAACAGGGATTGA+TGG | 0.333327 | tig0026572:-44444 | Msa1429850:CDS |
| ACAAGATATGTATCTTAGTT+TGG | 0.334345 | tig0026572:-39469 | Msa1429850:CDS |
| ATGGAGGTGACCTTCCATTC+AGG | 0.349398 | tig0026572:-39393 | Msa1429850:CDS |
| AAAGACATTTGCATTACTTT+GGG | 0.354034 | tig0026572:+38370 | None:intergenic |
| CTTCTTCTACTTTGTAGTAA+TGG | 0.364768 | tig0026572:+44480 | None:intergenic |
| AAACAGTTTGGGAAGCATTT+CGG | 0.373490 | tig0026572:-39320 | Msa1429850:CDS |
| ATAAAAGATCAGAAACAGTT+TGG | 0.382446 | tig0026572:-39332 | Msa1429850:CDS |
| AAGGTTTATTCCTGACATTT+GGG | 0.408401 | tig0026572:-43179 | Msa1429850:CDS |
| GCTTTAATAGCTTGCTCAGT+TGG | 0.409614 | tig0026572:-39577 | Msa1429850:intron |
| CCGCATCCTGCTCTTCTGAT+AGG | 0.410075 | tig0026572:+43886 | None:intergenic |
| TGACATTTGGGAATTCAAAC+AGG | 0.431467 | tig0026572:-43167 | Msa1429850:CDS |
| GGGAAGCATTTCGGAGGAAA+AGG | 0.439702 | tig0026572:-39311 | Msa1429850:CDS |
| TAAAAGATCAGAAACAGTTT+GGG | 0.450088 | tig0026572:-39331 | Msa1429850:CDS |
| AAGAAAATTTACTGATGAGC+AGG | 0.451778 | tig0026572:-42939 | Msa1429850:intron |
| AGGAGTCCACATCGTAGATA+TGG | 0.452465 | tig0026572:+38127 | None:intergenic |
| ATTTGATCATTCCATTCGTT+GGG | 0.460852 | tig0026572:+44032 | None:intergenic |
| TCATCACTATATGTACTGTT+TGG | 0.467432 | tig0026572:+38955 | None:intergenic |
| GAAGGATAAGAAAGAAGGAT+TGG | 0.467803 | tig0026572:-38332 | Msa1429850:CDS |
| GTTGGAATGGAAAGAATACT+TGG | 0.472915 | tig0026572:-39559 | Msa1429850:CDS |
| TACTGACACGCTTGATATGC+AGG | 0.477038 | tig0026572:-44345 | Msa1429850:intron |
| AGTTTGGTCTATTCAGGCAA+TGG | 0.477065 | tig0026572:-39453 | Msa1429850:CDS |
| TCAGAAGTGCTGCATATGTC+AGG | 0.485957 | tig0026572:-38438 | Msa1429850:intron |
| ATGATGATCCCTTTCGCAAA+AGG | 0.486579 | tig0026572:-42970 | Msa1429850:CDS |
| TGTTTGAATTCCCAAATGTC+AGG | 0.487735 | tig0026572:+43169 | None:intergenic |
| GGAAGGTCACCTCCATCTCT+TGG | 0.492100 | tig0026572:+39400 | None:intergenic |
| AATTCATTTGTCCCAACGAA+TGG | 0.492101 | tig0026572:-44043 | Msa1429850:CDS |
| GTCCACATCGTAGATATGGC+TGG | 0.493784 | tig0026572:+38131 | None:intergenic |
| TTCTTCCTCTTCTTAGCACA+AGG | 0.493874 | tig0026572:+39186 | None:intergenic |
| GATTTGATCATTCCATTCGT+TGG | 0.497978 | tig0026572:+44031 | None:intergenic |
| TTAGACATTCCAATCCTGAA+TGG | 0.500488 | tig0026572:+39379 | None:intergenic |
| AATAGCTTGCTCAGTTGGAA+TGG | 0.502815 | tig0026572:-39572 | Msa1429850:intron |
| GGGAATTCAAACAGGAGCCT+AGG | 0.504845 | tig0026572:-43159 | Msa1429850:CDS |
| GATGACAAGAGGATAGAAAC+TGG | 0.506109 | tig0026572:-39060 | Msa1429850:CDS |
| TGCGTGCCTATCAGAAGAGC+AGG | 0.506500 | tig0026572:-43892 | Msa1429850:CDS |
| GTAGGATCAATAGCATAGTC+AGG | 0.510491 | tig0026572:+38904 | None:intergenic |
| TCCACATCGTAGATATGGCT+GGG | 0.511087 | tig0026572:+38132 | None:intergenic |
| GATGGTCAGACAAGGAAAGA+TGG | 0.511671 | tig0026572:-38225 | Msa1429850:CDS |
| GGTGACCTTCCATTCAGGAT+TGG | 0.516982 | tig0026572:-39388 | Msa1429850:CDS |
| TGATTGAGAAAGATACTCAT+AGG | 0.520942 | tig0026572:-44201 | Msa1429850:CDS |
| ACACAAGCAGAAGGGTCAAA+TGG | 0.522132 | tig0026572:-38404 | Msa1429850:CDS |
| ACATAATAACCTCCAACGTA+TGG | 0.523245 | tig0026572:-39136 | Msa1429850:CDS |
| GAGGATAGAAACTGGTCTCA+AGG | 0.527889 | tig0026572:-39052 | Msa1429850:CDS |
| GGCCTGCCTCTCTTGTCGAT+TGG | 0.527987 | tig0026572:+44542 | None:intergenic |
| GCAGCTAGCACACAAGCAGA+AGG | 0.534408 | tig0026572:-38413 | Msa1429850:CDS |
| CACATTTACAAAGAATGTAA+TGG | 0.534661 | tig0026572:-43232 | Msa1429850:CDS |
| AACGAATGGAATGATCAAAT+CGG | 0.535386 | tig0026572:-44029 | Msa1429850:CDS |
| ATGCAGAAGGATAAGAAAGA+AGG | 0.537357 | tig0026572:-38337 | Msa1429850:CDS |
| ACATATTTGGTATGAAATCG+TGG | 0.538508 | tig0026572:-44748 | None:intergenic |
| AGCAGATGAATTCTTCATTG+AGG | 0.539702 | tig0026572:-39211 | Msa1429850:CDS |
| TTTGTAAATGTGAGCTGCTG+TGG | 0.539886 | tig0026572:+43243 | None:intergenic |
| TGGGCTTCAACGTATGAAAG+AGG | 0.540071 | tig0026572:-43984 | Msa1429850:CDS |
| CACCAATCGACAAGAGAGGC+AGG | 0.541791 | tig0026572:-44544 | Msa1429850:CDS |
| TAACAGTGAGACTGATGATC+AGG | 0.542635 | tig0026572:-39511 | Msa1429850:CDS |
| GGAGAATGTTATTATTGATG+AGG | 0.542911 | tig0026572:-38986 | Msa1429850:CDS |
| AGGAGAACAGGGATTGATGG+AGG | 0.543376 | tig0026572:-44441 | Msa1429850:CDS |
| CGTTGAAGCCCAAACTCAGT+TGG | 0.548103 | tig0026572:+43995 | None:intergenic |
| GGAATAAACCTTAAATCAAG+TGG | 0.549824 | tig0026572:+43190 | None:intergenic |
| TGATGATCAGGTTGATGAGA+AGG | 0.554035 | tig0026572:-39499 | Msa1429850:CDS |
| AGGATAGAAACTGGTCTCAA+GGG | 0.554727 | tig0026572:-39051 | Msa1429850:CDS |
| TGAGAAAGATACTCATAGGC+TGG | 0.559647 | tig0026572:-44197 | Msa1429850:CDS |
| GAGAATGTTATTATTGATGA+GGG | 0.560141 | tig0026572:-38985 | Msa1429850:CDS |
| TAGGCTGGCTGTTGTCAACA+TGG | 0.560464 | tig0026572:-44182 | Msa1429850:CDS |
| GGAATTCAAACAGGAGCCTA+GGG | 0.560571 | tig0026572:-43158 | Msa1429850:CDS |
| TGGCTGTTGTCAACATGGAC+TGG | 0.565171 | tig0026572:-44177 | Msa1429850:CDS |
| GAAGAAGAAGAAGGAGAACA+GGG | 0.570380 | tig0026572:-44452 | Msa1429850:CDS |
| CAGGTTCTATCATGCTGTGG+TGG | 0.572382 | tig0026572:-43281 | Msa1429850:CDS |
| AAGGAAGGACAAAATGGGGA+AGG | 0.573640 | tig0026572:-39007 | Msa1429850:CDS |
| AGGAACCTTGTGCTAAGAAG+AGG | 0.574343 | tig0026572:-39191 | Msa1429850:CDS |
| ACATGACGTTGGCCAAGAGA+TGG | 0.575828 | tig0026572:-39412 | Msa1429850:CDS |
| CAAAGCAGATCCAATCAAGA+TGG | 0.576704 | tig0026572:-38243 | Msa1429850:CDS |
| ACATTCCAATCCTGAATGGA+AGG | 0.577659 | tig0026572:+39383 | None:intergenic |
| TTTAGAGCCTCTCGAAAACG+AGG | 0.584508 | tig0026572:+44641 | None:intergenic |
| GCCTAGGGATGTTGTGACAA+AGG | 0.591762 | tig0026572:-43143 | Msa1429850:intron |
| GAAAATCAGATTTCAAAGTG+AGG | 0.592350 | tig0026572:+44507 | None:intergenic |
| TCTTTGACTACGTAGTTCGC+AGG | 0.593079 | tig0026572:+43043 | None:intergenic |
| CAACCATGTCCATACGTTGG+AGG | 0.593698 | tig0026572:+39127 | None:intergenic |
| ACCTTTGTCACAACATCCCT+AGG | 0.596897 | tig0026572:+43142 | None:intergenic |
| CTGCAGGTTCTATCATGCTG+TGG | 0.598849 | tig0026572:-43284 | Msa1429850:intron |
| CAGTTTGGGAAGCATTTCGG+AGG | 0.599530 | tig0026572:-39317 | Msa1429850:CDS |
| CAGCTAGCACACAAGCAGAA+GGG | 0.600301 | tig0026572:-38412 | Msa1429850:CDS |
| TATTGCTTGCTGATGACAAG+AGG | 0.600984 | tig0026572:-39071 | Msa1429850:CDS |
| AAAAGAAGCGCAACAAAACG+TGG | 0.602912 | tig0026572:+38931 | None:intergenic |
| GGCTCTAAAGAATGAAACAA+AGG | 0.605109 | tig0026572:-44627 | Msa1429850:CDS |
| CCAATCAAGATGGTCAGACA+AGG | 0.606384 | tig0026572:-38233 | Msa1429850:CDS |
| AGCATGGTGCTAAATAAGGA+AGG | 0.611384 | tig0026572:+38107 | None:intergenic |
| CATATTTGGTATGAAATCGT+GGG | 0.616683 | tig0026572:-44747 | None:intergenic |
| CCTATCAGAAGAGCAGGATG+CGG | 0.628504 | tig0026572:-43886 | Msa1429850:intron |
| AGTCAAATGGAACAAATCCA+CGG | 0.635400 | tig0026572:+43954 | None:intergenic |
| CCACATCGTAGATATGGCTG+GGG | 0.638849 | tig0026572:+38133 | None:intergenic |
| TGACGTTGGCCAAGAGATGG+AGG | 0.643765 | tig0026572:-39409 | Msa1429850:CDS |
| ATGAAAGAGGAGAATAGCCG+TGG | 0.646240 | tig0026572:-43971 | Msa1429850:CDS |
| ATTAGTGTGCATATTTAGCA+TGG | 0.649659 | tig0026572:+38091 | None:intergenic |
| CAGCAACCATGTCCATACGT+TGG | 0.651119 | tig0026572:+39124 | None:intergenic |
| CCCCAGCCATATCTACGATG+TGG | 0.652853 | tig0026572:-38133 | Msa1429850:three_prime_UTR |
| ATGGCTGGGGCATAATAGCA+TGG | 0.653314 | tig0026572:+38146 | None:intergenic |
| TAACCTCCAACGTATGGACA+TGG | 0.658301 | tig0026572:-39130 | Msa1429850:CDS |
| TATAAATTAGGAACTCGAAG+AGG | 0.658700 | tig0026572:-44230 | Msa1429850:intron |
| GAACACTGCATACAAGTCAA+CGG | 0.660177 | tig0026572:+44066 | None:intergenic |
| TCTAAAGAATGAAACAAAGG+TGG | 0.660637 | tig0026572:-44624 | Msa1429850:CDS |
| TTACTGTGCTGAAGTACTCG+AGG | 0.668752 | tig0026572:+43013 | None:intergenic |
| TTAGAGCCTCTCGAAAACGA+GGG | 0.685733 | tig0026572:+44642 | None:intergenic |
| AGAAGAGGAAGAAAGCACAA+AGG | 0.691103 | tig0026572:-39176 | Msa1429850:CDS |
| TCTGCACCAATCGACAAGAG+AGG | 0.697200 | tig0026572:-44548 | Msa1429850:CDS |
| GAAGATGCTGAACATGACGT+TGG | 0.698393 | tig0026572:-39423 | Msa1429850:CDS |
| GTGTGCACTCCTACAAAACG+AGG | 0.707117 | tig0026572:+44668 | None:intergenic |
| CATGGACTGGAACTATGTGA+AGG | 0.756163 | tig0026572:-44164 | Msa1429850:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAAAAAAAAAAAAAA+AGG | + | tig0026572:40668-40687 | None:intergenic | 0.0% |
| !! | AAATCCTAATATTTATTATT+AGG | - | tig0026572:40768-40787 | Msa1429850:intron | 10.0% |
| !! | TAATCCTAATAATAAATATT+AGG | + | tig0026572:40775-40794 | None:intergenic | 10.0% |
| !!! | TAAAAAAATTTGTTTATTAG+TGG | - | tig0026572:42243-42262 | Msa1429850:intron | 10.0% |
| !! | ATGTCTAAATAAAAAATTAA+TGG | - | tig0026572:43408-43427 | Msa1429850:intron | 10.0% |
| !! | TTAATAATCAATTAAAAGTT+TGG | + | tig0026572:43978-43997 | None:intergenic | 10.0% |
| !!! | TTTTGTTGTTGTTATAAATT+AGG | - | tig0026572:38530-38549 | Msa1429850:intron | 15.0% |
| !!! | ATCATTTTGTTTTTTGTTAT+AGG | - | tig0026572:38683-38702 | Msa1429850:intron | 15.0% |
| !! | TTATGTTGTATGATAATAAT+TGG | - | tig0026572:39676-39695 | Msa1429850:intron | 15.0% |
| !! | TGGATAACATAAAAAAAAAA+TGG | - | tig0026572:39887-39906 | Msa1429850:intron | 15.0% |
| !!! | TTTTCAAATTTTTTAAGCTA+TGG | + | tig0026572:41517-41536 | None:intergenic | 15.0% |
| !! | ATAATGATTGACAAAATTAT+TGG | + | tig0026572:42168-42187 | None:intergenic | 15.0% |
| !!! | AATAATTTTGTCAATCATTA+TGG | - | tig0026572:42167-42186 | Msa1429850:intron | 15.0% |
| !! | TTATGTTTAACATAATATAG+TGG | + | tig0026572:42515-42534 | None:intergenic | 15.0% |
| !! | ATATTATGTTAAACATAACA+AGG | - | tig0026572:42517-42536 | Msa1429850:intron | 15.0% |
| !! | TTGAAATTTATCCATTAAAT+TGG | + | tig0026572:42741-42760 | None:intergenic | 15.0% |
| !! | AATGGATAAATTTCAAAATT+AGG | - | tig0026572:42745-42764 | Msa1429850:intron | 15.0% |
| !! | TAAAAAATTAATGGAAAAGA+AGG | - | tig0026572:43417-43436 | Msa1429850:intron | 15.0% |
| !!! | ATACTTCAATTTATTTTTGT+TGG | + | tig0026572:43503-43522 | None:intergenic | 15.0% |
| !!! | TCTAAAATTTAAAAAAAGGA+AGG | - | tig0026572:43750-43769 | Msa1429850:intron | 15.0% |
| !!! | TATATCTTGTTTAACTTAAA+AGG | - | tig0026572:44208-44227 | Msa1429850:CDS | 15.0% |
| !! | TGATATAATGAATGCTTAAA+GGG | + | tig0026572:39080-39099 | None:intergenic | 20.0% |
| !! | TTGATATAATGAATGCTTAA+AGG | + | tig0026572:39081-39100 | None:intergenic | 20.0% |
| !!! | ATTTTCTAAGATATACATTG+CGG | + | tig0026572:39354-39373 | None:intergenic | 20.0% |
| !! | GTAATTCACTATATTTATTG+TGG | - | tig0026572:39926-39945 | Msa1429850:intron | 20.0% |
| !! | TTTATCATTTGTATAGACTT+GGG | + | tig0026572:40272-40291 | None:intergenic | 20.0% |
| !!! | TTTTATCATTTGTATAGACT+TGG | + | tig0026572:40273-40292 | None:intergenic | 20.0% |
| !! | ACAGATAAATAATAAAATGC+AGG | - | tig0026572:40704-40723 | Msa1429850:intron | 20.0% |
| !! | TTCTACCAAAATTATTGTAT+GGG | + | tig0026572:40738-40757 | None:intergenic | 20.0% |
| !! | ATTCTACCAAAATTATTGTA+TGG | + | tig0026572:40739-40758 | None:intergenic | 20.0% |
| !! | AAATTATGTTCAACCTAATA+AGG | + | tig0026572:40815-40834 | None:intergenic | 20.0% |
| !!! | TTATTAGGTTGAACATAATT+TGG | - | tig0026572:40814-40833 | Msa1429850:intron | 20.0% |
| !! | TGAATAGTATACTTAACTTT+GGG | + | tig0026572:40933-40952 | None:intergenic | 20.0% |
| !! | ATAGAAAAATTGTTTACTGT+TGG | + | tig0026572:41069-41088 | None:intergenic | 20.0% |
| !! | TTCTATCCAAATATGAATTA+GGG | + | tig0026572:41182-41201 | None:intergenic | 20.0% |
| !! | TTTCTATCCAAATATGAATT+AGG | + | tig0026572:41183-41202 | None:intergenic | 20.0% |
| !!! | TGAAAATTCGATTTTATACT+TGG | - | tig0026572:41531-41550 | Msa1429850:intron | 20.0% |
| !!! | GAAAATTCGATTTTATACTT+GGG | - | tig0026572:41532-41551 | Msa1429850:intron | 20.0% |
| !! | AAATTTGGTTATCCTATAAA+AGG | + | tig0026572:41744-41763 | None:intergenic | 20.0% |
| !! | TTTAACTATTGTCATGAAAT+AGG | - | tig0026572:42037-42056 | Msa1429850:intron | 20.0% |
| !!! | TTATTGGACATTTTCATATT+TGG | + | tig0026572:42152-42171 | None:intergenic | 20.0% |
| !!! | AGAAAATACCTTTTAAATTG+TGG | + | tig0026572:43898-43917 | None:intergenic | 20.0% |
| !! | TAATCAATTAAAAGTTTGGT+TGG | + | tig0026572:43974-43993 | None:intergenic | 20.0% |
| !!! | TATAACAAATCATGTGTTTT+AGG | - | tig0026572:44143-44162 | Msa1429850:intron | 20.0% |
| !!! | ATAACAAATCATGTGTTTTA+GGG | - | tig0026572:44144-44163 | Msa1429850:intron | 20.0% |
| !!! | AGAAAACTAACTTTTAATTG+TGG | - | tig0026572:44305-44324 | Msa1429850:intron | 20.0% |
| !! | TTTTCACTTTCATAGTCAAA+TGG | + | tig0026572:38834-38853 | None:intergenic | 25.0% |
| !! | GACAATATCATTCTTTTAGT+AGG | - | tig0026572:39171-39190 | Msa1429850:CDS | 25.0% |
| ! | AAATAGTACAATATTGAACC+AGG | + | tig0026572:39394-39413 | None:intergenic | 25.0% |
| ! | CACATTTACAAAGAATGTAA+TGG | - | tig0026572:39540-39559 | Msa1429850:CDS | 25.0% |
| !!! | ACAGTAAAGTTGATTTTGAT+TGG | - | tig0026572:39775-39794 | Msa1429850:intron | 25.0% |
| !!! | CAGTAAAGTTGATTTTGATT+GGG | - | tig0026572:39776-39795 | Msa1429850:intron | 25.0% |
| ! | TTATCCATCAAGTTTAACAT+AGG | + | tig0026572:39874-39893 | None:intergenic | 25.0% |
| ! | TATATTTATTGTGGAAATCC+AGG | - | tig0026572:39935-39954 | Msa1429850:intron | 25.0% |
| ! | TAGAAATAATTGAGACTTTC+CGG | + | tig0026572:40054-40073 | None:intergenic | 25.0% |
| ! | TTATCATTTGTATAGACTTG+GGG | + | tig0026572:40271-40290 | None:intergenic | 25.0% |
| ! | TATAAATAGAGAGTAGTGAT+TGG | + | tig0026572:40307-40326 | None:intergenic | 25.0% |
| ! | AATCACTACTCTCTATTTAT+AGG | - | tig0026572:40306-40325 | Msa1429850:intron | 25.0% |
| ! | TTAAGTTAGTTAGTTAGTTG+TGG | + | tig0026572:40375-40394 | None:intergenic | 25.0% |
| ! | AAAAAAAAGGAAAATGCTAG+CGG | + | tig0026572:40655-40674 | None:intergenic | 25.0% |
| ! | ATGCAACAACATAATTCATA+TGG | - | tig0026572:40850-40869 | Msa1429850:intron | 25.0% |
| ! | TGCAACAACATAATTCATAT+GGG | - | tig0026572:40851-40870 | Msa1429850:intron | 25.0% |
| ! | GTGAATAGTATACTTAACTT+TGG | + | tig0026572:40934-40953 | None:intergenic | 25.0% |
| ! | TTAAGTATACTATTCACACA+AGG | - | tig0026572:40937-40956 | Msa1429850:intron | 25.0% |
| !!! | CTTTTGACTCTAATTTGTTA+AGG | - | tig0026572:41315-41334 | Msa1429850:intron | 25.0% |
| ! | AAATTTACATGCATTCTTGA+CGG | - | tig0026572:41346-41365 | Msa1429850:intron | 25.0% |
| ! | TTATAGGATAACCAAATTTG+TGG | - | tig0026572:41745-41764 | Msa1429850:intron | 25.0% |
| !! | TTTTGACAAAGTTTCAACAT+TGG | + | tig0026572:41869-41888 | None:intergenic | 25.0% |
| ! | AGATGTATATCAAAGAAAGT+GGG | - | tig0026572:41920-41939 | Msa1429850:intron | 25.0% |
| ! | TTTCAAGAATGCCTTTAAAT+TGG | - | tig0026572:41981-42000 | Msa1429850:intron | 25.0% |
| !!! | CTTTTGACTCTAATTTGATA+AGG | + | tig0026572:42013-42032 | None:intergenic | 25.0% |
| ! | TAGTATCAACTATAATCGAA+AGG | - | tig0026572:42120-42139 | Msa1429850:intron | 25.0% |
| ! | TGAATAGTATGCTTAAACTT+GGG | - | tig0026572:42391-42410 | Msa1429850:intron | 25.0% |
| ! | TGCAACAACATAATTCATAT+AGG | + | tig0026572:40851-40870 | None:intergenic | 25.0% |
| ! | TGTTTAACATAATATAGTGG+TGG | + | tig0026572:42512-42531 | None:intergenic | 25.0% |
| !!! | TAGTTACTTTTCACAATTGT+GGG | + | tig0026572:42543-42562 | None:intergenic | 25.0% |
| ! | AAAAGTAACTACAAGAATGT+TGG | - | tig0026572:42552-42571 | Msa1429850:intron | 25.0% |
| !! | TAAGTTGAATTTCTTAATGG+TGG | + | tig0026572:42823-42842 | None:intergenic | 25.0% |
| !! | GTCTAAGTTGAATTTCTTAA+TGG | + | tig0026572:42826-42845 | None:intergenic | 25.0% |
| ! | AATGATAAAACAACGACAAA+AGG | + | tig0026572:42871-42890 | None:intergenic | 25.0% |
| ! | TATTTACAGATATAGATCAC+TGG | + | tig0026572:42934-42953 | None:intergenic | 25.0% |
| ! | ACAAGATATGTATCTTAGTT+TGG | - | tig0026572:43303-43322 | Msa1429850:intron | 25.0% |
| ! | ATAAAAGATCAGAAACAGTT+TGG | - | tig0026572:43440-43459 | Msa1429850:intron | 25.0% |
| ! | TAAAAGATCAGAAACAGTTT+GGG | - | tig0026572:43441-43460 | Msa1429850:intron | 25.0% |
| ! | TAAAAAAAGGAAGGACAAAA+TGG | - | tig0026572:43759-43778 | Msa1429850:intron | 25.0% |
| ! | AAAAAAAGGAAGGACAAAAT+GGG | - | tig0026572:43760-43779 | Msa1429850:intron | 25.0% |
| ! | GAGAATGTTATTATTGATGA+GGG | - | tig0026572:43787-43806 | Msa1429850:intron | 25.0% |
| !! | ATACCTTTTAAATTGTGGAT+TGG | + | tig0026572:43893-43912 | None:intergenic | 25.0% |
| ! | AGCGATAAAAAGTAAAAACA+TGG | + | tig0026572:44026-44045 | None:intergenic | 25.0% |
| ! | AAAGACATTTGCATTACTTT+GGG | + | tig0026572:44405-44424 | None:intergenic | 25.0% |
| ! | AAAAGACATTTGCATTACTT+TGG | + | tig0026572:44406-44425 | None:intergenic | 25.0% |
| ! | AATTGCACCACTAAAAAAAA+TGG | - | tig0026572:44701-44720 | Msa1429850:CDS | 25.0% |
| !!! | TTAGCATCCATTTTTTTTAG+TGG | + | tig0026572:44711-44730 | None:intergenic | 25.0% |
| TCTAAAGAATGAAACAAAGG+TGG | - | tig0026572:38148-38167 | Msa1429850:three_prime_UTR | 30.0% | |
| !! | AAAGTGAGGTTGTTTTCTAT+GGG | + | tig0026572:38254-38273 | None:intergenic | 30.0% |
| GAAAATCAGATTTCAAAGTG+AGG | + | tig0026572:38268-38287 | None:intergenic | 30.0% | |
| CTTCTTCTACTTTGTAGTAA+TGG | + | tig0026572:38295-38314 | None:intergenic | 30.0% | |
| TATAAATTAGGAACTCGAAG+AGG | - | tig0026572:38542-38561 | Msa1429850:intron | 30.0% | |
| TGATTGAGAAAGATACTCAT+AGG | - | tig0026572:38571-38590 | Msa1429850:intron | 30.0% | |
| ! | ATGTTAAGAGTTGGAACTTT+TGG | - | tig0026572:38636-38655 | Msa1429850:intron | 30.0% |
| ATTTGATCATTCCATTCGTT+GGG | + | tig0026572:38743-38762 | None:intergenic | 30.0% | |
| AACGAATGGAATGATCAAAT+CGG | - | tig0026572:38743-38762 | Msa1429850:intron | 30.0% | |
| CTTCAGTGTTAAAGTATGTT+TGG | + | tig0026572:39126-39145 | None:intergenic | 30.0% | |
| TGAAGAGTAATGTGTAAACA+TGG | - | tig0026572:39141-39160 | Msa1429850:CDS | 30.0% | |
| ATTACACTCCCAAAAATACA+TGG | - | tig0026572:39194-39213 | Msa1429850:CDS | 30.0% | |
| ! | ACTGCTTACCATGTATTTTT+GGG | + | tig0026572:39205-39224 | None:intergenic | 30.0% |
| ATGAATTACAAGTGAGACAT+AGG | + | tig0026572:39269-39288 | None:intergenic | 30.0% | |
| !! | TACAACTTTTTCTGTATTCC+TGG | - | tig0026572:39373-39392 | Msa1429850:CDS | 30.0% |
| AAGTTACGGGATTATAAAAG+AGG | + | tig0026572:39452-39471 | None:intergenic | 30.0% | |
| CAGATAAGGAATTAAGTTAC+GGG | + | tig0026572:39465-39484 | None:intergenic | 30.0% | |
| GCAGATAAGGAATTAAGTTA+CGG | + | tig0026572:39466-39485 | None:intergenic | 30.0% | |
| TATCTAGTCCACTTGATTTA+AGG | - | tig0026572:39574-39593 | Msa1429850:intron | 30.0% | |
| GGAATAAACCTTAAATCAAG+TGG | + | tig0026572:39585-39604 | None:intergenic | 30.0% | |
| TAAGGTTTATTCCTGACATT+TGG | - | tig0026572:39592-39611 | Msa1429850:intron | 30.0% | |
| AAGGTTTATTCCTGACATTT+GGG | - | tig0026572:39593-39612 | Msa1429850:intron | 30.0% | |
| ! | AACTACGTAGTCAAAGATTT+TGG | - | tig0026572:39735-39754 | Msa1429850:intron | 30.0% |
| !!! | TAAAGTTGATTTTGATTGGG+AGG | - | tig0026572:39779-39798 | Msa1429850:intron | 30.0% |
| AAGAAAATTTACTGATGAGC+AGG | - | tig0026572:39833-39852 | Msa1429850:intron | 30.0% | |
| ATCAAGTTTAACATAGGCTA+GGG | + | tig0026572:39868-39887 | None:intergenic | 30.0% | |
| !! | TCTTTGTTTCTGAAGACAAT+AGG | - | tig0026572:39980-39999 | Msa1429850:intron | 30.0% |
| GAAAGCTGGTAAAACTATAT+TGG | - | tig0026572:40184-40203 | Msa1429850:intron | 30.0% | |
| AGTTAGTTGTGGCTAAAATA+GGG | + | tig0026572:40364-40383 | None:intergenic | 30.0% | |
| TAGTTAGTTGTGGCTAAAAT+AGG | + | tig0026572:40365-40384 | None:intergenic | 30.0% | |
| CTGATAGAGAGAAAATGAAA+AGG | + | tig0026572:40421-40440 | None:intergenic | 30.0% | |
| TTCTCCTTAATAGCTATTCA+TGG | - | tig0026572:40476-40495 | Msa1429850:intron | 30.0% | |
| TCTCCTTAATAGCTATTCAT+GGG | - | tig0026572:40477-40496 | Msa1429850:intron | 30.0% | |
| AAACCCATGAATAGCTATTA+AGG | + | tig0026572:40483-40502 | None:intergenic | 30.0% | |
| AAAAAAAGGAAAATGCTAGC+GGG | + | tig0026572:40654-40673 | None:intergenic | 30.0% | |
| ACCAAAATTATTGTATGGGA+GGG | + | tig0026572:40734-40753 | None:intergenic | 30.0% | |
| TACCAAAATTATTGTATGGG+AGG | + | tig0026572:40735-40754 | None:intergenic | 30.0% | |
| !! | TTAGGTTGAACATAATTTGG+TGG | - | tig0026572:40817-40836 | Msa1429850:intron | 30.0% |
| TAAAATCTTCTGCAAGTTGT+GGG | + | tig0026572:40909-40928 | None:intergenic | 30.0% | |
| ATAAAATCTTCTGCAAGTTG+TGG | + | tig0026572:40910-40929 | None:intergenic | 30.0% | |
| !! | TGTTAATTGCTTTTCCATTG+AGG | - | tig0026572:40981-41000 | Msa1429850:intron | 30.0% |
| ATTGGACCCTAATTCATATT+TGG | - | tig0026572:41173-41192 | Msa1429850:intron | 30.0% | |
| !! | TAGTACTTGTTATTCTGCAA+TGG | + | tig0026572:41225-41244 | None:intergenic | 30.0% |
| ATTGCAGAATAACAAGTACT+AGG | - | tig0026572:41224-41243 | Msa1429850:intron | 30.0% | |
| TTAACTATTACTCGTGAGAT+AGG | + | tig0026572:41290-41309 | None:intergenic | 30.0% | |
| AGAATGCATGTAAATTTGGA+TGG | + | tig0026572:41343-41362 | None:intergenic | 30.0% | |
| GTCAAGAATGCATGTAAATT+TGG | + | tig0026572:41347-41366 | None:intergenic | 30.0% | |
| CAACTATTATAGAATCACCA+AGG | + | tig0026572:41587-41606 | None:intergenic | 30.0% | |
| !! | TGATTTGGTAGTCAGATTAA+AGG | + | tig0026572:41787-41806 | None:intergenic | 30.0% |
| ! | AAAAATCGACAGAGTTGATT+TGG | + | tig0026572:41802-41821 | None:intergenic | 30.0% |
| CAGATGTATATCAAAGAAAG+TGG | - | tig0026572:41919-41938 | Msa1429850:intron | 30.0% | |
| AAGAATGCCTTTAAATTGGA+CGG | - | tig0026572:41985-42004 | Msa1429850:intron | 30.0% | |
| ATTGCAGAATAGTAAGAACT+AGG | + | tig0026572:42101-42120 | None:intergenic | 30.0% | |
| GTAGATTATTTCCTCATGAA+TGG | - | tig0026572:42306-42325 | Msa1429850:intron | 30.0% | |
| !! | CAATTGTTTTTCCATTCATG+AGG | + | tig0026572:42320-42339 | None:intergenic | 30.0% |
| ATGGAAAAACAATTGACACA+AGG | - | tig0026572:42325-42344 | Msa1429850:intron | 30.0% | |
| GTGAATAGTATGCTTAAACT+TGG | - | tig0026572:42390-42409 | Msa1429850:intron | 30.0% | |
| GAATAGTATGCTTAAACTTG+GGG | - | tig0026572:42392-42411 | Msa1429850:intron | 30.0% | |
| !!! | GTAGTTACTTTTCACAATTG+TGG | + | tig0026572:42544-42563 | None:intergenic | 30.0% |
| ! | TTTTTGTGAACCATGACTAA+GGG | + | tig0026572:42665-42684 | None:intergenic | 30.0% |
| !!! | TTTTTTGTGAACCATGACTA+AGG | + | tig0026572:42666-42685 | None:intergenic | 30.0% |
| AAAAAAGCTTGTGCTTTACT+AGG | - | tig0026572:42680-42699 | Msa1429850:intron | 30.0% | |
| AAAAAGCTTGTGCTTTACTA+GGG | - | tig0026572:42681-42700 | Msa1429850:intron | 30.0% | |
| TTAGGAAAAGATTTGTAAGC+TGG | + | tig0026572:42787-42806 | None:intergenic | 30.0% | |
| ! | ATTTCTTAATGGTGGAACAT+TGG | + | tig0026572:42815-42834 | None:intergenic | 30.0% |
| ! | AAACAACGACAAAAGGTATA+TGG | + | tig0026572:42864-42883 | None:intergenic | 30.0% |
| ! | AATGCAATTTCTTTTTGCGT+TGG | - | tig0026572:42892-42911 | Msa1429850:intron | 30.0% |
| TTATATGTATGTGCATGACA+TGG | + | tig0026572:42958-42977 | None:intergenic | 30.0% | |
| ATTTGAATGACAGAAGAAAC+CGG | - | tig0026572:43081-43100 | Msa1429850:intron | 30.0% | |
| ! | TATCTTAGTTTGGTCTATTC+AGG | - | tig0026572:43313-43332 | Msa1429850:intron | 30.0% |
| AAAAAAGGAAGGACAAAATG+GGG | - | tig0026572:43761-43780 | Msa1429850:intron | 30.0% | |
| GGAGAATGTTATTATTGATG+AGG | - | tig0026572:43786-43805 | Msa1429850:intron | 30.0% | |
| TCATCACTATATGTACTGTT+TGG | + | tig0026572:43820-43839 | None:intergenic | 30.0% | |
| !!! | CTTTTAAATTGTGGATTGGT+AGG | + | tig0026572:43889-43908 | None:intergenic | 30.0% |
| CTACCAATCCACAATTTAAA+AGG | - | tig0026572:43887-43906 | Msa1429850:CDS | 30.0% | |
| ! | TTGATGTTTTCATCAATGGT+GGG | + | tig0026572:44101-44120 | None:intergenic | 30.0% |
| ! | ATTGATGTTTTCATCAATGG+TGG | + | tig0026572:44102-44121 | None:intergenic | 30.0% |
| ACCATTGATGAAAACATCAA+TGG | - | tig0026572:44101-44120 | Msa1429850:intron | 30.0% | |
| ! | ACCATTGATGTTTTCATCAA+TGG | + | tig0026572:44105-44124 | None:intergenic | 30.0% |
| ! | CTTAAAAGGTGACTTTGAAA+TGG | - | tig0026572:44222-44241 | Msa1429850:CDS | 30.0% |
| ! | GTAATGCAAATGTCTTTTGA+TGG | - | tig0026572:44408-44427 | Msa1429850:CDS | 30.0% |
| ! | ATTTAGCATGGTGCTAAATA+AGG | + | tig0026572:44672-44691 | None:intergenic | 30.0% |
| ATTAGTGTGCATATTTAGCA+TGG | + | tig0026572:44684-44703 | None:intergenic | 30.0% | |
| AAGAAAAACAACGCAAGAAG+AGG | - | tig0026572:38063-38082 | Msa1429850:three_prime_UTR | 35.0% | |
| !! | GGCTCTAAAGAATGAAACAA+AGG | - | tig0026572:38145-38164 | Msa1429850:three_prime_UTR | 35.0% |
| !! | CAAAGTGAGGTTGTTTTCTA+TGG | + | tig0026572:38255-38274 | None:intergenic | 35.0% |
| GAAGAAGAAGAAGAAGAAGA+AGG | - | tig0026572:38308-38327 | Msa1429850:CDS | 35.0% | |
| AAGGTGTGTATGTTAAGAGT+TGG | - | tig0026572:38627-38646 | Msa1429850:intron | 35.0% | |
| AATTCATTTGTCCCAACGAA+TGG | - | tig0026572:38729-38748 | Msa1429850:intron | 35.0% | |
| GATTTGATCATTCCATTCGT+TGG | + | tig0026572:38744-38763 | None:intergenic | 35.0% | |
| AGTCAAATGGAACAAATCCA+CGG | + | tig0026572:38821-38840 | None:intergenic | 35.0% | |
| ! | CACTGCTTACCATGTATTTT+TGG | + | tig0026572:39206-39225 | None:intergenic | 35.0% |
| AAATACATGGTAAGCAGTGA+AGG | - | tig0026572:39207-39226 | Msa1429850:CDS | 35.0% | |
| CAGATAACAAATCTATGCTG+TGG | + | tig0026572:39307-39326 | None:intergenic | 35.0% | |
| TATAAAAGAGGAAAGCAGAG+AGG | + | tig0026572:39440-39459 | None:intergenic | 35.0% | |
| TGTTTGAATTCCCAAATGTC+AGG | + | tig0026572:39606-39625 | None:intergenic | 35.0% | |
| TGACATTTGGGAATTCAAAC+AGG | - | tig0026572:39605-39624 | Msa1429850:intron | 35.0% | |
| TTTAACTCCTTTCAATGCTC+AGG | - | tig0026572:39704-39723 | Msa1429850:intron | 35.0% | |
| CATCAAGTTTAACATAGGCT+AGG | + | tig0026572:39869-39888 | None:intergenic | 35.0% | |
| CTAGCCTATGTTAAACTTGA+TGG | - | tig0026572:39867-39886 | Msa1429850:intron | 35.0% | |
| GAAACAAAGACCTGATATCA+TGG | + | tig0026572:39970-39989 | None:intergenic | 35.0% | |
| GCTTTCTTATGTCTAGTCAA+TGG | + | tig0026572:40170-40189 | None:intergenic | 35.0% | |
| TTGACTAGACATAAGAAAGC+TGG | - | tig0026572:40170-40189 | Msa1429850:intron | 35.0% | |
| TTGGAATGAATAAACTCCCA+CGG | - | tig0026572:40203-40222 | Msa1429850:intron | 35.0% | |
| ! | TTTTCCTTACTACAAGCTTG+AGG | + | tig0026572:40541-40560 | None:intergenic | 35.0% |
| GTAGTAAGGAAAATGCTACT+CGG | - | tig0026572:40548-40567 | Msa1429850:intron | 35.0% | |
| AAAAAAGGAAAATGCTAGCG+GGG | + | tig0026572:40653-40672 | None:intergenic | 35.0% | |
| CAAAATTATTGTATGGGAGG+GGG | + | tig0026572:40732-40751 | None:intergenic | 35.0% | |
| CCAAAATTATTGTATGGGAG+GGG | + | tig0026572:40733-40752 | None:intergenic | 35.0% | |
| AGGATTAGACACATCAAATG+TGG | - | tig0026572:40788-40807 | Msa1429850:intron | 35.0% | |
| CATCAAATGTGGACCTTATT+AGG | - | tig0026572:40799-40818 | Msa1429850:intron | 35.0% | |
| !! | AACACAGACTAAGCTTTGAA+TGG | + | tig0026572:40965-40984 | None:intergenic | 35.0% |
| !! | TAATTGCTTTTCCATTGAGG+AGG | - | tig0026572:40984-41003 | Msa1429850:intron | 35.0% |
| GCTTCGATTGACACAATTAT+TGG | - | tig0026572:41155-41174 | Msa1429850:intron | 35.0% | |
| ! | TGTTACTTATCACGTTTCTG+AGG | - | tig0026572:41249-41268 | Msa1429850:intron | 35.0% |
| GTTACTTATCACGTTTCTGA+GGG | - | tig0026572:41250-41269 | Msa1429850:intron | 35.0% | |
| TGATGAATTAGCAAGTGTGA+TGG | + | tig0026572:41384-41403 | None:intergenic | 35.0% | |
| TGCATATTCTTCGACAACAT+AGG | - | tig0026572:41417-41436 | Msa1429850:intron | 35.0% | |
| GGTAGTTGTTCAATATCTTC+TGG | - | tig0026572:41438-41457 | Msa1429850:intron | 35.0% | |
| AGTTGTTCAATATCTTCTGG+CGG | - | tig0026572:41441-41460 | Msa1429850:intron | 35.0% | |
| !!! | CGATTTTATACTTGGGTTGA+AGG | - | tig0026572:41539-41558 | Msa1429850:intron | 35.0% |
| TTATAGAATCACCAAGGTTG+TGG | + | tig0026572:41581-41600 | None:intergenic | 35.0% | |
| TTGGATTCTATAGCGGTTTA+TGG | + | tig0026572:41668-41687 | None:intergenic | 35.0% | |
| ! | ATCGGGTTATCACCTTTTAT+AGG | - | tig0026572:41729-41748 | Msa1429850:intron | 35.0% |
| TAAGGAACCGTCCAATTTAA+AGG | + | tig0026572:41995-42014 | None:intergenic | 35.0% | |
| CTGTAACATCACATTTCCAA+GGG | + | tig0026572:42077-42096 | None:intergenic | 35.0% | |
| TCTGTAACATCACATTTCCA+AGG | + | tig0026572:42078-42097 | None:intergenic | 35.0% | |
| !! | ACTAAGCTTTGAATGGATCA+TGG | - | tig0026572:42348-42367 | Msa1429850:intron | 35.0% |
| AAGCATACTATTCACACAAG+TGG | + | tig0026572:42385-42404 | None:intergenic | 35.0% | |
| GGGTAAATCTTCTTCAAGAT+GGG | - | tig0026572:42412-42431 | Msa1429850:intron | 35.0% | |
| GGTAAATCTTCTTCAAGATG+GGG | - | tig0026572:42413-42432 | Msa1429850:intron | 35.0% | |
| CCTTGAAAGATTAAGGAAAG+AGG | + | tig0026572:42638-42657 | None:intergenic | 35.0% | |
| CCTCTTTCCTTAATCTTTCA+AGG | - | tig0026572:42635-42654 | Msa1429850:intron | 35.0% | |
| AAAAGCTTGTGCTTTACTAG+GGG | - | tig0026572:42682-42701 | Msa1429850:intron | 35.0% | |
| CCATTAAATTGGAGAAACGA+GGG | + | tig0026572:42730-42749 | None:intergenic | 35.0% | |
| TCCATTAAATTGGAGAAACG+AGG | + | tig0026572:42731-42750 | None:intergenic | 35.0% | |
| AAAATTAGGCTCAATATCCC+CGG | - | tig0026572:42759-42778 | Msa1429850:intron | 35.0% | |
| ! | AAAGATTTGTAAGCTGGTTC+CGG | + | tig0026572:42781-42800 | None:intergenic | 35.0% |
| TTACAGATATAGATCACTGG+AGG | + | tig0026572:42931-42950 | None:intergenic | 35.0% | |
| TTTGAATGACAGAAGAAACC+GGG | - | tig0026572:43082-43101 | Msa1429850:intron | 35.0% | |
| ATGAGTATATGAATGCTTCC+CGG | + | tig0026572:43103-43122 | None:intergenic | 35.0% | |
| AGCAAGCTATTAAAGCAGAA+GGG | + | tig0026572:43191-43210 | None:intergenic | 35.0% | |
| GTTGGAATGGAAAGAATACT+TGG | - | tig0026572:43213-43232 | Msa1429850:CDS | 35.0% | |
| TTAGACATTCCAATCCTGAA+TGG | + | tig0026572:43396-43415 | None:intergenic | 35.0% | |
| !! | AAACAGTTTGGGAAGCATTT+CGG | - | tig0026572:43452-43471 | Msa1429850:intron | 35.0% |
| AGCAGATGAATTCTTCATTG+AGG | - | tig0026572:43561-43580 | Msa1429850:intron | 35.0% | |
| ACATAATAACCTCCAACGTA+TGG | - | tig0026572:43636-43655 | Msa1429850:intron | 35.0% | |
| TTTATCGCTTCACACCTATT+TGG | - | tig0026572:44037-44056 | Msa1429850:CDS | 35.0% | |
| ATAGAAAAGCCGAACCAAAT+AGG | + | tig0026572:44054-44073 | None:intergenic | 35.0% | |
| GACTCAAATCCATTCATAAC+TGG | - | tig0026572:44166-44185 | Msa1429850:CDS | 35.0% | |
| ATGCAGAAGGATAAGAAAGA+AGG | - | tig0026572:44435-44454 | Msa1429850:CDS | 35.0% | |
| GAAGGATAAGAAAGAAGGAT+TGG | - | tig0026572:44440-44459 | Msa1429850:CDS | 35.0% | |
| ! | ATCAGTGATCCTCGTTTTGT+AGG | - | tig0026572:38095-38114 | Msa1429850:three_prime_UTR | 40.0% |
| AGAAGAAGAAGAAGGAGAAC+AGG | - | tig0026572:38319-38338 | Msa1429850:CDS | 40.0% | |
| GAAGAAGAAGAAGGAGAACA+GGG | - | tig0026572:38320-38339 | Msa1429850:CDS | 40.0% | |
| TGAGAAAGATACTCATAGGC+TGG | - | tig0026572:38575-38594 | Msa1429850:intron | 40.0% | |
| GAACACTGCATACAAGTCAA+CGG | + | tig0026572:38709-38728 | None:intergenic | 40.0% | |
| CTGTCTATCCAACTGAGTTT+GGG | - | tig0026572:38769-38788 | Msa1429850:intron | 40.0% | |
| ACTTTAGCTGTATGCCATTC+AGG | + | tig0026572:38956-38975 | None:intergenic | 40.0% | |
| TTTGTAAATGTGAGCTGCTG+TGG | + | tig0026572:39532-39551 | None:intergenic | 40.0% | |
| ATGATGATCCCTTTCGCAAA+AGG | - | tig0026572:39802-39821 | Msa1429850:intron | 40.0% | |
| ! | CTCAAGATCCTTTTGCGAAA+GGG | + | tig0026572:39813-39832 | None:intergenic | 40.0% |
| ! | TCTCAAGATCCTTTTGCGAA+AGG | + | tig0026572:39814-39833 | None:intergenic | 40.0% |
| CAATAGGAAATGCAGAAGCA+AGG | - | tig0026572:39996-40015 | Msa1429850:intron | 40.0% | |
| TGCAGAAGCAAGGAAAAACA+TGG | - | tig0026572:40006-40025 | Msa1429850:intron | 40.0% | |
| AAGCAAGGAAAAACATGGTC+TGG | - | tig0026572:40011-40030 | Msa1429850:intron | 40.0% | |
| AGCAAGGAAAAACATGGTCT+GGG | - | tig0026572:40012-40031 | Msa1429850:intron | 40.0% | |
| AACTGAATCACACACCAACT+AGG | - | tig0026572:40122-40141 | Msa1429850:intron | 40.0% | |
| AACTAGTATCAGAGCCTAGT+TGG | + | tig0026572:40139-40158 | None:intergenic | 40.0% | |
| ! | TAGGCTCTGATACTAGTTGA+TGG | - | tig0026572:40141-40160 | Msa1429850:intron | 40.0% |
| ! | AGGCTCTGATACTAGTTGAT+GGG | - | tig0026572:40142-40161 | Msa1429850:intron | 40.0% |
| AATGAATAAACTCCCACGGT+AGG | - | tig0026572:40207-40226 | Msa1429850:intron | 40.0% | |
| ! | TGAGGACAAAGTGTCTCATT+AGG | + | tig0026572:40523-40542 | None:intergenic | 40.0% |
| TTGTCCTCAAGCTTGTAGTA+AGG | - | tig0026572:40534-40553 | Msa1429850:intron | 40.0% | |
| GGACATCTAAGAGTTTGAGT+AGG | - | tig0026572:40602-40621 | Msa1429850:intron | 40.0% | |
| TAAGAGTTTGAGTAGGTCCA+GGG | - | tig0026572:40609-40628 | Msa1429850:intron | 40.0% | |
| ! | CCCCTCCCATACAATAATTT+TGG | - | tig0026572:40730-40749 | Msa1429850:intron | 40.0% |
| ! | GGTTGAACATAATTTGGTGG+TGG | - | tig0026572:40820-40839 | Msa1429850:intron | 40.0% |
| CAAGTAGATTTCCTCCTCAA+TGG | + | tig0026572:40998-41017 | None:intergenic | 40.0% | |
| CATTGAGGAGGAAATCTACT+TGG | - | tig0026572:40996-41015 | Msa1429850:intron | 40.0% | |
| GAGGAAATCTACTTGGTTGA+GGG | - | tig0026572:41003-41022 | Msa1429850:intron | 40.0% | |
| ACAACAGAAGCTCCATATTC+AGG | - | tig0026572:41128-41147 | Msa1429850:intron | 40.0% | |
| TTCTGGCGGAGTTTCAATAT+TGG | - | tig0026572:41455-41474 | Msa1429850:intron | 40.0% | |
| AAGTGCATAATCAATCCCTC+AGG | - | tig0026572:41479-41498 | Msa1429850:intron | 40.0% | |
| AGGGAAATGTAAATCCGACT+GGG | + | tig0026572:41621-41640 | None:intergenic | 40.0% | |
| AAGGGAAATGTAAATCCGAC+TGG | + | tig0026572:41622-41641 | None:intergenic | 40.0% | |
| TTTATGGCACTGCATAGAGA+AGG | + | tig0026572:41652-41671 | None:intergenic | 40.0% | |
| !! | CGAAGTGTTGGATTCTATAG+CGG | + | tig0026572:41675-41694 | None:intergenic | 40.0% |
| CGCTATAGAATCCAACACTT+CGG | - | tig0026572:41673-41692 | Msa1429850:intron | 40.0% | |
| GCTATAGAATCCAACACTTC+GGG | - | tig0026572:41674-41693 | Msa1429850:intron | 40.0% | |
| TGATAACCCGATTCCACTTT+GGG | + | tig0026572:41721-41740 | None:intergenic | 40.0% | |
| AGTCAAACGCTCCACAAATT+TGG | + | tig0026572:41759-41778 | None:intergenic | 40.0% | |
| AAAATCAATCCCTCGAGAGA+GGG | + | tig0026572:41839-41858 | None:intergenic | 40.0% | |
| AAGTGGGATGATGAACTATC+AGG | - | tig0026572:41936-41955 | Msa1429850:intron | 40.0% | |
| !! | CACAAGGACTAAGCTTTGAA+TGG | - | tig0026572:42341-42360 | Msa1429850:intron | 40.0% |
| GGGGTAAATCTTCTTCAAGA+TGG | - | tig0026572:42411-42430 | Msa1429850:intron | 40.0% | |
| TTATGTTGTTGCATCCATGC+TGG | - | tig0026572:42478-42497 | Msa1429850:intron | 40.0% | |
| AGAATACAAGAAGCTGCTAG+TGG | + | tig0026572:42607-42626 | None:intergenic | 40.0% | |
| CCCTCGTTTCTCCAATTTAA+TGG | - | tig0026572:42727-42746 | Msa1429850:intron | 40.0% | |
| ! | AAGATTTGTAAGCTGGTTCC+GGG | + | tig0026572:42780-42799 | None:intergenic | 40.0% |
| ! | CAAAAGGTATATGGCACACA+AGG | + | tig0026572:42855-42874 | None:intergenic | 40.0% |
| GAGCAAGCTATTAAAGCAGA+AGG | + | tig0026572:43192-43211 | None:intergenic | 40.0% | |
| !! | GCTTTAATAGCTTGCTCAGT+TGG | - | tig0026572:43195-43214 | Msa1429850:CDS | 40.0% |
| !! | AATAGCTTGCTCAGTTGGAA+TGG | - | tig0026572:43200-43219 | Msa1429850:CDS | 40.0% |
| TAACAGTGAGACTGATGATC+AGG | - | tig0026572:43261-43280 | Msa1429850:CDS | 40.0% | |
| !! | TGATGATCAGGTTGATGAGA+AGG | - | tig0026572:43273-43292 | Msa1429850:CDS | 40.0% |
| AGTTTGGTCTATTCAGGCAA+TGG | - | tig0026572:43319-43338 | Msa1429850:intron | 40.0% | |
| ACATTCCAATCCTGAATGGA+AGG | + | tig0026572:43392-43411 | None:intergenic | 40.0% | |
| TTCTTCCTCTTCTTAGCACA+AGG | + | tig0026572:43589-43608 | None:intergenic | 40.0% | |
| ! | AGAAGAGGAAGAAAGCACAA+AGG | - | tig0026572:43596-43615 | Msa1429850:intron | 40.0% |
| ! | TATTGCTTGCTGATGACAAG+AGG | - | tig0026572:43701-43720 | Msa1429850:intron | 40.0% |
| GATGACAAGAGGATAGAAAC+TGG | - | tig0026572:43712-43731 | Msa1429850:intron | 40.0% | |
| ! | AGGATAGAAACTGGTCTCAA+GGG | - | tig0026572:43721-43740 | Msa1429850:intron | 40.0% |
| ! | AAAAGAAGCGCAACAAAACG+TGG | + | tig0026572:43844-43863 | None:intergenic | 40.0% |
| GTAGGATCAATAGCATAGTC+AGG | + | tig0026572:43871-43890 | None:intergenic | 40.0% | |
| !! | ATGTTTTCATCAATGGTGGG+TGG | + | tig0026572:44098-44117 | None:intergenic | 40.0% |
| CCATAACAGCCAGTTATGAA+TGG | + | tig0026572:44178-44197 | None:intergenic | 40.0% | |
| CCATTCATAACTGGCTGTTA+TGG | - | tig0026572:44175-44194 | Msa1429850:CDS | 40.0% | |
| !! | TTTTGATGGCATGATGCAGA+AGG | - | tig0026572:44422-44441 | Msa1429850:CDS | 40.0% |
| CAAAGCAGATCCAATCAAGA+TGG | - | tig0026572:44529-44548 | Msa1429850:CDS | 40.0% | |
| ! | AGCATGGTGCTAAATAAGGA+AGG | + | tig0026572:44668-44687 | None:intergenic | 40.0% |
| TTAGAGCCTCTCGAAAACGA+GGG | + | tig0026572:38133-38152 | None:intergenic | 45.0% | |
| ! | TTTAGAGCCTCTCGAAAACG+AGG | + | tig0026572:38134-38153 | None:intergenic | 45.0% |
| AGAAGGAGAACAGGGATTGA+TGG | - | tig0026572:38328-38347 | Msa1429850:CDS | 45.0% | |
| TACTGACACGCTTGATATGC+AGG | - | tig0026572:38427-38446 | Msa1429850:CDS | 45.0% | |
| TCAAGATGTCTAGTCTCGTC+TGG | - | tig0026572:38468-38487 | Msa1429850:intron | 45.0% | |
| !! | CATGGACTGGAACTATGTGA+AGG | - | tig0026572:38608-38627 | Msa1429850:intron | 45.0% |
| GCTGTCTATCCAACTGAGTT+TGG | - | tig0026572:38768-38787 | Msa1429850:intron | 45.0% | |
| TGGGCTTCAACGTATGAAAG+AGG | - | tig0026572:38788-38807 | Msa1429850:intron | 45.0% | |
| ATGAAAGAGGAGAATAGCCG+TGG | - | tig0026572:38801-38820 | Msa1429850:intron | 45.0% | |
| ! | AAAGCAGAGAGGTGCACATA+TGG | + | tig0026572:39429-39448 | None:intergenic | 45.0% |
| AATTCCTTATCTGCCTCTGC+AGG | - | tig0026572:39472-39491 | Msa1429850:CDS | 45.0% | |
| GGAATTCAAACAGGAGCCTA+GGG | - | tig0026572:39614-39633 | Msa1429850:intron | 45.0% | |
| ACCTTTGTCACAACATCCCT+AGG | + | tig0026572:39633-39652 | None:intergenic | 45.0% | |
| TCTTTGACTACGTAGTTCGC+AGG | + | tig0026572:39732-39751 | None:intergenic | 45.0% | |
| ! | TTACTGTGCTGAAGTACTCG+AGG | + | tig0026572:39762-39781 | None:intergenic | 45.0% |
| ! | ATATCATGGTGATGCAAGCC+TGG | + | tig0026572:39956-39975 | None:intergenic | 45.0% |
| GCTTGCATCACCATGATATC+AGG | - | tig0026572:39957-39976 | Msa1429850:intron | 45.0% | |
| GGGAAATTTGAGAGTCTCTC+CGG | - | tig0026572:40032-40051 | Msa1429850:intron | 45.0% | |
| TGTGTGATTCAGTTGCTAGG+GGG | + | tig0026572:40116-40135 | None:intergenic | 45.0% | |
| GTGTGTGATTCAGTTGCTAG+GGG | + | tig0026572:40117-40136 | None:intergenic | 45.0% | |
| GGTGTGTGATTCAGTTGCTA+GGG | + | tig0026572:40118-40137 | None:intergenic | 45.0% | |
| TGGTGTGTGATTCAGTTGCT+AGG | + | tig0026572:40119-40138 | None:intergenic | 45.0% | |
| GGTAGGTATTCGAGAGACTT+TGG | - | tig0026572:40224-40243 | Msa1429850:intron | 45.0% | |
| GGACTCTCCTAATGCCAAAA+AGG | - | tig0026572:40245-40264 | Msa1429850:intron | 45.0% | |
| ! | GTATAGACTTGGGGCCTTTT+TGG | + | tig0026572:40262-40281 | None:intergenic | 45.0% |
| ! | GAAAGATGTGACGTGATGGA+TGG | + | tig0026572:40459-40478 | None:intergenic | 45.0% |
| AGGAGAAAGATGTGACGTGA+TGG | + | tig0026572:40463-40482 | None:intergenic | 45.0% | |
| CTAAGAGTTTGAGTAGGTCC+AGG | - | tig0026572:40608-40627 | Msa1429850:intron | 45.0% | |
| !! | CATAATTTGGTGGTGGATGC+TGG | - | tig0026572:40827-40846 | Msa1429850:intron | 45.0% |
| CAAGTTGTGGGTCTGTTCAA+TGG | + | tig0026572:40897-40916 | None:intergenic | 45.0% | |
| GGAGGAAATCTACTTGGTTG+AGG | - | tig0026572:41002-41021 | Msa1429850:intron | 45.0% | |
| AGAAGCTCCATATTCAGGCT+TGG | - | tig0026572:41133-41152 | Msa1429850:intron | 45.0% | |
| ATCGAAGCCAAGCCTGAATA+TGG | + | tig0026572:41143-41162 | None:intergenic | 45.0% | |
| TAATCAATCCCTCAGGAGAC+AGG | - | tig0026572:41486-41505 | Msa1429850:intron | 45.0% | |
| AATCAATCCCTCAGGAGACA+GGG | - | tig0026572:41487-41506 | Msa1429850:intron | 45.0% | |
| ! | CATAGAGAAGGTGCGTTGAA+GGG | + | tig0026572:41640-41659 | None:intergenic | 45.0% |
| ! | AACACTTCGGGTGCTTTGAA+GGG | - | tig0026572:41686-41705 | Msa1429850:intron | 45.0% |
| GTGTAAGCCCAAAGTGGAAT+CGG | - | tig0026572:41711-41730 | Msa1429850:intron | 45.0% | |
| TGTAAGCCCAAAGTGGAATC+GGG | - | tig0026572:41712-41731 | Msa1429850:intron | 45.0% | |
| GTGATAACCCGATTCCACTT+TGG | + | tig0026572:41722-41741 | None:intergenic | 45.0% | |
| CAAAATCAATCCCTCGAGAG+AGG | + | tig0026572:41840-41859 | None:intergenic | 45.0% | |
| ! | TCACATTTCCAAGGGTGTAG+TGG | + | tig0026572:42069-42088 | None:intergenic | 45.0% |
| TTCACACAAGTGGTCATCTG+TGG | + | tig0026572:42375-42394 | None:intergenic | 45.0% | |
| TCAAGATGGGGTCAGTTCAA+TGG | - | tig0026572:42425-42444 | Msa1429850:intron | 45.0% | |
| ACAAGAAGCTGCTAGTGGAA+TGG | + | tig0026572:42602-42621 | None:intergenic | 45.0% | |
| GGGAAGGCCTTGAAAGATTA+AGG | + | tig0026572:42645-42664 | None:intergenic | 45.0% | |
| TGTGAACCATGACTAAGGGA+AGG | + | tig0026572:42661-42680 | None:intergenic | 45.0% | |
| ! | AGGGCGTAAGATGTTTCTGA+GGG | + | tig0026572:42711-42730 | None:intergenic | 45.0% |
| ! | AGATTTGTAAGCTGGTTCCG+GGG | + | tig0026572:42779-42798 | None:intergenic | 45.0% |
| ! | GGTGGAACATTGGTAGTCTT+AGG | + | tig0026572:42805-42824 | None:intergenic | 45.0% |
| GGTATATGGCACACAAGGAA+TGG | + | tig0026572:42850-42869 | None:intergenic | 45.0% | |
| GTTATTCGCGCACTAAAGCA+TGG | + | tig0026572:43008-43027 | None:intergenic | 45.0% | |
| GAAGATGCTGAACATGACGT+TGG | - | tig0026572:43349-43368 | Msa1429850:intron | 45.0% | |
| AGGAACCTTGTGCTAAGAAG+AGG | - | tig0026572:43581-43600 | Msa1429850:intron | 45.0% | |
| TAACCTCCAACGTATGGACA+TGG | - | tig0026572:43642-43661 | Msa1429850:intron | 45.0% | |
| ! | GAGGATAGAAACTGGTCTCA+AGG | - | tig0026572:43720-43739 | Msa1429850:intron | 45.0% |
| AAGGAAGGACAAAATGGGGA+AGG | - | tig0026572:43765-43784 | Msa1429850:intron | 45.0% | |
| CGCTTCACACCTATTTGGTT+CGG | - | tig0026572:44042-44061 | Msa1429850:CDS | 45.0% | |
| !! | TCAGAAGTGCTGCATATGTC+AGG | - | tig0026572:44334-44353 | Msa1429850:intron | 45.0% |
| ACACAAGCAGAAGGGTCAAA+TGG | - | tig0026572:44368-44387 | Msa1429850:CDS | 45.0% | |
| CCTTGTCTGACCATCTTGAT+TGG | + | tig0026572:44542-44561 | None:intergenic | 45.0% | |
| CCAATCAAGATGGTCAGACA+AGG | - | tig0026572:44539-44558 | Msa1429850:CDS | 45.0% | |
| GATGGTCAGACAAGGAAAGA+TGG | - | tig0026572:44547-44566 | Msa1429850:CDS | 45.0% | |
| TCCACATCGTAGATATGGCT+GGG | + | tig0026572:44643-44662 | None:intergenic | 45.0% | |
| AGGAGTCCACATCGTAGATA+TGG | + | tig0026572:44648-44667 | None:intergenic | 45.0% | |
| !!! | ATAATCTAAAATTTAAAAAA+AGG | - | tig0026572:43746-43765 | Msa1429850:intron | 5.0% |
| GTGTGCACTCCTACAAAACG+AGG | + | tig0026572:38107-38126 | None:intergenic | 50.0% | |
| TCTGCACCAATCGACAAGAG+AGG | - | tig0026572:38224-38243 | Msa1429850:CDS | 50.0% | |
| AGGAGAACAGGGATTGATGG+AGG | - | tig0026572:38331-38350 | Msa1429850:CDS | 50.0% | |
| ! | TAGGCTGGCTGTTGTCAACA+TGG | - | tig0026572:38590-38609 | Msa1429850:intron | 50.0% |
| TGGCTGTTGTCAACATGGAC+TGG | - | tig0026572:38595-38614 | Msa1429850:intron | 50.0% | |
| CGTTGAAGCCCAAACTCAGT+TGG | + | tig0026572:38780-38799 | None:intergenic | 50.0% | |
| CCTATCAGAAGAGCAGGATG+CGG | - | tig0026572:38886-38905 | Msa1429850:CDS | 50.0% | |
| CACGGCACGAGTCAATTTCA+TGG | + | tig0026572:38924-38943 | None:intergenic | 50.0% | |
| AGAACCTGCAGAGGCAGATA+AGG | + | tig0026572:39479-39498 | None:intergenic | 50.0% | |
| CAGCATGATAGAACCTGCAG+AGG | + | tig0026572:39488-39507 | None:intergenic | 50.0% | |
| CTGCAGGTTCTATCATGCTG+TGG | - | tig0026572:39488-39507 | Msa1429850:CDS | 50.0% | |
| CAGGTTCTATCATGCTGTGG+TGG | - | tig0026572:39491-39510 | Msa1429850:CDS | 50.0% | |
| GGGAATTCAAACAGGAGCCT+AGG | - | tig0026572:39613-39632 | Msa1429850:intron | 50.0% | |
| GCCTAGGGATGTTGTGACAA+AGG | - | tig0026572:39629-39648 | Msa1429850:intron | 50.0% | |
| !! | GCAGGTACCTGAGCATTGAA+AGG | + | tig0026572:39714-39733 | None:intergenic | 50.0% |
| TGAGTGGAAACTGCGGAGTT+AGG | + | tig0026572:40078-40097 | None:intergenic | 50.0% | |
| GAGTGAGTGAGTGGAAACTG+CGG | + | tig0026572:40085-40104 | None:intergenic | 50.0% | |
| GTATCTGGTGAGTGAGTGAG+TGG | + | tig0026572:40094-40113 | None:intergenic | 50.0% | |
| !! | TTCAGTTGCTAGGGGGTATC+TGG | + | tig0026572:40109-40128 | None:intergenic | 50.0% |
| GTCTCTCGAATACCTACCGT+GGG | + | tig0026572:40222-40241 | None:intergenic | 50.0% | |
| AGTCTCTCGAATACCTACCG+TGG | + | tig0026572:40223-40242 | None:intergenic | 50.0% | |
| !! | CTTGGGGCCTTTTTGGCATT+AGG | + | tig0026572:40255-40274 | None:intergenic | 50.0% |
| AAATGCTACTCGGCCCATGT+AGG | - | tig0026572:40558-40577 | Msa1429850:intron | 50.0% | |
| ACCAACCGAGCTACCTACAT+GGG | + | tig0026572:40574-40593 | None:intergenic | 50.0% | |
| !! | TAGCTCGGTTGGTGAGCTAA+GGG | - | tig0026572:40581-40600 | Msa1429850:intron | 50.0% |
| AGGGGAAATGGATAGAACCC+TGG | + | tig0026572:40629-40648 | None:intergenic | 50.0% | |
| AGGAAAATGCTAGCGGGGAA+GGG | + | tig0026572:40648-40667 | None:intergenic | 50.0% | |
| AAGGAAAATGCTAGCGGGGA+AGG | + | tig0026572:40649-40668 | None:intergenic | 50.0% | |
| ! | TTGATGACCTGCATCCCAGT+CGG | - | tig0026572:41604-41623 | Msa1429850:intron | 50.0% |
| TGTAAATCCGACTGGGATGC+AGG | + | tig0026572:41614-41633 | None:intergenic | 50.0% | |
| ! | GCATAGAGAAGGTGCGTTGA+AGG | + | tig0026572:41641-41660 | None:intergenic | 50.0% |
| ! | CTTCAAAGCACCCGAAGTGT+TGG | + | tig0026572:41687-41706 | None:intergenic | 50.0% |
| CAACACTTCGGGTGCTTTGA+AGG | - | tig0026572:41685-41704 | Msa1429850:intron | 50.0% | |
| ! | AGGGAAGTGTAAGCCCAAAG+TGG | - | tig0026572:41705-41724 | Msa1429850:intron | 50.0% |
| GGAAAGATCCACTACACCCT+TGG | - | tig0026572:42058-42077 | Msa1429850:intron | 50.0% | |
| TCAAGGCCTTCCCTTAGTCA+TGG | - | tig0026572:42652-42671 | Msa1429850:intron | 50.0% | |
| ! | GAGGGCGTAAGATGTTTCTG+AGG | + | tig0026572:42712-42731 | None:intergenic | 50.0% |
| ACATGACGTTGGCCAAGAGA+TGG | - | tig0026572:43360-43379 | Msa1429850:intron | 50.0% | |
| ATGGAGGTGACCTTCCATTC+AGG | - | tig0026572:43379-43398 | Msa1429850:intron | 50.0% | |
| GGTGACCTTCCATTCAGGAT+TGG | - | tig0026572:43384-43403 | Msa1429850:intron | 50.0% | |
| !! | CAGTTTGGGAAGCATTTCGG+AGG | - | tig0026572:43455-43474 | Msa1429850:intron | 50.0% |
| !! | GGGAAGCATTTCGGAGGAAA+AGG | - | tig0026572:43461-43480 | Msa1429850:intron | 50.0% |
| CAACCATGTCCATACGTTGG+AGG | + | tig0026572:43648-43667 | None:intergenic | 50.0% | |
| CAGCAACCATGTCCATACGT+TGG | + | tig0026572:43651-43670 | None:intergenic | 50.0% | |
| CAGCTAGCACACAAGCAGAA+GGG | - | tig0026572:44360-44379 | Msa1429850:CDS | 50.0% | |
| ATGGCTGGGGCATAATAGCA+TGG | + | tig0026572:44629-44648 | None:intergenic | 50.0% | |
| CCACATCGTAGATATGGCTG+GGG | + | tig0026572:44642-44661 | None:intergenic | 50.0% | |
| GTCCACATCGTAGATATGGC+TGG | + | tig0026572:44644-44663 | None:intergenic | 50.0% | |
| !! | CACAGACCCTCGTTTTCGAG+AGG | - | tig0026572:38124-38143 | Msa1429850:three_prime_UTR | 55.0% |
| CACCAATCGACAAGAGAGGC+AGG | - | tig0026572:38228-38247 | Msa1429850:CDS | 55.0% | |
| TGCGTGCCTATCAGAAGAGC+AGG | - | tig0026572:38880-38899 | Msa1429850:intron | 55.0% | |
| CCGCATCCTGCTCTTCTGAT+AGG | + | tig0026572:38889-38908 | None:intergenic | 55.0% | |
| CCATTCAGGCCAGTGTGTCA+CGG | + | tig0026572:38942-38961 | None:intergenic | 55.0% | |
| CACCAACCGAGCTACCTACA+TGG | + | tig0026572:40575-40594 | None:intergenic | 55.0% | |
| !! | GTAGCTCGGTTGGTGAGCTA+AGG | - | tig0026572:40580-40599 | Msa1429850:intron | 55.0% |
| GGAAAATGCTAGCGGGGAAG+GGG | + | tig0026572:40647-40666 | None:intergenic | 55.0% | |
| ! | AGGTTGTGGAGCGTTTGGCT+AGG | + | tig0026572:41567-41586 | None:intergenic | 55.0% |
| AGCCAAACGCTCCACAACCT+TGG | - | tig0026572:41567-41586 | Msa1429850:intron | 55.0% | |
| ! | CACCAAGGTTGTGGAGCGTT+TGG | + | tig0026572:41572-41591 | None:intergenic | 55.0% |
| TCTGCCTTTCCCTCTCTCGA+GGG | - | tig0026572:41827-41846 | Msa1429850:intron | 55.0% | |
| CAATCCCTCGAGAGAGGGAA+AGG | + | tig0026572:41834-41853 | None:intergenic | 55.0% | |
| TGACGTTGGCCAAGAGATGG+AGG | - | tig0026572:43363-43382 | Msa1429850:intron | 55.0% | |
| GGAAGGTCACCTCCATCTCT+TGG | + | tig0026572:43375-43394 | None:intergenic | 55.0% | |
| GCAGCTAGCACACAAGCAGA+AGG | - | tig0026572:44359-44378 | Msa1429850:CDS | 55.0% | |
| CCCCAGCCATATCTACGATG+TGG | - | tig0026572:44639-44658 | Msa1429850:CDS | 55.0% | |
| GGCCTGCCTCTCTTGTCGAT+TGG | + | tig0026572:38233-38252 | None:intergenic | 60.0% | |
| TGACTCGTGCCGTGACACAC+TGG | - | tig0026572:38930-38949 | Msa1429850:CDS | 60.0% | |
| ! | CCGTGACACACTGGCCTGAA+TGG | - | tig0026572:38939-38958 | Msa1429850:CDS | 60.0% |
| CTCGGCCCATGTAGGTAGCT+CGG | - | tig0026572:40566-40585 | Msa1429850:intron | 60.0% | |
| GCCCATGTAGGTAGCTCGGT+TGG | - | tig0026572:40570-40589 | Msa1429850:intron | 60.0% | |
| TGCTAGCGGGGAAGGGGAAA+TGG | + | tig0026572:40641-40660 | None:intergenic | 60.0% | |
| TGGCTCTCCCTGTCTCCTGA+GGG | + | tig0026572:41497-41516 | None:intergenic | 60.0% | |
| ATGGCTCTCCCTGTCTCCTG+AGG | + | tig0026572:41498-41517 | None:intergenic | 60.0% | |
| CTCTGCCTTTCCCTCTCTCG+AGG | - | tig0026572:41826-41845 | Msa1429850:intron | 60.0% | |
| ! | TGGTGGATGCTGCTCCAGCA+TGG | + | tig0026572:42495-42514 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026572 | gene | 38035 | 44759 | 38035 | ID=Msa1429850;Name=Msa1429850 |
| tig0026572 | mRNA | 38035 | 44759 | 38035 | ID=Msa1429850-mRNA-1;Parent=Msa1429850;Name=Msa1429850-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|1|0.71|1|1|1|7|157|649 |
| tig0026572 | exon | 38035 | 38456 | 38035 | ID=Msa1429850-mRNA-1:exon:6716;Parent=Msa1429850-mRNA-1 |
| tig0026572 | exon | 38886 | 39589 | 38886 | ID=Msa1429850-mRNA-1:exon:6715;Parent=Msa1429850-mRNA-1 |
| tig0026572 | exon | 42940 | 43068 | 42940 | ID=Msa1429850-mRNA-1:exon:6714;Parent=Msa1429850-mRNA-1 |
| tig0026572 | exon | 43144 | 43300 | 43144 | ID=Msa1429850-mRNA-1:exon:6713;Parent=Msa1429850-mRNA-1 |
| tig0026572 | exon | 43887 | 44089 | 43887 | ID=Msa1429850-mRNA-1:exon:6712;Parent=Msa1429850-mRNA-1 |
| tig0026572 | exon | 44165 | 44242 | 44165 | ID=Msa1429850-mRNA-1:exon:6711;Parent=Msa1429850-mRNA-1 |
| tig0026572 | exon | 44346 | 44759 | 44346 | ID=Msa1429850-mRNA-1:exon:6710;Parent=Msa1429850-mRNA-1 |
| tig0026572 | CDS | 44346 | 44759 | 44346 | ID=Msa1429850-mRNA-1:cds;Parent=Msa1429850-mRNA-1 |
| tig0026572 | CDS | 44165 | 44242 | 44165 | ID=Msa1429850-mRNA-1:cds;Parent=Msa1429850-mRNA-1 |
| tig0026572 | CDS | 43887 | 44089 | 43887 | ID=Msa1429850-mRNA-1:cds;Parent=Msa1429850-mRNA-1 |
| tig0026572 | CDS | 43144 | 43300 | 43144 | ID=Msa1429850-mRNA-1:cds;Parent=Msa1429850-mRNA-1 |
| tig0026572 | CDS | 42940 | 43068 | 42940 | ID=Msa1429850-mRNA-1:cds;Parent=Msa1429850-mRNA-1 |
| tig0026572 | CDS | 38886 | 39589 | 38886 | ID=Msa1429850-mRNA-1:cds;Parent=Msa1429850-mRNA-1 |
| tig0026572 | CDS | 38192 | 38456 | 38192 | ID=Msa1429850-mRNA-1:cds;Parent=Msa1429850-mRNA-1 |
| tig0026572 | three_prime_UTR | 38035 | 38191 | 38035 | ID=Msa1429850-mRNA-1:three_prime_utr;Parent=Msa1429850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
